Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89699.t1 | RHN43422.1 | 98 | 564 | 11 | 0 | 1 | 564 | 284 | 847 | 7.00E-289 | 1002.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89699.t1 | Q7ZZ25 | 45.3 | 254 | 137 | 2 | 221 | 473 | 74 | 326 | 2.1e-60 | 235.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89699.t1 | A0A072TVF1 | 98.0 | 564 | 11 | 0 | 1 | 564 | 297 | 860 | 5.0e-289 | 1002.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene06026 | MS.gene89699 | 0.863973 | 1.70E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89699.t1 | MTR_8g099065 | 97.695 | 564 | 13 | 0 | 1 | 564 | 297 | 860 | 0.0 | 1137 |
MS.gene89699.t1 | MTR_5g009840 | 79.255 | 564 | 98 | 6 | 1 | 564 | 288 | 832 | 0.0 | 873 |
MS.gene89699.t1 | MTR_8g099065 | 97.044 | 406 | 12 | 0 | 1 | 406 | 297 | 702 | 0.0 | 815 |
MS.gene89699.t1 | MTR_6g033740 | 67.908 | 564 | 149 | 8 | 1 | 564 | 282 | 813 | 0.0 | 744 |
MS.gene89699.t1 | MTR_1g099480 | 57.876 | 565 | 192 | 8 | 2 | 564 | 265 | 785 | 0.0 | 615 |
MS.gene89699.t1 | MTR_3g089100 | 46.739 | 552 | 209 | 7 | 15 | 564 | 768 | 1236 | 4.60e-158 | 484 |
MS.gene89699.t1 | MTR_3g089100 | 46.739 | 552 | 209 | 7 | 15 | 564 | 739 | 1207 | 5.13e-158 | 483 |
MS.gene89699.t1 | MTR_3g089100 | 46.739 | 552 | 209 | 7 | 15 | 564 | 734 | 1202 | 5.17e-158 | 483 |
MS.gene89699.t1 | MTR_1g088730 | 45.766 | 555 | 213 | 6 | 14 | 564 | 767 | 1237 | 8.03e-156 | 478 |
MS.gene89699.t1 | MTR_1g099470 | 66.382 | 351 | 104 | 6 | 216 | 564 | 412 | 750 | 4.84e-155 | 462 |
MS.gene89699.t1 | MTR_1g099470 | 54.362 | 149 | 64 | 1 | 1 | 149 | 256 | 400 | 1.85e-43 | 166 |
MS.gene89699.t1 | MTR_1g099480 | 57.673 | 404 | 137 | 4 | 2 | 404 | 265 | 635 | 6.86e-152 | 450 |
MS.gene89699.t1 | MTR_1g101870 | 65.903 | 349 | 106 | 5 | 218 | 564 | 485 | 822 | 1.55e-150 | 452 |
MS.gene89699.t1 | MTR_1g101870 | 65.903 | 349 | 106 | 5 | 218 | 564 | 537 | 874 | 5.78e-150 | 453 |
MS.gene89699.t1 | MTR_1g088750 | 59.887 | 354 | 113 | 3 | 215 | 564 | 866 | 1194 | 8.89e-140 | 434 |
MS.gene89699.t1 | MTR_1g088750 | 32.812 | 128 | 86 | 0 | 14 | 141 | 724 | 851 | 2.17e-17 | 86.7 |
MS.gene89699.t1 | MTR_1g088750 | 59.887 | 354 | 113 | 3 | 215 | 564 | 915 | 1243 | 1.23e-139 | 435 |
MS.gene89699.t1 | MTR_1g088750 | 32.812 | 128 | 86 | 0 | 14 | 141 | 773 | 900 | 2.24e-17 | 86.7 |
MS.gene89699.t1 | MTR_4g074920 | 45.930 | 344 | 134 | 3 | 220 | 562 | 651 | 943 | 5.16e-96 | 313 |
MS.gene89699.t1 | MTR_3g092080 | 51.525 | 295 | 131 | 4 | 220 | 509 | 66 | 353 | 6.39e-93 | 289 |
MS.gene89699.t1 | MTR_3g092080 | 51.525 | 295 | 131 | 4 | 220 | 509 | 66 | 353 | 7.33e-93 | 290 |
MS.gene89699.t1 | MTR_3g092070 | 55.777 | 251 | 109 | 2 | 220 | 469 | 63 | 312 | 1.66e-92 | 287 |
MS.gene89699.t1 | MTR_3g092070 | 55.777 | 251 | 109 | 2 | 220 | 469 | 63 | 312 | 1.84e-92 | 289 |
MS.gene89699.t1 | MTR_6g023875 | 41.092 | 348 | 149 | 10 | 218 | 550 | 352 | 658 | 5.96e-71 | 240 |
MS.gene89699.t1 | MTR_6g023855 | 40.517 | 348 | 152 | 11 | 218 | 550 | 216 | 523 | 7.51e-70 | 234 |
MS.gene89699.t1 | MTR_4g011810 | 41.438 | 292 | 161 | 5 | 182 | 465 | 185 | 474 | 8.31e-65 | 221 |
MS.gene89699.t1 | MTR_7g075520 | 47.807 | 228 | 116 | 3 | 238 | 464 | 212 | 437 | 1.18e-63 | 216 |
MS.gene89699.t1 | MTR_4g096870 | 44.030 | 268 | 139 | 5 | 205 | 467 | 86 | 347 | 1.48e-62 | 211 |
MS.gene89699.t1 | MTR_6g023865 | 37.222 | 360 | 158 | 11 | 218 | 549 | 128 | 447 | 8.15e-59 | 203 |
MS.gene89699.t1 | MTR_2g086160 | 43.860 | 228 | 125 | 3 | 237 | 463 | 131 | 356 | 1.51e-58 | 201 |
MS.gene89699.t1 | MTR_4g053350 | 44.737 | 228 | 123 | 3 | 237 | 463 | 126 | 351 | 1.63e-58 | 201 |
MS.gene89699.t1 | MTR_2g086160 | 44.545 | 220 | 118 | 4 | 237 | 455 | 131 | 347 | 1.80e-58 | 199 |
MS.gene89699.t1 | MTR_4g053350 | 44.737 | 228 | 123 | 3 | 237 | 463 | 126 | 351 | 1.86e-58 | 201 |
MS.gene89699.t1 | MTR_7g101870 | 34.559 | 272 | 168 | 5 | 237 | 504 | 478 | 743 | 3.40e-48 | 179 |
MS.gene89699.t1 | MTR_7g101870 | 39.669 | 242 | 140 | 4 | 234 | 472 | 201 | 439 | 9.97e-48 | 178 |
MS.gene89699.t1 | MTR_1g063380 | 39.916 | 238 | 138 | 3 | 237 | 472 | 204 | 438 | 4.40e-48 | 179 |
MS.gene89699.t1 | MTR_1g063380 | 32.063 | 315 | 200 | 6 | 237 | 547 | 477 | 781 | 1.23e-47 | 178 |
MS.gene89699.t1 | MTR_2g095210 | 36.585 | 246 | 146 | 5 | 237 | 478 | 405 | 644 | 5.52e-47 | 176 |
MS.gene89699.t1 | MTR_2g095210 | 41.739 | 115 | 57 | 2 | 210 | 318 | 177 | 287 | 7.95e-15 | 78.2 |
MS.gene89699.t1 | MTR_6g023845 | 35.077 | 325 | 139 | 9 | 233 | 550 | 106 | 365 | 1.08e-46 | 168 |
MS.gene89699.t1 | MTR_7g089040 | 38.400 | 250 | 142 | 4 | 224 | 463 | 664 | 911 | 6.56e-45 | 171 |
MS.gene89699.t1 | MTR_7g089040 | 27.874 | 348 | 231 | 9 | 216 | 557 | 366 | 699 | 1.37e-30 | 127 |
MS.gene89699.t1 | MTR_7g088830 | 35.606 | 264 | 160 | 4 | 238 | 493 | 658 | 919 | 9.16e-45 | 170 |
MS.gene89699.t1 | MTR_7g088830 | 38.172 | 186 | 105 | 6 | 277 | 458 | 432 | 611 | 6.99e-29 | 122 |
MS.gene89699.t1 | MTR_2g095320 | 33.445 | 299 | 162 | 7 | 237 | 533 | 420 | 683 | 1.24e-44 | 169 |
MS.gene89699.t1 | MTR_2g095320 | 37.815 | 238 | 139 | 4 | 237 | 472 | 152 | 382 | 1.36e-42 | 162 |
MS.gene89699.t1 | MTR_3g117230 | 36.220 | 254 | 150 | 5 | 237 | 481 | 138 | 388 | 4.17e-44 | 162 |
MS.gene89699.t1 | MTR_3g104480 | 41.200 | 250 | 137 | 6 | 229 | 474 | 213 | 456 | 1.18e-43 | 166 |
MS.gene89699.t1 | MTR_3g112260 | 35.827 | 254 | 151 | 5 | 237 | 481 | 135 | 385 | 1.58e-43 | 160 |
MS.gene89699.t1 | MTR_7g010800 | 39.834 | 241 | 138 | 5 | 238 | 474 | 206 | 443 | 2.68e-43 | 164 |
MS.gene89699.t1 | MTR_3g104470 | 40.400 | 250 | 139 | 6 | 229 | 474 | 215 | 458 | 3.49e-43 | 164 |
MS.gene89699.t1 | MTR_3g115110 | 36.131 | 274 | 164 | 5 | 235 | 500 | 246 | 516 | 1.87e-41 | 159 |
MS.gene89699.t1 | MTR_4g094270 | 36.910 | 233 | 138 | 5 | 237 | 463 | 155 | 384 | 3.41e-41 | 154 |
MS.gene89699.t1 | MTR_7g088850 | 37.288 | 236 | 142 | 3 | 238 | 469 | 282 | 515 | 8.20e-41 | 155 |
MS.gene89699.t1 | MTR_7g088850 | 29.952 | 207 | 135 | 5 | 263 | 462 | 38 | 241 | 4.96e-16 | 81.6 |
MS.gene89699.t1 | MTR_1g069105 | 35.217 | 230 | 141 | 4 | 239 | 463 | 189 | 415 | 5.03e-40 | 151 |
MS.gene89699.t1 | MTR_7g099640 | 34.783 | 230 | 142 | 4 | 239 | 463 | 188 | 414 | 7.35e-40 | 151 |
MS.gene89699.t1 | MTR_7g099640 | 34.783 | 230 | 142 | 4 | 239 | 463 | 188 | 414 | 8.76e-40 | 150 |
MS.gene89699.t1 | MTR_3g062510 | 35.498 | 231 | 143 | 3 | 237 | 463 | 158 | 386 | 1.52e-39 | 149 |
MS.gene89699.t1 | MTR_1g095660 | 34.686 | 271 | 164 | 6 | 237 | 496 | 117 | 385 | 2.83e-39 | 148 |
MS.gene89699.t1 | MTR_1g083330 | 35.683 | 227 | 140 | 3 | 240 | 462 | 169 | 393 | 2.99e-39 | 149 |
MS.gene89699.t1 | MTR_4g033235 | 35.683 | 227 | 140 | 3 | 240 | 462 | 170 | 394 | 4.14e-39 | 148 |
MS.gene89699.t1 | MTR_3g462930 | 41.667 | 228 | 121 | 6 | 238 | 457 | 304 | 527 | 5.22e-39 | 152 |
MS.gene89699.t1 | MTR_7g089290 | 37.004 | 227 | 136 | 6 | 237 | 458 | 638 | 862 | 8.76e-39 | 152 |
MS.gene89699.t1 | MTR_4g094662 | 39.286 | 224 | 129 | 5 | 238 | 457 | 229 | 449 | 9.24e-39 | 151 |
MS.gene89699.t1 | MTR_7g089290 | 37.004 | 227 | 136 | 6 | 237 | 458 | 666 | 890 | 1.04e-38 | 152 |
MS.gene89699.t1 | MTR_2g438140 | 39.286 | 224 | 129 | 5 | 238 | 457 | 226 | 446 | 1.43e-38 | 150 |
MS.gene89699.t1 | MTR_5g069780 | 40.088 | 227 | 126 | 5 | 238 | 457 | 313 | 536 | 1.50e-38 | 151 |
MS.gene89699.t1 | MTR_5g075340 | 35.714 | 280 | 168 | 7 | 224 | 497 | 215 | 488 | 1.67e-38 | 151 |
MS.gene89699.t1 | MTR_2g438140 | 39.286 | 224 | 129 | 5 | 238 | 457 | 286 | 506 | 3.94e-38 | 149 |
MS.gene89699.t1 | MTR_7g078570 | 37.931 | 232 | 134 | 5 | 238 | 462 | 192 | 420 | 5.41e-38 | 149 |
MS.gene89699.t1 | MTR_2g007010 | 34.385 | 317 | 181 | 9 | 240 | 550 | 240 | 535 | 2.66e-37 | 147 |
MS.gene89699.t1 | MTR_2g007010 | 33.482 | 224 | 142 | 4 | 237 | 456 | 527 | 747 | 1.38e-35 | 142 |
MS.gene89699.t1 | MTR_4g067100 | 38.655 | 238 | 135 | 5 | 238 | 467 | 380 | 614 | 3.56e-37 | 148 |
MS.gene89699.t1 | MTR_4g067100 | 38.655 | 238 | 135 | 5 | 238 | 467 | 380 | 614 | 3.56e-37 | 148 |
MS.gene89699.t1 | MTR_4g064350 | 36.638 | 232 | 137 | 5 | 238 | 462 | 320 | 548 | 4.43e-37 | 147 |
MS.gene89699.t1 | MTR_0376s0020 | 36.364 | 231 | 138 | 5 | 238 | 462 | 1 | 228 | 6.55e-37 | 144 |
MS.gene89699.t1 | MTR_7g096060 | 36.638 | 232 | 137 | 5 | 238 | 462 | 240 | 468 | 1.42e-36 | 145 |
MS.gene89699.t1 | MTR_1g028390 | 38.934 | 244 | 137 | 7 | 224 | 463 | 316 | 551 | 2.64e-36 | 144 |
MS.gene89699.t1 | MTR_6g016600 | 39.301 | 229 | 131 | 5 | 238 | 462 | 317 | 541 | 3.28e-36 | 143 |
MS.gene89699.t1 | MTR_6g059690 | 35.776 | 232 | 139 | 5 | 238 | 462 | 197 | 425 | 8.94e-35 | 139 |
MS.gene89699.t1 | MTR_7g088980 | 35.146 | 239 | 149 | 3 | 238 | 472 | 136 | 372 | 2.21e-34 | 135 |
MS.gene89699.t1 | MTR_3g023900 | 32.083 | 240 | 140 | 6 | 237 | 456 | 530 | 766 | 3.03e-34 | 138 |
MS.gene89699.t1 | MTR_3g023900 | 31.034 | 319 | 192 | 7 | 240 | 548 | 236 | 536 | 2.97e-31 | 129 |
MS.gene89699.t1 | MTR_5g075360 | 38.494 | 239 | 137 | 6 | 229 | 463 | 7 | 239 | 4.54e-34 | 135 |
MS.gene89699.t1 | MTR_7g088980 | 35.146 | 239 | 149 | 3 | 238 | 472 | 218 | 454 | 7.74e-34 | 135 |
MS.gene89699.t1 | MTR_7g088980 | 31.013 | 158 | 99 | 5 | 306 | 456 | 17 | 171 | 2.15e-11 | 66.6 |
MS.gene89699.t1 | MTR_5g075360 | 38.494 | 239 | 137 | 6 | 229 | 463 | 183 | 415 | 1.23e-33 | 136 |
MS.gene89699.t1 | MTR_3g062510 | 41.176 | 187 | 102 | 4 | 237 | 419 | 158 | 340 | 1.36e-33 | 132 |
MS.gene89699.t1 | MTR_2g101290 | 31.313 | 297 | 177 | 9 | 236 | 521 | 413 | 693 | 1.57e-33 | 136 |
MS.gene89699.t1 | MTR_7g088980 | 35.146 | 239 | 149 | 3 | 238 | 472 | 286 | 522 | 1.58e-33 | 135 |
MS.gene89699.t1 | MTR_7g088980 | 34.513 | 226 | 128 | 8 | 243 | 456 | 22 | 239 | 3.06e-25 | 110 |
MS.gene89699.t1 | MTR_5g075360 | 38.494 | 239 | 137 | 6 | 229 | 463 | 57 | 289 | 2.31e-33 | 134 |
MS.gene89699.t1 | MTR_2g101290 | 31.313 | 297 | 177 | 9 | 236 | 521 | 413 | 693 | 2.39e-33 | 136 |
MS.gene89699.t1 | MTR_5g075360 | 38.494 | 239 | 137 | 6 | 229 | 463 | 233 | 465 | 3.51e-33 | 135 |
MS.gene89699.t1 | MTR_7g088980 | 35.146 | 239 | 149 | 3 | 238 | 472 | 312 | 548 | 3.98e-33 | 134 |
MS.gene89699.t1 | MTR_7g088980 | 35.638 | 188 | 111 | 5 | 276 | 456 | 81 | 265 | 8.83e-24 | 105 |
MS.gene89699.t1 | MTR_1g069105 | 36.702 | 188 | 111 | 4 | 239 | 421 | 189 | 373 | 2.31e-32 | 129 |
MS.gene89699.t1 | MTR_3g023890 | 34.016 | 244 | 132 | 7 | 237 | 456 | 384 | 622 | 1.50e-31 | 130 |
MS.gene89699.t1 | MTR_3g023890 | 31.667 | 300 | 168 | 8 | 261 | 548 | 116 | 390 | 3.84e-29 | 122 |
MS.gene89699.t1 | MTR_2g078630 | 32.271 | 251 | 154 | 7 | 240 | 479 | 68 | 313 | 1.11e-30 | 128 |
MS.gene89699.t1 | MTR_2g024440 | 32.530 | 249 | 145 | 8 | 237 | 472 | 213 | 451 | 1.41e-30 | 125 |
MS.gene89699.t1 | MTR_2g078630 | 32.271 | 251 | 154 | 7 | 240 | 479 | 596 | 841 | 2.58e-30 | 127 |
MS.gene89699.t1 | MTR_2g024440 | 32.258 | 248 | 147 | 7 | 237 | 472 | 295 | 533 | 3.01e-30 | 125 |
MS.gene89699.t1 | MTR_2g024440 | 32.258 | 248 | 147 | 7 | 237 | 472 | 296 | 534 | 3.26e-30 | 125 |
MS.gene89699.t1 | MTR_8g056860 | 32.576 | 264 | 140 | 8 | 243 | 476 | 462 | 717 | 5.21e-30 | 125 |
MS.gene89699.t1 | MTR_8g023550 | 32.174 | 230 | 135 | 4 | 237 | 462 | 164 | 376 | 5.94e-30 | 122 |
MS.gene89699.t1 | MTR_3g096000 | 32.313 | 294 | 180 | 8 | 209 | 485 | 262 | 553 | 6.23e-30 | 125 |
MS.gene89699.t1 | MTR_8g099605 | 34.034 | 238 | 142 | 4 | 238 | 463 | 404 | 638 | 9.31e-30 | 125 |
MS.gene89699.t1 | MTR_8g099605 | 34.034 | 238 | 142 | 4 | 238 | 463 | 163 | 397 | 1.52e-29 | 124 |
MS.gene89699.t1 | MTR_8g469460 | 33.704 | 270 | 141 | 8 | 232 | 497 | 201 | 436 | 1.53e-29 | 124 |
MS.gene89699.t1 | MTR_3g104490 | 35.510 | 245 | 130 | 7 | 232 | 474 | 201 | 419 | 3.37e-29 | 122 |
MS.gene89699.t1 | MTR_5g074850 | 33.083 | 266 | 154 | 9 | 224 | 474 | 484 | 740 | 2.06e-27 | 117 |
MS.gene89699.t1 | MTR_7g088980 | 34.513 | 226 | 128 | 8 | 243 | 456 | 22 | 239 | 1.44e-25 | 110 |
MS.gene89699.t1 | MTR_7g088980 | 32.068 | 237 | 116 | 6 | 238 | 472 | 286 | 479 | 8.31e-21 | 96.3 |
MS.gene89699.t1 | MTR_7g088980 | 35.638 | 188 | 111 | 5 | 276 | 456 | 81 | 265 | 5.34e-24 | 106 |
MS.gene89699.t1 | MTR_7g088980 | 32.068 | 237 | 116 | 6 | 238 | 472 | 312 | 505 | 1.80e-20 | 95.5 |
MS.gene89699.t1 | MTR_1g101880 | 43.571 | 140 | 39 | 3 | 379 | 518 | 154 | 253 | 1.07e-22 | 98.2 |
MS.gene89699.t1 | MTR_4g088885 | 33.036 | 224 | 121 | 9 | 272 | 475 | 257 | 471 | 7.87e-20 | 94.0 |
MS.gene89699.t1 | MTR_1g044600 | 34.839 | 155 | 92 | 4 | 315 | 462 | 204 | 356 | 9.45e-20 | 93.2 |
MS.gene89699.t1 | MTR_1g080430 | 33.333 | 240 | 130 | 12 | 217 | 441 | 661 | 885 | 2.52e-18 | 89.7 |
MS.gene89699.t1 | MTR_1g080430 | 33.333 | 240 | 130 | 12 | 217 | 441 | 661 | 885 | 3.00e-18 | 89.4 |
MS.gene89699.t1 | MTR_3g083210 | 46.739 | 92 | 33 | 3 | 254 | 344 | 8 | 84 | 1.06e-16 | 75.5 |
MS.gene89699.t1 | MTR_4g077880 | 32.680 | 153 | 97 | 3 | 274 | 425 | 368 | 515 | 2.36e-16 | 82.8 |
MS.gene89699.t1 | MTR_6g005760 | 28.502 | 207 | 118 | 5 | 274 | 455 | 362 | 563 | 4.19e-16 | 82.0 |
MS.gene89699.t1 | MTR_6g005760 | 28.502 | 207 | 118 | 5 | 274 | 455 | 234 | 435 | 4.20e-16 | 81.6 |
MS.gene89699.t1 | MTR_4g083460 | 24.590 | 244 | 127 | 6 | 240 | 465 | 839 | 1043 | 1.40e-14 | 77.8 |
MS.gene89699.t1 | MTR_5g020530 | 34.028 | 144 | 87 | 4 | 274 | 415 | 387 | 524 | 1.80e-14 | 77.0 |
MS.gene89699.t1 | MTR_4g112600 | 44.872 | 78 | 42 | 1 | 242 | 318 | 4 | 81 | 3.99e-14 | 68.2 |
MS.gene89699.t1 | MTR_3g076930 | 27.778 | 216 | 128 | 6 | 230 | 423 | 150 | 359 | 5.59e-13 | 71.6 |
MS.gene89699.t1 | MTR_7g026640 | 80.000 | 35 | 7 | 0 | 68 | 102 | 6 | 40 | 1.36e-11 | 60.5 |
MS.gene89699.t1 | MTR_1g101900 | 58.537 | 41 | 17 | 0 | 518 | 558 | 1 | 41 | 1.39e-11 | 62.4 |
MS.gene89699.t1 | MTR_8g469440 | 50.000 | 78 | 34 | 3 | 229 | 304 | 198 | 272 | 3.84e-11 | 64.7 |
MS.gene89699.t1 | MTR_3g115110 | 45.946 | 74 | 39 | 1 | 235 | 308 | 246 | 318 | 7.30e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89699.t1 | AT1G64110 | 73.097 | 565 | 122 | 5 | 1 | 564 | 294 | 829 | 0.0 | 828 |
MS.gene89699.t1 | AT1G64110 | 73.097 | 565 | 122 | 5 | 1 | 564 | 294 | 829 | 0.0 | 828 |
MS.gene89699.t1 | AT1G64110 | 73.097 | 565 | 122 | 5 | 1 | 564 | 289 | 824 | 0.0 | 828 |
MS.gene89699.t1 | AT1G64110 | 73.097 | 565 | 122 | 5 | 1 | 564 | 292 | 827 | 0.0 | 828 |
MS.gene89699.t1 | AT1G64110 | 73.097 | 565 | 122 | 5 | 1 | 564 | 292 | 827 | 0.0 | 828 |
MS.gene89699.t1 | AT4G28000 | 70.745 | 564 | 143 | 8 | 1 | 564 | 289 | 830 | 0.0 | 795 |
MS.gene89699.t1 | AT4G28000 | 70.265 | 565 | 146 | 8 | 1 | 564 | 289 | 832 | 0.0 | 792 |
MS.gene89699.t1 | AT5G52882 | 71.099 | 564 | 139 | 7 | 1 | 564 | 290 | 829 | 0.0 | 783 |
MS.gene89699.t1 | AT4G28000 | 69.187 | 529 | 141 | 8 | 1 | 528 | 289 | 796 | 0.0 | 724 |
MS.gene89699.t1 | AT4G02480 | 46.283 | 538 | 207 | 7 | 28 | 564 | 809 | 1265 | 3.03e-149 | 461 |
MS.gene89699.t1 | AT1G02890 | 58.523 | 352 | 121 | 3 | 215 | 564 | 918 | 1246 | 8.38e-137 | 428 |
MS.gene89699.t1 | AT1G02890 | 33.333 | 141 | 94 | 0 | 12 | 152 | 774 | 914 | 9.31e-21 | 97.4 |
MS.gene89699.t1 | AT4G24860 | 57.345 | 354 | 128 | 3 | 211 | 563 | 763 | 1094 | 2.11e-125 | 394 |
MS.gene89699.t1 | AT4G24860 | 30.657 | 137 | 88 | 3 | 20 | 152 | 632 | 765 | 5.38e-11 | 66.2 |
MS.gene89699.t1 | AT4G24860 | 57.345 | 354 | 128 | 3 | 211 | 563 | 786 | 1117 | 2.95e-125 | 395 |
MS.gene89699.t1 | AT4G24860 | 30.657 | 137 | 88 | 3 | 20 | 152 | 655 | 788 | 5.90e-11 | 66.2 |
MS.gene89699.t1 | AT4G24860 | 57.345 | 354 | 128 | 3 | 211 | 563 | 788 | 1119 | 3.66e-125 | 394 |
MS.gene89699.t1 | AT4G24860 | 30.657 | 137 | 88 | 3 | 20 | 152 | 657 | 790 | 7.64e-11 | 65.9 |
MS.gene89699.t1 | AT4G24860 | 57.345 | 354 | 128 | 3 | 211 | 563 | 790 | 1121 | 3.92e-125 | 394 |
MS.gene89699.t1 | AT4G24860 | 30.657 | 137 | 88 | 3 | 20 | 152 | 659 | 792 | 7.26e-11 | 65.9 |
MS.gene89699.t1 | AT1G50140 | 39.548 | 531 | 227 | 7 | 33 | 562 | 544 | 981 | 6.04e-118 | 372 |
MS.gene89699.t1 | AT1G50140 | 39.548 | 531 | 227 | 7 | 33 | 562 | 544 | 981 | 6.04e-118 | 372 |
MS.gene89699.t1 | AT1G50140 | 39.548 | 531 | 227 | 7 | 33 | 562 | 566 | 1003 | 1.20e-117 | 372 |
MS.gene89699.t1 | AT1G50140 | 39.548 | 531 | 227 | 7 | 33 | 562 | 566 | 1003 | 1.20e-117 | 372 |
MS.gene89699.t1 | AT1G50140 | 39.548 | 531 | 227 | 7 | 33 | 562 | 566 | 1003 | 1.20e-117 | 372 |
MS.gene89699.t1 | AT1G02890 | 53.125 | 352 | 112 | 4 | 215 | 564 | 918 | 1218 | 1.84e-114 | 368 |
MS.gene89699.t1 | AT1G02890 | 33.333 | 141 | 94 | 0 | 12 | 152 | 774 | 914 | 8.99e-21 | 97.4 |
MS.gene89699.t1 | AT3G19740 | 47.927 | 386 | 167 | 3 | 178 | 562 | 641 | 993 | 2.25e-112 | 358 |
MS.gene89699.t1 | AT1G62130 | 49.003 | 351 | 141 | 6 | 215 | 564 | 723 | 1036 | 7.04e-100 | 325 |
MS.gene89699.t1 | AT1G62130 | 49.003 | 351 | 141 | 6 | 215 | 564 | 730 | 1043 | 7.62e-100 | 325 |
MS.gene89699.t1 | AT4G27680 | 54.582 | 251 | 112 | 2 | 220 | 469 | 63 | 312 | 1.19e-89 | 282 |
MS.gene89699.t1 | AT5G53540 | 53.386 | 251 | 115 | 2 | 220 | 469 | 66 | 315 | 2.41e-89 | 281 |
MS.gene89699.t1 | AT2G45500 | 41.356 | 295 | 150 | 8 | 197 | 473 | 31 | 320 | 1.25e-65 | 218 |
MS.gene89699.t1 | AT2G45500 | 41.356 | 295 | 150 | 8 | 197 | 473 | 31 | 320 | 1.25e-65 | 218 |
MS.gene89699.t1 | AT3G27120 | 40.000 | 345 | 157 | 10 | 218 | 550 | 370 | 676 | 5.91e-65 | 224 |
MS.gene89699.t1 | AT2G45500 | 41.356 | 295 | 150 | 8 | 197 | 473 | 164 | 453 | 2.22e-64 | 218 |
MS.gene89699.t1 | AT2G45500 | 41.356 | 295 | 150 | 8 | 197 | 473 | 168 | 457 | 2.91e-64 | 218 |
MS.gene89699.t1 | AT2G45500 | 41.356 | 295 | 150 | 8 | 197 | 473 | 174 | 463 | 2.92e-64 | 218 |
MS.gene89699.t1 | AT1G80350 | 37.461 | 323 | 164 | 6 | 218 | 534 | 217 | 507 | 2.18e-62 | 214 |
MS.gene89699.t1 | AT2G34560 | 41.053 | 285 | 156 | 5 | 187 | 465 | 49 | 327 | 2.75e-62 | 210 |
MS.gene89699.t1 | AT2G34560 | 41.053 | 285 | 156 | 5 | 187 | 465 | 58 | 336 | 3.41e-62 | 210 |
MS.gene89699.t1 | AT2G27600 | 44.298 | 228 | 124 | 3 | 237 | 463 | 128 | 353 | 1.65e-57 | 199 |
MS.gene89699.t1 | AT3G53230 | 37.805 | 246 | 143 | 5 | 237 | 478 | 477 | 716 | 1.93e-48 | 181 |
MS.gene89699.t1 | AT3G53230 | 40.175 | 229 | 132 | 3 | 237 | 463 | 204 | 429 | 3.48e-47 | 177 |
MS.gene89699.t1 | AT3G09840 | 39.916 | 238 | 138 | 3 | 237 | 472 | 203 | 437 | 5.29e-48 | 179 |
MS.gene89699.t1 | AT3G09840 | 31.579 | 323 | 205 | 6 | 237 | 554 | 476 | 787 | 2.32e-46 | 174 |
MS.gene89699.t1 | AT5G03340 | 39.496 | 238 | 139 | 3 | 237 | 472 | 203 | 437 | 3.32e-47 | 177 |
MS.gene89699.t1 | AT5G03340 | 32.188 | 320 | 203 | 6 | 237 | 552 | 476 | 785 | 3.38e-47 | 177 |
MS.gene89699.t1 | AT2G26140 | 40.711 | 253 | 140 | 6 | 226 | 474 | 212 | 458 | 3.61e-44 | 167 |
MS.gene89699.t1 | AT1G45000 | 35.361 | 263 | 158 | 5 | 237 | 490 | 135 | 394 | 8.23e-44 | 160 |
MS.gene89699.t1 | AT3G56690 | 36.655 | 281 | 163 | 5 | 238 | 507 | 721 | 997 | 2.49e-43 | 166 |
MS.gene89699.t1 | AT3G56690 | 35.678 | 199 | 122 | 4 | 272 | 467 | 415 | 610 | 6.22e-33 | 135 |
MS.gene89699.t1 | AT5G43010 | 34.601 | 263 | 160 | 5 | 237 | 490 | 135 | 394 | 7.22e-43 | 158 |
MS.gene89699.t1 | AT1G53750 | 36.957 | 230 | 139 | 3 | 237 | 462 | 164 | 391 | 1.00e-42 | 158 |
MS.gene89699.t1 | AT4G29040 | 36.087 | 230 | 139 | 4 | 239 | 463 | 186 | 412 | 2.75e-41 | 155 |
MS.gene89699.t1 | AT1G50250 | 35.766 | 274 | 165 | 5 | 235 | 500 | 256 | 526 | 4.12e-41 | 158 |
MS.gene89699.t1 | AT2G20140 | 36.087 | 230 | 139 | 4 | 239 | 463 | 186 | 412 | 4.15e-41 | 154 |
MS.gene89699.t1 | AT5G19990 | 37.339 | 233 | 137 | 5 | 237 | 463 | 157 | 386 | 5.48e-41 | 153 |
MS.gene89699.t1 | AT5G19990 | 37.339 | 233 | 137 | 5 | 237 | 463 | 157 | 386 | 5.48e-41 | 153 |
MS.gene89699.t1 | AT5G20000 | 37.339 | 233 | 137 | 5 | 237 | 463 | 157 | 386 | 6.63e-41 | 153 |
MS.gene89699.t1 | AT5G19990 | 37.339 | 233 | 137 | 5 | 237 | 463 | 99 | 328 | 7.33e-41 | 152 |
MS.gene89699.t1 | AT5G42270 | 35.401 | 274 | 166 | 5 | 235 | 500 | 244 | 514 | 7.69e-41 | 157 |
MS.gene89699.t1 | AT5G15250 | 38.174 | 241 | 142 | 5 | 238 | 474 | 221 | 458 | 1.08e-40 | 157 |
MS.gene89699.t1 | AT5G58290 | 35.498 | 231 | 143 | 3 | 237 | 463 | 151 | 379 | 1.24e-39 | 149 |
MS.gene89699.t1 | AT3G01610 | 31.579 | 323 | 189 | 8 | 239 | 550 | 231 | 532 | 1.39e-39 | 154 |
MS.gene89699.t1 | AT3G01610 | 34.615 | 234 | 142 | 5 | 237 | 465 | 524 | 751 | 1.29e-33 | 136 |
MS.gene89699.t1 | AT2G30950 | 38.430 | 242 | 139 | 6 | 238 | 472 | 228 | 466 | 1.67e-39 | 154 |
MS.gene89699.t1 | AT2G30950 | 38.430 | 242 | 139 | 6 | 238 | 472 | 224 | 462 | 1.76e-39 | 153 |
MS.gene89699.t1 | AT2G30950 | 38.430 | 242 | 139 | 6 | 238 | 472 | 224 | 462 | 1.76e-39 | 153 |
MS.gene89699.t1 | AT2G30950 | 38.430 | 242 | 139 | 6 | 238 | 472 | 224 | 462 | 1.76e-39 | 153 |
MS.gene89699.t1 | AT3G01610 | 31.366 | 322 | 191 | 7 | 239 | 550 | 231 | 532 | 1.76e-39 | 154 |
MS.gene89699.t1 | AT3G01610 | 34.615 | 234 | 142 | 5 | 237 | 465 | 524 | 751 | 1.40e-33 | 136 |
MS.gene89699.t1 | AT1G09100 | 34.263 | 251 | 150 | 5 | 220 | 462 | 150 | 393 | 4.61e-39 | 148 |
MS.gene89699.t1 | AT1G53780 | 36.000 | 225 | 138 | 3 | 237 | 457 | 336 | 558 | 5.24e-39 | 151 |
MS.gene89699.t1 | AT1G53780 | 36.000 | 225 | 138 | 3 | 237 | 457 | 336 | 558 | 5.24e-39 | 151 |
MS.gene89699.t1 | AT1G53780 | 36.000 | 225 | 138 | 3 | 237 | 457 | 335 | 557 | 6.66e-39 | 150 |
MS.gene89699.t1 | AT3G05530 | 35.683 | 227 | 140 | 3 | 240 | 462 | 170 | 394 | 7.20e-39 | 147 |
MS.gene89699.t1 | AT1G53780 | 36.000 | 225 | 138 | 3 | 237 | 457 | 357 | 579 | 8.38e-39 | 150 |
MS.gene89699.t1 | AT1G03000 | 34.298 | 242 | 152 | 6 | 237 | 473 | 654 | 893 | 4.68e-38 | 150 |
MS.gene89699.t1 | AT3G47060 | 39.207 | 227 | 128 | 5 | 238 | 457 | 322 | 545 | 5.17e-38 | 150 |
MS.gene89699.t1 | AT5G53170 | 39.344 | 244 | 136 | 7 | 224 | 463 | 346 | 581 | 9.36e-38 | 149 |
MS.gene89699.t1 | AT1G06430 | 38.839 | 224 | 130 | 5 | 238 | 457 | 217 | 437 | 1.10e-37 | 148 |
MS.gene89699.t1 | AT1G06430 | 38.839 | 224 | 130 | 5 | 238 | 457 | 217 | 437 | 1.10e-37 | 148 |
MS.gene89699.t1 | AT1G06430 | 38.839 | 224 | 130 | 5 | 238 | 457 | 217 | 437 | 1.10e-37 | 148 |
MS.gene89699.t1 | AT1G05910 | 38.115 | 244 | 140 | 5 | 237 | 472 | 377 | 617 | 1.22e-37 | 149 |
MS.gene89699.t1 | AT1G07510 | 36.481 | 233 | 138 | 5 | 238 | 463 | 324 | 553 | 5.22e-37 | 147 |
MS.gene89699.t1 | AT5G15250 | 34.848 | 264 | 142 | 6 | 238 | 474 | 221 | 481 | 6.16e-37 | 144 |
MS.gene89699.t1 | AT5G58870 | 37.885 | 227 | 131 | 5 | 238 | 457 | 326 | 549 | 3.89e-36 | 144 |
MS.gene89699.t1 | AT2G29080 | 36.207 | 232 | 139 | 5 | 238 | 463 | 319 | 547 | 1.07e-35 | 143 |
MS.gene89699.t1 | AT5G08470 | 32.900 | 231 | 150 | 3 | 240 | 468 | 843 | 1070 | 1.19e-33 | 137 |
MS.gene89699.t1 | AT5G08470 | 32.900 | 231 | 150 | 3 | 240 | 468 | 834 | 1061 | 1.21e-33 | 137 |
MS.gene89699.t1 | AT3G02450 | 37.555 | 229 | 135 | 5 | 238 | 462 | 331 | 555 | 1.70e-33 | 135 |
MS.gene89699.t1 | AT2G03670 | 35.821 | 268 | 143 | 5 | 238 | 495 | 283 | 531 | 2.38e-33 | 135 |
MS.gene89699.t1 | AT2G03670 | 35.043 | 234 | 141 | 6 | 231 | 456 | 12 | 242 | 2.98e-30 | 125 |
MS.gene89699.t1 | AT3G16290 | 34.728 | 239 | 135 | 7 | 236 | 463 | 405 | 633 | 2.60e-33 | 135 |
MS.gene89699.t1 | AT4G23940 | 34.538 | 249 | 148 | 4 | 238 | 474 | 427 | 672 | 1.78e-32 | 133 |
MS.gene89699.t1 | AT2G03670 | 35.043 | 234 | 141 | 6 | 231 | 456 | 12 | 242 | 3.45e-31 | 126 |
MS.gene89699.t1 | AT2G03670 | 38.194 | 144 | 76 | 2 | 238 | 373 | 283 | 421 | 1.50e-16 | 82.8 |
MS.gene89699.t1 | AT3G15120 | 31.855 | 248 | 149 | 7 | 225 | 457 | 708 | 950 | 5.67e-30 | 126 |
MS.gene89699.t1 | AT3G15120 | 31.855 | 248 | 149 | 7 | 225 | 457 | 698 | 940 | 6.20e-30 | 126 |
MS.gene89699.t1 | AT5G64580 | 34.672 | 274 | 160 | 8 | 227 | 485 | 301 | 570 | 6.31e-30 | 125 |
MS.gene89699.t1 | AT4G04180 | 30.739 | 257 | 153 | 8 | 237 | 480 | 310 | 554 | 2.06e-29 | 123 |
MS.gene89699.t1 | AT4G04180 | 30.739 | 257 | 153 | 8 | 237 | 480 | 315 | 559 | 2.30e-29 | 123 |
MS.gene89699.t1 | AT1G79560 | 30.418 | 263 | 147 | 7 | 243 | 476 | 482 | 737 | 3.21e-28 | 120 |
MS.gene89699.t1 | AT1G79560 | 30.418 | 263 | 147 | 7 | 243 | 476 | 482 | 737 | 3.23e-28 | 120 |
MS.gene89699.t1 | AT1G79560 | 30.418 | 263 | 147 | 7 | 243 | 476 | 482 | 737 | 3.58e-28 | 120 |
MS.gene89699.t1 | AT1G45000 | 40.000 | 140 | 80 | 2 | 237 | 373 | 135 | 273 | 5.59e-26 | 109 |
MS.gene89699.t1 | AT4G04910 | 33.476 | 233 | 123 | 10 | 272 | 484 | 247 | 467 | 1.00e-20 | 97.1 |
MS.gene89699.t1 | AT5G08470 | 31.757 | 148 | 98 | 2 | 240 | 387 | 843 | 987 | 1.12e-18 | 90.9 |
MS.gene89699.t1 | AT3G04340 | 31.527 | 203 | 124 | 7 | 238 | 432 | 781 | 976 | 5.86e-18 | 88.6 |
MS.gene89699.t1 | AT5G16930 | 28.571 | 217 | 106 | 5 | 274 | 455 | 397 | 599 | 8.80e-16 | 81.3 |
MS.gene89699.t1 | AT3G03060 | 29.327 | 208 | 116 | 5 | 274 | 455 | 385 | 587 | 3.17e-15 | 79.3 |
MS.gene89699.t1 | AT2G18330 | 32.168 | 143 | 91 | 3 | 274 | 415 | 384 | 521 | 2.33e-14 | 76.6 |
MS.gene89699.t1 | AT4G36580 | 31.469 | 143 | 92 | 3 | 274 | 415 | 381 | 518 | 4.42e-13 | 72.4 |
Find 126 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCCGAGGAATATTGTTATT+TGG | 0.127056 | 4.4:+5017975 | MS.gene89699:CDS |
TTCCATTGAATTTCCCTTTA+CGG | 0.223604 | 4.4:-5017235 | None:intergenic |
TCTGGACCAATTCTGATTCT+TGG | 0.270915 | 4.4:+5016747 | MS.gene89699:CDS |
ATGAATTTGAAAAGCGAATA+AGG | 0.281806 | 4.4:+5017811 | MS.gene89699:CDS |
GCTTGCAGCAACCTGATTCT+TGG | 0.290000 | 4.4:-5019590 | None:intergenic |
ACAAGATGTGATTCATCTTC+TGG | 0.292156 | 4.4:-5016858 | None:intergenic |
TGTCTACCATCACTTCTAAA+TGG | 0.295424 | 4.4:+5018075 | MS.gene89699:CDS |
GCCGAGGAATATTGTTATTT+GGG | 0.310498 | 4.4:+5017976 | MS.gene89699:CDS |
ATATACCGGAAGTGATTTAA+AGG | 0.314180 | 4.4:+5018955 | MS.gene89699:CDS |
TGTATGGAGAAGGTGGTTCT+AGG | 0.324411 | 4.4:+5019662 | MS.gene89699:CDS |
CTCTGCCGAGGGAGCTGGAA+TGG | 0.345392 | 4.4:+5019615 | MS.gene89699:CDS |
ACTTGGATGAAGCTATTATA+AGG | 0.347356 | 4.4:+5018327 | MS.gene89699:CDS |
TCATTTGCTGGTATGACTTC+AGG | 0.347511 | 4.4:-5017834 | None:intergenic |
GATTCAGCAAGAGAGGTTAA+AGG | 0.352811 | 4.4:+5019314 | MS.gene89699:CDS |
GATGTTACATTCTCTGATAT+TGG | 0.354632 | 4.4:+5017861 | MS.gene89699:CDS |
GGTTCGCGAGTTCTAGATTC+TGG | 0.357554 | 4.4:+5016768 | MS.gene89699:CDS |
ATCCAAGTCAAATGGCCTAT+TGG | 0.357867 | 4.4:-5018312 | None:intergenic |
TTATTTGGGCCTCCTGGAAC+TGG | 0.359315 | 4.4:+5017990 | MS.gene89699:CDS |
TATGAAGATGATTCAAGTTC+AGG | 0.362767 | 4.4:+5016908 | MS.gene89699:CDS |
TCTATTGTAATGCAGAATTA+TGG | 0.369282 | 4.4:+5018823 | MS.gene89699:intron |
TTTCAAAGAGGCCAAGAATC+AGG | 0.374209 | 4.4:+5019579 | MS.gene89699:CDS |
TGCTGAATCAACTCTCTAAC+TGG | 0.385985 | 4.4:-5019300 | None:intergenic |
GACTACCATCTGTTGAGAAC+AGG | 0.395163 | 4.4:+5018849 | MS.gene89699:CDS |
CGTCGACAAATATAATAGTT+GGG | 0.395237 | 4.4:-5018154 | None:intergenic |
AGCTTCTCTGCCGAGGGAGC+TGG | 0.402753 | 4.4:+5019610 | MS.gene89699:CDS |
TGTGCACAACTGCTGCTTAT+CGG | 0.403241 | 4.4:+5019277 | MS.gene89699:CDS |
TATAATAGTTGGGGAGACTT+TGG | 0.410118 | 4.4:-5018144 | None:intergenic |
GTAACATCAATCTCATTTGC+TGG | 0.415172 | 4.4:-5017846 | None:intergenic |
TTGTTCTTGCAGCAACCAAT+AGG | 0.416450 | 4.4:+5018297 | MS.gene89699:CDS |
ACCATCACTTCTAAATGGTT+TGG | 0.418435 | 4.4:+5018080 | MS.gene89699:CDS |
AGCTAATTATTTCTTGCAAT+AGG | 0.423380 | 4.4:+5017105 | MS.gene89699:CDS |
TGTCAGCTGGAAGTCTCAAT+TGG | 0.424007 | 4.4:+5016878 | MS.gene89699:CDS |
GCTTTCCATTTCTGTATTCG+AGG | 0.424849 | 4.4:-5017085 | None:intergenic |
TGTCGTGAGCCCGTCCCAAT+GGG | 0.429515 | 4.4:-5018255 | None:intergenic |
ATATTGTTATTTGGGCCTCC+TGG | 0.432710 | 4.4:+5017984 | MS.gene89699:CDS |
CATTGGGTATATTCCGTAAA+GGG | 0.437041 | 4.4:+5017222 | MS.gene89699:CDS |
TGCTCCAGCTTCCTTTGCAA+TGG | 0.438187 | 4.4:-5018033 | None:intergenic |
TTGGGCAACGAACAAGAGTT+GGG | 0.443792 | 4.4:+5018192 | MS.gene89699:CDS |
CCTTAGGCCATTGAATATGC+AGG | 0.449647 | 4.4:+5019555 | MS.gene89699:CDS |
GAATGAATTTATGTCCCATT+GGG | 0.450075 | 4.4:+5018241 | MS.gene89699:CDS |
CGCGAACCAAGAATCAGAAT+TGG | 0.451265 | 4.4:-5016753 | None:intergenic |
TTGAAATCCTGCATATTCAA+TGG | 0.451870 | 4.4:-5019562 | None:intergenic |
AAAATGTTGAAGAGACTCTC+TGG | 0.452650 | 4.4:+5016729 | None:intergenic |
GGACTTTCCGCCTTCACTGC+TGG | 0.453814 | 4.4:-5017434 | None:intergenic |
TCGTCGACAAATATAATAGT+TGG | 0.460002 | 4.4:-5018155 | None:intergenic |
AACAGTTTGTCACATGCATT+GGG | 0.467253 | 4.4:+5017206 | MS.gene89699:intron |
GACGAGGTTGATAGCATGCT+TGG | 0.467447 | 4.4:+5018173 | MS.gene89699:CDS |
TGCTGCAAGCTTCTCTGCCG+AGG | 0.467858 | 4.4:+5019603 | MS.gene89699:CDS |
TTCCGTAAAGGGAAATTCAA+TGG | 0.468198 | 4.4:+5017233 | MS.gene89699:CDS |
TCTGCCGAGGGAGCTGGAAT+GGG | 0.470640 | 4.4:+5019616 | MS.gene89699:CDS |
AAAGACCTCGAATACAGAAA+TGG | 0.472233 | 4.4:+5017080 | MS.gene89699:CDS |
AACCAATAGGCCATTTGACT+TGG | 0.473055 | 4.4:+5018310 | MS.gene89699:CDS |
AAGGCCATTGCAAAGGAAGC+TGG | 0.473597 | 4.4:+5018029 | MS.gene89699:CDS |
TTGTCGTGAGCCCGTCCCAA+TGG | 0.476108 | 4.4:-5018256 | None:intergenic |
TAAGAAACAGAAAGCTACTA+AGG | 0.476792 | 4.4:+5019441 | MS.gene89699:CDS |
TTAGAAGTCCTCCAGTGAAA+AGG | 0.480190 | 4.4:-5017947 | None:intergenic |
TGATCTTGATTGCGATGACT+TGG | 0.483110 | 4.4:+5016968 | MS.gene89699:CDS |
GTCATCGCAATCAAGATCAT+TGG | 0.485493 | 4.4:-5016964 | None:intergenic |
CTCACCCATTCCAGCTCCCT+CGG | 0.486104 | 4.4:-5019620 | None:intergenic |
CCTGCATATTCAATGGCCTA+AGG | 0.491903 | 4.4:-5019555 | None:intergenic |
CTTGGGCAACGAACAAGAGT+TGG | 0.492617 | 4.4:+5018191 | MS.gene89699:CDS |
ATGAATCACATCTTGTCAGC+TGG | 0.498735 | 4.4:+5016865 | MS.gene89699:CDS |
AGAATGAATTTATGTCCCAT+TGG | 0.500121 | 4.4:+5018240 | MS.gene89699:CDS |
AAATACTCAAGAAGCAAAAG+AGG | 0.500539 | 4.4:+5019504 | MS.gene89699:CDS |
ATAGCTTCATCCAAGTCAAA+TGG | 0.508582 | 4.4:-5018320 | None:intergenic |
ACTGGAGCAGCACTTTCAGC+AGG | 0.511785 | 4.4:-5017461 | None:intergenic |
GAGAGTTGATTCAGCAAGAG+AGG | 0.513144 | 4.4:+5019307 | MS.gene89699:CDS |
ACCAAACCATTTAGAAGTGA+TGG | 0.513218 | 4.4:-5018081 | None:intergenic |
AGTCCTCCAGTGAAAAGGTC+TGG | 0.513876 | 4.4:-5017942 | None:intergenic |
TGGTAATGAATTCGAAGAGT+TGG | 0.516128 | 4.4:+5016788 | MS.gene89699:CDS |
TGGAAGAGATACATCAAAGA+TGG | 0.516754 | 4.4:+5017253 | MS.gene89699:CDS |
AATTTATGTCCCATTGGGAC+GGG | 0.517317 | 4.4:+5018246 | MS.gene89699:CDS |
GAAAAGGTCTGGCCTTCGTA+GGG | 0.518674 | 4.4:-5017931 | None:intergenic |
GCATTGGGTATATTCCGTAA+AGG | 0.526760 | 4.4:+5017221 | MS.gene89699:CDS |
CTGCATATTCAATGGCCTAA+GGG | 0.528080 | 4.4:-5019554 | None:intergenic |
CATTGTGTCTTCCACACAGA+TGG | 0.532739 | 4.4:-5016994 | None:intergenic |
AAGAAAGAGTTATTACCCTT+AGG | 0.535403 | 4.4:+5019539 | MS.gene89699:CDS |
GCTGCAAGCTTCTCTGCCGA+GGG | 0.538756 | 4.4:+5019604 | MS.gene89699:CDS |
GAACAGTTTGTCACATGCAT+TGG | 0.539309 | 4.4:+5017205 | MS.gene89699:intron |
GGTCTGATTTCTATATCGTA+CGG | 0.540422 | 4.4:-5016834 | None:intergenic |
ACGAGGTTGATAGCATGCTT+GGG | 0.541655 | 4.4:+5018174 | MS.gene89699:CDS |
ACCATGACAGACGGATATAC+CGG | 0.543702 | 4.4:+5018941 | MS.gene89699:CDS |
ACAACAGTTTCTACCACGCT+CGG | 0.546133 | 4.4:-5017407 | None:intergenic |
CTGGAAGTCTCAATTGGAAG+AGG | 0.550882 | 4.4:+5016884 | MS.gene89699:CDS |
GAATTTATGTCCCATTGGGA+CGG | 0.552908 | 4.4:+5018245 | MS.gene89699:CDS |
TCAACTTCAGTGGCAAAGGC+AGG | 0.553933 | 4.4:+5017506 | MS.gene89699:CDS |
GTCTGATTTCTATATCGTAC+GGG | 0.555729 | 4.4:-5016833 | None:intergenic |
TGAAAAGGTCTGGCCTTCGT+AGG | 0.560850 | 4.4:-5017932 | None:intergenic |
AATAACAATATTCCTCGGCA+TGG | 0.570070 | 4.4:-5017972 | None:intergenic |
TATTGGTTGCTGCAAGAACA+AGG | 0.570440 | 4.4:-5018295 | None:intergenic |
ACACAATGGAATGATCTGTA+TGG | 0.570808 | 4.4:+5019646 | MS.gene89699:CDS |
TGTTGTGAAACCAGCAGTGA+AGG | 0.570947 | 4.4:+5017424 | MS.gene89699:CDS |
GCAGCACTTTCAGCAGGAGG+AGG | 0.576838 | 4.4:-5017455 | None:intergenic |
CTATTATAAGGCGATTTGAA+AGG | 0.578264 | 4.4:+5018339 | MS.gene89699:CDS |
TCCGGTATATCCGTCTGTCA+TGG | 0.580164 | 4.4:-5018942 | None:intergenic |
GCCCAAATAACAATATTCCT+CGG | 0.581038 | 4.4:-5017977 | None:intergenic |
GACGGGCTCACGACAAAACA+AGG | 0.585226 | 4.4:+5018263 | MS.gene89699:CDS |
AATATCAACTTCAGTGGCAA+AGG | 0.588775 | 4.4:+5017502 | MS.gene89699:CDS |
ACTACCATCTGTTGAGAACA+GGG | 0.590750 | 4.4:+5018850 | MS.gene89699:CDS |
GCAAGAGAGGTTAAAGGACC+TGG | 0.591773 | 4.4:+5019320 | MS.gene89699:CDS |
GTCGACAAATATAATAGTTG+GGG | 0.592837 | 4.4:-5018153 | None:intergenic |
TTATAAGGCGATTTGAAAGG+AGG | 0.598715 | 4.4:+5018342 | MS.gene89699:CDS |
GCTGGCAAAGGCCATTGCAA+AGG | 0.601879 | 4.4:+5018022 | MS.gene89699:CDS |
AACTATTATATTTGTCGACG+AGG | 0.602092 | 4.4:+5018157 | MS.gene89699:CDS |
GAATGGGTGAGCTGACACAA+TGG | 0.609246 | 4.4:+5019632 | MS.gene89699:CDS |
GAATATGCAGGATTTCAAAG+AGG | 0.609477 | 4.4:+5019567 | MS.gene89699:CDS |
TTGTAATGCAGAATTATGGT+AGG | 0.614621 | 4.4:+5018827 | MS.gene89699:intron |
GAACATAAAGATTCCGAGCG+TGG | 0.616823 | 4.4:+5017394 | MS.gene89699:intron |
TTTAGAAGTGATGGTAGACA+TGG | 0.625906 | 4.4:-5018072 | None:intergenic |
CATCTGTGTGGAAGACACAA+TGG | 0.629950 | 4.4:+5016995 | MS.gene89699:CDS |
GGATCAAGCTCTAAAATCTG+AGG | 0.630828 | 4.4:+5017277 | MS.gene89699:CDS |
AGCAGAAATATCAACTTCAG+TGG | 0.635357 | 4.4:+5017496 | MS.gene89699:CDS |
AGATGTGATTCATCTTCTGG+AGG | 0.643446 | 4.4:-5016855 | None:intergenic |
TAGTAATGCTTCCCCTACGA+AGG | 0.644889 | 4.4:+5017919 | MS.gene89699:CDS |
AAGAGATACATCAAAGATGG+AGG | 0.649416 | 4.4:+5017256 | MS.gene89699:CDS |
TGGAATGATCTGTATGGAGA+AGG | 0.649551 | 4.4:+5019652 | MS.gene89699:CDS |
AGGGTAATAACTCTTTCTTG+TGG | 0.655070 | 4.4:-5019535 | None:intergenic |
GGAGCAGCACTTTCAGCAGG+AGG | 0.656104 | 4.4:-5017458 | None:intergenic |
TGGGCAACGAACAAGAGTTG+GGG | 0.663916 | 4.4:+5018193 | MS.gene89699:CDS |
TGTGAAACCAGCAGTGAAGG+CGG | 0.664475 | 4.4:+5017427 | MS.gene89699:CDS |
AAAAGGTCTGGCCTTCGTAG+GGG | 0.686155 | 4.4:-5017930 | None:intergenic |
AATGATCTGTATGGAGAAGG+TGG | 0.695370 | 4.4:+5019655 | MS.gene89699:CDS |
TGACTTGGATTCCATCTGTG+TGG | 0.695762 | 4.4:+5016983 | MS.gene89699:CDS |
GGACTTCTAAAACCATGCCG+AGG | 0.702159 | 4.4:+5017960 | MS.gene89699:CDS |
GAACTCGCGACCATGACAGA+CGG | 0.704046 | 4.4:+5018932 | MS.gene89699:CDS |
TTGGGGAGCATGAAGCCATG+CGG | 0.720295 | 4.4:+5018210 | MS.gene89699:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATATTTTAAAGACTAAAT+TGG | + | chr4.4:5018667-5018686 | MS.gene89699:intron | 10.0% |
!!! | TTATTATATTTCTATATTCT+CGG | - | chr4.4:5018542-5018561 | None:intergenic | 10.0% |
!! | TGTAGTACTATATTATTATA+GGG | - | chr4.4:5019206-5019225 | None:intergenic | 15.0% |
!! | TTAATCTTAATTTATGTTGA+GGG | + | chr4.4:5018725-5018744 | MS.gene89699:intron | 15.0% |
!! | TTGTAGTACTATATTATTAT+AGG | - | chr4.4:5019207-5019226 | None:intergenic | 15.0% |
!! | TTTAATCTTAATTTATGTTG+AGG | + | chr4.4:5018724-5018743 | MS.gene89699:intron | 15.0% |
!!! | ATATTTTCTTATGTTTTCAA+TGG | + | chr4.4:5018989-5019008 | MS.gene89699:intron | 15.0% |
!!! | GAAATTTTGATTAAAAACAA+AGG | - | chr4.4:5017571-5017590 | None:intergenic | 15.0% |
!! | AATAAATGCATATTAGTACA+AGG | - | chr4.4:5017358-5017377 | None:intergenic | 20.0% |
!! | AGATGTTAAAACATAATTTC+TGG | - | chr4.4:5019351-5019370 | None:intergenic | 20.0% |
!! | GATGTTAAAACATAATTTCT+GGG | - | chr4.4:5019350-5019369 | None:intergenic | 20.0% |
!! | TAAAATAAACAGCATATAGA+AGG | - | chr4.4:5019411-5019430 | None:intergenic | 20.0% |
! | AAAAAAGCAGAGAAATAAAG+TGG | - | chr4.4:5018413-5018432 | None:intergenic | 25.0% |
! | AAAAACCTTTAAATCACTTC+CGG | - | chr4.4:5018963-5018982 | None:intergenic | 25.0% |
! | AATAAGTTGTTTATCCAAAC+AGG | + | chr4.4:5019180-5019199 | MS.gene89699:intron | 25.0% |
! | ATACACACACAAAATATAGA+TGG | - | chr4.4:5018776-5018795 | None:intergenic | 25.0% |
! | ATGAATTTGAAAAGCGAATA+AGG | + | chr4.4:5017811-5017830 | MS.gene89699:CDS | 25.0% |
! | GACTTCATATCTTAAGATTT+AGG | + | chr4.4:5017667-5017686 | MS.gene89699:intron | 25.0% |
! | TCAAATAAACCAATCTAAAC+AGG | - | chr4.4:5019028-5019047 | None:intergenic | 25.0% |
! | TCTATTGTAATGCAGAATTA+TGG | + | chr4.4:5018823-5018842 | MS.gene89699:intron | 25.0% |
! | TGGCATAATAAAATGAAGAA+TGG | - | chr4.4:5018393-5018412 | None:intergenic | 25.0% |
!! | AGCTAATTATTTCTTGCAAT+AGG | + | chr4.4:5017105-5017124 | MS.gene89699:CDS | 25.0% |
!! | TATATTTTGTGTGTGTATGT+GGG | + | chr4.4:5018778-5018797 | MS.gene89699:intron | 25.0% |
!! | TTTTCAAATTCATTATCAGG+AGG | - | chr4.4:5017804-5017823 | None:intergenic | 25.0% |
!! | TTTTCAATGGACATAACTAT+GGG | + | chr4.4:5019002-5019021 | MS.gene89699:intron | 25.0% |
!!! | CATGAACTTATTTCTATAGA+GGG | - | chr4.4:5018599-5018618 | None:intergenic | 25.0% |
!!! | CTGATAATGTGTTTTCATTA+TGG | + | chr4.4:5019382-5019401 | MS.gene89699:intron | 25.0% |
!!! | GGACAAAGAAATTGATTTTA+AGG | + | chr4.4:5018910-5018929 | MS.gene89699:CDS | 25.0% |
!!! | TCATGAACTTATTTCTATAG+AGG | - | chr4.4:5018600-5018619 | None:intergenic | 25.0% |
!!! | TGCTGTTTATTTTACTTAAC+AGG | + | chr4.4:5019417-5019436 | MS.gene89699:intron | 25.0% |
AAATACTCAAGAAGCAAAAG+AGG | + | chr4.4:5019504-5019523 | MS.gene89699:CDS | 30.0% | |
AACTATTATATTTGTCGACG+AGG | + | chr4.4:5018157-5018176 | MS.gene89699:CDS | 30.0% | |
AAGAAAGAGTTATTACCCTT+AGG | + | chr4.4:5019539-5019558 | MS.gene89699:CDS | 30.0% | |
AAGTTCATGAATCAACATGA+TGG | + | chr4.4:5018610-5018629 | MS.gene89699:intron | 30.0% | |
ACTTGGATGAAGCTATTATA+AGG | + | chr4.4:5018327-5018346 | MS.gene89699:CDS | 30.0% | |
AGAATGAATTTATGTCCCAT+TGG | + | chr4.4:5018240-5018259 | MS.gene89699:CDS | 30.0% | |
ATATACCGGAAGTGATTTAA+AGG | + | chr4.4:5018955-5018974 | MS.gene89699:CDS | 30.0% | |
ATATTATTATAGGGCCTGTT+TGG | - | chr4.4:5019197-5019216 | None:intergenic | 30.0% | |
ATCAGAAAAAAAGAAGAGAG+AGG | - | chr4.4:5017718-5017737 | None:intergenic | 30.0% | |
CAAAAATACTCAAGAAGCAA+AGG | + | chr4.4:5019471-5019490 | MS.gene89699:CDS | 30.0% | |
CCATAACTTAACCAAAAAGT+GGG | - | chr4.4:5018470-5018489 | None:intergenic | 30.0% | |
CGTCGACAAATATAATAGTT+GGG | - | chr4.4:5018157-5018176 | None:intergenic | 30.0% | |
CTATTATAAGGCGATTTGAA+AGG | + | chr4.4:5018339-5018358 | MS.gene89699:CDS | 30.0% | |
GAATGAATTTATGTCCCATT+GGG | + | chr4.4:5018241-5018260 | MS.gene89699:CDS | 30.0% | |
GATGTTACATTCTCTGATAT+TGG | + | chr4.4:5017861-5017880 | MS.gene89699:CDS | 30.0% | |
GTCGACAAATATAATAGTTG+GGG | - | chr4.4:5018156-5018175 | None:intergenic | 30.0% | |
TAAGAAACAGAAAGCTACTA+AGG | + | chr4.4:5019441-5019460 | MS.gene89699:CDS | 30.0% | |
TACTTTACATATTCACTTGC+AGG | + | chr4.4:5017773-5017792 | MS.gene89699:intron | 30.0% | |
TAGCTTAGAGATCAAATTGA+AGG | + | chr4.4:5018701-5018720 | MS.gene89699:intron | 30.0% | |
TCCATAACTTAACCAAAAAG+TGG | - | chr4.4:5018471-5018490 | None:intergenic | 30.0% | |
TCGTCGACAAATATAATAGT+TGG | - | chr4.4:5018158-5018177 | None:intergenic | 30.0% | |
TTAATTTATGTTGAGGGAGA+AGG | + | chr4.4:5018731-5018750 | MS.gene89699:intron | 30.0% | |
TTCCATTGAATTTCCCTTTA+CGG | - | chr4.4:5017238-5017257 | None:intergenic | 30.0% | |
TTGAAATCCTGCATATTCAA+TGG | - | chr4.4:5019565-5019584 | None:intergenic | 30.0% | |
TTGTAATGCAGAATTATGGT+AGG | + | chr4.4:5018827-5018846 | MS.gene89699:intron | 30.0% | |
! | AGAACAGGGAAAAGATTTTA+AGG | + | chr4.4:5018864-5018883 | MS.gene89699:CDS | 30.0% |
! | CGCTTTTCAAATTCATTATC+AGG | - | chr4.4:5017807-5017826 | None:intergenic | 30.0% |
! | CTATATTTTGTGTGTGTATG+TGG | + | chr4.4:5018777-5018796 | MS.gene89699:intron | 30.0% |
! | GACTCTTTTGTCAAAAGAAA+AGG | + | chr4.4:5018886-5018905 | MS.gene89699:CDS | 30.0% |
! | GTTTTCAATGGACATAACTA+TGG | + | chr4.4:5019001-5019020 | MS.gene89699:intron | 30.0% |
! | TATGAAGATGATTCAAGTTC+AGG | + | chr4.4:5016908-5016927 | MS.gene89699:CDS | 30.0% |
! | TCTTTTGTCAAAAGAAAAGG+TGG | + | chr4.4:5018889-5018908 | MS.gene89699:CDS | 30.0% |
!!! | TTCATTCTTTATTTTCCGCA+TGG | - | chr4.4:5018228-5018247 | None:intergenic | 30.0% |
AAAGACCTCGAATACAGAAA+TGG | + | chr4.4:5017080-5017099 | MS.gene89699:CDS | 35.0% | |
AAAGTTTGCAGCAAAGATCA+AGG | - | chr4.4:5019244-5019263 | None:intergenic | 35.0% | |
AACAGTTTGTCACATGCATT+GGG | + | chr4.4:5017206-5017225 | MS.gene89699:intron | 35.0% | |
AAGAGATACATCAAAGATGG+AGG | + | chr4.4:5017256-5017275 | MS.gene89699:CDS | 35.0% | |
AAGCTTAATACTCGACAGAT+AGG | + | chr4.4:5017634-5017653 | MS.gene89699:intron | 35.0% | |
AATAACAATATTCCTCGGCA+TGG | - | chr4.4:5017975-5017994 | None:intergenic | 35.0% | |
AATACTCGACAGATAGGTAT+TGG | + | chr4.4:5017640-5017659 | MS.gene89699:intron | 35.0% | |
AATATCAACTTCAGTGGCAA+AGG | + | chr4.4:5017502-5017521 | MS.gene89699:CDS | 35.0% | |
ACAAGATGTGATTCATCTTC+TGG | - | chr4.4:5016861-5016880 | None:intergenic | 35.0% | |
ACACAATGGAATGATCTGTA+TGG | + | chr4.4:5019646-5019665 | MS.gene89699:CDS | 35.0% | |
ACCAAACCATTTAGAAGTGA+TGG | - | chr4.4:5018084-5018103 | None:intergenic | 35.0% | |
ACCATCACTTCTAAATGGTT+TGG | + | chr4.4:5018080-5018099 | MS.gene89699:CDS | 35.0% | |
AGCAGAAATATCAACTTCAG+TGG | + | chr4.4:5017496-5017515 | MS.gene89699:CDS | 35.0% | |
AGGGTAATAACTCTTTCTTG+TGG | - | chr4.4:5019538-5019557 | None:intergenic | 35.0% | |
ATAGCTTCATCCAAGTCAAA+TGG | - | chr4.4:5018323-5018342 | None:intergenic | 35.0% | |
CATTGGGTATATTCCGTAAA+GGG | + | chr4.4:5017222-5017241 | MS.gene89699:CDS | 35.0% | |
CTGTTCCACAAGAATTAGTA+AGG | - | chr4.4:5017191-5017210 | None:intergenic | 35.0% | |
GAATATGCAGGATTTCAAAG+AGG | + | chr4.4:5019567-5019586 | MS.gene89699:CDS | 35.0% | |
GATGTCCTTACTAATTCTTG+TGG | + | chr4.4:5017183-5017202 | MS.gene89699:intron | 35.0% | |
GCCCAAATAACAATATTCCT+CGG | - | chr4.4:5017980-5017999 | None:intergenic | 35.0% | |
GGTCTGATTTCTATATCGTA+CGG | - | chr4.4:5016837-5016856 | None:intergenic | 35.0% | |
GTAACATCAATCTCATTTGC+TGG | - | chr4.4:5017849-5017868 | None:intergenic | 35.0% | |
GTCTGATTTCTATATCGTAC+GGG | - | chr4.4:5016836-5016855 | None:intergenic | 35.0% | |
TATAATAGTTGGGGAGACTT+TGG | - | chr4.4:5018147-5018166 | None:intergenic | 35.0% | |
TCAACTATTGTCAATCCATC+AGG | + | chr4.4:5018570-5018589 | MS.gene89699:intron | 35.0% | |
TGAGGGAGAAGGAAAAATTA+TGG | + | chr4.4:5018742-5018761 | MS.gene89699:intron | 35.0% | |
TGGAAGAGATACATCAAAGA+TGG | + | chr4.4:5017253-5017272 | MS.gene89699:CDS | 35.0% | |
TGTCTACCATCACTTCTAAA+TGG | + | chr4.4:5018075-5018094 | MS.gene89699:CDS | 35.0% | |
TTATAAGGCGATTTGAAAGG+AGG | + | chr4.4:5018342-5018361 | MS.gene89699:CDS | 35.0% | |
TTCCGTAAAGGGAAATTCAA+TGG | + | chr4.4:5017233-5017252 | MS.gene89699:CDS | 35.0% | |
TTCTATATTCTCGGCCAAAT+AGG | - | chr4.4:5018533-5018552 | None:intergenic | 35.0% | |
TTTAGAAGTGATGGTAGACA+TGG | - | chr4.4:5018075-5018094 | None:intergenic | 35.0% | |
! | CGATTCTTTTGTCTCTTCTA+AGG | - | chr4.4:5017889-5017908 | None:intergenic | 35.0% |
! | TGCCGAGGAATATTGTTATT+TGG | + | chr4.4:5017975-5017994 | MS.gene89699:CDS | 35.0% |
! | TGGTAATGAATTCGAAGAGT+TGG | + | chr4.4:5016788-5016807 | MS.gene89699:CDS | 35.0% |
!! | ACATAATTTCTGGGATTACC+AGG | - | chr4.4:5019341-5019360 | None:intergenic | 35.0% |
!! | GATGGATTGACAATAGTTGA+GGG | - | chr4.4:5018570-5018589 | None:intergenic | 35.0% |
!! | GCCGAGGAATATTGTTATTT+GGG | + | chr4.4:5017976-5017995 | MS.gene89699:CDS | 35.0% |
!! | TAAGCTTTGTGAGACTGTTT+TGG | + | chr4.4:5019063-5019082 | MS.gene89699:intron | 35.0% |
!! | TGATGGATTGACAATAGTTG+AGG | - | chr4.4:5018571-5018590 | None:intergenic | 35.0% |
!!! | CCCACTTTTTGGTTAAGTTA+TGG | + | chr4.4:5018467-5018486 | MS.gene89699:intron | 35.0% |
AACCAATAGGCCATTTGACT+TGG | + | chr4.4:5018310-5018329 | MS.gene89699:CDS | 40.0% | |
AACTATGGGCCTGTTTAGAT+TGG | + | chr4.4:5019016-5019035 | MS.gene89699:intron | 40.0% | |
AATGATCTGTATGGAGAAGG+TGG | + | chr4.4:5019655-5019674 | MS.gene89699:CDS | 40.0% | |
AATTTATGTCCCATTGGGAC+GGG | + | chr4.4:5018246-5018265 | MS.gene89699:CDS | 40.0% | |
ACTACCATCTGTTGAGAACA+GGG | + | chr4.4:5018850-5018869 | MS.gene89699:CDS | 40.0% | |
AGATGTGATTCATCTTCTGG+AGG | - | chr4.4:5016858-5016877 | None:intergenic | 40.0% | |
ATCCAAGTCAAATGGCCTAT+TGG | - | chr4.4:5018315-5018334 | None:intergenic | 40.0% | |
ATGAATCACATCTTGTCAGC+TGG | + | chr4.4:5016865-5016884 | MS.gene89699:CDS | 40.0% | |
CTACGATTCTCTCTCCTATT+TGG | + | chr4.4:5018516-5018535 | MS.gene89699:intron | 40.0% | |
CTGCATATTCAATGGCCTAA+GGG | - | chr4.4:5019557-5019576 | None:intergenic | 40.0% | |
GAACAGTTTGTCACATGCAT+TGG | + | chr4.4:5017205-5017224 | MS.gene89699:intron | 40.0% | |
GAATTTATGTCCCATTGGGA+CGG | + | chr4.4:5018245-5018264 | MS.gene89699:CDS | 40.0% | |
GATTCAGCAAGAGAGGTTAA+AGG | + | chr4.4:5019314-5019333 | MS.gene89699:CDS | 40.0% | |
GCATATTAGTACAAGGCTGT+TGG | - | chr4.4:5017351-5017370 | None:intergenic | 40.0% | |
GCATTGGGTATATTCCGTAA+AGG | + | chr4.4:5017221-5017240 | MS.gene89699:CDS | 40.0% | |
GCTTTCCATTTCTGTATTCG+AGG | - | chr4.4:5017088-5017107 | None:intergenic | 40.0% | |
GTCATCGCAATCAAGATCAT+TGG | - | chr4.4:5016967-5016986 | None:intergenic | 40.0% | |
TCTGGACCAATTCTGATTCT+TGG | + | chr4.4:5016747-5016766 | MS.gene89699:CDS | 40.0% | |
TGATCTTGATTGCGATGACT+TGG | + | chr4.4:5016968-5016987 | MS.gene89699:CDS | 40.0% | |
TGCTGAATCAACTCTCTAAC+TGG | - | chr4.4:5019303-5019322 | None:intergenic | 40.0% | |
TGGAATGATCTGTATGGAGA+AGG | + | chr4.4:5019652-5019671 | MS.gene89699:CDS | 40.0% | |
TTAGAAGTCCTCCAGTGAAA+AGG | - | chr4.4:5017950-5017969 | None:intergenic | 40.0% | |
TTGTTCTTGCAGCAACCAAT+AGG | + | chr4.4:5018297-5018316 | MS.gene89699:CDS | 40.0% | |
TTTCAAAGAGGCCAAGAATC+AGG | + | chr4.4:5019579-5019598 | MS.gene89699:CDS | 40.0% | |
! | AAGTGCTGCTCCAGTAAAAA+AGG | + | chr4.4:5017469-5017488 | MS.gene89699:CDS | 40.0% |
! | AGGCTTACAGAAGCTTTTGA+TGG | - | chr4.4:5017551-5017570 | None:intergenic | 40.0% |
! | CTTACAGAAGCTTTTGATGG+TGG | - | chr4.4:5017548-5017567 | None:intergenic | 40.0% |
! | TATTGGTTGCTGCAAGAACA+AGG | - | chr4.4:5018298-5018317 | None:intergenic | 40.0% |
! | TCATTTGCTGGTATGACTTC+AGG | - | chr4.4:5017837-5017856 | None:intergenic | 40.0% |
! | TTTTCCCTGTTCTCAACAGA+TGG | - | chr4.4:5018857-5018876 | None:intergenic | 40.0% |
!! | ATATTGTTATTTGGGCCTCC+TGG | + | chr4.4:5017984-5018003 | MS.gene89699:CDS | 40.0% |
!! | GGATCAAGCTCTAAAATCTG+AGG | + | chr4.4:5017277-5017296 | MS.gene89699:CDS | 40.0% |
!!! | GAGGTGTGTCAATTAGCTTT+TGG | + | chr4.4:5018361-5018380 | MS.gene89699:intron | 40.0% |
!!! | TCTGCTTCAGCCTTTTTTAC+TGG | - | chr4.4:5017482-5017501 | None:intergenic | 40.0% |
ACAACAGTTTCTACCACGCT+CGG | - | chr4.4:5017410-5017429 | None:intergenic | 45.0% | |
ACCATGACAGACGGATATAC+CGG | + | chr4.4:5018941-5018960 | MS.gene89699:CDS | 45.0% | |
CAAAAAGTGGGCGACAAAGA+TGG | - | chr4.4:5018458-5018477 | None:intergenic | 45.0% | |
CATCTGTGTGGAAGACACAA+TGG | + | chr4.4:5016995-5017014 | MS.gene89699:CDS | 45.0% | |
CATTGTGTCTTCCACACAGA+TGG | - | chr4.4:5016997-5017016 | None:intergenic | 45.0% | |
CCTGCATATTCAATGGCCTA+AGG | - | chr4.4:5019558-5019577 | None:intergenic | 45.0% | |
CCTTAGGCCATTGAATATGC+AGG | + | chr4.4:5019555-5019574 | MS.gene89699:CDS | 45.0% | |
CGCGAACCAAGAATCAGAAT+TGG | - | chr4.4:5016756-5016775 | None:intergenic | 45.0% | |
CTGGAAGTCTCAATTGGAAG+AGG | + | chr4.4:5016884-5016903 | MS.gene89699:CDS | 45.0% | |
GAACATAAAGATTCCGAGCG+TGG | + | chr4.4:5017394-5017413 | MS.gene89699:intron | 45.0% | |
GACTACCATCTGTTGAGAAC+AGG | + | chr4.4:5018849-5018868 | MS.gene89699:CDS | 45.0% | |
TAGTAATGCTTCCCCTACGA+AGG | + | chr4.4:5017919-5017938 | MS.gene89699:CDS | 45.0% | |
TGGAAAAACGATGCTGGCAA+AGG | + | chr4.4:5018010-5018029 | MS.gene89699:CDS | 45.0% | |
TGGAACTGGAAAAACGATGC+TGG | + | chr4.4:5018004-5018023 | MS.gene89699:CDS | 45.0% | |
TGTATGGAGAAGGTGGTTCT+AGG | + | chr4.4:5019662-5019681 | MS.gene89699:CDS | 45.0% | |
TGTCAGCTGGAAGTCTCAAT+TGG | + | chr4.4:5016878-5016897 | MS.gene89699:CDS | 45.0% | |
TGTTGTGAAACCAGCAGTGA+AGG | + | chr4.4:5017424-5017443 | MS.gene89699:CDS | 45.0% | |
TTCTATAGAGGGACACCTGA+TGG | - | chr4.4:5018588-5018607 | None:intergenic | 45.0% | |
TTGGGCAACGAACAAGAGTT+GGG | + | chr4.4:5018192-5018211 | MS.gene89699:CDS | 45.0% | |
! | GAGAGTTGATTCAGCAAGAG+AGG | + | chr4.4:5019307-5019326 | MS.gene89699:CDS | 45.0% |
! | TGACTTGGATTCCATCTGTG+TGG | + | chr4.4:5016983-5017002 | MS.gene89699:CDS | 45.0% |
! | TGTGCACAACTGCTGCTTAT+CGG | + | chr4.4:5019277-5019296 | MS.gene89699:CDS | 45.0% |
!! | AAAGGCAGGTGCTGAAAAAC+CGG | + | chr4.4:5017520-5017539 | MS.gene89699:CDS | 45.0% |
!! | ACGAGGTTGATAGCATGCTT+GGG | + | chr4.4:5018174-5018193 | MS.gene89699:CDS | 45.0% |
!! | AGCATCGTTTTTCCAGTTCC+AGG | - | chr4.4:5018005-5018024 | None:intergenic | 45.0% |
!! | ATCGTTTTTCCAGTTCCAGG+AGG | - | chr4.4:5018002-5018021 | None:intergenic | 45.0% |
!! | CATCTTTGTCGCCCACTTTT+TGG | + | chr4.4:5018456-5018475 | MS.gene89699:intron | 45.0% |
!!! | GAAGCTTTTGATGGTGGAAC+CGG | - | chr4.4:5017542-5017561 | None:intergenic | 45.0% |
AAGGCCATTGCAAAGGAAGC+TGG | + | chr4.4:5018029-5018048 | MS.gene89699:CDS | 50.0% | |
AGTCCTCCAGTGAAAAGGTC+TGG | - | chr4.4:5017945-5017964 | None:intergenic | 50.0% | |
CTTGGGCAACGAACAAGAGT+TGG | + | chr4.4:5018191-5018210 | MS.gene89699:CDS | 50.0% | |
GAATGGGTGAGCTGACACAA+TGG | + | chr4.4:5019632-5019651 | MS.gene89699:CDS | 50.0% | |
GCAAGAGAGGTTAAAGGACC+TGG | + | chr4.4:5019320-5019339 | MS.gene89699:CDS | 50.0% | |
GCTTGCAGCAACCTGATTCT+TGG | - | chr4.4:5019593-5019612 | None:intergenic | 50.0% | |
TCAACTTCAGTGGCAAAGGC+AGG | + | chr4.4:5017506-5017525 | MS.gene89699:CDS | 50.0% | |
TCCGGTATATCCGTCTGTCA+TGG | - | chr4.4:5018945-5018964 | None:intergenic | 50.0% | |
TGCTCCAGCTTCCTTTGCAA+TGG | - | chr4.4:5018036-5018055 | None:intergenic | 50.0% | |
TGGGCAACGAACAAGAGTTG+GGG | + | chr4.4:5018193-5018212 | MS.gene89699:CDS | 50.0% | |
TGTGAAACCAGCAGTGAAGG+CGG | + | chr4.4:5017427-5017446 | MS.gene89699:CDS | 50.0% | |
TTATTTGGGCCTCCTGGAAC+TGG | + | chr4.4:5017990-5018009 | MS.gene89699:CDS | 50.0% | |
! | AAAAGGTCTGGCCTTCGTAG+GGG | - | chr4.4:5017933-5017952 | None:intergenic | 50.0% |
! | GAAAAGGTCTGGCCTTCGTA+GGG | - | chr4.4:5017934-5017953 | None:intergenic | 50.0% |
! | TGAAAAGGTCTGGCCTTCGT+AGG | - | chr4.4:5017935-5017954 | None:intergenic | 50.0% |
!! | GACGAGGTTGATAGCATGCT+TGG | + | chr4.4:5018173-5018192 | MS.gene89699:CDS | 50.0% |
!! | GGACTTCTAAAACCATGCCG+AGG | + | chr4.4:5017960-5017979 | MS.gene89699:CDS | 50.0% |
!! | GGTTCGCGAGTTCTAGATTC+TGG | + | chr4.4:5016768-5016787 | MS.gene89699:CDS | 50.0% |
ACTGGAGCAGCACTTTCAGC+AGG | - | chr4.4:5017464-5017483 | None:intergenic | 55.0% | |
GAACTCGCGACCATGACAGA+CGG | + | chr4.4:5018932-5018951 | MS.gene89699:CDS | 55.0% | |
GCTGGCAAAGGCCATTGCAA+AGG | + | chr4.4:5018022-5018041 | MS.gene89699:CDS | 55.0% | |
! | AGGCCAGACCTTTTCACTGG+AGG | + | chr4.4:5017939-5017958 | MS.gene89699:CDS | 55.0% |
! | CGAAGGCCAGACCTTTTCAC+TGG | + | chr4.4:5017936-5017955 | MS.gene89699:CDS | 55.0% |
! | GACGGGCTCACGACAAAACA+AGG | + | chr4.4:5018263-5018282 | MS.gene89699:CDS | 55.0% |
! | TTGGGGAGCATGAAGCCATG+CGG | + | chr4.4:5018210-5018229 | MS.gene89699:CDS | 55.0% |
CTCACCCATTCCAGCTCCCT+CGG | - | chr4.4:5019623-5019642 | None:intergenic | 60.0% | |
GCAGCACTTTCAGCAGGAGG+AGG | - | chr4.4:5017458-5017477 | None:intergenic | 60.0% | |
GCTGCAAGCTTCTCTGCCGA+GGG | + | chr4.4:5019604-5019623 | MS.gene89699:CDS | 60.0% | |
GGACTTTCCGCCTTCACTGC+TGG | - | chr4.4:5017437-5017456 | None:intergenic | 60.0% | |
GGAGCAGCACTTTCAGCAGG+AGG | - | chr4.4:5017461-5017480 | None:intergenic | 60.0% | |
TCTGCCGAGGGAGCTGGAAT+GGG | + | chr4.4:5019616-5019635 | MS.gene89699:CDS | 60.0% | |
TGCTGCAAGCTTCTCTGCCG+AGG | + | chr4.4:5019603-5019622 | MS.gene89699:CDS | 60.0% | |
TGTCGTGAGCCCGTCCCAAT+GGG | - | chr4.4:5018258-5018277 | None:intergenic | 60.0% | |
TTGTCGTGAGCCCGTCCCAA+TGG | - | chr4.4:5018259-5018278 | None:intergenic | 60.0% | |
AGCTTCTCTGCCGAGGGAGC+TGG | + | chr4.4:5019610-5019629 | MS.gene89699:CDS | 65.0% | |
CTCTGCCGAGGGAGCTGGAA+TGG | + | chr4.4:5019615-5019634 | MS.gene89699:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 5016732 | 5019714 | 5016732 | ID=MS.gene89699 |
chr4.4 | mRNA | 5016732 | 5019714 | 5016732 | ID=MS.gene89699.t1;Parent=MS.gene89699 |
chr4.4 | exon | 5016732 | 5017126 | 5016732 | ID=MS.gene89699.t1.exon1;Parent=MS.gene89699.t1 |
chr4.4 | CDS | 5016732 | 5017126 | 5016732 | ID=cds.MS.gene89699.t1;Parent=MS.gene89699.t1 |
chr4.4 | exon | 5017211 | 5017298 | 5017211 | ID=MS.gene89699.t1.exon2;Parent=MS.gene89699.t1 |
chr4.4 | CDS | 5017211 | 5017298 | 5017211 | ID=cds.MS.gene89699.t1;Parent=MS.gene89699.t1 |
chr4.4 | exon | 5017404 | 5017562 | 5017404 | ID=MS.gene89699.t1.exon3;Parent=MS.gene89699.t1 |
chr4.4 | CDS | 5017404 | 5017562 | 5017404 | ID=cds.MS.gene89699.t1;Parent=MS.gene89699.t1 |
chr4.4 | exon | 5017795 | 5018363 | 5017795 | ID=MS.gene89699.t1.exon4;Parent=MS.gene89699.t1 |
chr4.4 | CDS | 5017795 | 5018363 | 5017795 | ID=cds.MS.gene89699.t1;Parent=MS.gene89699.t1 |
chr4.4 | exon | 5018838 | 5018976 | 5018838 | ID=MS.gene89699.t1.exon5;Parent=MS.gene89699.t1 |
chr4.4 | CDS | 5018838 | 5018976 | 5018838 | ID=cds.MS.gene89699.t1;Parent=MS.gene89699.t1 |
chr4.4 | exon | 5019273 | 5019341 | 5019273 | ID=MS.gene89699.t1.exon6;Parent=MS.gene89699.t1 |
chr4.4 | CDS | 5019273 | 5019341 | 5019273 | ID=cds.MS.gene89699.t1;Parent=MS.gene89699.t1 |
chr4.4 | exon | 5019439 | 5019714 | 5019439 | ID=MS.gene89699.t1.exon7;Parent=MS.gene89699.t1 |
chr4.4 | CDS | 5019439 | 5019714 | 5019439 | ID=cds.MS.gene89699.t1;Parent=MS.gene89699.t1 |
Gene Sequence |
Protein sequence |