Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89544.t1 | XP_013468422.1 | 95.3 | 616 | 28 | 1 | 1 | 616 | 1 | 615 | 0.00E+00 | 1187.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89544.t1 | Q7XJ98 | 72.2 | 622 | 155 | 7 | 1 | 614 | 5 | 616 | 2.4e-259 | 896.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89544.t1 | A0A072VKC5 | 95.3 | 616 | 28 | 1 | 1 | 616 | 1 | 615 | 0.0e+00 | 1187.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050811 | MS.gene89544 | 0.808381 | 3.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89544.t1 | MTR_1g069460 | 96.916 | 616 | 18 | 1 | 1 | 616 | 1 | 615 | 0.0 | 1242 |
| MS.gene89544.t1 | MTR_7g098650 | 75.490 | 612 | 73 | 5 | 3 | 613 | 1 | 536 | 0.0 | 938 |
| MS.gene89544.t1 | MTR_4g129930 | 56.250 | 400 | 170 | 3 | 153 | 548 | 69 | 467 | 7.92e-170 | 492 |
| MS.gene89544.t1 | MTR_3g084400 | 53.960 | 404 | 179 | 3 | 152 | 549 | 61 | 463 | 3.34e-167 | 486 |
| MS.gene89544.t1 | MTR_5g055350 | 53.349 | 418 | 179 | 5 | 141 | 547 | 35 | 447 | 1.79e-161 | 470 |
| MS.gene89544.t1 | MTR_5g095940 | 53.102 | 403 | 183 | 3 | 153 | 549 | 92 | 494 | 1.14e-153 | 452 |
| MS.gene89544.t1 | MTR_3g007840 | 50.370 | 405 | 168 | 5 | 153 | 549 | 20 | 399 | 8.61e-140 | 413 |
| MS.gene89544.t1 | MTR_5g095950 | 45.921 | 429 | 192 | 6 | 153 | 573 | 65 | 461 | 2.06e-130 | 392 |
| MS.gene89544.t1 | MTR_1g035730 | 45.026 | 382 | 201 | 3 | 160 | 539 | 77 | 451 | 1.70e-114 | 350 |
| MS.gene89544.t1 | MTR_5g010370 | 40.988 | 405 | 224 | 7 | 148 | 546 | 151 | 546 | 6.57e-110 | 341 |
| MS.gene89544.t1 | MTR_1g102430 | 42.821 | 397 | 215 | 7 | 152 | 541 | 97 | 488 | 1.51e-105 | 328 |
| MS.gene89544.t1 | MTR_5g010350 | 41.728 | 405 | 221 | 7 | 148 | 546 | 127 | 522 | 1.64e-104 | 326 |
| MS.gene89544.t1 | MTR_4g119810 | 36.342 | 421 | 240 | 9 | 143 | 542 | 31 | 444 | 8.83e-84 | 270 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89544.t1 | AT2G20370 | 72.756 | 624 | 148 | 8 | 1 | 614 | 5 | 616 | 0.0 | 918 |
| MS.gene89544.t1 | AT2G29040 | 56.444 | 450 | 183 | 6 | 145 | 588 | 288 | 730 | 0.0 | 541 |
| MS.gene89544.t1 | AT4G13990 | 53.030 | 396 | 182 | 3 | 155 | 547 | 95 | 489 | 1.26e-160 | 470 |
| MS.gene89544.t1 | AT4G13990 | 53.030 | 396 | 182 | 3 | 155 | 547 | 95 | 489 | 1.26e-160 | 470 |
| MS.gene89544.t1 | AT2G32750 | 50.243 | 412 | 197 | 4 | 142 | 547 | 72 | 481 | 6.97e-158 | 463 |
| MS.gene89544.t1 | AT2G32750 | 50.243 | 412 | 197 | 4 | 142 | 547 | 70 | 479 | 7.51e-158 | 463 |
| MS.gene89544.t1 | AT2G32740 | 46.602 | 412 | 209 | 6 | 144 | 546 | 55 | 464 | 6.58e-142 | 421 |
| MS.gene89544.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 153 | 548 | 70 | 474 | 2.73e-141 | 419 |
| MS.gene89544.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 153 | 548 | 78 | 482 | 3.02e-141 | 419 |
| MS.gene89544.t1 | AT2G31990 | 50.000 | 406 | 192 | 7 | 153 | 548 | 116 | 520 | 1.10e-140 | 419 |
| MS.gene89544.t1 | AT1G68470 | 45.812 | 382 | 193 | 6 | 160 | 538 | 73 | 443 | 5.46e-113 | 346 |
| MS.gene89544.t1 | AT5G62220 | 43.467 | 398 | 217 | 5 | 155 | 547 | 118 | 512 | 1.80e-110 | 342 |
| MS.gene89544.t1 | AT5G41250 | 40.452 | 398 | 221 | 7 | 150 | 543 | 172 | 557 | 5.10e-108 | 337 |
| MS.gene89544.t1 | AT1G63450 | 41.089 | 404 | 222 | 8 | 145 | 542 | 267 | 660 | 6.78e-108 | 339 |
| MS.gene89544.t1 | AT4G22580 | 36.160 | 401 | 237 | 8 | 155 | 542 | 37 | 431 | 8.49e-80 | 259 |
Find 150 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTGCACGTTATCTT+TGG | 0.193030 | 1.1:+51182668 | MS.gene89544:CDS |
| CCGTGGAATGCAAATGATTT+TGG | 0.193783 | 1.1:+51182913 | MS.gene89544:CDS |
| CAACCGCCTCCGAGGAAAAT+TGG | 0.202255 | 1.1:+51182205 | MS.gene89544:CDS |
| AGTGTAAAAGTTTGAGTCTT+TGG | 0.218524 | 1.1:+51182443 | MS.gene89544:CDS |
| CTCCCTGACCAAATGGAAAA+AGG | 0.223737 | 1.1:+51181950 | MS.gene89544:CDS |
| CTCATGATTCTCACTTGTTC+AGG | 0.224742 | 1.1:-51183408 | None:intergenic |
| TGATATTGCACGTTATCTTT+GGG | 0.257423 | 1.1:+51182669 | MS.gene89544:CDS |
| TCCTTCTTCTCCTCCTTCTC+AGG | 0.281758 | 1.1:-51182298 | None:intergenic |
| TTCTCCTCCTTCTCAGGGAC+AGG | 0.298751 | 1.1:-51182292 | None:intergenic |
| GAATACTTGGTATAATTCTT+AGG | 0.301851 | 1.1:-51183315 | None:intergenic |
| TTCTCCGGTTGGTAAGCTTT+TGG | 0.334154 | 1.1:+51183101 | MS.gene89544:CDS |
| AACAGAAACAGGTGTTGATT+TGG | 0.343201 | 1.1:-51182122 | None:intergenic |
| CTCTTTACCGCAACAGGGTC+AGG | 0.348005 | 1.1:-51182262 | None:intergenic |
| GCCTTTGATTCCATGTTGGC+TGG | 0.352901 | 1.1:+51183234 | MS.gene89544:CDS |
| TTTACTACCAATGCTGGTCT+TGG | 0.356831 | 1.1:+51182481 | MS.gene89544:CDS |
| GTGTCACTCTTTACCGCAAC+AGG | 0.361158 | 1.1:-51182268 | None:intergenic |
| CTGATTGATTTGGCATTGTC+AGG | 0.361929 | 1.1:-51183051 | None:intergenic |
| GTGTCATTCTTTATCACAAC+AGG | 0.366075 | 1.1:-51182238 | None:intergenic |
| TTGATGTTATATTTAGCAAT+AGG | 0.366737 | 1.1:+51182572 | MS.gene89544:CDS |
| ACAGTTCTGCTTGCAACCTC+AGG | 0.370804 | 1.1:+51183188 | MS.gene89544:CDS |
| CTGACAATGCCAAATCAATC+AGG | 0.371478 | 1.1:+51183052 | MS.gene89544:CDS |
| TTCTTTATCACAACAGGGTC+AGG | 0.396330 | 1.1:-51182232 | None:intergenic |
| TAACTGACCCCTGATTGATT+TGG | 0.399847 | 1.1:-51183061 | None:intergenic |
| CTTCGCTTGATCTGGTTGAC+TGG | 0.401762 | 1.1:+51182719 | MS.gene89544:CDS |
| GGATGCGGCTTCGCTTGATC+TGG | 0.401985 | 1.1:+51182711 | MS.gene89544:CDS |
| CCGCCGCTTGAGAATGTTGA+AGG | 0.412234 | 1.1:+51182505 | MS.gene89544:CDS |
| ATGTGCATGATCTTCCTTCA+AGG | 0.413105 | 1.1:+51182398 | MS.gene89544:CDS |
| TCATCAAAATGAACAGAAAC+AGG | 0.419490 | 1.1:-51182133 | None:intergenic |
| TAGTAGTATTATCAGCTCTA+AGG | 0.423263 | 1.1:-51182063 | None:intergenic |
| AACCGCCTCCGAGGAAAATT+GGG | 0.428718 | 1.1:+51182206 | MS.gene89544:CDS |
| ATGAGACGGCGCCCTGTGGC+GGG | 0.436273 | 1.1:+51181923 | MS.gene89544:CDS |
| CTCTTACGAATGTCATCCTC+TGG | 0.436463 | 1.1:-51183348 | None:intergenic |
| TTGACAAAGTTACACATTTG+AGG | 0.437236 | 1.1:+51183532 | MS.gene89544:CDS |
| CGGCATACACACAGTATACT+TGG | 0.437623 | 1.1:+51183286 | MS.gene89544:CDS |
| ATATCCTCATTAAACCTTGA+AGG | 0.437861 | 1.1:-51182412 | None:intergenic |
| TTTATGAAAGCGTTGAAAAC+CGG | 0.445498 | 1.1:+51182337 | MS.gene89544:CDS |
| AATGAGACGGCGCCCTGTGG+CGG | 0.447625 | 1.1:+51181922 | MS.gene89544:CDS |
| ACGAGGTTGGTCCTCATGAA+TGG | 0.447808 | 1.1:+51183637 | MS.gene89544:CDS |
| CCCTGAGAAGGAGGAGAAGA+AGG | 0.450012 | 1.1:+51182297 | MS.gene89544:CDS |
| AAACATCTGCATTATGCTGC+TGG | 0.450155 | 1.1:-51183157 | None:intergenic |
| TGTCTTCTTCCATCCAGGTT+CGG | 0.450428 | 1.1:+51183266 | MS.gene89544:CDS |
| GAGGTTTATCAATTACATCA+TGG | 0.456581 | 1.1:-51182168 | None:intergenic |
| TTACTACCAATGCTGGTCTT+GGG | 0.458270 | 1.1:+51182482 | MS.gene89544:CDS |
| TCTCCTCCTTCTCAGGGACA+GGG | 0.458535 | 1.1:-51182291 | None:intergenic |
| CCTTCTTCTCCTCCTTCTCA+GGG | 0.461076 | 1.1:-51182297 | None:intergenic |
| GGGCGTTCTCCCTGACCAAA+TGG | 0.465316 | 1.1:+51181943 | MS.gene89544:CDS |
| TCAGGGAGAACGCCCGCCAC+AGG | 0.465895 | 1.1:-51181935 | None:intergenic |
| AAAATAAGAGTGATCCTTGT+GGG | 0.471762 | 1.1:+51182362 | MS.gene89544:CDS |
| ATACCTGTCTTCTTCCATCC+AGG | 0.473157 | 1.1:+51183261 | MS.gene89544:CDS |
| AGGTTTATCAATTACATCAT+GGG | 0.478661 | 1.1:-51182167 | None:intergenic |
| GGGTGGAAGTATGTAGGATA+AGG | 0.483181 | 1.1:-51182940 | None:intergenic |
| TGAGGCGATTAGAGAGGAAG+TGG | 0.488880 | 1.1:+51183001 | MS.gene89544:CDS |
| GTCTGCCTTTGATTCCATGT+TGG | 0.489602 | 1.1:+51183230 | MS.gene89544:CDS |
| CGGCGGCCCAAGACCAGCAT+TGG | 0.493353 | 1.1:-51182488 | None:intergenic |
| CAGTTGGAAATATGCTTTGT+TGG | 0.497546 | 1.1:+51183602 | MS.gene89544:CDS |
| GAAATATGCTTTGTTGGATG+AGG | 0.505037 | 1.1:+51183608 | MS.gene89544:CDS |
| TGATTTGGCATTGTCAGGAC+GGG | 0.505393 | 1.1:-51183046 | None:intergenic |
| TACTGTGTGTATGCCGAACC+TGG | 0.505471 | 1.1:-51183279 | None:intergenic |
| CGAGGTTGGTCCTCATGAAT+GGG | 0.505576 | 1.1:+51183638 | MS.gene89544:CDS |
| TGGAATGAAGACAGAATACT+TGG | 0.505827 | 1.1:-51183328 | None:intergenic |
| TGTAAGTTTACTACCAATGC+TGG | 0.507525 | 1.1:+51182475 | MS.gene89544:CDS |
| GTTTAATGAGGATATGTTGA+AGG | 0.509728 | 1.1:+51182420 | MS.gene89544:CDS |
| AAGATGCTGATGTGTTCAAT+TGG | 0.511920 | 1.1:+51182968 | MS.gene89544:CDS |
| CCGGAGTGGAGTATAATGAA+TGG | 0.516300 | 1.1:+51182754 | MS.gene89544:CDS |
| TGTCTGAGGAAGAAACAGAC+TGG | 0.516652 | 1.1:+51182827 | MS.gene89544:CDS |
| TTTGCAGGGTGGAAGTATGT+AGG | 0.517211 | 1.1:-51182946 | None:intergenic |
| GTATGCGACAAATCAGTTTG+CGG | 0.518425 | 1.1:+51182549 | MS.gene89544:CDS |
| TCTTCCTTCAAGGTTTAATG+AGG | 0.519335 | 1.1:+51182408 | MS.gene89544:CDS |
| TGAGCAATGTAGAAGTTCTC+CGG | 0.519680 | 1.1:+51183086 | MS.gene89544:CDS |
| GGGTCAGCATATACTAGTCT+TGG | 0.523979 | 1.1:-51183453 | None:intergenic |
| TGCTGATGTGTTCAATTGGC+AGG | 0.526163 | 1.1:+51182972 | MS.gene89544:CDS |
| ATGAGTATCGAGGAAATACT+TGG | 0.526952 | 1.1:+51183375 | MS.gene89544:CDS |
| ACTTCATTGAGGAGAACAGT+TGG | 0.528023 | 1.1:+51183586 | MS.gene89544:CDS |
| CGGAGTGGAGTATAATGAAT+GGG | 0.528397 | 1.1:+51182755 | MS.gene89544:CDS |
| CAGAGGATGACATTCGTAAG+AGG | 0.529415 | 1.1:+51183349 | MS.gene89544:CDS |
| TAATATCTCGAGGAGGGATG+CGG | 0.531248 | 1.1:+51182696 | MS.gene89544:CDS |
| CGCCGCTTGAGAATGTTGAA+GGG | 0.533893 | 1.1:+51182506 | MS.gene89544:CDS |
| CATTCCAAAAGCTTACCAAC+CGG | 0.535445 | 1.1:-51183105 | None:intergenic |
| ATGGACATATTCTTTGCTGC+CGG | 0.540988 | 1.1:-51182871 | None:intergenic |
| ATATCAAACCCAGCATAAAA+CGG | 0.541005 | 1.1:-51182652 | None:intergenic |
| AAATATGCTTTGTTGGATGA+GGG | 0.541599 | 1.1:+51183609 | MS.gene89544:CDS |
| CAAAGTTACACATTTGAGGA+AGG | 0.543709 | 1.1:+51183536 | MS.gene89544:CDS |
| GTCTGAGGAAGAAACAGACT+GGG | 0.543879 | 1.1:+51182828 | MS.gene89544:CDS |
| CCAAAATCATTTGCATTCCA+CGG | 0.546391 | 1.1:-51182913 | None:intergenic |
| GCCAGCCAACATGGAATCAA+AGG | 0.555175 | 1.1:-51183235 | None:intergenic |
| CTCCTCCTTCTCAGGGACAG+GGG | 0.555383 | 1.1:-51182290 | None:intergenic |
| GATATTGCACGTTATCTTTG+GGG | 0.556924 | 1.1:+51182670 | MS.gene89544:CDS |
| CACCCCTGTCCCTGAGAAGG+AGG | 0.557721 | 1.1:+51182288 | MS.gene89544:CDS |
| TTGATTTGGCATTGTCAGGA+CGG | 0.559182 | 1.1:-51183047 | None:intergenic |
| TTGTTGCGGGGAGGATAACG+TGG | 0.563860 | 1.1:+51182791 | MS.gene89544:CDS |
| AGTGAGAATCATGAGAGAAG+AGG | 0.567837 | 1.1:+51183416 | MS.gene89544:CDS |
| CAGGGAGAACGCCCGCCACA+GGG | 0.568388 | 1.1:-51181934 | None:intergenic |
| TCTTTACCGCAACAGGGTCA+GGG | 0.571861 | 1.1:-51182261 | None:intergenic |
| CAGTTCTGCTTGCAACCTCA+GGG | 0.574443 | 1.1:+51183189 | MS.gene89544:CDS |
| ATGATTCTCACTTGTTCAGG+AGG | 0.576058 | 1.1:-51183405 | None:intergenic |
| AAAGAATATGTCCATGCTTG+TGG | 0.578138 | 1.1:+51182879 | MS.gene89544:CDS |
| GAGTTTCTAACTTGGAGCGA+GGG | 0.580423 | 1.1:-51183473 | None:intergenic |
| GAACCTGGATGGAAGAAGAC+AGG | 0.581328 | 1.1:-51183264 | None:intergenic |
| TGACACCCCTGTCCCTGAGA+AGG | 0.581426 | 1.1:+51182285 | MS.gene89544:CDS |
| GTCTCTAAGAGTTTCTAACT+TGG | 0.582080 | 1.1:-51183481 | None:intergenic |
| AACATCTGCATTATGCTGCT+GGG | 0.583163 | 1.1:-51183156 | None:intergenic |
| TCAATTGGCAGGACAGAATG+AGG | 0.584744 | 1.1:+51182983 | MS.gene89544:CDS |
| AGGTATACAGCCAGCCAACA+TGG | 0.585934 | 1.1:-51183244 | None:intergenic |
| TGACAATGCCAAATCAATCA+GGG | 0.586683 | 1.1:+51183053 | MS.gene89544:CDS |
| ATCATGAGAGAAGAGGTCAT+TGG | 0.590128 | 1.1:+51183423 | MS.gene89544:CDS |
| GTGGAGTATAATGAATGGGA+AGG | 0.593191 | 1.1:+51182759 | MS.gene89544:CDS |
| GGGTTATAATATCTCGAGGA+GGG | 0.593478 | 1.1:+51182690 | MS.gene89544:CDS |
| GGCTTATGAAGAGGCCGGAG+TGG | 0.594655 | 1.1:+51182740 | MS.gene89544:CDS |
| GCCGCTTGAGAATGTTGAAG+GGG | 0.594748 | 1.1:+51182507 | MS.gene89544:CDS |
| GTGTGTATGCCGAACCTGGA+TGG | 0.606530 | 1.1:-51183275 | None:intergenic |
| CCTTCAACATTCTCAAGCGG+CGG | 0.606943 | 1.1:-51182505 | None:intergenic |
| GGTTGCGATGATTTAACTCG+AGG | 0.608916 | 1.1:-51182187 | None:intergenic |
| ACTCGACTCTACCACAAGCA+TGG | 0.610855 | 1.1:-51182890 | None:intergenic |
| TGACTGGCTTATGAAGAGGC+CGG | 0.613272 | 1.1:+51182735 | MS.gene89544:CDS |
| CAATGTAGAAGTTCTCCGGT+TGG | 0.619092 | 1.1:+51183090 | MS.gene89544:CDS |
| CTTTACCGCAACAGGGTCAG+GGG | 0.619249 | 1.1:-51182260 | None:intergenic |
| GTGATCATCAACAAATTGAG+TGG | 0.619603 | 1.1:-51182095 | None:intergenic |
| GATTTGGCATTGTCAGGACG+GGG | 0.620412 | 1.1:-51183045 | None:intergenic |
| TGACACCCCTGACCCTGTTG+CGG | 0.622233 | 1.1:+51182255 | MS.gene89544:CDS |
| TGGTTGACTGGCTTATGAAG+AGG | 0.623329 | 1.1:+51182731 | MS.gene89544:CDS |
| GATGAGGGAAAACACGAGGT+TGG | 0.623860 | 1.1:+51183624 | MS.gene89544:CDS |
| CCATTCATTATACTCCACTC+CGG | 0.623909 | 1.1:-51182754 | None:intergenic |
| GTATTCTGTCTTCATTCCAG+AGG | 0.624692 | 1.1:+51183332 | MS.gene89544:CDS |
| AATCATCGCAACCGCCTCCG+AGG | 0.627422 | 1.1:+51182197 | MS.gene89544:CDS |
| ACCCCTTCAACATTCTCAAG+CGG | 0.628618 | 1.1:-51182508 | None:intergenic |
| ACAGAATGAGGCGATTAGAG+AGG | 0.639158 | 1.1:+51182995 | MS.gene89544:CDS |
| TTTGGGGTTATAATATCTCG+AGG | 0.641133 | 1.1:+51182686 | MS.gene89544:CDS |
| TTGATTGAATGCAAATGAGA+CGG | 0.643214 | 1.1:+51181909 | None:intergenic |
| TGTTGCGGGGAGGATAACGT+GGG | 0.647158 | 1.1:+51182792 | MS.gene89544:CDS |
| AAGAAAGGATCCCATTCATG+AGG | 0.647321 | 1.1:-51183648 | None:intergenic |
| AATAAGAGTGATCCTTGTGG+GGG | 0.649379 | 1.1:+51182364 | MS.gene89544:CDS |
| AGAGTTTCTAACTTGGAGCG+AGG | 0.650203 | 1.1:-51183474 | None:intergenic |
| GGGGTTATAATATCTCGAGG+AGG | 0.650227 | 1.1:+51182689 | MS.gene89544:CDS |
| GAAAATAAGAGTGATCCTTG+TGG | 0.653504 | 1.1:+51182361 | MS.gene89544:CDS |
| AAATAAGAGTGATCCTTGTG+GGG | 0.657313 | 1.1:+51182363 | MS.gene89544:CDS |
| GCAAATGAGACGGCGCCCTG+TGG | 0.665026 | 1.1:+51181919 | MS.gene89544:CDS |
| GACAATGCCAAATCAATCAG+GGG | 0.665818 | 1.1:+51183054 | MS.gene89544:CDS |
| TAAGAGGAACATGAGTATCG+AGG | 0.675462 | 1.1:+51183365 | MS.gene89544:CDS |
| AGGGTGATTCATACACTCGA+AGG | 0.675831 | 1.1:+51183208 | MS.gene89544:CDS |
| TGAGAAGGAGGAGAAGAAGG+AGG | 0.678894 | 1.1:+51182300 | MS.gene89544:CDS |
| AGCTTCAGCAGATGAATCAG+TGG | 0.683333 | 1.1:-51183703 | None:intergenic |
| GTTGGATGAGGGAAAACACG+AGG | 0.683608 | 1.1:+51183620 | MS.gene89544:CDS |
| TGTCACTCTTTACCGCAACA+GGG | 0.687983 | 1.1:-51182267 | None:intergenic |
| TTGTGGTAGAGTCGAGTCCG+TGG | 0.690146 | 1.1:+51182896 | MS.gene89544:CDS |
| TGTCATTCTTTATCACAACA+GGG | 0.695657 | 1.1:-51182237 | None:intergenic |
| CTGAGGAAGAAACAGACTGG+GGG | 0.706384 | 1.1:+51182830 | MS.gene89544:CDS |
| ATAAGAGTGATCCTTGTGGG+GGG | 0.715435 | 1.1:+51182365 | MS.gene89544:CDS |
| TCTGAGGAAGAAACAGACTG+GGG | 0.732806 | 1.1:+51182829 | MS.gene89544:CDS |
| GCAGTATGAGTGCTTGACTG+AGG | 0.734277 | 1.1:+51182600 | MS.gene89544:CDS |
| CGAGTGTATGAATCACCCTG+AGG | 0.742346 | 1.1:-51183204 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGATAAAAACTTCATTG+AGG | + | chr1.1:51183575-51183594 | MS.gene89544:CDS | 20.0% |
| !! | TTGATGTTATATTTAGCAAT+AGG | + | chr1.1:51182572-51182591 | MS.gene89544:CDS | 20.0% |
| ! | AGGTTTATCAATTACATCAT+GGG | - | chr1.1:51182170-51182189 | None:intergenic | 25.0% |
| ! | GAATACTTGGTATAATTCTT+AGG | - | chr1.1:51183318-51183337 | None:intergenic | 25.0% |
| ! | TTCTCAAAACCAAAAAATGA+TGG | + | chr1.1:51183669-51183688 | MS.gene89544:CDS | 25.0% |
| !!! | TTTTTTGGTTTTGAGAAGAA+AGG | - | chr1.1:51183666-51183685 | None:intergenic | 25.0% |
| AAAATAAGAGTGATCCTTGT+GGG | + | chr1.1:51182362-51182381 | MS.gene89544:CDS | 30.0% | |
| AAACCAAAAAATGATGGTAG+TGG | + | chr1.1:51183675-51183694 | MS.gene89544:CDS | 30.0% | |
| AGTGTAAAAGTTTGAGTCTT+TGG | + | chr1.1:51182443-51182462 | MS.gene89544:CDS | 30.0% | |
| ATATCAAACCCAGCATAAAA+CGG | - | chr1.1:51182655-51182674 | None:intergenic | 30.0% | |
| ATATCCTCATTAAACCTTGA+AGG | - | chr1.1:51182415-51182434 | None:intergenic | 30.0% | |
| GAGGTTTATCAATTACATCA+TGG | - | chr1.1:51182171-51182190 | None:intergenic | 30.0% | |
| GTTTAATGAGGATATGTTGA+AGG | + | chr1.1:51182420-51182439 | MS.gene89544:CDS | 30.0% | |
| TAGTAGTATTATCAGCTCTA+AGG | - | chr1.1:51182066-51182085 | None:intergenic | 30.0% | |
| TCATCAAAATGAACAGAAAC+AGG | - | chr1.1:51182136-51182155 | None:intergenic | 30.0% | |
| TGATATTGCACGTTATCTTT+GGG | + | chr1.1:51182669-51182688 | MS.gene89544:CDS | 30.0% | |
| TGTCATTCTTTATCACAACA+GGG | - | chr1.1:51182240-51182259 | None:intergenic | 30.0% | |
| TTGACAAAGTTACACATTTG+AGG | + | chr1.1:51183532-51183551 | MS.gene89544:CDS | 30.0% | |
| TTGATATTGCACGTTATCTT+TGG | + | chr1.1:51182668-51182687 | MS.gene89544:CDS | 30.0% | |
| ! | AAATATGCTTTGTTGGATGA+GGG | + | chr1.1:51183609-51183628 | MS.gene89544:CDS | 30.0% |
| ! | ATTTTTGTTCCGTTTTATGC+TGG | + | chr1.1:51182643-51182662 | MS.gene89544:CDS | 30.0% |
| ! | CTTCTTTATCAGCTTTTCTA+TGG | + | chr1.1:51182011-51182030 | MS.gene89544:CDS | 30.0% |
| ! | GTTTTCAACGCTTTCATAAA+AGG | - | chr1.1:51182337-51182356 | None:intergenic | 30.0% |
| ! | TTTTTGTTCCGTTTTATGCT+GGG | + | chr1.1:51182644-51182663 | MS.gene89544:CDS | 30.0% |
| !! | TTTATGAAAGCGTTGAAAAC+CGG | + | chr1.1:51182337-51182356 | MS.gene89544:CDS | 30.0% |
| !!! | GAATAAGCTTCTGTTTTTAC+CGG | + | chr1.1:51182852-51182871 | MS.gene89544:CDS | 30.0% |
| AAAGAATATGTCCATGCTTG+TGG | + | chr1.1:51182879-51182898 | MS.gene89544:CDS | 35.0% | |
| AAATAAGAGTGATCCTTGTG+GGG | + | chr1.1:51182363-51182382 | MS.gene89544:CDS | 35.0% | |
| AAGATGCTGATGTGTTCAAT+TGG | + | chr1.1:51182968-51182987 | MS.gene89544:CDS | 35.0% | |
| CAAAGTTACACATTTGAGGA+AGG | + | chr1.1:51183536-51183555 | MS.gene89544:CDS | 35.0% | |
| CAGTTGGAAATATGCTTTGT+TGG | + | chr1.1:51183602-51183621 | MS.gene89544:CDS | 35.0% | |
| CCAAAATCATTTGCATTCCA+CGG | - | chr1.1:51182916-51182935 | None:intergenic | 35.0% | |
| CTGAAGCTGCAAAAAATTCT+TGG | + | chr1.1:51183718-51183737 | MS.gene89544:CDS | 35.0% | |
| GAAAATAAGAGTGATCCTTG+TGG | + | chr1.1:51182361-51182380 | MS.gene89544:CDS | 35.0% | |
| GATATTGCACGTTATCTTTG+GGG | + | chr1.1:51182670-51182689 | MS.gene89544:CDS | 35.0% | |
| GTGATCATCAACAAATTGAG+TGG | - | chr1.1:51182098-51182117 | None:intergenic | 35.0% | |
| TCTTCCTTCAAGGTTTAATG+AGG | + | chr1.1:51182408-51182427 | MS.gene89544:CDS | 35.0% | |
| TGACAATGCCAAATCAATCA+GGG | + | chr1.1:51183053-51183072 | MS.gene89544:CDS | 35.0% | |
| TGGAATGAAGACAGAATACT+TGG | - | chr1.1:51183331-51183350 | None:intergenic | 35.0% | |
| TGTAAGTTTACTACCAATGC+TGG | + | chr1.1:51182475-51182494 | MS.gene89544:CDS | 35.0% | |
| ! | AAGGATCATTTTCTTGTTGC+GGG | + | chr1.1:51182778-51182797 | MS.gene89544:CDS | 35.0% |
| ! | GAAATATGCTTTGTTGGATG+AGG | + | chr1.1:51183608-51183627 | MS.gene89544:CDS | 35.0% |
| ! | GAAGGATCATTTTCTTGTTG+CGG | + | chr1.1:51182777-51182796 | MS.gene89544:CDS | 35.0% |
| ! | GTCTCTAAGAGTTTCTAACT+TGG | - | chr1.1:51183484-51183503 | None:intergenic | 35.0% |
| ! | GTGTCATTCTTTATCACAAC+AGG | - | chr1.1:51182241-51182260 | None:intergenic | 35.0% |
| ! | TTTGGGGTTATAATATCTCG+AGG | + | chr1.1:51182686-51182705 | MS.gene89544:CDS | 35.0% |
| !! | AACAGAAACAGGTGTTGATT+TGG | - | chr1.1:51182125-51182144 | None:intergenic | 35.0% |
| !! | ATGAGTATCGAGGAAATACT+TGG | + | chr1.1:51183375-51183394 | MS.gene89544:CDS | 35.0% |
| !!! | AAGCTTTTGGAATGTGACTT+TGG | + | chr1.1:51183114-51183133 | MS.gene89544:CDS | 35.0% |
| !!! | AGGATCACTCTTATTTTCAC+CGG | - | chr1.1:51182359-51182378 | None:intergenic | 35.0% |
| !!! | TCTCCACTACCATCATTTTT+TGG | - | chr1.1:51183681-51183700 | None:intergenic | 35.0% |
| AAACATCTGCATTATGCTGC+TGG | - | chr1.1:51183160-51183179 | None:intergenic | 40.0% | |
| AACATCTGCATTATGCTGCT+GGG | - | chr1.1:51183159-51183178 | None:intergenic | 40.0% | |
| AAGAAAGGATCCCATTCATG+AGG | - | chr1.1:51183651-51183670 | None:intergenic | 40.0% | |
| AATAAGAGTGATCCTTGTGG+GGG | + | chr1.1:51182364-51182383 | MS.gene89544:CDS | 40.0% | |
| ACTTCATTGAGGAGAACAGT+TGG | + | chr1.1:51183586-51183605 | MS.gene89544:CDS | 40.0% | |
| AGTGAGAATCATGAGAGAAG+AGG | + | chr1.1:51183416-51183435 | MS.gene89544:CDS | 40.0% | |
| ATCATGAGAGAAGAGGTCAT+TGG | + | chr1.1:51183423-51183442 | MS.gene89544:CDS | 40.0% | |
| ATGATTCTCACTTGTTCAGG+AGG | - | chr1.1:51183408-51183427 | None:intergenic | 40.0% | |
| ATGGACATATTCTTTGCTGC+CGG | - | chr1.1:51182874-51182893 | None:intergenic | 40.0% | |
| ATGTGCATGATCTTCCTTCA+AGG | + | chr1.1:51182398-51182417 | MS.gene89544:CDS | 40.0% | |
| CATTCCAAAAGCTTACCAAC+CGG | - | chr1.1:51183108-51183127 | None:intergenic | 40.0% | |
| CCATTCATTATACTCCACTC+CGG | - | chr1.1:51182757-51182776 | None:intergenic | 40.0% | |
| CGGAGTGGAGTATAATGAAT+GGG | + | chr1.1:51182755-51182774 | MS.gene89544:CDS | 40.0% | |
| CTCATGATTCTCACTTGTTC+AGG | - | chr1.1:51183411-51183430 | None:intergenic | 40.0% | |
| CTGACAATGCCAAATCAATC+AGG | + | chr1.1:51183052-51183071 | MS.gene89544:CDS | 40.0% | |
| GACAATGCCAAATCAATCAG+GGG | + | chr1.1:51183054-51183073 | MS.gene89544:CDS | 40.0% | |
| GGGTTATAATATCTCGAGGA+GGG | + | chr1.1:51182690-51182709 | MS.gene89544:CDS | 40.0% | |
| GTATGCGACAAATCAGTTTG+CGG | + | chr1.1:51182549-51182568 | MS.gene89544:CDS | 40.0% | |
| GTATTCTGTCTTCATTCCAG+AGG | + | chr1.1:51183332-51183351 | MS.gene89544:CDS | 40.0% | |
| GTGGAGTATAATGAATGGGA+AGG | + | chr1.1:51182759-51182778 | MS.gene89544:CDS | 40.0% | |
| TAACTGACCCCTGATTGATT+TGG | - | chr1.1:51183064-51183083 | None:intergenic | 40.0% | |
| TCCCTGACCAAATGGAAAAA+GGG | + | chr1.1:51181951-51181970 | MS.gene89544:CDS | 40.0% | |
| TGAGCAATGTAGAAGTTCTC+CGG | + | chr1.1:51183086-51183105 | MS.gene89544:CDS | 40.0% | |
| TTCTTTATCACAACAGGGTC+AGG | - | chr1.1:51182235-51182254 | None:intergenic | 40.0% | |
| ! | AACACATCAGCATCTTTTGC+AGG | - | chr1.1:51182964-51182983 | None:intergenic | 40.0% |
| ! | AAGTGGCTTTTCTCATTTGC+TGG | + | chr1.1:51183018-51183037 | MS.gene89544:CDS | 40.0% |
| ! | ACACATCAGCATCTTTTGCA+GGG | - | chr1.1:51182963-51182982 | None:intergenic | 40.0% |
| ! | AGGATCATTTTCTTGTTGCG+GGG | + | chr1.1:51182779-51182798 | MS.gene89544:CDS | 40.0% |
| ! | CCGTGGAATGCAAATGATTT+TGG | + | chr1.1:51182913-51182932 | MS.gene89544:CDS | 40.0% |
| ! | GAATGTTGAAGGGGTTTTCT+CGG | + | chr1.1:51182516-51182535 | MS.gene89544:CDS | 40.0% |
| ! | TAAGAGGAACATGAGTATCG+AGG | + | chr1.1:51183365-51183384 | MS.gene89544:CDS | 40.0% |
| ! | TCAGGAAACCCAATTTTCCT+CGG | - | chr1.1:51182217-51182236 | None:intergenic | 40.0% |
| ! | TTGATCCCCCTTTTTCCATT+TGG | - | chr1.1:51181961-51181980 | None:intergenic | 40.0% |
| ! | TTTACTACCAATGCTGGTCT+TGG | + | chr1.1:51182481-51182500 | MS.gene89544:CDS | 40.0% |
| !! | CTGATTGATTTGGCATTGTC+AGG | - | chr1.1:51183054-51183073 | None:intergenic | 40.0% |
| !! | TTACTACCAATGCTGGTCTT+GGG | + | chr1.1:51182482-51182501 | MS.gene89544:CDS | 40.0% |
| !! | TTGATTTGGCATTGTCAGGA+CGG | - | chr1.1:51183050-51183069 | None:intergenic | 40.0% |
| ACAGAATGAGGCGATTAGAG+AGG | + | chr1.1:51182995-51183014 | MS.gene89544:CDS | 45.0% | |
| ACCCCTTCAACATTCTCAAG+CGG | - | chr1.1:51182511-51182530 | None:intergenic | 45.0% | |
| AGAGTTTCTAACTTGGAGCG+AGG | - | chr1.1:51183477-51183496 | None:intergenic | 45.0% | |
| AGCTTCAGCAGATGAATCAG+TGG | - | chr1.1:51183706-51183725 | None:intergenic | 45.0% | |
| AGGGTGATTCATACACTCGA+AGG | + | chr1.1:51183208-51183227 | MS.gene89544:CDS | 45.0% | |
| ATAAGAGTGATCCTTGTGGG+GGG | + | chr1.1:51182365-51182384 | MS.gene89544:CDS | 45.0% | |
| ATACCTGTCTTCTTCCATCC+AGG | + | chr1.1:51183261-51183280 | MS.gene89544:CDS | 45.0% | |
| CAATGTAGAAGTTCTCCGGT+TGG | + | chr1.1:51183090-51183109 | MS.gene89544:CDS | 45.0% | |
| CAGAGGATGACATTCGTAAG+AGG | + | chr1.1:51183349-51183368 | MS.gene89544:CDS | 45.0% | |
| CCCTGACCAAATGGAAAAAG+GGG | + | chr1.1:51181952-51181971 | MS.gene89544:CDS | 45.0% | |
| CCGGAGTGGAGTATAATGAA+TGG | + | chr1.1:51182754-51182773 | MS.gene89544:CDS | 45.0% | |
| CCTGACCAAATGGAAAAAGG+GGG | + | chr1.1:51181953-51181972 | MS.gene89544:CDS | 45.0% | |
| CGGCATACACACAGTATACT+TGG | + | chr1.1:51183286-51183305 | MS.gene89544:CDS | 45.0% | |
| CTCCCTGACCAAATGGAAAA+AGG | + | chr1.1:51181950-51181969 | MS.gene89544:CDS | 45.0% | |
| CTCTTACGAATGTCATCCTC+TGG | - | chr1.1:51183351-51183370 | None:intergenic | 45.0% | |
| GAGTTTCTAACTTGGAGCGA+GGG | - | chr1.1:51183476-51183495 | None:intergenic | 45.0% | |
| GGGGTTATAATATCTCGAGG+AGG | + | chr1.1:51182689-51182708 | MS.gene89544:CDS | 45.0% | |
| GGTTGCGATGATTTAACTCG+AGG | - | chr1.1:51182190-51182209 | None:intergenic | 45.0% | |
| GTCTGAGGAAGAAACAGACT+GGG | + | chr1.1:51182828-51182847 | MS.gene89544:CDS | 45.0% | |
| GTCTGCCTTTGATTCCATGT+TGG | + | chr1.1:51183230-51183249 | MS.gene89544:CDS | 45.0% | |
| TAAATATACCTCCCCCCACA+AGG | - | chr1.1:51182379-51182398 | None:intergenic | 45.0% | |
| TAATATCTCGAGGAGGGATG+CGG | + | chr1.1:51182696-51182715 | MS.gene89544:CDS | 45.0% | |
| TCAATTGGCAGGACAGAATG+AGG | + | chr1.1:51182983-51183002 | MS.gene89544:CDS | 45.0% | |
| TCTGAGGAAGAAACAGACTG+GGG | + | chr1.1:51182829-51182848 | MS.gene89544:CDS | 45.0% | |
| TGCTGATGTGTTCAATTGGC+AGG | + | chr1.1:51182972-51182991 | MS.gene89544:CDS | 45.0% | |
| TGTCACTCTTTACCGCAACA+GGG | - | chr1.1:51182270-51182289 | None:intergenic | 45.0% | |
| TGTCTGAGGAAGAAACAGAC+TGG | + | chr1.1:51182827-51182846 | MS.gene89544:CDS | 45.0% | |
| TGTCTTCTTCCATCCAGGTT+CGG | + | chr1.1:51183266-51183285 | MS.gene89544:CDS | 45.0% | |
| ! | ATCATTTTCTTGTTGCGGGG+AGG | + | chr1.1:51182782-51182801 | MS.gene89544:CDS | 45.0% |
| ! | CCCCTTTTTCCATTTGGTCA+GGG | - | chr1.1:51181955-51181974 | None:intergenic | 45.0% |
| ! | GGAGGATAACGTGGGATTTT+CGG | + | chr1.1:51182800-51182819 | MS.gene89544:CDS | 45.0% |
| ! | GGATTTTCGGAGATTGTCTG+AGG | + | chr1.1:51182813-51182832 | MS.gene89544:CDS | 45.0% |
| ! | GGGTCAGCATATACTAGTCT+TGG | - | chr1.1:51183456-51183475 | None:intergenic | 45.0% |
| ! | GGGTGGAAGTATGTAGGATA+AGG | - | chr1.1:51182943-51182962 | None:intergenic | 45.0% |
| ! | TGAAGGGGTTTTCTCGGATA+CGG | + | chr1.1:51182522-51182541 | MS.gene89544:CDS | 45.0% |
| ! | TGATTTGGCATTGTCAGGAC+GGG | - | chr1.1:51183049-51183068 | None:intergenic | 45.0% |
| ! | TTTGCAGGGTGGAAGTATGT+AGG | - | chr1.1:51182949-51182968 | None:intergenic | 45.0% |
| !! | TGGTTGACTGGCTTATGAAG+AGG | + | chr1.1:51182731-51182750 | MS.gene89544:CDS | 45.0% |
| !!! | TTCTCCGGTTGGTAAGCTTT+TGG | + | chr1.1:51183101-51183120 | MS.gene89544:CDS | 45.0% |
| AACCGCCTCCGAGGAAAATT+GGG | + | chr1.1:51182206-51182225 | MS.gene89544:CDS | 50.0% | |
| ACAGTTCTGCTTGCAACCTC+AGG | + | chr1.1:51183188-51183207 | MS.gene89544:CDS | 50.0% | |
| ACTCGACTCTACCACAAGCA+TGG | - | chr1.1:51182893-51182912 | None:intergenic | 50.0% | |
| AGGTATACAGCCAGCCAACA+TGG | - | chr1.1:51183247-51183266 | None:intergenic | 50.0% | |
| CAGTTCTGCTTGCAACCTCA+GGG | + | chr1.1:51183189-51183208 | MS.gene89544:CDS | 50.0% | |
| CCTTCAACATTCTCAAGCGG+CGG | - | chr1.1:51182508-51182527 | None:intergenic | 50.0% | |
| CCTTCTTCTCCTCCTTCTCA+GGG | - | chr1.1:51182300-51182319 | None:intergenic | 50.0% | |
| CGAGTGTATGAATCACCCTG+AGG | - | chr1.1:51183207-51183226 | None:intergenic | 50.0% | |
| CGCCGCTTGAGAATGTTGAA+GGG | + | chr1.1:51182506-51182525 | MS.gene89544:CDS | 50.0% | |
| CTGAGGAAGAAACAGACTGG+GGG | + | chr1.1:51182830-51182849 | MS.gene89544:CDS | 50.0% | |
| CTTCGCTTGATCTGGTTGAC+TGG | + | chr1.1:51182719-51182738 | MS.gene89544:CDS | 50.0% | |
| GAACCTGGATGGAAGAAGAC+AGG | - | chr1.1:51183267-51183286 | None:intergenic | 50.0% | |
| GATGAGGGAAAACACGAGGT+TGG | + | chr1.1:51183624-51183643 | MS.gene89544:CDS | 50.0% | |
| GATTTGGCATTGTCAGGACG+GGG | - | chr1.1:51183048-51183067 | None:intergenic | 50.0% | |
| GCAGTATGAGTGCTTGACTG+AGG | + | chr1.1:51182600-51182619 | MS.gene89544:CDS | 50.0% | |
| GCCAGCCAACATGGAATCAA+AGG | - | chr1.1:51183238-51183257 | None:intergenic | 50.0% | |
| GCCGCTTGAGAATGTTGAAG+GGG | + | chr1.1:51182507-51182526 | MS.gene89544:CDS | 50.0% | |
| GCCTTTGATTCCATGTTGGC+TGG | + | chr1.1:51183234-51183253 | MS.gene89544:CDS | 50.0% | |
| GTTGGATGAGGGAAAACACG+AGG | + | chr1.1:51183620-51183639 | MS.gene89544:CDS | 50.0% | |
| TACTGTGTGTATGCCGAACC+TGG | - | chr1.1:51183282-51183301 | None:intergenic | 50.0% | |
| TCCTTCTTCTCCTCCTTCTC+AGG | - | chr1.1:51182301-51182320 | None:intergenic | 50.0% | |
| TCTTTACCGCAACAGGGTCA+GGG | - | chr1.1:51182264-51182283 | None:intergenic | 50.0% | |
| TGAGAAGGAGGAGAAGAAGG+AGG | + | chr1.1:51182300-51182319 | MS.gene89544:CDS | 50.0% | |
| TGAGGCGATTAGAGAGGAAG+TGG | + | chr1.1:51183001-51183020 | MS.gene89544:CDS | 50.0% | |
| ! | AACCCAATTTTCCTCGGAGG+CGG | - | chr1.1:51182211-51182230 | None:intergenic | 50.0% |
| ! | ACGAGGTTGGTCCTCATGAA+TGG | + | chr1.1:51183637-51183656 | MS.gene89544:CDS | 50.0% |
| ! | CATCAGCATCTTTTGCAGGG+TGG | - | chr1.1:51182960-51182979 | None:intergenic | 50.0% |
| ! | CCCCCTTTTTCCATTTGGTC+AGG | - | chr1.1:51181956-51181975 | None:intergenic | 50.0% |
| ! | CGAGGTTGGTCCTCATGAAT+GGG | + | chr1.1:51183638-51183657 | MS.gene89544:CDS | 50.0% |
| ! | GAAGGGGTTTTCTCGGATAC+GGG | + | chr1.1:51182523-51182542 | MS.gene89544:CDS | 50.0% |
| ! | GGAAACCCAATTTTCCTCGG+AGG | - | chr1.1:51182214-51182233 | None:intergenic | 50.0% |
| ! | GTGTCACTCTTTACCGCAAC+AGG | - | chr1.1:51182271-51182290 | None:intergenic | 50.0% |
| !! | TGACTGGCTTATGAAGAGGC+CGG | + | chr1.1:51182735-51182754 | MS.gene89544:CDS | 50.0% |
| CAACCGCCTCCGAGGAAAAT+TGG | + | chr1.1:51182205-51182224 | MS.gene89544:CDS | 55.0% | |
| CCCTGAGAAGGAGGAGAAGA+AGG | + | chr1.1:51182297-51182316 | MS.gene89544:CDS | 55.0% | |
| CCGCCGCTTGAGAATGTTGA+AGG | + | chr1.1:51182505-51182524 | MS.gene89544:CDS | 55.0% | |
| CTCTTTACCGCAACAGGGTC+AGG | - | chr1.1:51182265-51182284 | None:intergenic | 55.0% | |
| CTTTACCGCAACAGGGTCAG+GGG | - | chr1.1:51182263-51182282 | None:intergenic | 55.0% | |
| GTGTGTATGCCGAACCTGGA+TGG | - | chr1.1:51183278-51183297 | None:intergenic | 55.0% | |
| TCTCCTCCTTCTCAGGGACA+GGG | - | chr1.1:51182294-51182313 | None:intergenic | 55.0% | |
| TGTTGCGGGGAGGATAACGT+GGG | + | chr1.1:51182792-51182811 | MS.gene89544:CDS | 55.0% | |
| TTCTCCTCCTTCTCAGGGAC+AGG | - | chr1.1:51182295-51182314 | None:intergenic | 55.0% | |
| TTGTGGTAGAGTCGAGTCCG+TGG | + | chr1.1:51182896-51182915 | MS.gene89544:CDS | 55.0% | |
| TTGTTGCGGGGAGGATAACG+TGG | + | chr1.1:51182791-51182810 | MS.gene89544:CDS | 55.0% | |
| ! | GGGTTTTCTCGGATACGGGT+TGG | + | chr1.1:51182527-51182546 | MS.gene89544:CDS | 55.0% |
| AATCATCGCAACCGCCTCCG+AGG | + | chr1.1:51182197-51182216 | MS.gene89544:CDS | 60.0% | |
| AGAGTGATCCTTGTGGGGGG+AGG | + | chr1.1:51182368-51182387 | MS.gene89544:CDS | 60.0% | |
| CTCCTCCTTCTCAGGGACAG+GGG | - | chr1.1:51182293-51182312 | None:intergenic | 60.0% | |
| GGATGCGGCTTCGCTTGATC+TGG | + | chr1.1:51182711-51182730 | MS.gene89544:CDS | 60.0% | |
| GGCTTATGAAGAGGCCGGAG+TGG | + | chr1.1:51182740-51182759 | MS.gene89544:CDS | 60.0% | |
| GGGCGTTCTCCCTGACCAAA+TGG | + | chr1.1:51181943-51181962 | MS.gene89544:CDS | 60.0% | |
| TGACACCCCTGACCCTGTTG+CGG | + | chr1.1:51182255-51182274 | MS.gene89544:CDS | 60.0% | |
| TGACACCCCTGTCCCTGAGA+AGG | + | chr1.1:51182285-51182304 | MS.gene89544:CDS | 60.0% | |
| AATGAGACGGCGCCCTGTGG+CGG | + | chr1.1:51181922-51181941 | MS.gene89544:CDS | 65.0% | |
| CACCCCTGTCCCTGAGAAGG+AGG | + | chr1.1:51182288-51182307 | MS.gene89544:CDS | 65.0% | |
| GCAAATGAGACGGCGCCCTG+TGG | + | chr1.1:51181919-51181938 | MS.gene89544:CDS | 65.0% | |
| ATGAGACGGCGCCCTGTGGC+GGG | + | chr1.1:51181923-51181942 | MS.gene89544:CDS | 70.0% | |
| CAGGGAGAACGCCCGCCACA+GGG | - | chr1.1:51181937-51181956 | None:intergenic | 70.0% | |
| CGGCGGCCCAAGACCAGCAT+TGG | - | chr1.1:51182491-51182510 | None:intergenic | 70.0% | |
| TCAGGGAGAACGCCCGCCAC+AGG | - | chr1.1:51181938-51181957 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 51181917 | 51183767 | 51181917 | ID=MS.gene89544 |
| chr1.1 | mRNA | 51181917 | 51183767 | 51181917 | ID=MS.gene89544.t1;Parent=MS.gene89544 |
| chr1.1 | exon | 51181917 | 51183767 | 51181917 | ID=MS.gene89544.t1.exon1;Parent=MS.gene89544.t1 |
| chr1.1 | CDS | 51181917 | 51183767 | 51181917 | ID=cds.MS.gene89544.t1;Parent=MS.gene89544.t1 |
| Gene Sequence |
| Protein sequence |
