Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050521.t1 | XP_003626432.1 | 96.8 | 344 | 10 | 1 | 1 | 344 | 1 | 343 | 1.70E-192 | 681.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050521.t1 | C6TBN2 | 68.8 | 340 | 105 | 1 | 4 | 343 | 2 | 340 | 1.2e-135 | 484.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050521.t1 | G7L1V2 | 96.8 | 344 | 10 | 1 | 1 | 344 | 1 | 343 | 1.2e-192 | 681.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049261 | MS.gene050521 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene050521 | MS.gene051538 | 0.807576 | 4.73E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene058015 | 0.816895 | 4.37E-52 | -1.69E-46 |
| MS.gene050521 | MS.gene060076 | 0.801187 | 1.01E-48 | -1.69E-46 |
| MS.gene050521 | MS.gene063145 | 0.818964 | 1.49E-52 | -1.69E-46 |
| MS.gene050521 | MS.gene063501 | 0.82 | 8.64E-53 | -1.69E-46 |
| MS.gene050521 | MS.gene063674 | 0.80808 | 3.69E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene064518 | 0.804921 | 1.71E-49 | -1.69E-46 |
| MS.gene050521 | MS.gene069804 | 0.804493 | 2.10E-49 | -1.69E-46 |
| MS.gene050521 | MS.gene070795 | 0.824556 | 7.57E-54 | -1.69E-46 |
| MS.gene050521 | MS.gene09162 | 0.82663 | 2.44E-54 | -1.69E-46 |
| MS.gene050521 | MS.gene22308 | 0.806576 | 7.69E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene24298 | 0.818738 | 1.68E-52 | -1.69E-46 |
| MS.gene050521 | MS.gene26474 | 0.802681 | 5.00E-49 | -1.69E-46 |
| MS.gene050521 | MS.gene26941 | 0.835201 | 1.93E-56 | -1.69E-46 |
| MS.gene050521 | MS.gene27333 | 0.85145 | 8.81E-61 | -1.69E-46 |
| MS.gene050521 | MS.gene27943 | 0.801246 | 9.86E-49 | -1.69E-46 |
| MS.gene050521 | MS.gene28551 | 0.809475 | 1.86E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene46537 | 0.804119 | 2.52E-49 | -1.69E-46 |
| MS.gene050521 | MS.gene47902 | 0.810568 | 1.08E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene53428 | 0.816109 | 6.55E-52 | -1.69E-46 |
| MS.gene050521 | MS.gene53461 | 0.816495 | 5.37E-52 | -1.69E-46 |
| MS.gene050521 | MS.gene53779 | 0.802444 | 5.59E-49 | -1.69E-46 |
| MS.gene050521 | MS.gene57110 | 0.840399 | 8.90E-58 | -1.69E-46 |
| MS.gene050521 | MS.gene58249 | 0.808123 | 3.61E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene59144 | 0.839834 | 1.25E-57 | -1.69E-46 |
| MS.gene050521 | MS.gene59487 | 0.815373 | 9.56E-52 | -1.69E-46 |
| MS.gene050521 | MS.gene62991 | 0.836911 | 7.09E-57 | -1.69E-46 |
| MS.gene050521 | MS.gene67222 | 0.808857 | 2.52E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene67231 | 0.820231 | 7.65E-53 | -1.69E-46 |
| MS.gene050521 | MS.gene67504 | 0.801398 | 9.18E-49 | -1.69E-46 |
| MS.gene050521 | MS.gene67684 | 0.807598 | 4.67E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene68200 | 0.816993 | 4.15E-52 | -1.69E-46 |
| MS.gene050521 | MS.gene68793 | 0.817089 | 3.95E-52 | -1.69E-46 |
| MS.gene050521 | MS.gene76221 | 0.809904 | 1.50E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene76405 | 0.820157 | 7.96E-53 | -1.69E-46 |
| MS.gene050521 | MS.gene79116 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene050521 | MS.gene80717 | 0.801347 | 9.40E-49 | -1.69E-46 |
| MS.gene050521 | MS.gene83133 | 0.837488 | 5.05E-57 | -1.69E-46 |
| MS.gene050521 | MS.gene83692 | 0.821612 | 3.68E-53 | -1.69E-46 |
| MS.gene050521 | MS.gene87144 | 0.863027 | 3.34E-64 | -1.69E-46 |
| MS.gene050521 | MS.gene89391 | 0.8066 | 7.60E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050521.t1 | MTR_7g114970 | 96.802 | 344 | 10 | 1 | 1 | 344 | 1 | 343 | 0.0 | 692 |
| MS.gene050521.t1 | MTR_7g114970 | 97.552 | 286 | 6 | 1 | 1 | 286 | 1 | 285 | 0.0 | 580 |
| MS.gene050521.t1 | MTR_7g114970 | 97.544 | 285 | 6 | 1 | 1 | 285 | 1 | 284 | 0.0 | 577 |
| MS.gene050521.t1 | MTR_7g114970 | 96.386 | 249 | 9 | 0 | 96 | 344 | 1 | 249 | 0.0 | 508 |
| MS.gene050521.t1 | MTR_7g114980 | 68.142 | 339 | 103 | 3 | 9 | 343 | 12 | 349 | 1.48e-173 | 486 |
| MS.gene050521.t1 | MTR_1g102750 | 63.422 | 339 | 122 | 2 | 6 | 343 | 3 | 340 | 5.34e-170 | 476 |
| MS.gene050521.t1 | MTR_7g114990 | 66.469 | 337 | 108 | 4 | 8 | 343 | 13 | 345 | 3.96e-167 | 469 |
| MS.gene050521.t1 | MTR_7g115010 | 63.422 | 339 | 104 | 4 | 8 | 343 | 9 | 330 | 8.03e-153 | 432 |
| MS.gene050521.t1 | MTR_7g114980 | 70.922 | 282 | 77 | 3 | 9 | 286 | 12 | 292 | 1.39e-148 | 420 |
| MS.gene050521.t1 | MTR_7g114970 | 97.537 | 203 | 4 | 1 | 1 | 203 | 1 | 202 | 2.41e-145 | 409 |
| MS.gene050521.t1 | MTR_7g114970 | 96.020 | 201 | 8 | 0 | 144 | 344 | 1 | 201 | 5.87e-145 | 407 |
| MS.gene050521.t1 | MTR_1g102750 | 64.789 | 284 | 98 | 2 | 6 | 288 | 3 | 285 | 6.28e-145 | 411 |
| MS.gene050521.t1 | MTR_7g021850 | 56.716 | 335 | 137 | 5 | 8 | 341 | 4 | 331 | 1.38e-133 | 384 |
| MS.gene050521.t1 | MTR_7g021680 | 56.716 | 335 | 137 | 6 | 8 | 341 | 4 | 331 | 6.66e-132 | 380 |
| MS.gene050521.t1 | MTR_7g021820 | 56.716 | 335 | 137 | 6 | 8 | 341 | 4 | 331 | 6.66e-132 | 380 |
| MS.gene050521.t1 | MTR_7g021825 | 57.823 | 147 | 60 | 2 | 163 | 308 | 15 | 160 | 2.09e-57 | 183 |
| MS.gene050521.t1 | MTR_1g102740 | 59.633 | 109 | 43 | 1 | 235 | 343 | 1 | 108 | 2.65e-42 | 143 |
| MS.gene050521.t1 | MTR_7g021670 | 55.039 | 129 | 56 | 2 | 8 | 136 | 4 | 130 | 1.20e-41 | 146 |
| MS.gene050521.t1 | MTR_7g021670 | 44.444 | 108 | 49 | 3 | 237 | 341 | 146 | 245 | 3.88e-23 | 97.1 |
| MS.gene050521.t1 | MTR_1g047250 | 30.492 | 305 | 188 | 9 | 13 | 302 | 6 | 301 | 3.59e-28 | 112 |
| MS.gene050521.t1 | MTR_7g067855 | 40.141 | 142 | 49 | 3 | 237 | 343 | 15 | 155 | 1.74e-25 | 100 |
| MS.gene050521.t1 | MTR_3g449790 | 28.049 | 328 | 189 | 12 | 10 | 312 | 37 | 342 | 4.05e-24 | 101 |
| MS.gene050521.t1 | MTR_3g449790 | 28.354 | 328 | 194 | 12 | 10 | 312 | 37 | 348 | 5.32e-24 | 101 |
| MS.gene050521.t1 | MTR_4g092750 | 30.268 | 261 | 160 | 7 | 12 | 256 | 5 | 259 | 3.52e-23 | 97.8 |
| MS.gene050521.t1 | MTR_4g092750 | 30.268 | 261 | 160 | 7 | 12 | 256 | 5 | 259 | 4.55e-23 | 98.2 |
| MS.gene050521.t1 | MTR_4g092750 | 30.268 | 261 | 160 | 7 | 12 | 256 | 5 | 259 | 7.12e-23 | 97.1 |
| MS.gene050521.t1 | MTR_1g042730 | 28.446 | 341 | 176 | 11 | 12 | 300 | 65 | 389 | 1.33e-22 | 98.2 |
| MS.gene050521.t1 | MTR_8g088160 | 29.070 | 258 | 136 | 11 | 18 | 235 | 49 | 299 | 4.40e-19 | 87.0 |
| MS.gene050521.t1 | MTR_3g092140 | 24.925 | 333 | 203 | 14 | 10 | 316 | 38 | 349 | 9.10e-19 | 87.4 |
| MS.gene050521.t1 | MTR_7g021685 | 52.308 | 65 | 31 | 0 | 8 | 72 | 4 | 68 | 8.47e-17 | 75.9 |
| MS.gene050521.t1 | MTR_6g035180 | 48.276 | 58 | 30 | 0 | 286 | 343 | 7 | 64 | 1.67e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050521.t1 | AT1G60690 | 59.172 | 338 | 133 | 4 | 5 | 341 | 4 | 337 | 1.62e-141 | 404 |
| MS.gene050521.t1 | AT1G60710 | 60.000 | 335 | 129 | 4 | 8 | 341 | 7 | 337 | 2.05e-139 | 399 |
| MS.gene050521.t1 | AT1G60680 | 57.738 | 336 | 138 | 3 | 7 | 341 | 6 | 338 | 4.46e-138 | 396 |
| MS.gene050521.t1 | AT1G60750 | 56.891 | 341 | 128 | 3 | 1 | 341 | 1 | 322 | 1.56e-137 | 394 |
| MS.gene050521.t1 | AT1G60730 | 56.716 | 335 | 140 | 4 | 8 | 341 | 7 | 337 | 3.77e-134 | 386 |
| MS.gene050521.t1 | AT1G60730 | 53.521 | 355 | 140 | 5 | 8 | 341 | 7 | 357 | 3.08e-129 | 374 |
| MS.gene050521.t1 | AT1G10810 | 55.821 | 335 | 143 | 4 | 8 | 341 | 7 | 337 | 5.48e-129 | 373 |
| MS.gene050521.t1 | AT1G10810 | 56.716 | 268 | 111 | 4 | 75 | 341 | 22 | 285 | 5.14e-103 | 305 |
| MS.gene050521.t1 | AT1G60680 | 63.877 | 227 | 81 | 1 | 7 | 232 | 6 | 232 | 1.60e-101 | 299 |
| MS.gene050521.t1 | AT1G10810 | 60.515 | 233 | 90 | 2 | 8 | 239 | 7 | 238 | 1.33e-95 | 285 |
| MS.gene050521.t1 | AT1G60730 | 55.714 | 140 | 61 | 1 | 8 | 147 | 7 | 145 | 4.62e-47 | 157 |
| MS.gene050521.t1 | AT1G04690 | 29.180 | 305 | 192 | 9 | 13 | 302 | 6 | 301 | 9.57e-28 | 111 |
| MS.gene050521.t1 | AT1G06690 | 28.487 | 337 | 205 | 12 | 10 | 323 | 48 | 371 | 8.61e-26 | 106 |
| MS.gene050521.t1 | AT4G33670 | 27.389 | 314 | 194 | 10 | 13 | 313 | 9 | 301 | 7.81e-25 | 103 |
| MS.gene050521.t1 | AT1G04420 | 26.426 | 333 | 193 | 10 | 12 | 300 | 60 | 384 | 6.38e-20 | 90.5 |
| MS.gene050521.t1 | AT2G21250 | 26.871 | 294 | 155 | 8 | 46 | 313 | 29 | 288 | 2.02e-13 | 70.5 |
| MS.gene050521.t1 | AT2G21260 | 25.926 | 297 | 154 | 9 | 46 | 313 | 29 | 288 | 1.09e-12 | 68.2 |
Find 81 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGTTTGGGATTGTCAAAA+TGG | 0.230952 | 7.4:+2502180 | MS.gene050521:CDS |
| ATTCAGATTGCCACTAAGTT+TGG | 0.254419 | 7.4:+2502166 | MS.gene050521:CDS |
| CAGATATTGTTCCCCTTTGC+AGG | 0.291842 | 7.4:+2502581 | MS.gene050521:CDS |
| CAACATGATCGAACGTATTC+AGG | 0.315662 | 7.4:-2502232 | None:intergenic |
| AAAGATATGGCAACATCTTC+TGG | 0.320111 | 7.4:-2501902 | None:intergenic |
| AGGGTAGTCTTCAACGTCTT+GGG | 0.329622 | 7.4:+2502257 | MS.gene050521:CDS |
| TCTGGTAACGTTGTAGTAAA+TGG | 0.332352 | 7.4:+2502205 | MS.gene050521:CDS |
| TCCCCTGCCACCTCAGATAT+TGG | 0.333050 | 7.4:-2506108 | None:intergenic |
| CAGGTTTCTAAGCTTGGATA+TGG | 0.339873 | 7.4:+2501842 | MS.gene050521:intron |
| CTGCAAAGGGGAACAATATC+TGG | 0.344620 | 7.4:-2502580 | None:intergenic |
| TCCAAATGGAATGGTCTCTT+TGG | 0.345011 | 7.4:+2502542 | MS.gene050521:CDS |
| TGCACATACCAATGAAGTTT+TGG | 0.361334 | 7.4:+2501982 | MS.gene050521:CDS |
| CTTTCCGACCAAAACTTCAT+TGG | 0.365610 | 7.4:-2501990 | None:intergenic |
| TACTTGCAGGTTTCTAAGCT+TGG | 0.367379 | 7.4:+2501836 | MS.gene050521:intron |
| TTCAGATTGCCACTAAGTTT+GGG | 0.369267 | 7.4:+2502167 | MS.gene050521:CDS |
| TTTGACAATCCCAAACTTAG+TGG | 0.372113 | 7.4:-2502176 | None:intergenic |
| GCAATCTGAATTTGATCTCT+TGG | 0.378904 | 7.4:-2502154 | None:intergenic |
| GGGATTGTCAAAATGGAATC+TGG | 0.379653 | 7.4:+2502187 | MS.gene050521:CDS |
| GTGGCAGGGGATCGGACAAC+TGG | 0.395304 | 7.4:+2506120 | MS.gene050521:CDS |
| AGCATGTTTGATCAAAGATA+TGG | 0.406589 | 7.4:-2501915 | None:intergenic |
| TCCATTTGGACAGCAGTAAT+GGG | 0.412943 | 7.4:-2502529 | None:intergenic |
| ATCAAAGAAAGTGATTCCTT+TGG | 0.413751 | 7.4:-2501942 | None:intergenic |
| TCCAAAGAGACCATTCCATT+TGG | 0.433487 | 7.4:-2502543 | None:intergenic |
| ACTCAACAAAGATGATTTGA+AGG | 0.433839 | 7.4:+2506068 | MS.gene050521:CDS |
| TTCCATTTGGACAGCAGTAA+TGG | 0.433941 | 7.4:-2502530 | None:intergenic |
| CTTAAGAAGTTGGTTGAAGA+GGG | 0.435310 | 7.4:+2502439 | MS.gene050521:CDS |
| TCCCATTACTGCTGTCCAAA+TGG | 0.437772 | 7.4:+2502528 | MS.gene050521:CDS |
| GATGGGAGAGCTTAAGAAGT+TGG | 0.438930 | 7.4:+2502429 | MS.gene050521:intron |
| CTTCACAACTTGCTCTTGCA+TGG | 0.444626 | 7.4:+2505752 | MS.gene050521:CDS |
| GCTTAAGAAGTTGGTTGAAG+AGG | 0.453021 | 7.4:+2502438 | MS.gene050521:CDS |
| GAGGGTAGTCTTCAACGTCT+TGG | 0.455629 | 7.4:+2502256 | MS.gene050521:CDS |
| ATCAGTTAGGTACCTGCAAA+GGG | 0.462136 | 7.4:-2502593 | None:intergenic |
| CCTTACAGTCCCCTTGGCCG+TGG | 0.464143 | 7.4:+2505322 | MS.gene050521:CDS |
| ATCAAACATGCTTTCTCCAA+AGG | 0.464584 | 7.4:+2501926 | MS.gene050521:CDS |
| TTATCATCGGATGGAAAAGT+TGG | 0.465236 | 7.4:+2505705 | MS.gene050521:CDS |
| TATGGATGCATGGGCCTCAC+TGG | 0.467969 | 7.4:+2501860 | MS.gene050521:CDS |
| GACAACTCTTACAGGGAACT+TGG | 0.479074 | 7.4:+2505286 | MS.gene050521:intron |
| CATATTCCTCGGGTGAAGCT+TGG | 0.479903 | 7.4:+2501725 | MS.gene050521:CDS |
| GCAATGCAACCAAGGTTACA+AGG | 0.480835 | 7.4:+2505655 | MS.gene050521:CDS |
| ATACTACTATTCATATTCCT+CGG | 0.483116 | 7.4:+2501714 | MS.gene050521:CDS |
| CGTTTCTTACTTCTAAGCCT+TGG | 0.483161 | 7.4:-2501751 | None:intergenic |
| GCCAATATCTGAGGTGGCAG+GGG | 0.494835 | 7.4:+2506107 | MS.gene050521:CDS |
| TTACTCACAGTGTCCTCAAT+GGG | 0.500470 | 7.4:-2502328 | None:intergenic |
| TACTACTATTCATATTCCTC+GGG | 0.501777 | 7.4:+2501715 | MS.gene050521:CDS |
| GGAAAGTTACTCACCAGGGA+TGG | 0.508635 | 7.4:-2505803 | None:intergenic |
| CCACGGCCAAGGGGACTGTA+AGG | 0.509324 | 7.4:-2505322 | None:intergenic |
| GACGATGTAGTGCCCATCCC+TGG | 0.510769 | 7.4:+2505790 | MS.gene050521:CDS |
| ATTACTCACAGTGTCCTCAA+TGG | 0.516227 | 7.4:-2502329 | None:intergenic |
| GAGGGAAAGATTAAGTACAT+AGG | 0.518621 | 7.4:+2502457 | MS.gene050521:CDS |
| TCTTACAGGGAACTTGGCAT+TGG | 0.523565 | 7.4:+2505292 | MS.gene050521:intron |
| TGGGAACAGTGGTGTCAATA+CGG | 0.535040 | 7.4:-2502309 | None:intergenic |
| GTGCCAATATCTGAGGTGGC+AGG | 0.535767 | 7.4:+2506105 | MS.gene050521:CDS |
| AATCAGTTAGGTACCTGCAA+AGG | 0.537749 | 7.4:-2502594 | None:intergenic |
| TGCCAATATCTGAGGTGGCA+GGG | 0.538436 | 7.4:+2506106 | MS.gene050521:CDS |
| TGACACCACTGTTCCCATTG+AGG | 0.539838 | 7.4:+2502315 | MS.gene050521:CDS |
| AAGCTTGGATATGGATGCAT+GGG | 0.540210 | 7.4:+2501851 | MS.gene050521:CDS |
| CTTGCATGGATTCTTCATCA+AGG | 0.547230 | 7.4:+2505766 | MS.gene050521:CDS |
| TATCTGAGGTGGCAGGGGAT+CGG | 0.548088 | 7.4:+2506112 | MS.gene050521:CDS |
| CGGGTGAAGCTTGGAAGCCA+AGG | 0.550725 | 7.4:+2501734 | MS.gene050521:CDS |
| TAAGCTTGGATATGGATGCA+TGG | 0.565954 | 7.4:+2501850 | MS.gene050521:CDS |
| TCGGATGGAAAAGTTGGCAC+AGG | 0.579387 | 7.4:+2505711 | MS.gene050521:CDS |
| ATAGTGCCTTACAGTCCCCT+TGG | 0.580787 | 7.4:+2505316 | MS.gene050521:CDS |
| TTCACCAGGCAATGCAACCA+AGG | 0.582900 | 7.4:+2505647 | MS.gene050521:intron |
| GAAAGTTACTCACCAGGGAT+GGG | 0.588008 | 7.4:-2505802 | None:intergenic |
| TACGTTCGATCATGTTGTGA+GGG | 0.601109 | 7.4:+2502238 | MS.gene050521:CDS |
| CAATGCAACCAAGGTTACAA+GGG | 0.603737 | 7.4:+2505656 | MS.gene050521:CDS |
| TTACTGCTGTCCAAATGGAA+TGG | 0.605560 | 7.4:+2502533 | MS.gene050521:CDS |
| CTAGTACTGATACAATCAGA+AGG | 0.606846 | 7.4:+2502491 | MS.gene050521:CDS |
| GGGTAGTCTTCAACGTCTTG+GGG | 0.616325 | 7.4:+2502258 | MS.gene050521:CDS |
| CATACCAGAAAACTGTCTGC+AGG | 0.620973 | 7.4:-2505379 | None:intergenic |
| TGGCTTCCAAGCTTCACCCG+AGG | 0.642698 | 7.4:-2501731 | None:intergenic |
| TAAGTACATAGGATTATCTG+AGG | 0.653859 | 7.4:+2502468 | MS.gene050521:CDS |
| AGTGTCCTCAATGGGAACAG+TGG | 0.665325 | 7.4:-2502320 | None:intergenic |
| AAGTTGGCACAGGAGAAGCA+TGG | 0.666692 | 7.4:+2505721 | MS.gene050521:CDS |
| TGCTGTGCCAATATCTGAGG+TGG | 0.671972 | 7.4:+2506101 | MS.gene050521:CDS |
| ATACGTTCGATCATGTTGTG+AGG | 0.673151 | 7.4:+2502237 | MS.gene050521:CDS |
| AATGCAACCAAGGTTACAAG+GGG | 0.675322 | 7.4:+2505657 | MS.gene050521:CDS |
| TAGTACTGATACAATCAGAA+GGG | 0.683169 | 7.4:+2502492 | MS.gene050521:CDS |
| AGATGCTGTGCCAATATCTG+AGG | 0.705973 | 7.4:+2506098 | MS.gene050521:CDS |
| TCAGTTAGGTACCTGCAAAG+GGG | 0.723528 | 7.4:-2502592 | None:intergenic |
| CAGCGTTGTATACTCCAGTG+AGG | 0.755691 | 7.4:-2501874 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTCAAATAATTTCATC+TGG | - | chr7.4:2505928-2505947 | None:intergenic | 15.0% |
| !! | ATTGTTTATATTCAAACATT+TGG | - | chr7.4:2505506-2505525 | None:intergenic | 15.0% |
| !! | TAAAGTAAAACAAACATTAA+GGG | + | chr7.4:2504923-2504942 | MS.gene050521:intron | 15.0% |
| !! | TTAAAGTAAAACAAACATTA+AGG | + | chr7.4:2504922-2504941 | MS.gene050521:intron | 15.0% |
| !!! | AATTTATTTCTCTCTTTTTT+GGG | - | chr7.4:2504609-2504628 | None:intergenic | 15.0% |
| !!! | TAAACATTTTAAAAATTCTC+AGG | + | chr7.4:2502117-2502136 | MS.gene050521:intron | 15.0% |
| !!! | TGTAATTTTTGCAAAAATTA+AGG | - | chr7.4:2502705-2502724 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTATCAAGCA+AGG | + | chr7.4:2502898-2502917 | MS.gene050521:intron | 15.0% |
| !! | AAAAAGAAAATCAATCAGTT+AGG | - | chr7.4:2502609-2502628 | None:intergenic | 20.0% |
| !! | AACAAAAGAAATCATAATTG+AGG | - | chr7.4:2505958-2505977 | None:intergenic | 20.0% |
| !! | AAGGAAATTCATTAAAAAAC+AGG | + | chr7.4:2502917-2502936 | MS.gene050521:intron | 20.0% |
| !! | ATGTCAAAAACCATTAAATT+AGG | - | chr7.4:2505226-2505245 | None:intergenic | 20.0% |
| !! | TCTTTCAATTCCTAATTTAA+TGG | + | chr7.4:2505213-2505232 | MS.gene050521:intron | 20.0% |
| !!! | AATTTTTGCAAAAATTAAGG+TGG | - | chr7.4:2502702-2502721 | None:intergenic | 20.0% |
| !!! | ATCTATTCTTGAAATTTGTT+AGG | + | chr7.4:2502358-2502377 | MS.gene050521:intron | 20.0% |
| !!! | CAATTTATTTCTCTCTTTTT+TGG | - | chr7.4:2504610-2504629 | None:intergenic | 20.0% |
| !!! | GGTATCTTAAATTTTACATT+AGG | + | chr7.4:2502818-2502837 | MS.gene050521:intron | 20.0% |
| ! | AAACATTGTCAATAATTCTC+AGG | - | chr7.4:2501811-2501830 | None:intergenic | 25.0% |
| ! | AAACATTTATGAGACTGTTT+AGG | - | chr7.4:2505557-2505576 | None:intergenic | 25.0% |
| ! | AAGTAAAACTATTCGATCAA+AGG | - | chr7.4:2505148-2505167 | None:intergenic | 25.0% |
| ! | AATTCATTAAAAAACAGGAG+AGG | + | chr7.4:2502922-2502941 | MS.gene050521:intron | 25.0% |
| ! | ATACTACTATTCATATTCCT+CGG | + | chr7.4:2501714-2501733 | MS.gene050521:CDS | 25.0% |
| ! | ATTTCGAGAAAGAATTGTAA+AGG | - | chr7.4:2505249-2505268 | None:intergenic | 25.0% |
| ! | GATTCATAACATAATTTCTG+AGG | - | chr7.4:2503597-2503616 | None:intergenic | 25.0% |
| ! | GTATTCATACTCAAATCAAA+AGG | - | chr7.4:2505184-2505203 | None:intergenic | 25.0% |
| ! | TGAACATTCAGATTATACAA+GGG | - | chr7.4:2505870-2505889 | None:intergenic | 25.0% |
| ! | TTATTCTTCAACATTCAACT+TGG | - | chr7.4:2504329-2504348 | None:intergenic | 25.0% |
| ! | TTGAACATTCAGATTATACA+AGG | - | chr7.4:2505871-2505890 | None:intergenic | 25.0% |
| ! | TTGTATAATCTGAATGTTCA+AGG | + | chr7.4:2505870-2505889 | MS.gene050521:intron | 25.0% |
| ! | TTTCTAAGTTCTGCATAAAA+AGG | - | chr7.4:2504836-2504855 | None:intergenic | 25.0% |
| !! | AAAAATTGAGATTTTCGACT+TGG | - | chr7.4:2502776-2502795 | None:intergenic | 25.0% |
| !! | ATTTTGCGATTTCATAACTT+GGG | + | chr7.4:2504868-2504887 | MS.gene050521:intron | 25.0% |
| !! | GTTCATTTGAGTTTATTTAC+TGG | - | chr7.4:2505583-2505602 | None:intergenic | 25.0% |
| !! | TAGTTGACTTTAATTAGTGT+TGG | + | chr7.4:2504668-2504687 | MS.gene050521:intron | 25.0% |
| !! | TATGGACTAATCTTTGTTAA+AGG | - | chr7.4:2502954-2502973 | None:intergenic | 25.0% |
| !! | TATTTTGCGATTTCATAACT+TGG | + | chr7.4:2504867-2504886 | MS.gene050521:intron | 25.0% |
| !! | TCCATAGAAATTCTAGAAAA+AGG | + | chr7.4:2502968-2502987 | MS.gene050521:intron | 25.0% |
| !! | TTAAGATTGTTAGCTTAGTT+AGG | - | chr7.4:2504710-2504729 | None:intergenic | 25.0% |
| !!! | AATTTATTTTGAATGGTGCT+TGG | - | chr7.4:2504188-2504207 | None:intergenic | 25.0% |
| !!! | ACTCTAATACCATGATTTTT+TGG | + | chr7.4:2504557-2504576 | MS.gene050521:intron | 25.0% |
| !!! | ATAGTTTTACTTGCTTGAAT+TGG | + | chr7.4:2505156-2505175 | MS.gene050521:intron | 25.0% |
| !!! | ATTATTTGGAGTTGATAGAA+TGG | + | chr7.4:2504642-2504661 | MS.gene050521:intron | 25.0% |
| !!! | ATTGTTAGTGGTTTTAGAAA+TGG | + | chr7.4:2505046-2505065 | MS.gene050521:intron | 25.0% |
| !!! | ATTTTGTGCATTTTTAGCTA+AGG | + | chr7.4:2503072-2503091 | MS.gene050521:intron | 25.0% |
| !!! | CTCTAATACCATGATTTTTT+GGG | + | chr7.4:2504558-2504577 | MS.gene050521:intron | 25.0% |
| !!! | GCTTCTGAATTTATTTTGAA+TGG | - | chr7.4:2504195-2504214 | None:intergenic | 25.0% |
| AACATTCAACTTGGACTATA+GGG | - | chr7.4:2504320-2504339 | None:intergenic | 30.0% | |
| AACTGTCTCAACAATTACAA+AGG | - | chr7.4:2504989-2505008 | None:intergenic | 30.0% | |
| ACAATAGTTCCTTGAAACAA+TGG | + | chr7.4:2505016-2505035 | MS.gene050521:intron | 30.0% | |
| ACTCAACAAAGATGATTTGA+AGG | + | chr7.4:2506068-2506087 | MS.gene050521:CDS | 30.0% | |
| ACTGTCATCAGAAACAAATT+GGG | - | chr7.4:2505412-2505431 | None:intergenic | 30.0% | |
| AGCATGTTTGATCAAAGATA+TGG | - | chr7.4:2501918-2501937 | None:intergenic | 30.0% | |
| AGGAATTGAAAGAAAGAACT+TGG | - | chr7.4:2505206-2505225 | None:intergenic | 30.0% | |
| AGTTCTGCATAAAAAGGAAA+TGG | - | chr7.4:2504830-2504849 | None:intergenic | 30.0% | |
| ATAATCTGAATGTTCAAGGA+AGG | + | chr7.4:2505874-2505893 | MS.gene050521:intron | 30.0% | |
| ATCAAAGAAAGTGATTCCTT+TGG | - | chr7.4:2501945-2501964 | None:intergenic | 30.0% | |
| ATCTCTTATCACAAAACCAA+TGG | + | chr7.4:2503376-2503395 | MS.gene050521:intron | 30.0% | |
| ATGTAAAAGCCATTGTTTCA+AGG | - | chr7.4:2505028-2505047 | None:intergenic | 30.0% | |
| ATTAATGCTATATGCTCCAT+TGG | - | chr7.4:2503395-2503414 | None:intergenic | 30.0% | |
| ATTCTTTCTCGAAATGACTT+CGG | + | chr7.4:2505254-2505273 | MS.gene050521:intron | 30.0% | |
| CTAATCTTTGTTAAAGGTTC+AGG | - | chr7.4:2502948-2502967 | None:intergenic | 30.0% | |
| GAGAGAAATAAATTGAGAGA+AGG | + | chr7.4:2504615-2504634 | MS.gene050521:intron | 30.0% | |
| TAAAAATTCTCAGGCACTAA+AGG | + | chr7.4:2502126-2502145 | MS.gene050521:intron | 30.0% | |
| TAACAAAGCCCAAAAAATCA+TGG | - | chr7.4:2504569-2504588 | None:intergenic | 30.0% | |
| TAAGTACATAGGATTATCTG+AGG | + | chr7.4:2502468-2502487 | MS.gene050521:CDS | 30.0% | |
| TAATCTGAATGTTCAAGGAA+GGG | + | chr7.4:2505875-2505894 | MS.gene050521:intron | 30.0% | |
| TACTACTATTCATATTCCTC+GGG | + | chr7.4:2501715-2501734 | MS.gene050521:CDS | 30.0% | |
| TGCCATAATTCACATCATTT+GGG | - | chr7.4:2503681-2503700 | None:intergenic | 30.0% | |
| TGTGCATTTACAAGTGAAAT+GGG | + | chr7.4:2503127-2503146 | MS.gene050521:intron | 30.0% | |
| TTTGTTGGACTTGGATATAA+TGG | - | chr7.4:2504765-2504784 | None:intergenic | 30.0% | |
| ! | AATGGCTTTTACATTGTTAG+TGG | + | chr7.4:2505034-2505053 | MS.gene050521:intron | 30.0% |
| ! | CTAACTCGTCTTTAAAAAAC+CGG | + | chr7.4:2502842-2502861 | MS.gene050521:intron | 30.0% |
| ! | CTTTAAAAAACCGGCTTATA+AGG | + | chr7.4:2502851-2502870 | MS.gene050521:intron | 30.0% |
| ! | TAAGTTTGGGATTGTCAAAA+TGG | + | chr7.4:2502180-2502199 | MS.gene050521:CDS | 30.0% |
| ! | TACTTTTGCAGTCATAATCA+TGG | - | chr7.4:2502654-2502673 | None:intergenic | 30.0% |
| ! | TATGACTGCAAAAGTATGTT+TGG | + | chr7.4:2502658-2502677 | MS.gene050521:intron | 30.0% |
| ! | TGCATTTATGGACTGATAAA+TGG | - | chr7.4:2504284-2504303 | None:intergenic | 30.0% |
| !! | GAAATTTGTTAGGAAGTGAT+AGG | + | chr7.4:2502368-2502387 | MS.gene050521:intron | 30.0% |
| !! | GTTTTGAATGAGTCAAAGAT+GGG | + | chr7.4:2502412-2502431 | MS.gene050521:intron | 30.0% |
| !! | TAGTACTGATACAATCAGAA+GGG | + | chr7.4:2502492-2502511 | MS.gene050521:CDS | 30.0% |
| !! | TGTTTTGAATGAGTCAAAGA+TGG | + | chr7.4:2502411-2502430 | MS.gene050521:intron | 30.0% |
| !!! | CAATGTTTTTTGTTACTTGC+AGG | + | chr7.4:2501823-2501842 | MS.gene050521:intron | 30.0% |
| !!! | GCCTTTTTCTAGAATTTCTA+TGG | - | chr7.4:2502972-2502991 | None:intergenic | 30.0% |
| AAACTCACTACCTTATAAGC+CGG | - | chr7.4:2502864-2502883 | None:intergenic | 35.0% | |
| AAAGATATGGCAACATCTTC+TGG | - | chr7.4:2501905-2501924 | None:intergenic | 35.0% | |
| AAATGCACACATTCTTAGAG+AGG | - | chr7.4:2503116-2503135 | None:intergenic | 35.0% | |
| AACAGATGAGGTTATGTGAT+AGG | + | chr7.4:2504377-2504396 | MS.gene050521:intron | 35.0% | |
| AAGAAACGTTTGTCCTTCAT+TGG | + | chr7.4:2501766-2501785 | MS.gene050521:intron | 35.0% | |
| AATGCACACATTCTTAGAGA+GGG | - | chr7.4:2503115-2503134 | None:intergenic | 35.0% | |
| AATTGGAATGCTTCAGTAGA+TGG | - | chr7.4:2504072-2504091 | None:intergenic | 35.0% | |
| ACATTCAACTTGGACTATAG+GGG | - | chr7.4:2504319-2504338 | None:intergenic | 35.0% | |
| AGAACCATCACAGTTTATCT+TGG | + | chr7.4:2503424-2503443 | MS.gene050521:intron | 35.0% | |
| AGCCCAAATGATGTGAATTA+TGG | + | chr7.4:2503676-2503695 | MS.gene050521:intron | 35.0% | |
| AGTCCAACAAATTCTAACAG+AGG | + | chr7.4:2504774-2504793 | MS.gene050521:intron | 35.0% | |
| ATAACCTCATCTGTTTGGAT+CGG | - | chr7.4:2504372-2504391 | None:intergenic | 35.0% | |
| ATAATGAACAAGGACCTGTT+TGG | - | chr7.4:2505610-2505629 | None:intergenic | 35.0% | |
| ATCAAACATGCTTTCTCCAA+AGG | + | chr7.4:2501926-2501945 | MS.gene050521:CDS | 35.0% | |
| ATCACATAACCTCATCTGTT+TGG | - | chr7.4:2504377-2504396 | None:intergenic | 35.0% | |
| ATGAAGATGAACTGATGAAG+TGG | - | chr7.4:2502019-2502038 | None:intergenic | 35.0% | |
| ATGCTCAAGCTAAGTTTCTA+GGG | - | chr7.4:2503358-2503377 | None:intergenic | 35.0% | |
| ATGCTGGTGAATAATGAACA+AGG | - | chr7.4:2505620-2505639 | None:intergenic | 35.0% | |
| ATTCAGATTGCCACTAAGTT+TGG | + | chr7.4:2502166-2502185 | MS.gene050521:CDS | 35.0% | |
| CAACATTCAACTTGGACTAT+AGG | - | chr7.4:2504321-2504340 | None:intergenic | 35.0% | |
| CTATGGAAATGGTTAAGTCA+TGG | - | chr7.4:2503797-2503816 | None:intergenic | 35.0% | |
| CTGCCATAATTCACATCATT+TGG | - | chr7.4:2503682-2503701 | None:intergenic | 35.0% | |
| GAAGTGTGAAAATCCAATGA+AGG | - | chr7.4:2501782-2501801 | None:intergenic | 35.0% | |
| GACTGTCATCAGAAACAAAT+TGG | - | chr7.4:2505413-2505432 | None:intergenic | 35.0% | |
| GAGGGAAAGATTAAGTACAT+AGG | + | chr7.4:2502457-2502476 | MS.gene050521:CDS | 35.0% | |
| GAGGTTATGTGATAGGATTT+AGG | + | chr7.4:2504384-2504403 | MS.gene050521:intron | 35.0% | |
| GATAATCTGCAAGTTAGACA+AGG | - | chr7.4:2502632-2502651 | None:intergenic | 35.0% | |
| GATGAAAATCTCAGAAAGAG+AGG | - | chr7.4:2503907-2503926 | None:intergenic | 35.0% | |
| GCAATCTGAATTTGATCTCT+TGG | - | chr7.4:2502157-2502176 | None:intergenic | 35.0% | |
| GTGTGCATTTACAAGTGAAA+TGG | + | chr7.4:2503126-2503145 | MS.gene050521:intron | 35.0% | |
| TACACTCTTGCTTTAGTCAA+GGG | - | chr7.4:2503563-2503582 | None:intergenic | 35.0% | |
| TCAAATGAACCAATCCAAAC+AGG | + | chr7.4:2505593-2505612 | MS.gene050521:intron | 35.0% | |
| TCACTACACAACTATGGAAA+TGG | - | chr7.4:2503808-2503827 | None:intergenic | 35.0% | |
| TGAATTCAGTTCTTGCATGA+TGG | - | chr7.4:2503294-2503313 | None:intergenic | 35.0% | |
| TGAGAGAAGGATCGATTATT+TGG | + | chr7.4:2504628-2504647 | MS.gene050521:intron | 35.0% | |
| TGATTCTTTAGTGGTTGTGA+AGG | - | chr7.4:2503222-2503241 | None:intergenic | 35.0% | |
| TTATGACTGTTTCAGTTGTG+AGG | + | chr7.4:2502797-2502816 | MS.gene050521:intron | 35.0% | |
| TTCACATCATTTGGGCTATT+TGG | - | chr7.4:2503673-2503692 | None:intergenic | 35.0% | |
| TTCAGACCTTATCCTCTAAA+AGG | + | chr7.4:2504443-2504462 | MS.gene050521:intron | 35.0% | |
| TTCAGATTGCCACTAAGTTT+GGG | + | chr7.4:2502167-2502186 | MS.gene050521:CDS | 35.0% | |
| TTGGTGTGTGAATAATTTGG+TGG | + | chr7.4:2504517-2504536 | MS.gene050521:intron | 35.0% | |
| TTTGACAATCCCAAACTTAG+TGG | - | chr7.4:2502179-2502198 | None:intergenic | 35.0% | |
| TTTGGGCTATTTGGATTGAA+AGG | - | chr7.4:2503664-2503683 | None:intergenic | 35.0% | |
| ! | AGATTGTTAGCTTAGTTAGG+AGG | - | chr7.4:2504707-2504726 | None:intergenic | 35.0% |
| ! | CTTAAGAAGTTGGTTGAAGA+GGG | + | chr7.4:2502439-2502458 | MS.gene050521:CDS | 35.0% |
| ! | GATTGAGACTGATTCTTTAG+TGG | - | chr7.4:2503231-2503250 | None:intergenic | 35.0% |
| ! | GTGCTTTTGTTCAATGTTCA+TGG | + | chr7.4:2506142-2506161 | MS.gene050521:CDS | 35.0% |
| ! | TCTGGTAACGTTGTAGTAAA+TGG | + | chr7.4:2502205-2502224 | MS.gene050521:CDS | 35.0% |
| ! | TGCACATACCAATGAAGTTT+TGG | + | chr7.4:2501982-2502001 | MS.gene050521:CDS | 35.0% |
| ! | TTCAGAATTGCTCAGCTTTT+TGG | - | chr7.4:2503521-2503540 | None:intergenic | 35.0% |
| ! | TTTATGGACTGATAAATGGC+TGG | - | chr7.4:2504280-2504299 | None:intergenic | 35.0% |
| !! | ACACCTTTTGTTTCATGTGA+TGG | + | chr7.4:2505078-2505097 | MS.gene050521:intron | 35.0% |
| !! | AGGTAGTCGTGTTTTTGATT+TGG | + | chr7.4:2502388-2502407 | MS.gene050521:intron | 35.0% |
| !! | CATACCAATGAAGTTTTGGT+CGG | + | chr7.4:2501986-2502005 | MS.gene050521:CDS | 35.0% |
| !! | CTAGTACTGATACAATCAGA+AGG | + | chr7.4:2502491-2502510 | MS.gene050521:CDS | 35.0% |
| !! | CTGTTAGAATTTGTTGGACT+TGG | - | chr7.4:2504774-2504793 | None:intergenic | 35.0% |
| !!! | CGGTTTTTTAAAGACGAGTT+AGG | - | chr7.4:2502844-2502863 | None:intergenic | 35.0% |
| !!! | TTTCTGAGATTTTCATCCGT+AGG | + | chr7.4:2503910-2503929 | MS.gene050521:intron | 35.0% |
| !!! | TTTTCGACTTGGTGCATATT+TGG | - | chr7.4:2502765-2502784 | None:intergenic | 35.0% |
| AAAGTGGAAAGTTACTCACC+AGG | - | chr7.4:2505811-2505830 | None:intergenic | 40.0% | |
| AACAAACATTAAGGGCTGAG+TGG | + | chr7.4:2504931-2504950 | MS.gene050521:intron | 40.0% | |
| AACTGCCTGAATCTCATCAT+GGG | - | chr7.4:2503749-2503768 | None:intergenic | 40.0% | |
| AAGAATCAGTCTCAATCCAG+AGG | + | chr7.4:2503234-2503253 | MS.gene050521:intron | 40.0% | |
| AAGCAAAGACTGCACAAAAG+TGG | + | chr7.4:2503012-2503031 | MS.gene050521:intron | 40.0% | |
| AAGCTTGGATATGGATGCAT+GGG | + | chr7.4:2501851-2501870 | MS.gene050521:CDS | 40.0% | |
| AAGGCTTTCAATCATGCTGT+TGG | - | chr7.4:2503203-2503222 | None:intergenic | 40.0% | |
| AAGTGGAAAGTTACTCACCA+GGG | - | chr7.4:2505810-2505829 | None:intergenic | 40.0% | |
| AATACTAGCACCTGCTAAGA+AGG | + | chr7.4:2504020-2504039 | MS.gene050521:intron | 40.0% | |
| AATCAGTTAGGTACCTGCAA+AGG | - | chr7.4:2502597-2502616 | None:intergenic | 40.0% | |
| AATCTCATCATGGGAGGAAT+AGG | - | chr7.4:2503740-2503759 | None:intergenic | 40.0% | |
| AATGCAACCAAGGTTACAAG+GGG | + | chr7.4:2505657-2505676 | MS.gene050521:CDS | 40.0% | |
| ACATTCAACACTATTGGGCT+TGG | + | chr7.4:2504498-2504517 | MS.gene050521:intron | 40.0% | |
| AGAGCCAGATTCTTACACAA+TGG | - | chr7.4:2504414-2504433 | None:intergenic | 40.0% | |
| AGATTCCAAAGCTCTGTGAT+GGG | + | chr7.4:2504249-2504268 | MS.gene050521:intron | 40.0% | |
| AGCAAAGACTGCACAAAAGT+GGG | + | chr7.4:2503013-2503032 | MS.gene050521:intron | 40.0% | |
| AGGTTATGCTTCTGCTTTAG+AGG | - | chr7.4:2503318-2503337 | None:intergenic | 40.0% | |
| AGTCTATCATGCAAATGCTC+AGG | + | chr7.4:2504225-2504244 | MS.gene050521:intron | 40.0% | |
| ATACGTTCGATCATGTTGTG+AGG | + | chr7.4:2502237-2502256 | MS.gene050521:CDS | 40.0% | |
| ATCAGTTAGGTACCTGCAAA+GGG | - | chr7.4:2502596-2502615 | None:intergenic | 40.0% | |
| ATCATGCTGTTGGTATTCCT+TGG | - | chr7.4:2503193-2503212 | None:intergenic | 40.0% | |
| ATGGCAGTACAGTGCATTTA+TGG | - | chr7.4:2504296-2504315 | None:intergenic | 40.0% | |
| ATTACTCACAGTGTCCTCAA+TGG | - | chr7.4:2502332-2502351 | None:intergenic | 40.0% | |
| CAACATGATCGAACGTATTC+AGG | - | chr7.4:2502235-2502254 | None:intergenic | 40.0% | |
| CAATGCAACCAAGGTTACAA+GGG | + | chr7.4:2505656-2505675 | MS.gene050521:CDS | 40.0% | |
| CAGGTTTCTAAGCTTGGATA+TGG | + | chr7.4:2501842-2501861 | MS.gene050521:intron | 40.0% | |
| CAGTAGTAAACTGAAGAGCA+TGG | - | chr7.4:2503627-2503646 | None:intergenic | 40.0% | |
| CCCTCACATTCAACACTATT+GGG | + | chr7.4:2504493-2504512 | MS.gene050521:intron | 40.0% | |
| CGACCTCTGTTAGAATTTGT+TGG | - | chr7.4:2504780-2504799 | None:intergenic | 40.0% | |
| CGTTTCTTACTTCTAAGCCT+TGG | - | chr7.4:2501754-2501773 | None:intergenic | 40.0% | |
| CTACACTCTTGCTTTAGTCA+AGG | - | chr7.4:2503564-2503583 | None:intergenic | 40.0% | |
| CTCAACAAGTTAGGCATCTA+CGG | + | chr7.4:2505836-2505855 | MS.gene050521:intron | 40.0% | |
| CTGACCATTGTGTAAGAATC+TGG | + | chr7.4:2504407-2504426 | MS.gene050521:intron | 40.0% | |
| CTTGCATGGATTCTTCATCA+AGG | + | chr7.4:2505766-2505785 | MS.gene050521:CDS | 40.0% | |
| CTTTCCGACCAAAACTTCAT+TGG | - | chr7.4:2501993-2502012 | None:intergenic | 40.0% | |
| CTTTGTGACCTCAACAAGTT+AGG | + | chr7.4:2505827-2505846 | MS.gene050521:intron | 40.0% | |
| GATCCACAATAAGCTTCCTA+CGG | - | chr7.4:2503929-2503948 | None:intergenic | 40.0% | |
| GATGCTCAAGCTAAGTTTCT+AGG | - | chr7.4:2503359-2503378 | None:intergenic | 40.0% | |
| GCACCATCACATGAAACAAA+AGG | - | chr7.4:2505084-2505103 | None:intergenic | 40.0% | |
| GCATTCCAATTCAGCTTATC+AGG | + | chr7.4:2504081-2504100 | MS.gene050521:intron | 40.0% | |
| GGGATTGTCAAAATGGAATC+TGG | + | chr7.4:2502187-2502206 | MS.gene050521:CDS | 40.0% | |
| GTCTATCATGCAAATGCTCA+GGG | + | chr7.4:2504226-2504245 | MS.gene050521:intron | 40.0% | |
| TAACTGCCTGAATCTCATCA+TGG | - | chr7.4:2503750-2503769 | None:intergenic | 40.0% | |
| TAAGCTTGGATATGGATGCA+TGG | + | chr7.4:2501850-2501869 | MS.gene050521:CDS | 40.0% | |
| TACGTTCGATCATGTTGTGA+GGG | + | chr7.4:2502238-2502257 | MS.gene050521:CDS | 40.0% | |
| TACTTGCAGGTTTCTAAGCT+TGG | + | chr7.4:2501836-2501855 | MS.gene050521:intron | 40.0% | |
| TCCAAAGAGACCATTCCATT+TGG | - | chr7.4:2502546-2502565 | None:intergenic | 40.0% | |
| TCCAAATGGAATGGTCTCTT+TGG | + | chr7.4:2502542-2502561 | MS.gene050521:CDS | 40.0% | |
| TCCATTTGGACAGCAGTAAT+GGG | - | chr7.4:2502532-2502551 | None:intergenic | 40.0% | |
| TCCCTCACATTCAACACTAT+TGG | + | chr7.4:2504492-2504511 | MS.gene050521:intron | 40.0% | |
| TCGAAATGACTTCGGTTGTT+TGG | + | chr7.4:2505262-2505281 | MS.gene050521:intron | 40.0% | |
| TCTCTATTCACAAACTCCTC+AGG | + | chr7.4:2504156-2504175 | MS.gene050521:intron | 40.0% | |
| TGAGCATTTGCATGATAGAC+TGG | - | chr7.4:2504226-2504245 | None:intergenic | 40.0% | |
| TGGACCAAGATAAACTGTGA+TGG | - | chr7.4:2503431-2503450 | None:intergenic | 40.0% | |
| TTACTCACAGTGTCCTCAAT+GGG | - | chr7.4:2502331-2502350 | None:intergenic | 40.0% | |
| TTACTGCTGTCCAAATGGAA+TGG | + | chr7.4:2502533-2502552 | MS.gene050521:CDS | 40.0% | |
| TTCCATAGTTGTGTAGTGAC+AGG | + | chr7.4:2503809-2503828 | MS.gene050521:intron | 40.0% | |
| TTCCATTTGGACAGCAGTAA+TGG | - | chr7.4:2502533-2502552 | None:intergenic | 40.0% | |
| TTGGATCGGAATGAAATCTC+TGG | - | chr7.4:2504358-2504377 | None:intergenic | 40.0% | |
| TTGTTCCTACAACACATGAC+AGG | - | chr7.4:2506002-2506021 | None:intergenic | 40.0% | |
| ! | AACTGTGATGGTTCTGCTAT+TGG | - | chr7.4:2503419-2503438 | None:intergenic | 40.0% |
| ! | AAGTTTTCCCCTTGTAACCT+TGG | - | chr7.4:2505667-2505686 | None:intergenic | 40.0% |
| ! | AGACCTTATCCTCTAAAAGG+CGG | + | chr7.4:2504446-2504465 | MS.gene050521:intron | 40.0% |
| ! | ATGAGACTGTTTAGGACTCT+AGG | - | chr7.4:2505549-2505568 | None:intergenic | 40.0% |
| ! | CCCAATAGTGTTGAATGTGA+GGG | - | chr7.4:2504496-2504515 | None:intergenic | 40.0% |
| ! | GCTTAAGAAGTTGGTTGAAG+AGG | + | chr7.4:2502438-2502457 | MS.gene050521:CDS | 40.0% |
| ! | GTTTGGTGACAACTCTTACA+GGG | + | chr7.4:2505279-2505298 | MS.gene050521:intron | 40.0% |
| ! | TCTGAAATCTGCCATAACAG+CGG | + | chr7.4:2503535-2503554 | MS.gene050521:intron | 40.0% |
| ! | TGCTCAAGCTAAGTTTCTAG+GGG | - | chr7.4:2503357-2503376 | None:intergenic | 40.0% |
| ! | TGTTTGGTGACAACTCTTAC+AGG | + | chr7.4:2505278-2505297 | MS.gene050521:intron | 40.0% |
| !! | AACTTGTTGAGGTCACAAAG+TGG | - | chr7.4:2505827-2505846 | None:intergenic | 40.0% |
| !! | ACAGTTTTCTGGTATGGACT+TGG | + | chr7.4:2505386-2505405 | MS.gene050521:intron | 40.0% |
| !! | AGAGTATTGCTGAAGTCAAG+TGG | - | chr7.4:2503472-2503491 | None:intergenic | 40.0% |
| !! | CAATGAAGTTTTGGTCGGAA+AGG | + | chr7.4:2501991-2502010 | MS.gene050521:CDS | 40.0% |
| !! | GGCTTGGTGTGTGAATAATT+TGG | + | chr7.4:2504514-2504533 | MS.gene050521:intron | 40.0% |
| !! | TCACTCTTCTAGCTTTCAGA+GGG | + | chr7.4:2503492-2503511 | MS.gene050521:intron | 40.0% |
| !! | TTCACTCTTCTAGCTTTCAG+AGG | + | chr7.4:2503491-2503510 | MS.gene050521:intron | 40.0% |
| !!! | GGGGTTTTTTCTCAGAACAT+AGG | - | chr7.4:2503338-2503357 | None:intergenic | 40.0% |
| AAAGACTGCACAAAAGTGGG+AGG | + | chr7.4:2503016-2503035 | MS.gene050521:intron | 45.0% | |
| AGATGCTGTGCCAATATCTG+AGG | + | chr7.4:2506098-2506117 | MS.gene050521:CDS | 45.0% | |
| AGGGTAGTCTTCAACGTCTT+GGG | + | chr7.4:2502257-2502276 | MS.gene050521:CDS | 45.0% | |
| ATGCTATGTTCTCCTCTCAG+TGG | - | chr7.4:2503051-2503070 | None:intergenic | 45.0% | |
| CAATTCAGCTTATCAGGACC+AGG | + | chr7.4:2504087-2504106 | MS.gene050521:intron | 45.0% | |
| CAGATATTGTTCCCCTTTGC+AGG | + | chr7.4:2502581-2502600 | MS.gene050521:CDS | 45.0% | |
| CATACCAGAAAACTGTCTGC+AGG | - | chr7.4:2505382-2505401 | None:intergenic | 45.0% | |
| CATCCGTAGGAAGCTTATTG+TGG | + | chr7.4:2503923-2503942 | MS.gene050521:intron | 45.0% | |
| CATTCCGATCCAAACAGATG+AGG | + | chr7.4:2504365-2504384 | MS.gene050521:intron | 45.0% | |
| CCTGGTGAAAAAAGAGATGC+TGG | - | chr7.4:2505636-2505655 | None:intergenic | 45.0% | |
| CCTTGCCTCCAAAAAATCCA+CGG | - | chr7.4:2505342-2505361 | None:intergenic | 45.0% | |
| CTGCAAAGGGGAACAATATC+TGG | - | chr7.4:2502583-2502602 | None:intergenic | 45.0% | |
| CTGGTCCTGATAAGCTGAAT+TGG | - | chr7.4:2504089-2504108 | None:intergenic | 45.0% | |
| CTTAGCAGGTGCTAGTATTC+AGG | - | chr7.4:2504019-2504038 | None:intergenic | 45.0% | |
| CTTGGAGAATGCAAGCTAGA+TGG | - | chr7.4:2503175-2503194 | None:intergenic | 45.0% | |
| GAAAGTTACTCACCAGGGAT+GGG | - | chr7.4:2505805-2505824 | None:intergenic | 45.0% | |
| GAACAAGGACCTGTTTGGAT+TGG | - | chr7.4:2505605-2505624 | None:intergenic | 45.0% | |
| GACAACTCTTACAGGGAACT+TGG | + | chr7.4:2505286-2505305 | MS.gene050521:intron | 45.0% | |
| GAGATTCCAAAGCTCTGTGA+TGG | + | chr7.4:2504248-2504267 | MS.gene050521:intron | 45.0% | |
| GATGGGAGAGCTTAAGAAGT+TGG | + | chr7.4:2502429-2502448 | MS.gene050521:intron | 45.0% | |
| GCAATGCAACCAAGGTTACA+AGG | + | chr7.4:2505655-2505674 | MS.gene050521:CDS | 45.0% | |
| GTCCTGTCACTACACAACTA+TGG | - | chr7.4:2503814-2503833 | None:intergenic | 45.0% | |
| TATGTTCTCCTCTCAGTGGT+GGG | - | chr7.4:2503047-2503066 | None:intergenic | 45.0% | |
| TCAACTTGGACTATAGGGGA+TGG | - | chr7.4:2504315-2504334 | None:intergenic | 45.0% | |
| TCAGTTAGGTACCTGCAAAG+GGG | - | chr7.4:2502595-2502614 | None:intergenic | 45.0% | |
| TCCAAAAAATCCACGGCCAA+GGG | - | chr7.4:2505335-2505354 | None:intergenic | 45.0% | |
| TCCCATTACTGCTGTCCAAA+TGG | + | chr7.4:2502528-2502547 | MS.gene050521:CDS | 45.0% | |
| TCTCCAGACAATGAAAGCTC+TGG | + | chr7.4:2503951-2503970 | MS.gene050521:intron | 45.0% | |
| TCTTACAGGGAACTTGGCAT+TGG | + | chr7.4:2505292-2505311 | MS.gene050521:intron | 45.0% | |
| TGAGATTCAGGCAGTTAGAG+AGG | + | chr7.4:2503753-2503772 | MS.gene050521:intron | 45.0% | |
| TGCAACCTGTCATGTGTTGT+AGG | + | chr7.4:2505994-2506013 | MS.gene050521:intron | 45.0% | |
| TTAGCCTACTCCTTCTTAGC+AGG | - | chr7.4:2504033-2504052 | None:intergenic | 45.0% | |
| TTATCAGGACCAGGATCAGA+GGG | + | chr7.4:2504096-2504115 | MS.gene050521:intron | 45.0% | |
| TTCCACAAGAGCTTATGCCA+AGG | + | chr7.4:2503991-2504010 | MS.gene050521:intron | 45.0% | |
| TTCCTCCCATGATGAGATTC+AGG | + | chr7.4:2503741-2503760 | MS.gene050521:intron | 45.0% | |
| TTCCTTGGCATAAGCTCTTG+TGG | - | chr7.4:2503996-2504015 | None:intergenic | 45.0% | |
| ! | AGTGAGCAAGCTTGTTCAAC+AGG | - | chr7.4:2503714-2503733 | None:intergenic | 45.0% |
| ! | CATCTAGCTTGCATTCTCCA+AGG | + | chr7.4:2503173-2503192 | MS.gene050521:intron | 45.0% |
| ! | CTTCACAACTTGCTCTTGCA+TGG | + | chr7.4:2505752-2505771 | MS.gene050521:CDS | 45.0% |
| ! | GACCTTATCCTCTAAAAGGC+GGG | + | chr7.4:2504447-2504466 | MS.gene050521:intron | 45.0% |
| ! | GCCCAATAGTGTTGAATGTG+AGG | - | chr7.4:2504497-2504516 | None:intergenic | 45.0% |
| ! | GTGCTAGTATTCAGGTTCCT+TGG | - | chr7.4:2504011-2504030 | None:intergenic | 45.0% |
| ! | TCCATTGTTGCTTCTGCAAC+AGG | - | chr7.4:2503871-2503890 | None:intergenic | 45.0% |
| ! | TGGGAACAGTGGTGTCAATA+CGG | - | chr7.4:2502312-2502331 | None:intergenic | 45.0% |
| ! | TGTACCTGCAGACAGTTTTC+TGG | + | chr7.4:2505375-2505394 | MS.gene050521:CDS | 45.0% |
| !! | CAGACAATGAAAGCTCTGGA+GGG | + | chr7.4:2503955-2503974 | MS.gene050521:intron | 45.0% |
| !! | CGTAGATGCCTAACTTGTTG+AGG | - | chr7.4:2505838-2505857 | None:intergenic | 45.0% |
| !! | CTGCAGACAGTTTTCTGGTA+TGG | + | chr7.4:2505380-2505399 | MS.gene050521:intron | 45.0% |
| !!! | CCAGCATCTCTTTTTTCACC+AGG | + | chr7.4:2505633-2505652 | MS.gene050521:intron | 45.0% |
| AAGTTGGCACAGGAGAAGCA+TGG | + | chr7.4:2505721-2505740 | MS.gene050521:CDS | 50.0% | |
| AGCACCTGCTAAGAAGGAGT+AGG | + | chr7.4:2504026-2504045 | MS.gene050521:intron | 50.0% | |
| AGTGTCCTCAATGGGAACAG+TGG | - | chr7.4:2502323-2502342 | None:intergenic | 50.0% | |
| ATAGTGCCTTACAGTCCCCT+TGG | + | chr7.4:2505316-2505335 | MS.gene050521:CDS | 50.0% | |
| CAGCGTTGTATACTCCAGTG+AGG | - | chr7.4:2501877-2501896 | None:intergenic | 50.0% | |
| CATATTCCTCGGGTGAAGCT+TGG | + | chr7.4:2501725-2501744 | MS.gene050521:CDS | 50.0% | |
| CCAAAAAATCCACGGCCAAG+GGG | - | chr7.4:2505334-2505353 | None:intergenic | 50.0% | |
| CCTCCAGAGCTTTCATTGTC+TGG | - | chr7.4:2503957-2503976 | None:intergenic | 50.0% | |
| CTATGTTCTCCTCTCAGTGG+TGG | - | chr7.4:2503048-2503067 | None:intergenic | 50.0% | |
| CTCCAAAAAATCCACGGCCA+AGG | - | chr7.4:2505336-2505355 | None:intergenic | 50.0% | |
| CTTATCAGGACCAGGATCAG+AGG | + | chr7.4:2504095-2504114 | MS.gene050521:intron | 50.0% | |
| GAGGGTAGTCTTCAACGTCT+TGG | + | chr7.4:2502256-2502275 | MS.gene050521:CDS | 50.0% | |
| GCCTGTTGCAGAAGCAACAA+TGG | + | chr7.4:2503867-2503886 | MS.gene050521:intron | 50.0% | |
| GGAAAGTTACTCACCAGGGA+TGG | - | chr7.4:2505806-2505825 | None:intergenic | 50.0% | |
| GGGTAGTCTTCAACGTCTTG+GGG | + | chr7.4:2502258-2502277 | MS.gene050521:CDS | 50.0% | |
| GTAACCTTGGTTGCATTGCC+TGG | - | chr7.4:2505654-2505673 | None:intergenic | 50.0% | |
| TCGGATGGAAAAGTTGGCAC+AGG | + | chr7.4:2505711-2505730 | MS.gene050521:CDS | 50.0% | |
| TGACACCACTGTTCCCATTG+AGG | + | chr7.4:2502315-2502334 | MS.gene050521:CDS | 50.0% | |
| TGCCTGAATCTCATCATGGG+AGG | - | chr7.4:2503746-2503765 | None:intergenic | 50.0% | |
| TGCTGTGCCAATATCTGAGG+TGG | + | chr7.4:2506101-2506120 | MS.gene050521:CDS | 50.0% | |
| TTCACCAGGCAATGCAACCA+AGG | + | chr7.4:2505647-2505666 | MS.gene050521:intron | 50.0% | |
| TTTATCTTGGTCCAGCCAGC+AGG | + | chr7.4:2503437-2503456 | MS.gene050521:intron | 50.0% | |
| ! | ATCGAAGTCCCGCCTTTTAG+AGG | - | chr7.4:2504458-2504477 | None:intergenic | 50.0% |
| ! | CCAGACAATGAAAGCTCTGG+AGG | + | chr7.4:2503954-2503973 | MS.gene050521:intron | 50.0% |
| ! | TGCCAATATCTGAGGTGGCA+GGG | + | chr7.4:2506106-2506125 | MS.gene050521:CDS | 50.0% |
| !! | ACAATGAAAGCTCTGGAGGG+TGG | + | chr7.4:2503958-2503977 | MS.gene050521:intron | 50.0% |
| !! | GTCCCGCCTTTTAGAGGATA+AGG | - | chr7.4:2504452-2504471 | None:intergenic | 50.0% |
| !!! | CAGGGCTGCTGCTTTTTCAA+TGG | + | chr7.4:2503268-2503287 | MS.gene050521:intron | 50.0% |
| !!! | CCGTGGATTTTTTGGAGGCA+AGG | + | chr7.4:2505339-2505358 | MS.gene050521:CDS | 50.0% |
| !!! | CTTGGCCGTGGATTTTTTGG+AGG | + | chr7.4:2505334-2505353 | MS.gene050521:CDS | 50.0% |
| AGCAGCCCATCACAGAGCTT+TGG | - | chr7.4:2504257-2504276 | None:intergenic | 55.0% | |
| CCAGAGGTTCGCAATGTGCA+GGG | + | chr7.4:2503250-2503269 | MS.gene050521:intron | 55.0% | |
| TATGGATGCATGGGCCTCAC+TGG | + | chr7.4:2501860-2501879 | MS.gene050521:CDS | 55.0% | |
| TCCAGAGGTTCGCAATGTGC+AGG | + | chr7.4:2503249-2503268 | MS.gene050521:intron | 55.0% | |
| TCCCCTGCCACCTCAGATAT+TGG | - | chr7.4:2506111-2506130 | None:intergenic | 55.0% | |
| ! | GCCAATATCTGAGGTGGCAG+GGG | + | chr7.4:2506107-2506126 | MS.gene050521:CDS | 55.0% |
| ! | GTGCCAATATCTGAGGTGGC+AGG | + | chr7.4:2506105-2506124 | MS.gene050521:CDS | 55.0% |
| ! | TATCTGAGGTGGCAGGGGAT+CGG | + | chr7.4:2506112-2506131 | MS.gene050521:CDS | 55.0% |
| !! | AGTCAAGGGCACCGCTGTTA+TGG | - | chr7.4:2503549-2503568 | None:intergenic | 55.0% |
| !!! | CCCCTTGGCCGTGGATTTTT+TGG | + | chr7.4:2505331-2505350 | MS.gene050521:CDS | 55.0% |
| AAGTGGATGCCTCCACCTGC+TGG | - | chr7.4:2503455-2503474 | None:intergenic | 60.0% | |
| AGGAAGCTCCCACCACTGAG+AGG | + | chr7.4:2503036-2503055 | MS.gene050521:intron | 60.0% | |
| AGGACCAGGATCAGAGGGCA+GGG | + | chr7.4:2504101-2504120 | MS.gene050521:intron | 60.0% | |
| ATCACCCTGCCCTCTGATCC+TGG | - | chr7.4:2504108-2504127 | None:intergenic | 60.0% | |
| ATCTTGGTCCAGCCAGCAGG+TGG | + | chr7.4:2503440-2503459 | MS.gene050521:intron | 60.0% | |
| CCCTGCACATTGCGAACCTC+TGG | - | chr7.4:2503253-2503272 | None:intergenic | 60.0% | |
| CGGGTGAAGCTTGGAAGCCA+AGG | + | chr7.4:2501734-2501753 | MS.gene050521:CDS | 60.0% | |
| GACGATGTAGTGCCCATCCC+TGG | + | chr7.4:2505790-2505809 | MS.gene050521:CDS | 60.0% | |
| TGGCTTCCAAGCTTCACCCG+AGG | - | chr7.4:2501734-2501753 | None:intergenic | 60.0% | |
| !! | TGGTGCTTGGTGTCTGCCTG+AGG | - | chr7.4:2504175-2504194 | None:intergenic | 60.0% |
| CAGGACCAGGATCAGAGGGC+AGG | + | chr7.4:2504100-2504119 | MS.gene050521:intron | 65.0% | |
| CCACGGCCAAGGGGACTGTA+AGG | - | chr7.4:2505325-2505344 | None:intergenic | 65.0% | |
| CCTTACAGTCCCCTTGGCCG+TGG | + | chr7.4:2505322-2505341 | MS.gene050521:CDS | 65.0% | |
| GTGGCAGGGGATCGGACAAC+TGG | + | chr7.4:2506120-2506139 | MS.gene050521:CDS | 65.0% | |
| TTGGTCCAGCCAGCAGGTGG+AGG | + | chr7.4:2503443-2503462 | MS.gene050521:intron | 65.0% | |
| GGATGCCTCCACCTGCTGGC+TGG | - | chr7.4:2503451-2503470 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 2501707 | 2506194 | 2501707 | ID=MS.gene050521 |
| chr7.4 | mRNA | 2501707 | 2506194 | 2501707 | ID=MS.gene050521.t1;Parent=MS.gene050521 |
| chr7.4 | exon | 2501707 | 2501763 | 2501707 | ID=MS.gene050521.t1.exon1;Parent=MS.gene050521.t1 |
| chr7.4 | CDS | 2501707 | 2501763 | 2501707 | ID=cds.MS.gene050521.t1;Parent=MS.gene050521.t1 |
| chr7.4 | exon | 2501845 | 2502012 | 2501845 | ID=MS.gene050521.t1.exon2;Parent=MS.gene050521.t1 |
| chr7.4 | CDS | 2501845 | 2502012 | 2501845 | ID=cds.MS.gene050521.t1;Parent=MS.gene050521.t1 |
| chr7.4 | exon | 2502139 | 2502342 | 2502139 | ID=MS.gene050521.t1.exon3;Parent=MS.gene050521.t1 |
| chr7.4 | CDS | 2502139 | 2502342 | 2502139 | ID=cds.MS.gene050521.t1;Parent=MS.gene050521.t1 |
| chr7.4 | exon | 2502430 | 2502602 | 2502430 | ID=MS.gene050521.t1.exon4;Parent=MS.gene050521.t1 |
| chr7.4 | CDS | 2502430 | 2502602 | 2502430 | ID=cds.MS.gene050521.t1;Parent=MS.gene050521.t1 |
| chr7.4 | exon | 2505300 | 2505396 | 2505300 | ID=MS.gene050521.t1.exon5;Parent=MS.gene050521.t1 |
| chr7.4 | CDS | 2505300 | 2505396 | 2505300 | ID=cds.MS.gene050521.t1;Parent=MS.gene050521.t1 |
| chr7.4 | exon | 2505655 | 2505811 | 2505655 | ID=MS.gene050521.t1.exon6;Parent=MS.gene050521.t1 |
| chr7.4 | CDS | 2505655 | 2505811 | 2505655 | ID=cds.MS.gene050521.t1;Parent=MS.gene050521.t1 |
| chr7.4 | exon | 2506016 | 2506194 | 2506016 | ID=MS.gene050521.t1.exon7;Parent=MS.gene050521.t1 |
| chr7.4 | CDS | 2506016 | 2506194 | 2506016 | ID=cds.MS.gene050521.t1;Parent=MS.gene050521.t1 |
| Gene Sequence |
| Protein sequence |
