AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89391

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89391.t1 MTR_3g436390 94.212 311 18 0 1 311 1 311 0.0 560
MS.gene89391.t1 MTR_3g436540 54.019 311 139 4 3 309 6 316 2.19e-117 348
MS.gene89391.t1 MTR_4g109470 43.911 271 131 7 45 302 40 302 3.39e-68 221
MS.gene89391.t1 MTR_3g025260 39.924 263 151 3 43 298 39 301 1.84e-64 211
MS.gene89391.t1 MTR_3g024520 39.739 307 177 5 11 309 6 312 3.67e-62 206
MS.gene89391.t1 MTR_3g025230 39.414 307 178 5 11 309 6 312 8.10e-62 204
MS.gene89391.t1 MTR_2g065360 35.507 276 170 5 31 301 2 274 1.72e-55 187
MS.gene89391.t1 MTR_8g091690 35.593 295 184 5 11 302 2 293 5.76e-55 186
MS.gene89391.t1 MTR_7g087520 33.101 287 182 3 31 307 32 318 1.71e-51 177
MS.gene89391.t1 MTR_8g020940 34.050 279 167 6 35 302 35 307 7.42e-51 176
MS.gene89391.t1 MTR_4g104610 33.010 309 190 6 17 311 8 313 1.78e-49 172
MS.gene89391.t1 MTR_8g020950 33.574 277 171 7 35 302 37 309 1.37e-48 169
MS.gene89391.t1 MTR_3g076530 33.893 298 179 9 18 302 14 306 3.80e-48 168
MS.gene89391.t1 MTR_5g070850 32.258 310 193 7 13 310 14 318 2.51e-47 166
MS.gene89391.t1 MTR_4g104550 35.315 286 172 6 33 311 25 304 8.60e-47 164
MS.gene89391.t1 MTR_5g470730 33.333 297 181 6 14 298 11 302 1.03e-46 163
MS.gene89391.t1 MTR_6g084770 32.087 321 199 8 1 309 1 314 2.67e-45 160
MS.gene89391.t1 MTR_5g070920 33.443 305 187 6 5 298 2 301 5.74e-45 160
MS.gene89391.t1 MTR_8g020960 31.935 310 201 6 1 302 1 308 5.92e-45 160
MS.gene89391.t1 MTR_1g097240 33.094 278 176 4 31 300 22 297 1.17e-44 159
MS.gene89391.t1 MTR_7g092620 34.646 254 162 3 17 267 13 265 2.35e-44 158
MS.gene89391.t1 MTR_4g089055 35.971 278 156 7 32 298 48 314 2.67e-44 158
MS.gene89391.t1 MTR_4g025950 29.091 275 190 5 30 299 23 297 1.23e-43 152
MS.gene89391.t1 MTR_4g089030 33.555 301 185 7 14 302 23 320 1.72e-43 156
MS.gene89391.t1 MTR_5g019010 30.769 299 186 9 13 297 10 301 2.23e-43 155
MS.gene89391.t1 MTR_5g070710 31.013 316 205 5 1 309 1 310 4.02e-43 155
MS.gene89391.t1 MTR_8g104080 35.019 257 146 5 13 264 11 251 6.03e-43 149
MS.gene89391.t1 MTR_5g070700 32.258 310 193 6 5 302 2 306 7.02e-43 154
MS.gene89391.t1 MTR_7g056103 31.190 311 200 8 13 310 9 318 1.34e-42 154
MS.gene89391.t1 MTR_5g073250 31.164 292 184 8 15 298 17 299 1.89e-42 153
MS.gene89391.t1 MTR_7g103450 32.955 264 167 4 24 277 29 292 2.78e-42 153
MS.gene89391.t1 MTR_3g020780 30.872 298 191 5 15 298 11 307 3.79e-42 152
MS.gene89391.t1 MTR_5g094520 32.765 293 182 9 13 297 44 329 7.54e-42 152
MS.gene89391.t1 MTR_5g045770 29.242 277 190 6 30 301 23 298 7.95e-42 151
MS.gene89391.t1 MTR_4g071710 30.599 317 189 8 6 298 3 312 8.21e-42 151
MS.gene89391.t1 MTR_3g057900 32.313 294 176 8 15 298 15 295 1.31e-41 150
MS.gene89391.t1 MTR_3g057970 33.788 293 173 9 14 298 10 289 1.93e-41 150
MS.gene89391.t1 MTR_6g462640 29.642 307 188 9 13 298 1 300 3.11e-41 150
MS.gene89391.t1 MTR_4g025980 28.521 284 198 5 30 309 24 306 3.42e-41 149
MS.gene89391.t1 MTR_4g089020 32.734 278 173 6 32 302 26 296 1.09e-40 148
MS.gene89391.t1 MTR_4g026050 28.283 297 203 7 14 301 3 298 1.11e-40 148
MS.gene89391.t1 MTR_4g089025 32.881 295 181 7 17 298 27 317 1.80e-40 148
MS.gene89391.t1 MTR_5g094540 31.650 297 179 10 17 297 10 298 1.84e-40 147
MS.gene89391.t1 MTR_5g023680 30.108 279 189 6 36 309 5 282 1.91e-40 147
MS.gene89391.t1 MTR_5g021390 31.741 293 173 8 23 298 30 312 1.96e-40 148
MS.gene89391.t1 MTR_4g025970 28.520 277 193 5 30 301 23 299 4.19e-40 147
MS.gene89391.t1 MTR_0181s0030 29.831 295 190 6 16 298 11 300 7.79e-40 146
MS.gene89391.t1 MTR_4g026070 28.866 291 193 7 13 298 14 295 8.94e-40 142
MS.gene89391.t1 MTR_5g073320 28.472 288 188 6 31 309 33 311 9.56e-40 145
MS.gene89391.t1 MTR_5g070690 30.693 303 193 5 11 301 6 303 1.50e-39 145
MS.gene89391.t1 MTR_5g070800 30.693 303 193 5 11 301 6 303 1.50e-39 145
MS.gene89391.t1 MTR_3g057980 30.690 290 178 7 19 298 19 295 1.58e-39 145
MS.gene89391.t1 MTR_3g058220 29.967 307 187 9 13 298 1 300 2.35e-39 145
MS.gene89391.t1 MTR_0554s0020 32.319 263 155 7 13 259 1 256 2.59e-39 144
MS.gene89391.t1 MTR_5g094840 31.613 310 190 10 1 298 6 305 4.27e-39 144
MS.gene89391.t1 MTR_3g058250 29.642 307 188 8 13 298 1 300 9.42e-39 143
MS.gene89391.t1 MTR_3g058390 29.568 301 192 8 15 302 11 304 9.60e-39 143
MS.gene89391.t1 MTR_8g076290 30.466 279 173 7 37 301 36 307 1.48e-38 142
MS.gene89391.t1 MTR_3g058240 30.909 275 169 9 36 298 1 266 1.88e-38 142
MS.gene89391.t1 MTR_3g057910 31.095 283 177 8 30 302 32 306 2.41e-38 142
MS.gene89391.t1 MTR_4g133750 30.592 304 178 9 16 297 5 297 2.50e-38 142
MS.gene89391.t1 MTR_0022s0290 32.542 295 179 8 34 313 39 328 4.47e-38 141
MS.gene89391.t1 MTR_0638s0020 32.117 274 139 5 31 301 2 231 1.20e-37 139
MS.gene89391.t1 MTR_5g094660 28.676 272 182 6 31 297 33 297 1.20e-37 140
MS.gene89391.t1 MTR_1g023730 28.819 288 187 7 29 298 23 310 1.45e-37 140
MS.gene89391.t1 MTR_4g026200 29.167 288 196 7 32 313 25 310 2.38e-37 139
MS.gene89391.t1 MTR_5g094550 30.035 283 174 8 17 284 10 283 3.23e-37 139
MS.gene89391.t1 MTR_3g058000 30.508 295 183 9 31 310 33 320 4.30e-37 139
MS.gene89391.t1 MTR_3g058210 30.769 286 179 9 25 298 24 302 4.57e-37 139
MS.gene89391.t1 MTR_4g088400 30.035 283 185 6 30 301 40 320 4.82e-37 139
MS.gene89391.t1 MTR_3g058400 30.195 308 186 10 13 298 1 301 6.37e-37 138
MS.gene89391.t1 MTR_7g012860 29.210 291 199 6 29 313 26 315 7.33e-37 138
MS.gene89391.t1 MTR_0287s0060 29.210 291 199 6 29 313 26 315 7.33e-37 138
MS.gene89391.t1 MTR_3g076560 29.000 300 196 7 10 298 21 314 8.79e-37 138
MS.gene89391.t1 MTR_4g048580 29.221 308 196 7 17 309 10 310 1.03e-36 137
MS.gene89391.t1 MTR_8g466180 30.671 313 185 11 14 307 10 309 1.36e-36 137
MS.gene89391.t1 MTR_1g035190 29.787 282 181 8 30 301 14 288 1.59e-36 137
MS.gene89391.t1 MTR_1g031700 32.787 244 154 5 22 261 18 255 1.84e-36 137
MS.gene89391.t1 MTR_0171s0020 30.303 297 193 7 15 298 11 306 2.78e-36 136
MS.gene89391.t1 MTR_5g094560 28.470 281 181 7 17 284 10 283 2.88e-36 136
MS.gene89391.t1 MTR_5g095290 30.935 278 175 7 31 301 36 303 3.35e-36 136
MS.gene89391.t1 MTR_1g442730 31.068 309 194 7 13 309 9 310 4.99e-36 135
MS.gene89391.t1 MTR_1g023720 28.723 282 185 6 33 298 29 310 6.83e-36 135
MS.gene89391.t1 MTR_3g058110 31.090 312 186 10 14 307 13 313 9.50e-36 135
MS.gene89391.t1 MTR_5g094570 29.730 296 186 8 17 297 10 298 1.19e-35 134
MS.gene89391.t1 MTR_1g023700 28.231 294 181 7 29 298 24 311 1.36e-35 134
MS.gene89391.t1 MTR_6g035100 33.460 263 144 8 13 259 10 257 1.68e-35 134
MS.gene89391.t1 MTR_4g102310 29.617 287 195 5 20 301 23 307 2.11e-35 134
MS.gene89391.t1 MTR_1g035140 28.710 310 201 8 13 309 9 311 2.14e-35 134
MS.gene89391.t1 MTR_7g012330 27.393 303 213 6 17 313 15 316 3.25e-35 133
MS.gene89391.t1 MTR_5g018990 30.182 275 172 9 36 297 35 302 3.65e-35 133
MS.gene89391.t1 MTR_5g073230 29.818 275 164 9 31 298 36 288 4.13e-35 133
MS.gene89391.t1 MTR_2g010530 31.330 233 148 5 30 258 28 252 4.91e-35 133
MS.gene89391.t1 MTR_6g008500 30.247 324 182 9 10 304 9 317 5.80e-35 133
MS.gene89391.t1 MTR_2g450040 31.317 281 174 7 13 278 16 292 1.32e-34 132
MS.gene89391.t1 MTR_5g072980 30.662 287 172 10 36 306 33 308 1.32e-34 132
MS.gene89391.t1 MTR_5g072930 30.662 287 172 10 36 306 33 308 1.32e-34 132
MS.gene89391.t1 MTR_4g104660 30.147 272 182 4 32 297 42 311 1.62e-34 132
MS.gene89391.t1 MTR_6g039630 32.319 263 158 8 14 267 10 261 3.61e-34 126
MS.gene89391.t1 MTR_1g103670 33.088 272 166 7 22 283 18 283 3.75e-34 130
MS.gene89391.t1 MTR_5g018980 30.466 279 171 8 35 297 33 304 3.80e-34 130
MS.gene89391.t1 MTR_3g058060 29.904 311 195 9 13 307 9 312 4.98e-34 131
MS.gene89391.t1 MTR_5g095260 30.132 302 162 9 30 306 35 312 6.15e-34 130
MS.gene89391.t1 MTR_5g070980 33.913 230 142 4 5 229 2 226 6.38e-34 124
MS.gene89391.t1 MTR_4g094772 30.662 287 190 5 27 310 24 304 9.71e-34 129
MS.gene89391.t1 MTR_5g016410 29.153 295 192 7 20 301 10 300 1.07e-33 129
MS.gene89391.t1 MTR_1g103680 32.971 276 169 7 16 283 17 284 1.14e-33 129
MS.gene89391.t1 MTR_4g104640 31.359 287 179 7 23 297 35 315 2.25e-33 128
MS.gene89391.t1 MTR_8g469300 30.196 255 169 5 52 298 51 304 2.40e-33 128
MS.gene89391.t1 MTR_3g057800 25.887 282 195 6 33 307 33 307 2.94e-33 128
MS.gene89391.t1 MTR_5g018480 28.269 283 190 5 34 303 38 320 1.15e-32 123
MS.gene89391.t1 MTR_4g088425 31.250 272 173 7 37 301 40 304 1.17e-32 126
MS.gene89391.t1 MTR_5g073020 29.455 275 182 7 36 301 33 304 1.67e-32 126
MS.gene89391.t1 MTR_0059s0170 28.808 302 189 9 16 298 7 301 1.88e-32 125
MS.gene89391.t1 MTR_3g057860 25.442 283 196 6 5 277 2 279 3.43e-32 125
MS.gene89391.t1 MTR_4g088415 30.182 275 178 7 37 298 44 317 7.54e-32 122
MS.gene89391.t1 MTR_4g062500 28.968 252 167 3 37 277 36 286 9.98e-32 124
MS.gene89391.t1 MTR_7g075390 29.592 294 193 7 1 286 1 288 1.01e-31 124
MS.gene89391.t1 MTR_8g046240 28.617 311 203 5 13 310 13 317 1.01e-31 124
MS.gene89391.t1 MTR_5g016440 29.075 227 159 2 34 258 29 255 1.05e-31 124
MS.gene89391.t1 MTR_6g035115 32.751 229 144 6 33 258 34 255 1.94e-31 123
MS.gene89391.t1 MTR_8g468780 29.661 236 157 5 71 298 1 235 4.25e-31 121
MS.gene89391.t1 MTR_8g012585 31.076 251 161 7 63 301 1 251 5.06e-31 121
MS.gene89391.t1 MTR_0171s0010 26.846 298 202 6 16 298 12 308 5.59e-31 122
MS.gene89391.t1 MTR_4g094775 28.571 294 197 5 17 301 11 300 5.61e-31 122
MS.gene89391.t1 MTR_6g008530 29.003 331 201 10 5 309 15 337 6.27e-31 122
MS.gene89391.t1 MTR_0608s0010 33.846 195 126 2 22 214 18 211 7.08e-31 119
MS.gene89391.t1 MTR_8g046210 29.021 286 194 5 30 310 36 317 1.05e-30 121
MS.gene89391.t1 MTR_6g034965 27.338 278 175 10 13 277 10 273 1.12e-30 120
MS.gene89391.t1 MTR_5g094520 30.736 231 149 6 71 297 1 224 2.22e-30 119
MS.gene89391.t1 MTR_7g027960 28.387 310 196 8 16 309 8 307 3.34e-30 119
MS.gene89391.t1 MTR_7g028020 28.387 310 196 8 16 309 8 307 5.20e-30 119
MS.gene89391.t1 MTR_7g075610 29.304 273 180 4 15 280 8 274 5.77e-30 119
MS.gene89391.t1 MTR_6g042610 29.808 312 195 9 14 301 7 318 3.56e-29 117
MS.gene89391.t1 MTR_6g042540 29.904 311 195 9 14 301 7 317 4.34e-29 116
MS.gene89391.t1 MTR_4g471620 35.000 180 109 4 6 180 3 179 5.09e-29 110
MS.gene89391.t1 MTR_4g095050 29.110 292 189 6 34 310 29 317 6.58e-29 116
MS.gene89391.t1 MTR_6g008600 28.990 307 190 9 28 309 32 335 6.73e-29 116
MS.gene89391.t1 MTR_4g104540 31.301 246 161 6 71 311 1 243 9.66e-29 114
MS.gene89391.t1 MTR_2g437840 28.906 256 168 4 15 259 10 262 1.06e-28 115
MS.gene89391.t1 MTR_6g008640 29.897 291 179 8 33 301 36 323 1.35e-28 115
MS.gene89391.t1 MTR_1g055325 29.373 303 203 6 15 310 31 329 4.19e-28 114
MS.gene89391.t1 MTR_4g062530 28.244 262 170 5 45 298 44 295 4.31e-28 113
MS.gene89391.t1 MTR_1g107305 26.568 271 176 5 47 299 49 314 8.30e-28 111
MS.gene89391.t1 MTR_6g008430 28.929 280 179 10 15 278 19 294 1.20e-27 112
MS.gene89391.t1 MTR_6g008620 27.044 318 202 9 5 300 15 324 1.30e-27 112
MS.gene89391.t1 MTR_4g062510 26.690 281 190 5 47 313 48 326 1.54e-27 112
MS.gene89391.t1 MTR_4g018800 28.931 318 203 10 7 301 8 325 2.09e-27 112
MS.gene89391.t1 MTR_5g095220 27.907 258 152 8 32 283 24 253 3.37e-27 110
MS.gene89391.t1 MTR_1g107295 25.979 281 192 5 47 313 49 327 1.45e-26 109
MS.gene89391.t1 MTR_5g007460 30.000 290 192 8 29 310 1 287 2.04e-26 108
MS.gene89391.t1 MTR_4g035330 33.750 240 152 4 27 264 21 255 2.31e-26 108
MS.gene89391.t1 MTR_1g091003 25.926 297 209 5 20 310 16 307 3.28e-26 108
MS.gene89391.t1 MTR_1g037370 30.709 254 171 4 36 286 31 282 4.76e-26 107
MS.gene89391.t1 MTR_4g102280 30.272 294 187 7 14 298 26 310 5.13e-26 108
MS.gene89391.t1 MTR_3g014880 27.463 335 214 10 1 309 3 334 5.94e-26 107
MS.gene89391.t1 MTR_5g073240 36.765 136 75 2 19 143 56 191 9.02e-26 101
MS.gene89391.t1 MTR_5g007550 28.840 319 193 11 7 310 9 308 9.82e-26 107
MS.gene89391.t1 MTR_1g091023 27.653 311 210 7 10 310 2 307 1.22e-25 106
MS.gene89391.t1 MTR_5g007450 28.617 311 188 11 15 310 17 308 2.26e-25 105
MS.gene89391.t1 MTR_4g077210 31.707 287 185 7 34 310 33 318 3.14e-25 105
MS.gene89391.t1 MTR_1g091010 27.719 285 197 5 30 310 27 306 3.58e-25 105
MS.gene89391.t1 MTR_1g116890 27.509 269 180 8 35 292 33 297 5.36e-25 105
MS.gene89391.t1 MTR_3g058230 28.270 237 151 7 71 298 1 227 1.33e-24 103
MS.gene89391.t1 MTR_3g076550 27.362 307 179 9 13 311 46 316 1.37e-24 103
MS.gene89391.t1 MTR_5g094535 35.811 148 90 3 8 150 7 154 1.40e-24 99.8
MS.gene89391.t1 MTR_2g437880 32.520 246 150 4 34 269 30 269 1.70e-24 103
MS.gene89391.t1 MTR_6g022450 27.134 328 216 12 4 311 2 326 2.30e-24 103
MS.gene89391.t1 MTR_4g078110 30.698 215 130 5 28 240 20 217 2.77e-24 102
MS.gene89391.t1 MTR_6g008650 27.879 330 209 9 6 309 7 333 4.29e-24 102
MS.gene89391.t1 MTR_2g073420 28.322 286 196 5 30 310 38 319 1.34e-23 100
MS.gene89391.t1 MTR_3g058380 28.761 226 146 6 81 298 2 220 1.79e-23 100
MS.gene89391.t1 MTR_7g075540 31.724 290 176 6 15 289 8 290 4.81e-23 99.4
MS.gene89391.t1 MTR_7g075580 28.253 269 186 4 47 309 45 312 2.24e-22 97.4
MS.gene89391.t1 MTR_0171s0030 27.523 218 149 4 89 298 2 218 2.41e-22 96.7
MS.gene89391.t1 MTR_5g094670 32.911 158 76 5 17 163 10 148 2.46e-21 91.7
MS.gene89391.t1 MTR_2g073440 26.490 302 196 6 15 310 10 291 4.33e-21 93.6
MS.gene89391.t1 MTR_7g075600 29.123 285 189 6 15 289 8 289 1.39e-20 92.4
MS.gene89391.t1 MTR_7g092600 23.643 258 195 2 43 298 46 303 8.47e-20 90.1
MS.gene89391.t1 MTR_8g012590 26.027 292 185 11 37 311 38 315 1.18e-19 89.4
MS.gene89391.t1 MTR_5g056720 27.477 222 136 3 59 277 20 219 1.23e-19 89.0
MS.gene89391.t1 MTR_1g097220 28.214 280 187 9 30 301 54 327 1.50e-19 89.4
MS.gene89391.t1 MTR_3g077460 25.573 262 160 5 38 298 9 236 3.43e-19 87.4
MS.gene89391.t1 MTR_3g467220 23.642 313 221 6 7 301 10 322 4.52e-19 87.8
MS.gene89391.t1 MTR_5g045250 27.178 287 193 10 31 311 55 331 7.25e-19 87.4
MS.gene89391.t1 MTR_8g080520 26.689 296 200 11 11 297 39 326 9.97e-19 87.0
MS.gene89391.t1 MTR_5g070685 42.424 99 57 0 16 114 18 116 1.86e-18 80.1
MS.gene89391.t1 MTR_3g465300 22.006 309 226 5 5 301 19 324 2.40e-18 85.9
MS.gene89391.t1 MTR_8g091680 25.000 256 150 4 47 301 39 253 7.31e-18 84.0
MS.gene89391.t1 MTR_3g025250 41.441 111 58 4 191 296 1 109 7.88e-18 82.4
MS.gene89391.t1 MTR_5g094460 35.455 110 68 2 31 137 24 133 2.00e-17 82.4
MS.gene89391.t1 MTR_8g036185 23.828 256 181 5 59 301 57 311 4.90e-17 81.6
MS.gene89391.t1 MTR_5g075450 27.619 210 139 4 29 229 26 231 1.20e-16 80.5
MS.gene89391.t1 MTR_1g111240 26.633 199 133 3 57 247 87 280 5.62e-16 78.6
MS.gene89391.t1 MTR_0155s0010 33.333 129 86 0 25 153 6 134 1.63e-15 72.8
MS.gene89391.t1 MTR_8g073950 23.469 294 200 8 30 301 30 320 3.13e-14 73.6
MS.gene89391.t1 MTR_5g070830 21.233 292 188 7 43 300 131 414 8.24e-14 72.4
MS.gene89391.t1 MTR_8g073960 22.039 304 216 7 15 300 23 323 1.24e-13 71.6
MS.gene89391.t1 MTR_4g133760 25.217 230 133 7 71 297 1 194 1.88e-13 70.9
MS.gene89391.t1 MTR_3g467200 20.848 283 206 6 45 310 59 340 6.52e-13 69.3
MS.gene89391.t1 MTR_6g084910 26.016 123 85 2 114 235 3 120 5.09e-11 59.7
MS.gene89391.t1 MTR_4g088170 22.468 316 212 10 7 302 1 303 5.43e-11 63.5
MS.gene89391.t1 MTR_3g057880 32.927 82 54 1 13 93 37 118 7.08e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89391.t1 AT5G07990 41.254 303 170 5 5 302 2 301 2.44e-75 240
MS.gene89391.t1 AT1G01280 29.889 271 182 3 45 307 41 311 2.21e-41 150
MS.gene89391.t1 AT5G06900 29.766 299 201 5 3 298 7 299 2.37e-41 150
MS.gene89391.t1 AT1G13110 28.758 306 205 5 17 310 13 317 3.06e-41 150
MS.gene89391.t1 AT5G42590 27.815 302 212 5 11 309 7 305 2.39e-39 144
MS.gene89391.t1 AT2G30770 30.389 283 189 5 32 311 29 306 1.93e-38 142
MS.gene89391.t1 AT4G36220 34.247 219 136 5 43 260 47 258 2.13e-38 142
MS.gene89391.t1 AT3G48320 30.303 297 195 7 16 310 12 298 3.75e-38 141
MS.gene89391.t1 AT3G26300 30.435 299 191 6 17 301 4 299 9.26e-38 140
MS.gene89391.t1 AT4G12320 31.104 299 194 6 11 301 20 314 9.33e-38 140
MS.gene89391.t1 AT4G12300 31.752 274 180 5 30 297 36 308 4.51e-37 139
MS.gene89391.t1 AT3G48280 29.268 287 187 8 17 298 11 286 7.87e-37 137
MS.gene89391.t1 AT3G48310 30.855 269 169 7 35 298 31 287 9.26e-37 137
MS.gene89391.t1 AT3G26310 30.741 270 178 5 38 301 32 298 1.23e-36 137
MS.gene89391.t1 AT5G57260 29.412 272 182 6 37 301 31 299 1.64e-36 137
MS.gene89391.t1 AT5G25140 30.797 276 182 5 13 285 7 276 5.59e-36 135
MS.gene89391.t1 AT5G04330 29.710 276 180 6 34 298 30 302 1.19e-35 135
MS.gene89391.t1 AT3G48300 29.963 267 173 7 35 298 29 284 1.52e-35 134
MS.gene89391.t1 AT3G48300 29.963 267 173 7 35 298 31 286 1.55e-35 134
MS.gene89391.t1 AT3G26280 28.873 284 178 6 29 297 25 299 5.60e-35 133
MS.gene89391.t1 AT3G26280 28.873 284 178 6 29 297 42 316 6.90e-35 133
MS.gene89391.t1 AT5G25130 31.076 251 167 4 13 260 7 254 1.77e-34 131
MS.gene89391.t1 AT3G26330 30.147 272 179 6 37 301 32 299 4.76e-34 130
MS.gene89391.t1 AT5G25120 29.392 296 197 7 13 302 7 296 5.19e-34 130
MS.gene89391.t1 AT3G48270 29.412 272 179 6 30 298 25 286 8.28e-34 129
MS.gene89391.t1 AT3G26170 27.586 290 199 6 17 297 11 298 1.56e-33 129
MS.gene89391.t1 AT4G20240 30.279 251 163 5 32 277 29 272 2.74e-33 126
MS.gene89391.t1 AT3G26320 30.035 283 179 8 30 301 25 299 2.81e-33 128
MS.gene89391.t1 AT3G26160 27.986 293 196 7 16 297 10 298 4.24e-33 127
MS.gene89391.t1 AT4G37310 30.233 301 189 9 13 301 12 303 4.75e-33 127
MS.gene89391.t1 AT2G45550 28.013 307 208 6 15 309 12 317 5.27e-33 127
MS.gene89391.t1 AT4G20240 30.279 251 163 5 32 277 29 272 8.65e-33 126
MS.gene89391.t1 AT3G48290 28.205 273 183 7 30 299 27 289 1.50e-32 126
MS.gene89391.t1 AT4G13770 26.071 280 202 5 23 298 17 295 1.72e-32 126
MS.gene89391.t1 AT3G26180 28.622 283 186 7 1 277 3 275 1.90e-32 125
MS.gene89391.t1 AT4G31500 27.437 277 193 6 29 298 19 294 1.98e-32 125
MS.gene89391.t1 AT5G67310 30.859 256 165 8 13 259 16 268 2.14e-32 125
MS.gene89391.t1 AT3G48290 27.941 272 183 7 30 298 27 288 4.77e-32 124
MS.gene89391.t1 AT3G26290 27.778 270 186 5 38 301 33 299 8.42e-32 124
MS.gene89391.t1 AT3G26290 27.778 270 186 5 38 301 46 312 1.00e-31 124
MS.gene89391.t1 AT4G13310 26.871 294 202 8 28 312 21 310 1.71e-31 121
MS.gene89391.t1 AT5G24960 28.014 282 195 6 35 312 32 309 1.85e-31 122
MS.gene89391.t1 AT1G13080 29.893 281 176 9 32 298 26 299 1.88e-31 123
MS.gene89391.t1 AT2G30750 27.857 280 194 5 35 311 32 306 3.47e-31 122
MS.gene89391.t1 AT4G13310 26.871 294 202 8 28 312 21 310 3.72e-31 122
MS.gene89391.t1 AT5G25180 31.600 250 160 5 18 261 11 255 4.63e-31 122
MS.gene89391.t1 AT5G24960 28.014 282 195 6 35 312 32 309 5.01e-31 122
MS.gene89391.t1 AT5G24950 27.305 282 197 6 35 312 31 308 6.00e-31 121
MS.gene89391.t1 AT1G11610 27.083 288 190 6 35 311 32 310 6.19e-31 122
MS.gene89391.t1 AT1G11610 28.090 267 184 5 35 298 32 293 7.17e-31 121
MS.gene89391.t1 AT4G31970 28.671 286 182 9 38 301 33 318 7.99e-31 121
MS.gene89391.t1 AT4G12330 29.771 262 176 5 43 298 53 312 9.18e-31 121
MS.gene89391.t1 AT2G45560 28.479 309 204 8 15 309 12 317 7.04e-30 119
MS.gene89391.t1 AT2G45560 28.231 294 194 8 15 294 12 302 9.11e-30 115
MS.gene89391.t1 AT3G26270 28.929 280 181 6 29 296 25 298 1.63e-29 117
MS.gene89391.t1 AT2G02580 27.667 300 198 7 17 301 4 299 2.68e-29 117
MS.gene89391.t1 AT3G26220 26.645 304 198 8 13 297 1 298 3.59e-29 117
MS.gene89391.t1 AT4G13290 26.962 293 195 9 28 312 22 303 5.08e-29 116
MS.gene89391.t1 AT3G26190 29.661 236 152 5 35 261 27 257 6.33e-29 116
MS.gene89391.t1 AT3G52970 29.562 274 179 9 12 277 16 283 1.67e-28 115
MS.gene89391.t1 AT1G13090 26.667 255 176 4 29 277 21 270 2.32e-28 111
MS.gene89391.t1 AT4G22710 27.907 258 182 4 45 298 62 319 2.41e-28 114
MS.gene89391.t1 AT4G31940 28.000 300 189 8 38 310 33 332 4.48e-28 114
MS.gene89391.t1 AT2G45560 28.261 230 155 5 15 235 12 240 8.92e-28 108
MS.gene89391.t1 AT3G52970 27.778 288 180 9 12 277 16 297 1.40e-27 112
MS.gene89391.t1 AT4G22690 28.352 261 177 5 45 298 93 350 1.55e-27 112
MS.gene89391.t1 AT1G13090 26.667 255 176 4 29 277 21 270 3.20e-27 111
MS.gene89391.t1 AT5G10600 27.160 243 168 4 23 258 33 273 3.22e-27 111
MS.gene89391.t1 AT2G24180 27.957 279 187 6 32 301 32 305 3.78e-27 111
MS.gene89391.t1 AT1G33720 25.839 298 204 7 15 298 12 306 4.34e-27 111
MS.gene89391.t1 AT5G06905 25.939 293 207 7 15 300 9 298 5.54e-27 110
MS.gene89391.t1 AT3G26200 27.668 253 173 5 29 276 21 268 7.72e-27 110
MS.gene89391.t1 AT5G44620 27.969 261 183 4 43 298 53 313 1.04e-26 110
MS.gene89391.t1 AT5G10610 25.806 248 177 3 14 258 14 257 1.28e-26 109
MS.gene89391.t1 AT3G26230 27.839 273 188 5 13 277 1 272 2.90e-26 108
MS.gene89391.t1 AT3G26210 28.270 237 164 4 45 277 40 274 6.75e-26 107
MS.gene89391.t1 AT4G31950 31.034 261 148 10 38 278 33 281 1.08e-25 107
MS.gene89391.t1 AT3G25180 29.911 224 148 7 60 277 65 285 1.25e-25 105
MS.gene89391.t1 AT3G53280 29.960 247 137 7 36 263 28 257 1.35e-25 106
MS.gene89391.t1 AT2G42250 26.296 270 195 4 32 298 37 305 1.36e-25 107
MS.gene89391.t1 AT3G25180 29.911 224 148 7 60 277 65 285 4.40e-25 105
MS.gene89391.t1 AT3G61040 28.625 269 181 7 37 300 34 296 8.27e-25 103
MS.gene89391.t1 AT4G12310 28.788 264 179 5 43 298 51 313 8.58e-25 104
MS.gene89391.t1 AT2G45580 29.008 262 176 6 46 298 48 308 1.09e-24 103
MS.gene89391.t1 AT3G44250 29.020 255 154 10 35 276 27 267 1.65e-24 103
MS.gene89391.t1 AT2G45570 28.090 267 183 6 43 301 45 310 2.11e-24 103
MS.gene89391.t1 AT2G45580 29.008 262 176 6 46 298 48 308 2.35e-24 103
MS.gene89391.t1 AT4G37330 28.169 284 183 9 10 281 2 276 2.38e-24 103
MS.gene89391.t1 AT3G61040 28.090 267 185 6 37 300 34 296 4.60e-24 102
MS.gene89391.t1 AT3G26150 24.232 293 207 7 16 297 10 298 6.95e-24 102
MS.gene89391.t1 AT2G23190 29.434 265 168 10 16 269 56 312 7.27e-24 102
MS.gene89391.t1 AT4G37320 28.571 266 170 9 16 269 11 268 1.42e-23 100
MS.gene89391.t1 AT3G20940 26.103 272 196 5 34 301 40 310 5.49e-23 99.4
MS.gene89391.t1 AT3G53300 26.316 247 178 4 34 278 26 270 9.47e-23 98.6
MS.gene89391.t1 AT3G26830 25.556 270 194 5 28 292 20 287 1.05e-22 98.6
MS.gene89391.t1 AT5G57220 27.953 254 173 7 11 258 6 255 2.81e-22 97.1
MS.gene89391.t1 AT4G37430 26.667 270 181 7 11 269 5 268 9.98e-22 95.5
MS.gene89391.t1 AT4G20235 24.314 255 158 6 16 261 8 236 1.45e-21 93.6
MS.gene89391.t1 AT1G74540 32.710 214 130 6 27 232 18 225 2.46e-21 94.4
MS.gene89391.t1 AT5G36220 26.510 298 198 9 16 301 16 304 9.10e-21 92.8
MS.gene89391.t1 AT2G23220 30.901 233 149 7 35 258 45 274 1.38e-20 92.4
MS.gene89391.t1 AT4G37370 25.325 308 210 11 15 310 11 310 1.72e-20 92.0
MS.gene89391.t1 AT3G20130 25.098 255 180 6 52 300 59 308 2.17e-20 91.7
MS.gene89391.t1 AT4G37410 26.592 267 175 8 13 269 10 265 2.64e-20 91.7
MS.gene89391.t1 AT2G25160 27.389 314 197 12 15 301 4 313 5.31e-20 90.1
MS.gene89391.t1 AT2G25160 27.389 314 197 12 15 301 4 313 6.17e-20 90.5
MS.gene89391.t1 AT1G13100 25.180 278 180 8 51 308 40 309 1.06e-19 89.7
MS.gene89391.t1 AT1G74110 26.837 313 199 10 13 301 31 337 1.13e-19 89.7
MS.gene89391.t1 AT2G40890 24.286 280 198 6 11 281 6 280 1.36e-19 89.4
MS.gene89391.t1 AT5G09970 26.241 282 195 9 38 312 71 346 2.77e-19 88.6
MS.gene89391.t1 AT2G46660 24.832 298 190 11 1 278 25 308 5.27e-19 87.8
MS.gene89391.t1 AT4G37400 29.358 218 143 6 57 269 52 263 5.34e-19 87.8
MS.gene89391.t1 AT4G37360 25.357 280 179 10 16 272 12 284 1.06e-18 86.7
MS.gene89391.t1 AT4G37340 25.564 266 176 9 15 267 11 267 3.71e-18 85.1
MS.gene89391.t1 AT5G05260 25.817 306 198 10 30 310 36 337 7.76e-18 84.3
MS.gene89391.t1 AT5G35917 25.649 308 198 9 30 310 38 341 2.46e-17 82.8
MS.gene89391.t1 AT3G20950 24.422 303 210 7 15 301 14 313 3.06e-17 82.4
MS.gene89391.t1 AT3G28740 25.862 232 162 6 35 258 38 267 3.20e-17 82.4
MS.gene89391.t1 AT3G20110 24.667 300 207 9 15 301 13 306 3.21e-17 82.4
MS.gene89391.t1 AT3G61880 24.549 277 196 8 30 301 60 328 1.86e-16 80.1
MS.gene89391.t1 AT1G74550 28.962 183 125 3 29 209 20 199 1.88e-16 80.1
MS.gene89391.t1 AT3G32047 24.609 256 181 6 52 301 59 308 2.21e-16 79.7
MS.gene89391.t1 AT3G61880 24.549 277 196 8 30 301 60 328 2.55e-16 79.7
MS.gene89391.t1 AT4G39950 24.286 280 197 8 36 301 56 334 5.50e-16 79.0
MS.gene89391.t1 AT4G39950 24.286 280 197 8 36 301 96 374 6.49e-16 78.6
MS.gene89391.t1 AT3G20090 22.530 253 192 4 52 301 60 311 6.83e-16 78.6
MS.gene89391.t1 AT1G01190 25.086 291 200 9 12 297 49 326 7.20e-16 78.6
MS.gene89391.t1 AT1G01190 25.086 291 200 9 12 297 54 331 7.88e-16 78.2
MS.gene89391.t1 AT5G47990 23.293 249 187 3 57 302 64 311 1.03e-15 77.8
MS.gene89391.t1 AT4G15360 23.881 268 198 6 36 298 40 306 1.95e-15 77.0
MS.gene89391.t1 AT1G50520 23.282 262 193 7 45 300 52 311 2.08e-15 77.0
MS.gene89391.t1 AT4G15350 24.409 254 184 6 52 300 52 302 4.49e-15 75.9
MS.gene89391.t1 AT3G26180 29.762 168 97 4 1 168 3 149 5.71e-15 75.1
MS.gene89391.t1 AT5G04630 26.160 237 152 8 10 229 3 233 1.55e-14 74.3
MS.gene89391.t1 AT1G16400 24.149 323 217 10 16 310 17 339 2.04e-14 73.9
MS.gene89391.t1 AT1G16410 22.368 304 211 9 30 310 39 340 2.13e-14 73.6
MS.gene89391.t1 AT5G05260 26.141 241 155 8 30 249 36 274 2.79e-14 73.6
MS.gene89391.t1 AT1G16410 22.368 304 211 9 30 310 39 340 3.48e-14 73.2
MS.gene89391.t1 AT2G22330 22.337 291 208 7 29 301 46 336 5.80e-14 72.8
MS.gene89391.t1 AT2G22330 22.535 284 202 7 29 294 69 352 5.90e-14 72.8
MS.gene89391.t1 AT2G27000 26.490 151 107 2 57 205 61 209 7.72e-14 72.4
MS.gene89391.t1 AT1G58260 20.863 278 202 9 35 295 36 312 2.48e-13 70.9
MS.gene89391.t1 AT3G20140 27.072 181 126 4 36 213 42 219 3.43e-13 70.5
MS.gene89391.t1 AT4G15330 22.472 267 201 5 35 297 37 301 7.24e-13 69.3
MS.gene89391.t1 AT1G79370 23.569 297 189 10 34 296 38 330 8.63e-13 69.3
MS.gene89391.t1 AT3G20100 21.401 257 184 5 52 298 58 306 1.71e-12 68.2
MS.gene89391.t1 AT3G20120 25.368 272 183 10 52 313 58 319 1.89e-12 68.2
MS.gene89391.t1 AT3G10560 27.972 143 99 2 35 173 45 187 5.62e-12 66.6
MS.gene89391.t1 AT3G20130 24.883 213 149 6 94 300 73 280 6.10e-12 66.6
MS.gene89391.t1 AT3G53290 22.951 183 137 3 88 266 10 192 9.06e-12 65.9
MS.gene89391.t1 AT5G42580 23.361 244 174 5 56 298 60 291 1.38e-11 65.5
MS.gene89391.t1 AT1G50560 23.506 251 178 7 57 298 65 310 5.56e-11 63.5
MS.gene89391.t1 AT3G20960 20.482 249 180 5 63 301 69 309 8.09e-11 63.2

Find 74 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAATCATGTATCTTAAAA+TGG 0.151643 3.3:+32962140 MS.gene89391:CDS
CTAAATAGGCCTACCATTAT+TGG 0.154153 3.3:+32962237 MS.gene89391:CDS
GTGGGAAGGCCCTTCAAAAT+TGG 0.196209 3.3:+32962358 MS.gene89391:CDS
GCAAGAGTCAAAGGAGTTTA+AGG 0.199332 3.3:+32962539 MS.gene89391:CDS
ATTATTGGTGCAACTTATTT+AGG 0.203717 3.3:+32962252 MS.gene89391:CDS
TAGACCATAATTTCCTAAAT+AGG 0.225485 3.3:+32962223 MS.gene89391:CDS
GCAAATGATGATGATAATTT+TGG 0.226316 3.3:+32962768 MS.gene89391:CDS
CAGCATCAAGGCTTTATTAT+TGG 0.227385 3.3:+32962809 MS.gene89391:CDS
ACAAACATGGCCAAGAAATT+TGG 0.230429 3.3:+32962117 MS.gene89391:CDS
CACATGATCTTCAATCAATT+TGG 0.246062 3.3:-32962694 None:intergenic
CATGATTGGTCCAAATTTCT+TGG 0.254577 3.3:-32962127 None:intergenic
CAATAATGGTAGGCCTATTT+AGG 0.256321 3.3:-32962236 None:intergenic
TTGCAAAATATGGTCCTAAA+TGG 0.259254 3.3:+32962298 MS.gene89391:CDS
GTGAGATCCATTCATGAGTT+TGG 0.267505 3.3:+32962414 MS.gene89391:CDS
TTCCTAAGTAGTTTCCATTT+AGG 0.268436 3.3:-32962312 None:intergenic
GCGTTTCTTCTTAGAGATAT+TGG 0.301771 3.3:+32961949 MS.gene89391:CDS
TTTCATTGGTTGGATTGATT+TGG 0.313712 3.3:+32962617 MS.gene89391:CDS
GTCAAAGGAGTTTAAGGAAA+TGG 0.314737 3.3:+32962545 MS.gene89391:CDS
TGAGGCATGGTTCCCAAGTT+TGG 0.344857 3.3:-32962084 None:intergenic
TAGGCCTATTTAGGAAATTA+TGG 0.345122 3.3:-32962227 None:intergenic
TAAATAAGTTGCACCAATAA+TGG 0.350266 3.3:-32962250 None:intergenic
TCTTGGTGTTCTACCAAACT+TGG 0.376016 3.3:+32962071 MS.gene89391:CDS
GTGGAGTTCATGACAATATC+TGG 0.378532 3.3:+32962570 MS.gene89391:CDS
TGAGATCCATTCATGAGTTT+GGG 0.383291 3.3:+32962415 MS.gene89391:CDS
TTCATCTCACACTTCTTCAT+AGG 0.386198 3.3:+32961991 MS.gene89391:CDS
CCAAGAGGATGGCCAATTCT+TGG 0.393947 3.3:+32962054 MS.gene89391:CDS
CCAAGAATTGGCCATCCTCT+TGG 0.401381 3.3:-32962054 None:intergenic
TGAGATGAAGAAGATGAAAA+TGG 0.404527 3.3:-32961977 None:intergenic
AGATGAAACGATTGCATAAG+AGG 0.415056 3.3:+32962655 MS.gene89391:CDS
TGGGAAGGCCCTTCAAAATT+GGG 0.421338 3.3:+32962359 MS.gene89391:CDS
TTTGGTAGAACACCAAGAAT+TGG 0.423588 3.3:-32962066 None:intergenic
AAACGTATGTTTGCAAGTAA+AGG 0.436674 3.3:+32962516 MS.gene89391:CDS
AAATAAGATAAAGTGGTAGC+TGG 0.438293 3.3:-32962846 None:intergenic
AACGTATGTTTGCAAGTAAA+GGG 0.441525 3.3:+32962517 MS.gene89391:CDS
CAAGAATTGGCCATCCTCTT+GGG 0.458446 3.3:-32962053 None:intergenic
CCAATCATGTATCTTAAAAT+GGG 0.458574 3.3:+32962141 MS.gene89391:CDS
TATTGACAAATAAGATAAAG+TGG 0.463500 3.3:-32962853 None:intergenic
GGTGAATCGATTGAGGTTGG+TGG 0.483376 3.3:+32962444 MS.gene89391:CDS
GGCCATCCTCTTGGGCCAGG+TGG 0.483661 3.3:-32962045 None:intergenic
CTTCCCACCAAGCATGTGTA+AGG 0.484078 3.3:-32962343 None:intergenic
TTAACAACCTTACACATGCT+TGG 0.487142 3.3:+32962336 MS.gene89391:CDS
GCCATCCTCTTGGGCCAGGT+GGG 0.492542 3.3:-32962044 None:intergenic
CAATAATAAAGCCTTGATGC+TGG 0.493892 3.3:-32962808 None:intergenic
TACGTTTGCTTAATACAACT+TGG 0.497655 3.3:-32962500 None:intergenic
ATTGTGCTCATGAACGTAAA+GGG 0.500436 3.3:+32962718 MS.gene89391:CDS
TCCCACCTGGCCCAAGAGGA+TGG 0.504061 3.3:+32962043 MS.gene89391:CDS
CAACCTTACACATGCTTGGT+GGG 0.507088 3.3:+32962340 MS.gene89391:CDS
AAGTAAAGGGCAAGAGTCAA+AGG 0.511970 3.3:+32962530 MS.gene89391:CDS
GTCCTAAATGGAAACTACTT+AGG 0.518627 3.3:+32962310 MS.gene89391:CDS
ATTGAGCTTGTCCAGCATCA+AGG 0.520274 3.3:+32962797 MS.gene89391:CDS
ACAACCTTACACATGCTTGG+TGG 0.523434 3.3:+32962339 MS.gene89391:CDS
ATTGGCCATCCTCTTGGGCC+AGG 0.524628 3.3:-32962048 None:intergenic
CTTGGTGTTCTACCAAACTT+GGG 0.526928 3.3:+32962072 MS.gene89391:CDS
GGAGTTTAAGGAAATGGTTG+TGG 0.529479 3.3:+32962551 MS.gene89391:CDS
GATTGATTTGGAAGGTGTAG+TGG 0.546204 3.3:+32962629 MS.gene89391:CDS
AAAGGTGAATCGATTGAGGT+TGG 0.554166 3.3:+32962441 MS.gene89391:CDS
CTTACACATGCTTGGTGGGA+AGG 0.555410 3.3:+32962344 MS.gene89391:CDS
AATAAGATAAAGTGGTAGCT+GGG 0.556555 3.3:-32962845 None:intergenic
ATTGGTTGGATTGATTTGGA+AGG 0.559192 3.3:+32962621 MS.gene89391:CDS
AAATCAATCCAACCAATGAA+AGG 0.571610 3.3:-32962615 None:intergenic
AATCTCCCACCTGGCCCAAG+AGG 0.584935 3.3:+32962039 MS.gene89391:CDS
TCATGTCACACTCACAAACA+TGG 0.588818 3.3:+32962104 MS.gene89391:CDS
ACAATATCTGGAATCAACAT+TGG 0.589596 3.3:+32962582 MS.gene89391:CDS
GGCAAATGTGAGAGAAATTG+AGG 0.592663 3.3:+32962380 MS.gene89391:CDS
ATTGATTTGGAAGGTGTAGT+GGG 0.597317 3.3:+32962630 MS.gene89391:CDS
AATTGTGCTCATGAACGTAA+AGG 0.598806 3.3:+32962717 MS.gene89391:CDS
TAAGTTGCACCAATAATGGT+AGG 0.599190 3.3:-32962246 None:intergenic
AGAAACGCTCTAGCTGCATG+TGG 0.608178 3.3:-32962192 None:intergenic
TGTGAGTGTGACATGAGGCA+TGG 0.616251 3.3:-32962097 None:intergenic
GAAACGCTCTAGCTGCATGT+GGG 0.661705 3.3:-32962191 None:intergenic
ATGTTTGTGAGTGTGACATG+AGG 0.690948 3.3:-32962102 None:intergenic
GAGTTGTGCAATAACAAACA+TGG 0.731034 3.3:+32962473 MS.gene89391:CDS
AGAAATTGAGGTGAAACACA+TGG 0.742638 3.3:+32962392 MS.gene89391:CDS
AATGGGCACTTGTGACACTG+TGG 0.748850 3.3:+32962158 MS.gene89391:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAATATCCAAAAAATC+TGG - chr3.3:32962747-32962766 None:intergenic 20.0%
!! TATTGACAAATAAGATAAAG+TGG - chr3.3:32962856-32962875 None:intergenic 20.0%
!!! AGATTTTTTGGATATTGTTT+TGG + chr3.3:32962746-32962765 MS.gene89391:CDS 20.0%
! ACCAATCATGTATCTTAAAA+TGG + chr3.3:32962140-32962159 MS.gene89391:CDS 25.0%
! ATTATTGGTGCAACTTATTT+AGG + chr3.3:32962252-32962271 MS.gene89391:CDS 25.0%
! CCAATCATGTATCTTAAAAT+GGG + chr3.3:32962141-32962160 MS.gene89391:CDS 25.0%
! TAAATAAGTTGCACCAATAA+TGG - chr3.3:32962253-32962272 None:intergenic 25.0%
! TAGACCATAATTTCCTAAAT+AGG + chr3.3:32962223-32962242 MS.gene89391:CDS 25.0%
!!! GCAAATGATGATGATAATTT+TGG + chr3.3:32962768-32962787 MS.gene89391:CDS 25.0%
AAACGTATGTTTGCAAGTAA+AGG + chr3.3:32962516-32962535 MS.gene89391:CDS 30.0%
AAATAAGATAAAGTGGTAGC+TGG - chr3.3:32962849-32962868 None:intergenic 30.0%
AAATCAATCCAACCAATGAA+AGG - chr3.3:32962618-32962637 None:intergenic 30.0%
AACGTATGTTTGCAAGTAAA+GGG + chr3.3:32962517-32962536 MS.gene89391:CDS 30.0%
AATAAGATAAAGTGGTAGCT+GGG - chr3.3:32962848-32962867 None:intergenic 30.0%
ATTCATGAGTTTGGGAAAAA+AGG + chr3.3:32962423-32962442 MS.gene89391:CDS 30.0%
CACATGATCTTCAATCAATT+TGG - chr3.3:32962697-32962716 None:intergenic 30.0%
TACGTTTGCTTAATACAACT+TGG - chr3.3:32962503-32962522 None:intergenic 30.0%
TAGGCCTATTTAGGAAATTA+TGG - chr3.3:32962230-32962249 None:intergenic 30.0%
TGAGATGAAGAAGATGAAAA+TGG - chr3.3:32961980-32961999 None:intergenic 30.0%
TTCCTAAGTAGTTTCCATTT+AGG - chr3.3:32962315-32962334 None:intergenic 30.0%
TTGCAAAATATGGTCCTAAA+TGG + chr3.3:32962298-32962317 MS.gene89391:CDS 30.0%
! ACAATATCTGGAATCAACAT+TGG + chr3.3:32962582-32962601 MS.gene89391:CDS 30.0%
! ATTTTGTACCTTTCATTGGT+TGG + chr3.3:32962607-32962626 MS.gene89391:CDS 30.0%
! GACCATATTTTGCAAAAACA+AGG - chr3.3:32962293-32962312 None:intergenic 30.0%
! TTTCATTGGTTGGATTGATT+TGG + chr3.3:32962617-32962636 MS.gene89391:CDS 30.0%
!!! CCCATTTTAAGATACATGAT+TGG - chr3.3:32962144-32962163 None:intergenic 30.0%
!!! GACCTTGTTTTTGCAAAATA+TGG + chr3.3:32962288-32962307 MS.gene89391:CDS 30.0%
!!! TAAAGGGAATCCAGATTTTT+TGG + chr3.3:32962734-32962753 MS.gene89391:CDS 30.0%
!!! TTTTTTCCCAAACTCATGAA+TGG - chr3.3:32962424-32962443 None:intergenic 30.0%
AATTGTGCTCATGAACGTAA+AGG + chr3.3:32962717-32962736 MS.gene89391:CDS 35.0%
ACAAACATGGCCAAGAAATT+TGG + chr3.3:32962117-32962136 MS.gene89391:CDS 35.0%
AGAAATTGAGGTGAAACACA+TGG + chr3.3:32962392-32962411 MS.gene89391:CDS 35.0%
AGATGAAACGATTGCATAAG+AGG + chr3.3:32962655-32962674 MS.gene89391:CDS 35.0%
ATTGTGCTCATGAACGTAAA+GGG + chr3.3:32962718-32962737 MS.gene89391:CDS 35.0%
CAATAATAAAGCCTTGATGC+TGG - chr3.3:32962811-32962830 None:intergenic 35.0%
CAATAATGGTAGGCCTATTT+AGG - chr3.3:32962239-32962258 None:intergenic 35.0%
CTAAATAGGCCTACCATTAT+TGG + chr3.3:32962237-32962256 MS.gene89391:CDS 35.0%
GAAAAAAGGTGAATCGATTG+AGG + chr3.3:32962437-32962456 MS.gene89391:CDS 35.0%
GAGTTGTGCAATAACAAACA+TGG + chr3.3:32962473-32962492 MS.gene89391:CDS 35.0%
GCGTTTCTTCTTAGAGATAT+TGG + chr3.3:32961949-32961968 MS.gene89391:CDS 35.0%
GTCAAAGGAGTTTAAGGAAA+TGG + chr3.3:32962545-32962564 MS.gene89391:CDS 35.0%
GTCCTAAATGGAAACTACTT+AGG + chr3.3:32962310-32962329 MS.gene89391:CDS 35.0%
TAAGTTGCACCAATAATGGT+AGG - chr3.3:32962249-32962268 None:intergenic 35.0%
TGAGATCCATTCATGAGTTT+GGG + chr3.3:32962415-32962434 MS.gene89391:CDS 35.0%
TTAACAACCTTACACATGCT+TGG + chr3.3:32962336-32962355 MS.gene89391:CDS 35.0%
TTCATCTCACACTTCTTCAT+AGG + chr3.3:32961991-32962010 MS.gene89391:CDS 35.0%
TTTGGTAGAACACCAAGAAT+TGG - chr3.3:32962069-32962088 None:intergenic 35.0%
! CACATTTGCCCAATTTTGAA+GGG - chr3.3:32962370-32962389 None:intergenic 35.0%
! CATGATTGGTCCAAATTTCT+TGG - chr3.3:32962130-32962149 None:intergenic 35.0%
! GGTGATTTTGTACCTTTCAT+TGG + chr3.3:32962603-32962622 MS.gene89391:CDS 35.0%
! TCACATTTGCCCAATTTTGA+AGG - chr3.3:32962371-32962390 None:intergenic 35.0%
!! ATTGATTTGGAAGGTGTAGT+GGG + chr3.3:32962630-32962649 MS.gene89391:CDS 35.0%
!! ATTGGTTGGATTGATTTGGA+AGG + chr3.3:32962621-32962640 MS.gene89391:CDS 35.0%
!! CAGCATCAAGGCTTTATTAT+TGG + chr3.3:32962809-32962828 MS.gene89391:CDS 35.0%
AAAGGTGAATCGATTGAGGT+TGG + chr3.3:32962441-32962460 MS.gene89391:CDS 40.0%
AAGTAAAGGGCAAGAGTCAA+AGG + chr3.3:32962530-32962549 MS.gene89391:CDS 40.0%
ATGTTTGTGAGTGTGACATG+AGG - chr3.3:32962105-32962124 None:intergenic 40.0%
GCAAGAGTCAAAGGAGTTTA+AGG + chr3.3:32962539-32962558 MS.gene89391:CDS 40.0%
GGAGTTTAAGGAAATGGTTG+TGG + chr3.3:32962551-32962570 MS.gene89391:CDS 40.0%
GGCAAATGTGAGAGAAATTG+AGG + chr3.3:32962380-32962399 MS.gene89391:CDS 40.0%
GTGAGATCCATTCATGAGTT+TGG + chr3.3:32962414-32962433 MS.gene89391:CDS 40.0%
GTGGAGTTCATGACAATATC+TGG + chr3.3:32962570-32962589 MS.gene89391:CDS 40.0%
TCATGTCACACTCACAAACA+TGG + chr3.3:32962104-32962123 MS.gene89391:CDS 40.0%
! ACTTCTAAAAATCTCCCACC+TGG + chr3.3:32962030-32962049 MS.gene89391:CDS 40.0%
!! CTTGGTGTTCTACCAAACTT+GGG + chr3.3:32962072-32962091 MS.gene89391:CDS 40.0%
!! GATTGATTTGGAAGGTGTAG+TGG + chr3.3:32962629-32962648 MS.gene89391:CDS 40.0%
!! TCTTGGTGTTCTACCAAACT+TGG + chr3.3:32962071-32962090 MS.gene89391:CDS 40.0%
ACAACCTTACACATGCTTGG+TGG + chr3.3:32962339-32962358 MS.gene89391:CDS 45.0%
ATTGAGCTTGTCCAGCATCA+AGG + chr3.3:32962797-32962816 MS.gene89391:CDS 45.0%
CAACCTTACACATGCTTGGT+GGG + chr3.3:32962340-32962359 MS.gene89391:CDS 45.0%
CAAGAATTGGCCATCCTCTT+GGG - chr3.3:32962056-32962075 None:intergenic 45.0%
TGGGAAGGCCCTTCAAAATT+GGG + chr3.3:32962359-32962378 MS.gene89391:CDS 45.0%
AATGGGCACTTGTGACACTG+TGG + chr3.3:32962158-32962177 MS.gene89391:CDS 50.0%
AGAAACGCTCTAGCTGCATG+TGG - chr3.3:32962195-32962214 None:intergenic 50.0%
CCAAGAATTGGCCATCCTCT+TGG - chr3.3:32962057-32962076 None:intergenic 50.0%
CCAAGAGGATGGCCAATTCT+TGG + chr3.3:32962054-32962073 MS.gene89391:CDS 50.0%
CTTCCCACCAAGCATGTGTA+AGG - chr3.3:32962346-32962365 None:intergenic 50.0%
GAAACGCTCTAGCTGCATGT+GGG - chr3.3:32962194-32962213 None:intergenic 50.0%
GGTGAATCGATTGAGGTTGG+TGG + chr3.3:32962444-32962463 MS.gene89391:CDS 50.0%
GTGGGAAGGCCCTTCAAAAT+TGG + chr3.3:32962358-32962377 MS.gene89391:CDS 50.0%
TGAGGCATGGTTCCCAAGTT+TGG - chr3.3:32962087-32962106 None:intergenic 50.0%
TGTGAGTGTGACATGAGGCA+TGG - chr3.3:32962100-32962119 None:intergenic 50.0%
! CTTACACATGCTTGGTGGGA+AGG + chr3.3:32962344-32962363 MS.gene89391:CDS 50.0%
AATCTCCCACCTGGCCCAAG+AGG + chr3.3:32962039-32962058 MS.gene89391:CDS 60.0%
ATTGGCCATCCTCTTGGGCC+AGG - chr3.3:32962051-32962070 None:intergenic 60.0%
GCCATCCTCTTGGGCCAGGT+GGG - chr3.3:32962047-32962066 None:intergenic 65.0%
TCCCACCTGGCCCAAGAGGA+TGG + chr3.3:32962043-32962062 MS.gene89391:CDS 65.0%
GGCCATCCTCTTGGGCCAGG+TGG - chr3.3:32962048-32962067 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 32961937 32962878 32961937 ID=MS.gene89391
chr3.3 mRNA 32961937 32962878 32961937 ID=MS.gene89391.t1;Parent=MS.gene89391
chr3.3 exon 32961937 32962878 32961937 ID=MS.gene89391.t1.exon1;Parent=MS.gene89391.t1
chr3.3 CDS 32961937 32962878 32961937 ID=cds.MS.gene89391.t1;Parent=MS.gene89391.t1
Gene Sequence

>MS.gene89391

ATGGCTTTTGATGCGTTTCTTCTTAGAGATATTGGTATTGCCATTTTCATCTTCTTCATCTCACACTTCTTCATAGGCTTGATTCTTAGAAACACTTCTAAAAATCTCCCACCTGGCCCAAGAGGATGGCCAATTCTTGGTGTTCTACCAAACTTGGGAACCATGCCTCATGTCACACTCACAAACATGGCCAAGAAATTTGGACCAATCATGTATCTTAAAATGGGCACTTGTGACACTGTGGTTGCTTCAAGCCCACATGCAGCTAGAGCGTTTCTCAAGACTTTAGACCATAATTTCCTAAATAGGCCTACCATTATTGGTGCAACTTATTTAGGCTACAATTCACAAGACCTTGTTTTTGCAAAATATGGTCCTAAATGGAAACTACTTAGGAAATTAACAACCTTACACATGCTTGGTGGGAAGGCCCTTCAAAATTGGGCAAATGTGAGAGAAATTGAGGTGAAACACATGGTGAGATCCATTCATGAGTTTGGGAAAAAAGGTGAATCGATTGAGGTTGGTGGTTTGTTGAGTTGTGCAATAACAAACATGGTGAGCCAAGTTGTATTAAGCAAACGTATGTTTGCAAGTAAAGGGCAAGAGTCAAAGGAGTTTAAGGAAATGGTTGTGGAGTTCATGACAATATCTGGAATCAACATTGGTGATTTTGTACCTTTCATTGGTTGGATTGATTTGGAAGGTGTAGTGGGTAAGATGAAACGATTGCATAAGAGGTTTGATGTGTTTTTGACCAAATTGATTGAAGATCATGTGAATTGTGCTCATGAACGTAAAGGGAATCCAGATTTTTTGGATATTGTTTTGGCAAATGATGATGATAATTTTGGTGAGAGATTGAGCTTGTCCAGCATCAAGGCTTTATTATTGGTACTTCTCTCTTTCCCAGCTACCACTTTATCTTATTTGTCAATATAA
Protein sequence

>MS.gene89391.t1

MAFDAFLLRDIGIAIFIFFISHFFIGLILRNTSKNLPPGPRGWPILGVLPNLGTMPHVTLTNMAKKFGPIMYLKMGTCDTVVASSPHAARAFLKTLDHNFLNRPTIIGATYLGYNSQDLVFAKYGPKWKLLRKLTTLHMLGGKALQNWANVREIEVKHMVRSIHEFGKKGESIEVGGLLSCAITNMVSQVVLSKRMFASKGQESKEFKEMVVEFMTISGINIGDFVPFIGWIDLEGVVGKMKRLHKRFDVFLTKLIEDHVNCAHERKGNPDFLDIVLANDDDNFGERLSLSSIKALLLVLLSFPATTLSYLSI