Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06026.t1 | XP_013447134.1 | 97.4 | 784 | 18 | 1 | 23 | 804 | 77 | 860 | 0.00E+00 | 1393.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06026.t1 | Q6NW58 | 51.0 | 247 | 117 | 4 | 459 | 704 | 274 | 517 | 1.4e-62 | 242.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06026.t1 | A0A072TVF1 | 97.4 | 784 | 18 | 1 | 23 | 804 | 77 | 860 | 0.0e+00 | 1393.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene06026 | MS.gene072976 | 0.802622 | 5.14E-49 | -1.69E-46 |
MS.gene06026 | MS.gene55758 | 0.996429 | 2.04E-227 | -1.69E-46 |
MS.gene06026 | MS.gene75436 | -0.830799 | 2.40E-55 | -1.69E-46 |
MS.gene06026 | MS.gene78717 | -0.804809 | 1.81E-49 | -1.69E-46 |
MS.gene06026 | MS.gene89699 | 0.863973 | 1.70E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06026.t1 | MTR_8g099065 | 97.449 | 784 | 18 | 1 | 23 | 804 | 77 | 860 | 0.0 | 1570 |
MS.gene06026.t1 | MTR_8g099065 | 96.645 | 626 | 19 | 1 | 23 | 646 | 77 | 702 | 0.0 | 1244 |
MS.gene06026.t1 | MTR_5g009840 | 77.494 | 782 | 155 | 7 | 23 | 804 | 72 | 832 | 0.0 | 1196 |
MS.gene06026.t1 | MTR_6g033740 | 65.345 | 782 | 230 | 9 | 23 | 804 | 73 | 813 | 0.0 | 991 |
MS.gene06026.t1 | MTR_1g099480 | 52.551 | 784 | 278 | 10 | 23 | 804 | 94 | 785 | 0.0 | 760 |
MS.gene06026.t1 | MTR_1g099480 | 51.364 | 623 | 221 | 6 | 23 | 644 | 94 | 635 | 0.0 | 597 |
MS.gene06026.t1 | MTR_3g089100 | 42.284 | 648 | 250 | 9 | 197 | 804 | 639 | 1202 | 2.79e-160 | 498 |
MS.gene06026.t1 | MTR_3g089100 | 51.515 | 66 | 30 | 1 | 23 | 86 | 402 | 467 | 6.07e-12 | 70.1 |
MS.gene06026.t1 | MTR_3g089100 | 42.284 | 648 | 250 | 9 | 197 | 804 | 644 | 1207 | 3.22e-160 | 498 |
MS.gene06026.t1 | MTR_3g089100 | 51.515 | 66 | 30 | 1 | 23 | 86 | 407 | 472 | 6.24e-12 | 70.1 |
MS.gene06026.t1 | MTR_3g089100 | 42.284 | 648 | 250 | 9 | 197 | 804 | 673 | 1236 | 5.38e-160 | 498 |
MS.gene06026.t1 | MTR_3g089100 | 51.515 | 66 | 30 | 1 | 23 | 86 | 436 | 501 | 5.97e-12 | 70.1 |
MS.gene06026.t1 | MTR_1g088730 | 40.678 | 649 | 256 | 8 | 198 | 804 | 676 | 1237 | 1.04e-152 | 478 |
MS.gene06026.t1 | MTR_1g088730 | 33.548 | 155 | 84 | 4 | 23 | 171 | 439 | 580 | 1.09e-11 | 69.3 |
MS.gene06026.t1 | MTR_1g099470 | 66.667 | 351 | 103 | 6 | 456 | 804 | 412 | 750 | 7.01e-152 | 462 |
MS.gene06026.t1 | MTR_1g099470 | 46.092 | 371 | 159 | 7 | 24 | 390 | 68 | 401 | 7.20e-96 | 315 |
MS.gene06026.t1 | MTR_1g101870 | 65.616 | 349 | 107 | 5 | 458 | 804 | 485 | 822 | 4.21e-147 | 452 |
MS.gene06026.t1 | MTR_1g101870 | 65.616 | 349 | 107 | 5 | 458 | 804 | 537 | 874 | 1.49e-146 | 452 |
MS.gene06026.t1 | MTR_1g088750 | 59.605 | 354 | 114 | 3 | 455 | 804 | 866 | 1194 | 9.84e-137 | 435 |
MS.gene06026.t1 | MTR_1g088750 | 25.893 | 224 | 125 | 4 | 196 | 381 | 631 | 851 | 1.19e-18 | 92.0 |
MS.gene06026.t1 | MTR_1g088750 | 59.605 | 354 | 114 | 3 | 455 | 804 | 915 | 1243 | 1.69e-136 | 436 |
MS.gene06026.t1 | MTR_1g088750 | 25.893 | 224 | 125 | 4 | 196 | 381 | 680 | 900 | 1.33e-18 | 91.7 |
MS.gene06026.t1 | MTR_4g074920 | 46.221 | 344 | 133 | 3 | 460 | 802 | 651 | 943 | 3.61e-94 | 315 |
MS.gene06026.t1 | MTR_3g092070 | 55.777 | 251 | 109 | 2 | 460 | 709 | 63 | 312 | 1.53e-90 | 288 |
MS.gene06026.t1 | MTR_3g092080 | 56.175 | 251 | 108 | 2 | 460 | 709 | 66 | 315 | 1.87e-90 | 290 |
MS.gene06026.t1 | MTR_3g092080 | 56.175 | 251 | 108 | 2 | 460 | 709 | 66 | 315 | 2.57e-90 | 289 |
MS.gene06026.t1 | MTR_3g092070 | 55.777 | 251 | 109 | 2 | 460 | 709 | 63 | 312 | 4.31e-90 | 289 |
MS.gene06026.t1 | MTR_6g023875 | 40.805 | 348 | 150 | 10 | 458 | 790 | 352 | 658 | 2.19e-69 | 242 |
MS.gene06026.t1 | MTR_6g023855 | 40.517 | 348 | 152 | 11 | 458 | 790 | 216 | 523 | 3.99e-68 | 235 |
MS.gene06026.t1 | MTR_4g011810 | 41.438 | 292 | 161 | 5 | 422 | 705 | 185 | 474 | 5.69e-63 | 221 |
MS.gene06026.t1 | MTR_7g075520 | 47.807 | 228 | 116 | 3 | 478 | 704 | 212 | 437 | 2.69e-62 | 218 |
MS.gene06026.t1 | MTR_4g096870 | 44.030 | 268 | 139 | 5 | 445 | 707 | 86 | 347 | 1.03e-60 | 211 |
MS.gene06026.t1 | MTR_6g023865 | 37.222 | 360 | 158 | 11 | 458 | 789 | 128 | 447 | 9.06e-58 | 205 |
MS.gene06026.t1 | MTR_2g086160 | 44.545 | 220 | 118 | 4 | 477 | 695 | 131 | 347 | 5.41e-57 | 199 |
MS.gene06026.t1 | MTR_2g086160 | 43.860 | 228 | 125 | 3 | 477 | 703 | 131 | 356 | 5.75e-57 | 202 |
MS.gene06026.t1 | MTR_4g053350 | 44.737 | 228 | 123 | 3 | 477 | 703 | 126 | 351 | 7.44e-57 | 201 |
MS.gene06026.t1 | MTR_4g053350 | 44.737 | 228 | 123 | 3 | 477 | 703 | 126 | 351 | 7.53e-57 | 201 |
MS.gene06026.t1 | MTR_1g063380 | 39.916 | 238 | 138 | 3 | 477 | 712 | 204 | 438 | 4.56e-47 | 180 |
MS.gene06026.t1 | MTR_1g063380 | 34.572 | 269 | 162 | 6 | 477 | 741 | 477 | 735 | 2.16e-46 | 178 |
MS.gene06026.t1 | MTR_7g101870 | 36.992 | 246 | 145 | 5 | 477 | 718 | 478 | 717 | 6.49e-47 | 180 |
MS.gene06026.t1 | MTR_7g101870 | 39.669 | 242 | 140 | 4 | 474 | 712 | 201 | 439 | 1.18e-46 | 179 |
MS.gene06026.t1 | MTR_6g023845 | 35.077 | 325 | 139 | 9 | 473 | 790 | 106 | 365 | 6.44e-46 | 169 |
MS.gene06026.t1 | MTR_2g095210 | 36.585 | 246 | 146 | 5 | 477 | 718 | 405 | 644 | 6.54e-46 | 176 |
MS.gene06026.t1 | MTR_2g095210 | 41.739 | 115 | 57 | 2 | 450 | 558 | 177 | 287 | 1.13e-14 | 78.6 |
MS.gene06026.t1 | MTR_7g089040 | 38.400 | 250 | 142 | 4 | 464 | 703 | 664 | 911 | 3.25e-44 | 172 |
MS.gene06026.t1 | MTR_7g089040 | 27.299 | 348 | 233 | 9 | 456 | 797 | 366 | 699 | 2.02e-29 | 126 |
MS.gene06026.t1 | MTR_7g088830 | 35.606 | 264 | 160 | 4 | 478 | 733 | 658 | 919 | 6.57e-44 | 171 |
MS.gene06026.t1 | MTR_7g088830 | 38.172 | 186 | 105 | 6 | 517 | 698 | 432 | 611 | 1.30e-28 | 123 |
MS.gene06026.t1 | MTR_2g095320 | 33.445 | 299 | 162 | 7 | 477 | 773 | 420 | 683 | 9.06e-44 | 169 |
MS.gene06026.t1 | MTR_2g095320 | 37.815 | 238 | 139 | 4 | 477 | 712 | 152 | 382 | 8.86e-42 | 164 |
MS.gene06026.t1 | MTR_3g117230 | 36.220 | 254 | 150 | 5 | 477 | 721 | 138 | 388 | 2.94e-43 | 162 |
MS.gene06026.t1 | MTR_3g104480 | 41.200 | 250 | 137 | 6 | 469 | 714 | 213 | 456 | 4.36e-43 | 167 |
MS.gene06026.t1 | MTR_7g010800 | 39.834 | 241 | 138 | 5 | 478 | 714 | 206 | 443 | 8.49e-43 | 166 |
MS.gene06026.t1 | MTR_3g112260 | 35.827 | 254 | 151 | 5 | 477 | 721 | 135 | 385 | 1.07e-42 | 160 |
MS.gene06026.t1 | MTR_3g104470 | 40.400 | 250 | 139 | 6 | 469 | 714 | 215 | 458 | 1.29e-42 | 166 |
MS.gene06026.t1 | MTR_3g115110 | 36.131 | 274 | 164 | 5 | 475 | 740 | 246 | 516 | 4.85e-41 | 161 |
MS.gene06026.t1 | MTR_4g094270 | 36.910 | 233 | 138 | 5 | 477 | 703 | 155 | 384 | 1.39e-40 | 155 |
MS.gene06026.t1 | MTR_7g088850 | 37.288 | 236 | 142 | 3 | 478 | 709 | 282 | 515 | 3.39e-40 | 157 |
MS.gene06026.t1 | MTR_7g088850 | 29.952 | 207 | 135 | 5 | 503 | 702 | 38 | 241 | 1.09e-15 | 81.3 |
MS.gene06026.t1 | MTR_3g062510 | 35.498 | 231 | 143 | 3 | 477 | 703 | 158 | 386 | 3.47e-39 | 150 |
MS.gene06026.t1 | MTR_1g069105 | 35.217 | 230 | 141 | 4 | 479 | 703 | 189 | 415 | 3.50e-39 | 151 |
MS.gene06026.t1 | MTR_7g099640 | 35.217 | 230 | 141 | 4 | 479 | 703 | 188 | 414 | 4.32e-39 | 150 |
MS.gene06026.t1 | MTR_7g099640 | 35.217 | 230 | 141 | 4 | 479 | 703 | 188 | 414 | 5.52e-39 | 150 |
MS.gene06026.t1 | MTR_3g462930 | 41.667 | 228 | 121 | 6 | 478 | 697 | 304 | 527 | 1.10e-38 | 154 |
MS.gene06026.t1 | MTR_4g094662 | 39.286 | 224 | 129 | 5 | 478 | 697 | 229 | 449 | 1.53e-38 | 153 |
MS.gene06026.t1 | MTR_1g095660 | 35.385 | 260 | 155 | 6 | 477 | 725 | 117 | 374 | 1.57e-38 | 148 |
MS.gene06026.t1 | MTR_1g083330 | 35.683 | 227 | 140 | 3 | 480 | 702 | 169 | 393 | 1.83e-38 | 149 |
MS.gene06026.t1 | MTR_4g033235 | 34.263 | 251 | 150 | 5 | 460 | 702 | 151 | 394 | 1.89e-38 | 149 |
MS.gene06026.t1 | MTR_2g438140 | 39.286 | 224 | 129 | 5 | 478 | 697 | 226 | 446 | 2.25e-38 | 153 |
MS.gene06026.t1 | MTR_5g069780 | 40.088 | 227 | 126 | 5 | 478 | 697 | 313 | 536 | 3.28e-38 | 153 |
MS.gene06026.t1 | MTR_5g075340 | 37.255 | 255 | 150 | 6 | 464 | 714 | 215 | 463 | 4.09e-38 | 153 |
MS.gene06026.t1 | MTR_2g438140 | 39.286 | 224 | 129 | 5 | 478 | 697 | 286 | 506 | 4.34e-38 | 152 |
MS.gene06026.t1 | MTR_7g089290 | 37.004 | 227 | 136 | 6 | 477 | 698 | 638 | 862 | 7.21e-38 | 152 |
MS.gene06026.t1 | MTR_7g089290 | 37.004 | 227 | 136 | 6 | 477 | 698 | 666 | 890 | 7.42e-38 | 152 |
MS.gene06026.t1 | MTR_7g078570 | 37.931 | 232 | 134 | 5 | 478 | 702 | 192 | 420 | 1.60e-37 | 150 |
MS.gene06026.t1 | MTR_4g064350 | 36.638 | 232 | 137 | 5 | 478 | 702 | 320 | 548 | 1.84e-36 | 148 |
MS.gene06026.t1 | MTR_0376s0020 | 36.364 | 231 | 138 | 5 | 478 | 702 | 1 | 228 | 2.18e-36 | 145 |
MS.gene06026.t1 | MTR_2g007010 | 33.754 | 317 | 183 | 9 | 480 | 790 | 240 | 535 | 2.54e-36 | 147 |
MS.gene06026.t1 | MTR_2g007010 | 33.482 | 224 | 142 | 4 | 477 | 696 | 527 | 747 | 7.84e-35 | 142 |
MS.gene06026.t1 | MTR_4g067100 | 38.655 | 238 | 135 | 5 | 478 | 707 | 380 | 614 | 3.19e-36 | 148 |
MS.gene06026.t1 | MTR_4g067100 | 38.655 | 238 | 135 | 5 | 478 | 707 | 380 | 614 | 3.22e-36 | 148 |
MS.gene06026.t1 | MTR_1g028390 | 38.934 | 244 | 137 | 7 | 464 | 703 | 316 | 551 | 3.67e-36 | 147 |
MS.gene06026.t1 | MTR_6g016600 | 39.301 | 229 | 131 | 5 | 478 | 702 | 317 | 541 | 5.12e-36 | 145 |
MS.gene06026.t1 | MTR_7g096060 | 36.638 | 232 | 137 | 5 | 478 | 702 | 240 | 468 | 5.50e-36 | 145 |
MS.gene06026.t1 | MTR_6g059690 | 35.776 | 232 | 139 | 5 | 478 | 702 | 197 | 425 | 2.33e-34 | 140 |
MS.gene06026.t1 | MTR_7g088980 | 35.146 | 239 | 149 | 3 | 478 | 712 | 136 | 372 | 7.88e-34 | 135 |
MS.gene06026.t1 | MTR_3g023900 | 32.083 | 240 | 140 | 6 | 477 | 696 | 530 | 766 | 8.99e-34 | 139 |
MS.gene06026.t1 | MTR_3g023900 | 30.721 | 319 | 193 | 7 | 480 | 788 | 236 | 536 | 4.77e-30 | 127 |
MS.gene06026.t1 | MTR_5g075360 | 38.494 | 239 | 137 | 6 | 469 | 703 | 7 | 239 | 9.43e-34 | 136 |
MS.gene06026.t1 | MTR_3g062510 | 41.176 | 187 | 102 | 4 | 477 | 659 | 158 | 340 | 1.25e-33 | 133 |
MS.gene06026.t1 | MTR_7g088980 | 35.146 | 239 | 149 | 3 | 478 | 712 | 218 | 454 | 2.58e-33 | 135 |
MS.gene06026.t1 | MTR_7g088980 | 31.013 | 158 | 99 | 5 | 546 | 696 | 17 | 171 | 2.68e-11 | 67.4 |
MS.gene06026.t1 | MTR_5g075360 | 38.494 | 239 | 137 | 6 | 469 | 703 | 183 | 415 | 2.62e-33 | 137 |
MS.gene06026.t1 | MTR_5g075360 | 38.494 | 239 | 137 | 6 | 469 | 703 | 57 | 289 | 2.86e-33 | 135 |
MS.gene06026.t1 | MTR_5g075360 | 38.494 | 239 | 137 | 6 | 469 | 703 | 233 | 465 | 4.17e-33 | 137 |
MS.gene06026.t1 | MTR_7g088980 | 35.146 | 239 | 149 | 3 | 478 | 712 | 286 | 522 | 5.08e-33 | 135 |
MS.gene06026.t1 | MTR_7g088980 | 34.513 | 226 | 128 | 8 | 483 | 696 | 22 | 239 | 5.75e-25 | 110 |
MS.gene06026.t1 | MTR_2g101290 | 31.313 | 297 | 177 | 9 | 476 | 761 | 413 | 693 | 5.08e-33 | 137 |
MS.gene06026.t1 | MTR_2g101290 | 31.313 | 297 | 177 | 9 | 476 | 761 | 413 | 693 | 7.03e-33 | 137 |
MS.gene06026.t1 | MTR_7g088980 | 35.146 | 239 | 149 | 3 | 478 | 712 | 312 | 548 | 1.00e-32 | 134 |
MS.gene06026.t1 | MTR_7g088980 | 35.638 | 188 | 111 | 5 | 516 | 696 | 81 | 265 | 1.14e-23 | 106 |
MS.gene06026.t1 | MTR_1g069105 | 37.234 | 188 | 110 | 4 | 479 | 661 | 189 | 373 | 5.81e-32 | 129 |
MS.gene06026.t1 | MTR_3g023890 | 34.016 | 244 | 132 | 7 | 477 | 696 | 384 | 622 | 3.00e-31 | 130 |
MS.gene06026.t1 | MTR_3g023890 | 31.333 | 300 | 169 | 8 | 501 | 788 | 116 | 390 | 1.38e-28 | 122 |
MS.gene06026.t1 | MTR_2g024440 | 32.296 | 257 | 151 | 8 | 469 | 712 | 205 | 451 | 1.86e-30 | 126 |
MS.gene06026.t1 | MTR_2g024440 | 32.031 | 256 | 153 | 7 | 469 | 712 | 287 | 533 | 5.99e-30 | 126 |
MS.gene06026.t1 | MTR_2g024440 | 32.258 | 248 | 147 | 7 | 477 | 712 | 296 | 534 | 6.26e-30 | 126 |
MS.gene06026.t1 | MTR_2g078630 | 32.271 | 251 | 154 | 7 | 480 | 719 | 68 | 313 | 8.37e-30 | 127 |
MS.gene06026.t1 | MTR_8g099605 | 34.034 | 238 | 142 | 4 | 478 | 703 | 404 | 638 | 1.14e-29 | 127 |
MS.gene06026.t1 | MTR_8g023550 | 32.174 | 230 | 135 | 4 | 477 | 702 | 164 | 376 | 1.20e-29 | 122 |
MS.gene06026.t1 | MTR_3g096000 | 32.895 | 304 | 180 | 10 | 449 | 732 | 262 | 561 | 1.46e-29 | 126 |
MS.gene06026.t1 | MTR_8g056860 | 32.576 | 264 | 140 | 8 | 483 | 716 | 462 | 717 | 1.67e-29 | 126 |
MS.gene06026.t1 | MTR_8g099605 | 34.034 | 238 | 142 | 4 | 478 | 703 | 163 | 397 | 1.90e-29 | 125 |
MS.gene06026.t1 | MTR_8g469460 | 33.333 | 270 | 142 | 8 | 472 | 737 | 201 | 436 | 3.05e-29 | 124 |
MS.gene06026.t1 | MTR_2g078630 | 32.271 | 251 | 154 | 7 | 480 | 719 | 596 | 841 | 3.12e-29 | 126 |
MS.gene06026.t1 | MTR_3g104490 | 35.510 | 245 | 130 | 7 | 472 | 714 | 201 | 419 | 3.31e-29 | 124 |
MS.gene06026.t1 | MTR_5g074850 | 33.083 | 266 | 154 | 9 | 464 | 714 | 484 | 740 | 1.88e-27 | 119 |
MS.gene06026.t1 | MTR_7g088980 | 34.513 | 226 | 128 | 8 | 483 | 696 | 22 | 239 | 3.50e-25 | 110 |
MS.gene06026.t1 | MTR_7g088980 | 32.068 | 237 | 116 | 6 | 478 | 712 | 286 | 479 | 1.48e-20 | 96.7 |
MS.gene06026.t1 | MTR_7g088980 | 35.638 | 188 | 111 | 5 | 516 | 696 | 81 | 265 | 6.34e-24 | 107 |
MS.gene06026.t1 | MTR_7g088980 | 32.068 | 237 | 116 | 6 | 478 | 712 | 312 | 505 | 2.13e-20 | 96.3 |
MS.gene06026.t1 | MTR_1g101880 | 44.286 | 140 | 38 | 3 | 619 | 758 | 154 | 253 | 5.58e-23 | 99.8 |
MS.gene06026.t1 | MTR_4g088885 | 33.036 | 224 | 121 | 9 | 512 | 715 | 257 | 471 | 9.10e-20 | 95.1 |
MS.gene06026.t1 | MTR_1g044600 | 34.839 | 155 | 92 | 4 | 555 | 702 | 204 | 356 | 1.24e-19 | 93.6 |
MS.gene06026.t1 | MTR_1g080430 | 33.333 | 234 | 128 | 11 | 461 | 681 | 667 | 885 | 1.97e-18 | 91.3 |
MS.gene06026.t1 | MTR_1g080430 | 33.333 | 234 | 128 | 11 | 461 | 681 | 667 | 885 | 2.19e-18 | 90.9 |
MS.gene06026.t1 | MTR_3g083210 | 46.739 | 92 | 33 | 3 | 494 | 584 | 8 | 84 | 1.46e-16 | 75.9 |
MS.gene06026.t1 | MTR_6g005760 | 28.502 | 207 | 118 | 5 | 514 | 695 | 362 | 563 | 8.15e-16 | 82.0 |
MS.gene06026.t1 | MTR_4g077880 | 32.680 | 153 | 97 | 3 | 514 | 665 | 368 | 515 | 8.52e-16 | 82.0 |
MS.gene06026.t1 | MTR_6g005760 | 28.502 | 207 | 118 | 5 | 514 | 695 | 234 | 435 | 8.85e-16 | 81.3 |
MS.gene06026.t1 | MTR_4g083460 | 24.590 | 244 | 127 | 6 | 480 | 705 | 839 | 1043 | 1.74e-14 | 78.2 |
MS.gene06026.t1 | MTR_4g112600 | 44.872 | 78 | 42 | 1 | 482 | 558 | 4 | 81 | 2.52e-14 | 69.3 |
MS.gene06026.t1 | MTR_5g020530 | 34.028 | 144 | 87 | 4 | 514 | 655 | 387 | 524 | 2.75e-14 | 77.0 |
MS.gene06026.t1 | MTR_3g076930 | 29.697 | 165 | 97 | 4 | 516 | 663 | 197 | 359 | 1.72e-12 | 70.9 |
MS.gene06026.t1 | MTR_7g026640 | 80.000 | 35 | 7 | 0 | 308 | 342 | 6 | 40 | 1.96e-11 | 60.5 |
MS.gene06026.t1 | MTR_8g469440 | 50.000 | 78 | 34 | 3 | 469 | 544 | 198 | 272 | 2.99e-11 | 65.9 |
MS.gene06026.t1 | MTR_1g101900 | 56.098 | 41 | 18 | 0 | 758 | 798 | 1 | 41 | 6.29e-11 | 60.8 |
MS.gene06026.t1 | MTR_3g115110 | 45.946 | 74 | 39 | 1 | 475 | 548 | 246 | 318 | 7.16e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06026.t1 | AT1G64110 | 72.392 | 786 | 183 | 8 | 23 | 804 | 69 | 824 | 0.0 | 1134 |
MS.gene06026.t1 | AT1G64110 | 72.392 | 786 | 183 | 8 | 23 | 804 | 74 | 829 | 0.0 | 1133 |
MS.gene06026.t1 | AT1G64110 | 72.392 | 786 | 183 | 8 | 23 | 804 | 74 | 829 | 0.0 | 1133 |
MS.gene06026.t1 | AT1G64110 | 72.392 | 786 | 181 | 8 | 23 | 804 | 74 | 827 | 0.0 | 1132 |
MS.gene06026.t1 | AT1G64110 | 72.392 | 786 | 181 | 8 | 23 | 804 | 74 | 827 | 0.0 | 1132 |
MS.gene06026.t1 | AT4G28000 | 67.136 | 782 | 234 | 9 | 23 | 804 | 72 | 830 | 0.0 | 1049 |
MS.gene06026.t1 | AT4G28000 | 66.794 | 783 | 237 | 9 | 23 | 804 | 72 | 832 | 0.0 | 1045 |
MS.gene06026.t1 | AT5G52882 | 67.433 | 783 | 229 | 9 | 23 | 804 | 72 | 829 | 0.0 | 1014 |
MS.gene06026.t1 | AT4G28000 | 65.997 | 747 | 231 | 9 | 23 | 768 | 72 | 796 | 0.0 | 979 |
MS.gene06026.t1 | AT4G02480 | 42.040 | 647 | 255 | 10 | 197 | 804 | 700 | 1265 | 7.66e-153 | 479 |
MS.gene06026.t1 | AT1G02890 | 59.375 | 352 | 118 | 4 | 455 | 804 | 918 | 1246 | 2.27e-134 | 430 |
MS.gene06026.t1 | AT1G02890 | 25.532 | 235 | 136 | 1 | 197 | 392 | 680 | 914 | 1.43e-22 | 104 |
MS.gene06026.t1 | AT4G24860 | 58.382 | 346 | 121 | 3 | 459 | 803 | 771 | 1094 | 3.80e-123 | 397 |
MS.gene06026.t1 | AT4G24860 | 28.358 | 201 | 125 | 3 | 198 | 381 | 557 | 755 | 5.65e-19 | 92.8 |
MS.gene06026.t1 | AT4G24860 | 57.345 | 354 | 128 | 3 | 451 | 803 | 786 | 1117 | 7.04e-123 | 397 |
MS.gene06026.t1 | AT4G24860 | 28.358 | 201 | 125 | 3 | 198 | 381 | 580 | 778 | 6.23e-19 | 92.8 |
MS.gene06026.t1 | AT4G24860 | 57.345 | 354 | 128 | 3 | 451 | 803 | 788 | 1119 | 7.78e-123 | 396 |
MS.gene06026.t1 | AT4G24860 | 28.571 | 210 | 132 | 4 | 198 | 392 | 584 | 790 | 4.82e-19 | 93.2 |
MS.gene06026.t1 | AT4G24860 | 57.345 | 354 | 128 | 3 | 451 | 803 | 790 | 1121 | 7.99e-123 | 396 |
MS.gene06026.t1 | AT4G24860 | 28.358 | 201 | 125 | 3 | 198 | 381 | 584 | 782 | 8.21e-19 | 92.4 |
MS.gene06026.t1 | AT1G50140 | 36.210 | 649 | 278 | 12 | 194 | 802 | 429 | 981 | 1.56e-119 | 384 |
MS.gene06026.t1 | AT1G50140 | 36.210 | 649 | 278 | 12 | 194 | 802 | 429 | 981 | 1.56e-119 | 384 |
MS.gene06026.t1 | AT1G50140 | 36.210 | 649 | 278 | 12 | 194 | 802 | 451 | 1003 | 2.07e-119 | 385 |
MS.gene06026.t1 | AT1G50140 | 36.210 | 649 | 278 | 12 | 194 | 802 | 451 | 1003 | 2.07e-119 | 385 |
MS.gene06026.t1 | AT1G50140 | 36.210 | 649 | 278 | 12 | 194 | 802 | 451 | 1003 | 2.07e-119 | 385 |
MS.gene06026.t1 | AT1G02890 | 53.977 | 352 | 109 | 5 | 455 | 804 | 918 | 1218 | 3.40e-112 | 370 |
MS.gene06026.t1 | AT1G02890 | 25.532 | 235 | 136 | 1 | 197 | 392 | 680 | 914 | 1.46e-22 | 104 |
MS.gene06026.t1 | AT3G19740 | 48.446 | 386 | 165 | 3 | 418 | 802 | 641 | 993 | 2.04e-110 | 360 |
MS.gene06026.t1 | AT1G62130 | 49.046 | 367 | 147 | 7 | 441 | 804 | 714 | 1043 | 9.99e-99 | 330 |
MS.gene06026.t1 | AT1G62130 | 28.302 | 159 | 113 | 1 | 198 | 356 | 540 | 697 | 3.03e-17 | 87.4 |
MS.gene06026.t1 | AT1G62130 | 49.046 | 367 | 147 | 7 | 441 | 804 | 707 | 1036 | 1.21e-98 | 330 |
MS.gene06026.t1 | AT1G62130 | 27.321 | 377 | 223 | 11 | 23 | 356 | 322 | 690 | 7.20e-25 | 112 |
MS.gene06026.t1 | AT4G27680 | 54.582 | 251 | 112 | 2 | 460 | 709 | 63 | 312 | 8.70e-88 | 283 |
MS.gene06026.t1 | AT5G53540 | 53.386 | 251 | 115 | 2 | 460 | 709 | 66 | 315 | 3.24e-87 | 282 |
MS.gene06026.t1 | AT2G45500 | 41.695 | 295 | 149 | 8 | 437 | 713 | 31 | 320 | 1.03e-64 | 220 |
MS.gene06026.t1 | AT2G45500 | 41.695 | 295 | 149 | 8 | 437 | 713 | 31 | 320 | 1.03e-64 | 220 |
MS.gene06026.t1 | AT2G45500 | 41.695 | 295 | 149 | 8 | 437 | 713 | 164 | 453 | 1.75e-63 | 221 |
MS.gene06026.t1 | AT2G45500 | 41.695 | 295 | 149 | 8 | 437 | 713 | 174 | 463 | 2.19e-63 | 221 |
MS.gene06026.t1 | AT2G45500 | 41.695 | 295 | 149 | 8 | 437 | 713 | 168 | 457 | 2.30e-63 | 221 |
MS.gene06026.t1 | AT3G27120 | 40.000 | 345 | 157 | 10 | 458 | 790 | 370 | 676 | 5.05e-63 | 224 |
MS.gene06026.t1 | AT1G80350 | 38.944 | 303 | 148 | 5 | 478 | 774 | 236 | 507 | 5.14e-61 | 215 |
MS.gene06026.t1 | AT2G34560 | 42.909 | 275 | 143 | 6 | 436 | 702 | 56 | 324 | 1.08e-60 | 210 |
MS.gene06026.t1 | AT2G34560 | 42.909 | 275 | 143 | 6 | 436 | 702 | 65 | 333 | 1.53e-60 | 210 |
MS.gene06026.t1 | AT2G27600 | 44.298 | 228 | 124 | 3 | 477 | 703 | 128 | 353 | 5.93e-56 | 199 |
MS.gene06026.t1 | AT3G53230 | 37.805 | 246 | 143 | 5 | 477 | 718 | 477 | 716 | 3.12e-47 | 181 |
MS.gene06026.t1 | AT3G53230 | 40.175 | 229 | 132 | 3 | 477 | 703 | 204 | 429 | 3.95e-46 | 177 |
MS.gene06026.t1 | AT3G09840 | 39.916 | 238 | 138 | 3 | 477 | 712 | 203 | 437 | 5.40e-47 | 180 |
MS.gene06026.t1 | AT3G09840 | 36.437 | 247 | 146 | 4 | 477 | 718 | 476 | 716 | 5.18e-45 | 174 |
MS.gene06026.t1 | AT5G03340 | 39.496 | 238 | 139 | 3 | 477 | 712 | 203 | 437 | 2.48e-46 | 178 |
MS.gene06026.t1 | AT5G03340 | 32.500 | 320 | 202 | 7 | 477 | 792 | 476 | 785 | 1.06e-45 | 176 |
MS.gene06026.t1 | AT2G26140 | 41.200 | 250 | 137 | 6 | 469 | 714 | 215 | 458 | 1.24e-43 | 169 |
MS.gene06026.t1 | AT1G45000 | 36.220 | 254 | 150 | 5 | 477 | 721 | 135 | 385 | 8.52e-43 | 160 |
MS.gene06026.t1 | AT3G56690 | 38.983 | 236 | 139 | 3 | 478 | 710 | 721 | 954 | 1.36e-42 | 167 |
MS.gene06026.t1 | AT3G56690 | 35.678 | 199 | 122 | 4 | 512 | 707 | 415 | 610 | 2.12e-32 | 135 |
MS.gene06026.t1 | AT5G43010 | 35.433 | 254 | 152 | 5 | 477 | 721 | 135 | 385 | 4.88e-42 | 159 |
MS.gene06026.t1 | AT1G53750 | 36.957 | 230 | 139 | 3 | 477 | 702 | 164 | 391 | 6.62e-42 | 159 |
MS.gene06026.t1 | AT1G50250 | 35.766 | 274 | 165 | 5 | 475 | 740 | 256 | 526 | 1.54e-40 | 160 |
MS.gene06026.t1 | AT5G42270 | 35.401 | 274 | 166 | 5 | 475 | 740 | 244 | 514 | 1.54e-40 | 159 |
MS.gene06026.t1 | AT4G29040 | 36.087 | 230 | 139 | 4 | 479 | 703 | 186 | 412 | 1.94e-40 | 155 |
MS.gene06026.t1 | AT5G19990 | 37.339 | 233 | 137 | 5 | 477 | 703 | 157 | 386 | 2.18e-40 | 154 |
MS.gene06026.t1 | AT5G19990 | 37.339 | 233 | 137 | 5 | 477 | 703 | 157 | 386 | 2.18e-40 | 154 |
MS.gene06026.t1 | AT5G20000 | 37.339 | 233 | 137 | 5 | 477 | 703 | 157 | 386 | 2.42e-40 | 154 |
MS.gene06026.t1 | AT5G19990 | 37.339 | 233 | 137 | 5 | 477 | 703 | 99 | 328 | 2.59e-40 | 152 |
MS.gene06026.t1 | AT2G20140 | 36.087 | 230 | 139 | 4 | 479 | 703 | 186 | 412 | 3.38e-40 | 154 |
MS.gene06026.t1 | AT5G15250 | 38.174 | 241 | 142 | 5 | 478 | 714 | 221 | 458 | 4.71e-40 | 158 |
MS.gene06026.t1 | AT2G30950 | 38.430 | 242 | 139 | 6 | 478 | 712 | 228 | 466 | 2.90e-39 | 155 |
MS.gene06026.t1 | AT2G30950 | 38.430 | 242 | 139 | 6 | 478 | 712 | 224 | 462 | 3.31e-39 | 155 |
MS.gene06026.t1 | AT2G30950 | 38.430 | 242 | 139 | 6 | 478 | 712 | 224 | 462 | 3.31e-39 | 155 |
MS.gene06026.t1 | AT2G30950 | 38.430 | 242 | 139 | 6 | 478 | 712 | 224 | 462 | 3.31e-39 | 155 |
MS.gene06026.t1 | AT5G58290 | 35.498 | 231 | 143 | 3 | 477 | 703 | 151 | 379 | 3.58e-39 | 150 |
MS.gene06026.t1 | AT1G09100 | 34.263 | 251 | 150 | 5 | 460 | 702 | 150 | 393 | 1.75e-38 | 149 |
MS.gene06026.t1 | AT3G01610 | 31.269 | 323 | 190 | 8 | 479 | 790 | 231 | 532 | 2.45e-38 | 154 |
MS.gene06026.t1 | AT3G01610 | 34.615 | 234 | 142 | 5 | 477 | 705 | 524 | 751 | 9.45e-33 | 136 |
MS.gene06026.t1 | AT3G01610 | 31.269 | 323 | 190 | 8 | 479 | 790 | 231 | 532 | 2.45e-38 | 154 |
MS.gene06026.t1 | AT3G01610 | 34.615 | 234 | 142 | 5 | 477 | 705 | 524 | 751 | 8.87e-33 | 136 |
MS.gene06026.t1 | AT3G05530 | 34.263 | 251 | 150 | 5 | 460 | 702 | 151 | 394 | 2.70e-38 | 148 |
MS.gene06026.t1 | AT1G53780 | 36.000 | 225 | 138 | 3 | 477 | 697 | 336 | 558 | 3.80e-38 | 151 |
MS.gene06026.t1 | AT1G53780 | 36.000 | 225 | 138 | 3 | 477 | 697 | 336 | 558 | 3.80e-38 | 151 |
MS.gene06026.t1 | AT1G53780 | 36.000 | 225 | 138 | 3 | 477 | 697 | 335 | 557 | 3.87e-38 | 151 |
MS.gene06026.t1 | AT1G53780 | 36.000 | 225 | 138 | 3 | 477 | 697 | 357 | 579 | 4.62e-38 | 151 |
MS.gene06026.t1 | AT3G47060 | 39.207 | 227 | 128 | 5 | 478 | 697 | 322 | 545 | 1.02e-37 | 152 |
MS.gene06026.t1 | AT5G53170 | 39.344 | 244 | 136 | 7 | 464 | 703 | 346 | 581 | 1.72e-37 | 151 |
MS.gene06026.t1 | AT1G06430 | 38.839 | 224 | 130 | 5 | 478 | 697 | 217 | 437 | 2.00e-37 | 150 |
MS.gene06026.t1 | AT1G06430 | 38.839 | 224 | 130 | 5 | 478 | 697 | 217 | 437 | 2.00e-37 | 150 |
MS.gene06026.t1 | AT1G06430 | 38.839 | 224 | 130 | 5 | 478 | 697 | 217 | 437 | 2.00e-37 | 150 |
MS.gene06026.t1 | AT1G03000 | 34.298 | 242 | 152 | 6 | 477 | 713 | 654 | 893 | 2.96e-37 | 150 |
MS.gene06026.t1 | AT5G15250 | 34.848 | 264 | 142 | 6 | 478 | 714 | 221 | 481 | 8.35e-37 | 145 |
MS.gene06026.t1 | AT1G05910 | 38.494 | 239 | 136 | 5 | 477 | 707 | 377 | 612 | 1.05e-36 | 149 |
MS.gene06026.t1 | AT1G07510 | 37.004 | 227 | 133 | 5 | 478 | 697 | 324 | 547 | 2.00e-36 | 148 |
MS.gene06026.t1 | AT5G58870 | 37.885 | 227 | 131 | 5 | 478 | 697 | 326 | 549 | 7.79e-36 | 146 |
MS.gene06026.t1 | AT2G29080 | 36.207 | 232 | 139 | 5 | 478 | 703 | 319 | 547 | 3.51e-35 | 144 |
MS.gene06026.t1 | AT3G02450 | 37.118 | 229 | 136 | 5 | 478 | 702 | 331 | 555 | 3.42e-33 | 136 |
MS.gene06026.t1 | AT5G08470 | 32.900 | 231 | 150 | 3 | 480 | 708 | 843 | 1070 | 5.95e-33 | 137 |
MS.gene06026.t1 | AT5G08470 | 32.900 | 231 | 150 | 3 | 480 | 708 | 834 | 1061 | 6.62e-33 | 137 |
MS.gene06026.t1 | AT3G16290 | 34.728 | 239 | 135 | 7 | 476 | 703 | 405 | 633 | 7.17e-33 | 137 |
MS.gene06026.t1 | AT2G03670 | 35.379 | 277 | 150 | 5 | 478 | 744 | 283 | 540 | 7.41e-33 | 135 |
MS.gene06026.t1 | AT2G03670 | 35.043 | 234 | 141 | 6 | 471 | 696 | 12 | 242 | 3.97e-30 | 127 |
MS.gene06026.t1 | AT4G23940 | 34.538 | 249 | 148 | 4 | 478 | 714 | 427 | 672 | 3.90e-32 | 134 |
MS.gene06026.t1 | AT2G03670 | 35.043 | 234 | 141 | 6 | 471 | 696 | 12 | 242 | 5.18e-31 | 127 |
MS.gene06026.t1 | AT2G03670 | 38.194 | 144 | 76 | 2 | 478 | 613 | 283 | 421 | 3.95e-16 | 82.0 |
MS.gene06026.t1 | AT5G64580 | 34.672 | 274 | 160 | 8 | 467 | 725 | 301 | 570 | 1.05e-29 | 127 |
MS.gene06026.t1 | AT4G04180 | 29.474 | 285 | 176 | 8 | 477 | 748 | 310 | 582 | 3.79e-29 | 124 |
MS.gene06026.t1 | AT4G04180 | 30.739 | 257 | 153 | 8 | 477 | 720 | 315 | 559 | 4.69e-29 | 123 |
MS.gene06026.t1 | AT3G15120 | 31.855 | 248 | 149 | 7 | 465 | 697 | 708 | 950 | 6.48e-29 | 125 |
MS.gene06026.t1 | AT3G15120 | 31.855 | 248 | 149 | 7 | 465 | 697 | 698 | 940 | 6.98e-29 | 125 |
MS.gene06026.t1 | AT1G79560 | 30.418 | 263 | 147 | 7 | 483 | 716 | 482 | 737 | 6.41e-28 | 121 |
MS.gene06026.t1 | AT1G79560 | 30.418 | 263 | 147 | 7 | 483 | 716 | 482 | 737 | 6.66e-28 | 121 |
MS.gene06026.t1 | AT1G79560 | 30.418 | 263 | 147 | 7 | 483 | 716 | 482 | 737 | 6.99e-28 | 121 |
MS.gene06026.t1 | AT1G45000 | 40.000 | 140 | 80 | 2 | 477 | 613 | 135 | 273 | 1.01e-25 | 109 |
MS.gene06026.t1 | AT4G04910 | 33.476 | 233 | 123 | 10 | 512 | 724 | 247 | 467 | 1.05e-20 | 98.2 |
MS.gene06026.t1 | AT5G08470 | 31.757 | 148 | 98 | 2 | 480 | 627 | 843 | 987 | 1.51e-18 | 91.7 |
MS.gene06026.t1 | AT3G04340 | 30.435 | 230 | 134 | 9 | 464 | 681 | 774 | 989 | 3.41e-18 | 90.5 |
MS.gene06026.t1 | AT5G16930 | 28.846 | 208 | 117 | 5 | 514 | 695 | 397 | 599 | 2.58e-15 | 80.5 |
MS.gene06026.t1 | AT3G03060 | 29.327 | 208 | 116 | 5 | 514 | 695 | 385 | 587 | 6.84e-15 | 79.3 |
MS.gene06026.t1 | AT2G18330 | 32.168 | 143 | 91 | 3 | 514 | 655 | 384 | 521 | 4.04e-14 | 76.6 |
MS.gene06026.t1 | AT4G36580 | 31.469 | 143 | 92 | 3 | 514 | 655 | 381 | 518 | 6.94e-13 | 72.8 |
Find 167 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCCGAGGAATATTGTTATT+TGG | 0.127056 | 4.1:+5081922 | MS.gene06026:CDS |
GAGAAGCTATCTGACATATT+TGG | 0.138595 | 4.1:+5079450 | MS.gene06026:CDS |
TTCCATTGAATTTCCCTTTA+CGG | 0.223604 | 4.1:-5081179 | None:intergenic |
TCTGGACCAATTCTGATTCT+TGG | 0.270915 | 4.1:+5080693 | MS.gene06026:CDS |
ATGAATTTGAAAAGCGAATA+AGG | 0.281806 | 4.1:+5081758 | MS.gene06026:CDS |
GCTTGCAGCAACCTGATTCT+TGG | 0.290000 | 4.1:-5083547 | None:intergenic |
ACAAGATGTGATTCATCTTC+TGG | 0.292156 | 4.1:-5080804 | None:intergenic |
TGTCTACCATCACTTCTAAA+TGG | 0.295424 | 4.1:+5082022 | MS.gene06026:CDS |
GCCGAGGAATATTGTTATTT+GGG | 0.310498 | 4.1:+5081923 | MS.gene06026:CDS |
ATATACCGGAAGTGATTTAA+AGG | 0.314180 | 4.1:+5082910 | MS.gene06026:CDS |
CTGCAGATTCAGGGTAAATA+TGG | 0.314309 | 4.1:+5079260 | MS.gene06026:intron |
CTCTGCCGAGGGAGCTGGAA+TGG | 0.345392 | 4.1:+5083572 | MS.gene06026:CDS |
TGAGGCCAAGTTGCTTCTCT+TGG | 0.346585 | 4.1:+5079128 | MS.gene06026:CDS |
ACTTGGATGAAGCTATTATA+AGG | 0.347356 | 4.1:+5082274 | MS.gene06026:CDS |
TCATTTGCTGGTATGACTTC+AGG | 0.347511 | 4.1:-5081781 | None:intergenic |
GATTCAGCAAGAGAGGTTAA+AGG | 0.352811 | 4.1:+5083270 | MS.gene06026:CDS |
GATGTTACATTCTCTGATAT+TGG | 0.354632 | 4.1:+5081808 | MS.gene06026:CDS |
GGTTCGCGAGTTCTAGATTC+TGG | 0.357554 | 4.1:+5080714 | MS.gene06026:CDS |
ATCCAAGTCAAATGGCCTAT+TGG | 0.357867 | 4.1:-5082259 | None:intergenic |
TGTATGGAGAAGGTGGTTCT+AGG | 0.358234 | 4.1:+5083619 | MS.gene06026:CDS |
TTATTTGGGCCTCCTGGAAC+TGG | 0.359315 | 4.1:+5081937 | MS.gene06026:CDS |
TATGAAGATGATTCAAGTTC+AGG | 0.362767 | 4.1:+5080854 | MS.gene06026:CDS |
TCTATTGTAATGCAGAATTA+TGG | 0.369282 | 4.1:+5082778 | MS.gene06026:intron |
TTTCAAAGAGGCCAAGAATC+AGG | 0.374209 | 4.1:+5083536 | MS.gene06026:CDS |
ACAGGTGCTTGCCAAGGCTT+TGG | 0.374564 | 4.1:+5079095 | MS.gene06026:CDS |
AGAAGCTATCTGACATATTT+GGG | 0.377459 | 4.1:+5079451 | MS.gene06026:CDS |
TTCAAGAAACCTGGATTTGT+AGG | 0.381738 | 4.1:-5080043 | None:intergenic |
TGCTGAATCAACTCTCTAAC+TGG | 0.385985 | 4.1:-5083256 | None:intergenic |
GACTACCATCTGTTGAGAAC+AGG | 0.395163 | 4.1:+5082804 | MS.gene06026:CDS |
GAAGCATTCCTACGGAGCTT+TGG | 0.396052 | 4.1:-5079980 | None:intergenic |
CAGCTGGCTGTGCGCTTCAA+AGG | 0.397115 | 4.1:-5080388 | None:intergenic |
AGCTTCTCTGCCGAGGGAGC+TGG | 0.402753 | 4.1:+5083567 | MS.gene06026:CDS |
TGTGCACAACTGCTGCTTAT+CGG | 0.403241 | 4.1:+5083233 | MS.gene06026:CDS |
CTTTGAAGCGCACAGCCAGC+TGG | 0.404609 | 4.1:+5080389 | MS.gene06026:CDS |
CATCGACAAATATAATAGTT+GGG | 0.404747 | 4.1:-5082101 | None:intergenic |
CATTGTGTCTTCCACACATA+TGG | 0.406292 | 4.1:-5080940 | None:intergenic |
TATAATAGTTGGGGAGACTT+TGG | 0.410118 | 4.1:-5082091 | None:intergenic |
GGCTTTGGCTCATTACTTTG+AGG | 0.414743 | 4.1:+5079110 | MS.gene06026:CDS |
GTAACATCAATCTCATTTGC+TGG | 0.415172 | 4.1:-5081793 | None:intergenic |
ATTCTTCTCTCTGGCCCTGC+TGG | 0.415625 | 4.1:+5078375 | MS.gene06026:CDS |
TTGTTCTTGCAGCAACCAAT+AGG | 0.416450 | 4.1:+5082244 | MS.gene06026:CDS |
ACCATCACTTCTAAATGGTT+TGG | 0.418435 | 4.1:+5082027 | MS.gene06026:CDS |
ATTCAGGGTAAATATGGTTC+TGG | 0.421363 | 4.1:+5079266 | MS.gene06026:CDS |
AGCTAATTATTTCTTGCAAT+AGG | 0.423380 | 4.1:+5081051 | MS.gene06026:CDS |
TGTCAGCTGGAAGTCTCAAT+TGG | 0.424007 | 4.1:+5080824 | MS.gene06026:CDS |
TCATCGACAAATATAATAGT+TGG | 0.424477 | 4.1:-5082102 | None:intergenic |
GCTTTCCATTTCTGTATTCG+AGG | 0.424849 | 4.1:-5081031 | None:intergenic |
TGTCGTGAGCCCGTCCCAAT+GGG | 0.429515 | 4.1:-5082202 | None:intergenic |
ATATTGTTATTTGGGCCTCC+TGG | 0.432710 | 4.1:+5081931 | MS.gene06026:CDS |
TCTTAAAGAACTTTACCAAC+AGG | 0.435941 | 4.1:+5079077 | MS.gene06026:intron |
CATTGGGTATATTCCGTAAA+GGG | 0.437041 | 4.1:+5081166 | MS.gene06026:CDS |
TGCTCCAGCTTCCTTTGCAA+TGG | 0.438187 | 4.1:-5081980 | None:intergenic |
TTGGGCAACGAACAAGAGTT+GGG | 0.443792 | 4.1:+5082139 | MS.gene06026:CDS |
CCTTAGGCCATTGAATATGC+AGG | 0.449647 | 4.1:+5083512 | MS.gene06026:CDS |
GAATGAATTTATGTCCCATT+GGG | 0.450075 | 4.1:+5082188 | MS.gene06026:CDS |
CGCGAACCAAGAATCAGAAT+TGG | 0.451265 | 4.1:-5080699 | None:intergenic |
TTGAAATCCTGCATATTCAA+TGG | 0.451870 | 4.1:-5083519 | None:intergenic |
AAAATGTTGAAGAGACTCTC+TGG | 0.452650 | 4.1:+5080675 | MS.gene06026:CDS |
AGCAGAACTATTCTTCTCTC+TGG | 0.452668 | 4.1:+5078366 | MS.gene06026:CDS |
GGACTTTCCGCCTTCACTGC+TGG | 0.453814 | 4.1:-5081381 | None:intergenic |
ATCCACTTCAGAATCAACTT+TGG | 0.459722 | 4.1:+5079428 | MS.gene06026:CDS |
AAATAGTCAAGAAGCAAAAG+AGG | 0.463105 | 4.1:+5083461 | MS.gene06026:CDS |
CAAAGCAATCCTACAAATCC+AGG | 0.463996 | 4.1:+5080034 | MS.gene06026:CDS |
TCCCTCAGATATAGCACAAT+GGG | 0.464493 | 4.1:-5080603 | None:intergenic |
AACAGTTTGTCACATGCATT+GGG | 0.467253 | 4.1:+5081150 | MS.gene06026:intron |
TGCTGCAAGCTTCTCTGCCG+AGG | 0.467858 | 4.1:+5083560 | MS.gene06026:CDS |
TTCCGTAAAGGGAAATTCAA+TGG | 0.468198 | 4.1:+5081177 | MS.gene06026:CDS |
TCTGCCGAGGGAGCTGGAAT+GGG | 0.470640 | 4.1:+5083573 | MS.gene06026:CDS |
AAAGACCTCGAATACAGAAA+TGG | 0.472233 | 4.1:+5081026 | MS.gene06026:CDS |
AACCAATAGGCCATTTGACT+TGG | 0.473055 | 4.1:+5082257 | MS.gene06026:CDS |
AAGGCCATTGCAAAGGAAGC+TGG | 0.473597 | 4.1:+5081976 | MS.gene06026:CDS |
TTGTCGTGAGCCCGTCCCAA+TGG | 0.476108 | 4.1:-5082203 | None:intergenic |
TAAGAAACAGAAAGCTACTA+AGG | 0.476792 | 4.1:+5083398 | MS.gene06026:CDS |
CTATGATTGCTGCAGATTCA+GGG | 0.479630 | 4.1:+5079251 | MS.gene06026:intron |
TTAGAAGTCCTCCAGTGAAA+AGG | 0.480190 | 4.1:-5081894 | None:intergenic |
GCATTCCTACGGAGCTTTGG+AGG | 0.482889 | 4.1:-5079977 | None:intergenic |
TGATCTTGATTGCGATGACT+TGG | 0.483110 | 4.1:+5080914 | MS.gene06026:CDS |
TATATCTGAGGGATGTTGAT+AGG | 0.484831 | 4.1:+5080613 | MS.gene06026:CDS |
GTCATCGCAATCAAGATCAT+TGG | 0.485493 | 4.1:-5080910 | None:intergenic |
CTCACCCATTCCAGCTCCCT+CGG | 0.486104 | 4.1:-5083577 | None:intergenic |
GGTCTGATTTCTATATCGTA+TGG | 0.490528 | 4.1:-5080780 | None:intergenic |
TCTTCTACTTCAAATATTAG+CGG | 0.491615 | 4.1:+5080001 | MS.gene06026:CDS |
CCTGCATATTCAATGGCCTA+AGG | 0.491903 | 4.1:-5083512 | None:intergenic |
CTTGGGCAACGAACAAGAGT+TGG | 0.492617 | 4.1:+5082138 | MS.gene06026:CDS |
ATGCTTAGACTTATTGTTGA+CGG | 0.493838 | 4.1:+5078115 | MS.gene06026:CDS |
ATGAATCACATCTTGTCAGC+TGG | 0.498735 | 4.1:+5080811 | MS.gene06026:CDS |
AGAATGAATTTATGTCCCAT+TGG | 0.500121 | 4.1:+5082187 | MS.gene06026:CDS |
CTCCAAAGTTGATTCTGAAG+TGG | 0.501205 | 4.1:-5079430 | None:intergenic |
ATAGCTTCATCCAAGTCAAA+TGG | 0.508582 | 4.1:-5082267 | None:intergenic |
ACTGGAGCAGCACTTTCAGC+AGG | 0.511785 | 4.1:-5081408 | None:intergenic |
CAGATATAGCACAATGGGAT+AGG | 0.512815 | 4.1:-5080598 | None:intergenic |
AGAAGAATAGTTCTGCTAGC+AGG | 0.513029 | 4.1:-5078360 | None:intergenic |
GAGAGTTGATTCAGCAAGAG+AGG | 0.513144 | 4.1:+5083263 | MS.gene06026:CDS |
ACCAAACCATTTAGAAGTGA+TGG | 0.513218 | 4.1:-5082028 | None:intergenic |
AGTCCTCCAGTGAAAAGGTC+TGG | 0.513876 | 4.1:-5081889 | None:intergenic |
TGGTAATGAATTCGAAGAGT+TGG | 0.516128 | 4.1:+5080734 | MS.gene06026:CDS |
TGGAAGAGATACATCAAAGA+TGG | 0.516754 | 4.1:+5081197 | MS.gene06026:CDS |
AATTTATGTCCCATTGGGAC+GGG | 0.517317 | 4.1:+5082193 | MS.gene06026:CDS |
TCACAAAGGGAGGAACCTAA+AGG | 0.517358 | 4.1:+5079489 | MS.gene06026:CDS |
GAAAAGGTCTGGCCTTCGTA+GGG | 0.518674 | 4.1:-5081878 | None:intergenic |
AACTATTATATTTGTCGATG+AGG | 0.520545 | 4.1:+5082104 | MS.gene06026:CDS |
GCATTGGGTATATTCCGTAA+AGG | 0.526760 | 4.1:+5081165 | MS.gene06026:CDS |
CTGCATATTCAATGGCCTAA+GGG | 0.528080 | 4.1:-5083511 | None:intergenic |
AAGAAAGAGTTATTACCCTT+AGG | 0.535403 | 4.1:+5083496 | MS.gene06026:CDS |
TAAATCCAAGAGAAGCAACT+TGG | 0.537809 | 4.1:-5079133 | None:intergenic |
GCTGCAAGCTTCTCTGCCGA+GGG | 0.538756 | 4.1:+5083561 | MS.gene06026:CDS |
GAACAGTTTGTCACATGCAT+TGG | 0.539309 | 4.1:+5081149 | MS.gene06026:intron |
ATGAGGTTGATAGCATGCTT+GGG | 0.541655 | 4.1:+5082121 | MS.gene06026:CDS |
ACCATGACAGACGGATATAC+CGG | 0.543702 | 4.1:+5082896 | MS.gene06026:CDS |
ACACAATGGAATGAGCTGTA+TGG | 0.544019 | 4.1:+5083603 | MS.gene06026:CDS |
ACAACAGTTTCTACCACGCT+CGG | 0.546133 | 4.1:-5081354 | None:intergenic |
GATGAGGTTGATAGCATGCT+TGG | 0.547219 | 4.1:+5082120 | MS.gene06026:CDS |
ATCCCATTGTGCTATATCTG+AGG | 0.550228 | 4.1:+5080601 | MS.gene06026:CDS |
CTGGAAGTCTCAATTGGAAG+AGG | 0.550882 | 4.1:+5080830 | MS.gene06026:CDS |
ACTTATACAGTCTCTTTACA+AGG | 0.552753 | 4.1:+5080429 | MS.gene06026:CDS |
GAATTTATGTCCCATTGGGA+CGG | 0.552908 | 4.1:+5082192 | MS.gene06026:CDS |
TCAACTTCAGTGGCAAAGGC+AGG | 0.553933 | 4.1:+5081453 | MS.gene06026:CDS |
GCACAGGCAAAGCAGTGGAA+TGG | 0.558428 | 4.1:+5079813 | MS.gene06026:CDS |
TGAAAAGGTCTGGCCTTCGT+AGG | 0.560850 | 4.1:-5081879 | None:intergenic |
TCCCATTGTGCTATATCTGA+GGG | 0.566127 | 4.1:+5080602 | MS.gene06026:CDS |
AAAGTAATGAGCCAAAGCCT+TGG | 0.568852 | 4.1:-5079106 | None:intergenic |
AATAACAATATTCCTCGGCA+TGG | 0.570070 | 4.1:-5081919 | None:intergenic |
TATTGGTTGCTGCAAGAACA+AGG | 0.570440 | 4.1:-5082242 | None:intergenic |
TGTTGTGAAACCAGCAGTGA+AGG | 0.570947 | 4.1:+5081371 | MS.gene06026:CDS |
ATCGACAAATATAATAGTTG+GGG | 0.575239 | 4.1:-5082100 | None:intergenic |
ATGATAACAGTGAGCAGACA+CGG | 0.576291 | 4.1:+5078265 | MS.gene06026:intron |
GCAGCACTTTCAGCAGGAGG+AGG | 0.576838 | 4.1:-5081402 | None:intergenic |
CTATTATAAGGCGATTTGAA+AGG | 0.578264 | 4.1:+5082286 | MS.gene06026:CDS |
TCCGGTATATCCGTCTGTCA+TGG | 0.580164 | 4.1:-5082897 | None:intergenic |
GCCCAAATAACAATATTCCT+CGG | 0.581038 | 4.1:-5081924 | None:intergenic |
GTAATCCTCCAAAGCTCCGT+AGG | 0.582339 | 4.1:+5079972 | MS.gene06026:CDS |
GACGGGCTCACGACAAAACA+AGG | 0.585226 | 4.1:+5082210 | MS.gene06026:CDS |
TTACCAACAGGTGCTTGCCA+AGG | 0.585988 | 4.1:+5079089 | MS.gene06026:CDS |
AATATCAACTTCAGTGGCAA+AGG | 0.588775 | 4.1:+5081449 | MS.gene06026:CDS |
ACTACCATCTGTTGAGAACA+GGG | 0.590750 | 4.1:+5082805 | MS.gene06026:CDS |
GCAAGAGAGGTTAAAGGACC+TGG | 0.591773 | 4.1:+5083276 | MS.gene06026:CDS |
GTCTGATTTCTATATCGTAT+GGG | 0.593760 | 4.1:-5080779 | None:intergenic |
TTATAAGGCGATTTGAAAGG+AGG | 0.598715 | 4.1:+5082289 | MS.gene06026:CDS |
GCTGGCAAAGGCCATTGCAA+AGG | 0.601879 | 4.1:+5081969 | MS.gene06026:CDS |
AAGCCTTGGCAAGCACCTGT+TGG | 0.603838 | 4.1:-5079092 | None:intergenic |
GAATGGGTGAGCTGACACAA+TGG | 0.609246 | 4.1:+5083589 | MS.gene06026:CDS |
GAATATGCAGGATTTCAAAG+AGG | 0.609477 | 4.1:+5083524 | MS.gene06026:CDS |
CATATGTGTGGAAGACACAA+TGG | 0.611126 | 4.1:+5080941 | MS.gene06026:CDS |
TTGTAATGCAGAATTATGGT+AGG | 0.614621 | 4.1:+5082782 | MS.gene06026:intron |
AAGTAGAAGAAGCATTCCTA+CGG | 0.616716 | 4.1:-5079988 | None:intergenic |
GAACATAAAGATTCCGAGCG+TGG | 0.616823 | 4.1:+5081341 | MS.gene06026:intron |
TTTAGAAGTGATGGTAGACA+TGG | 0.625906 | 4.1:-5082019 | None:intergenic |
GGATCAAGCTCTAAAATCTG+AGG | 0.630828 | 4.1:+5081221 | MS.gene06026:CDS |
AGCAGAAATATCAACTTCAG+TGG | 0.635357 | 4.1:+5081443 | MS.gene06026:CDS |
AAAATGCACAGGCAAAGCAG+TGG | 0.638842 | 4.1:+5079808 | MS.gene06026:CDS |
TGACTTGGATTCCATATGTG+TGG | 0.639685 | 4.1:+5080929 | MS.gene06026:CDS |
AGATGTGATTCATCTTCTGG+AGG | 0.643446 | 4.1:-5080801 | None:intergenic |
ATCCCTCAGATATAGCACAA+TGG | 0.643871 | 4.1:-5080604 | None:intergenic |
TAGTAATGCTTCCCCTACGA+AGG | 0.644889 | 4.1:+5081866 | MS.gene06026:CDS |
AAGAGATACATCAAAGATGG+AGG | 0.649416 | 4.1:+5081200 | MS.gene06026:CDS |
AGGGTAATAACTCTTTCTTG+TGG | 0.655070 | 4.1:-5083492 | None:intergenic |
GGAGCAGCACTTTCAGCAGG+AGG | 0.656104 | 4.1:-5081405 | None:intergenic |
TGGAATGAGCTGTATGGAGA+AGG | 0.660183 | 4.1:+5083609 | MS.gene06026:CDS |
TGGGCAACGAACAAGAGTTG+GGG | 0.663916 | 4.1:+5082140 | MS.gene06026:CDS |
TGTGAAACCAGCAGTGAAGG+CGG | 0.664475 | 4.1:+5081374 | MS.gene06026:CDS |
TGATAACAGTGAGCAGACAC+GGG | 0.677219 | 4.1:+5078266 | MS.gene06026:intron |
AAAAGGTCTGGCCTTCGTAG+GGG | 0.686155 | 4.1:-5081877 | None:intergenic |
GGACTTCTAAAACCATGCCG+AGG | 0.702159 | 4.1:+5081907 | MS.gene06026:CDS |
GTAAATGAAACTAACCAGCA+GGG | 0.702987 | 4.1:-5078389 | None:intergenic |
GAACTCGCGACCATGACAGA+CGG | 0.704046 | 4.1:+5082887 | MS.gene06026:CDS |
AATGAGCTGTATGGAGAAGG+TGG | 0.711147 | 4.1:+5083612 | MS.gene06026:CDS |
TTGGGGAGCATGAAGCCATG+CGG | 0.720295 | 4.1:+5082157 | MS.gene06026:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATAGAAGATAAAAT+AGG | - | chr4.1:5079315-5079334 | None:intergenic | 10.0% |
!!! | ATATATTTTAAAGACTAAAT+TGG | + | chr4.1:5082622-5082641 | MS.gene06026:intron | 10.0% |
!!! | TTATTATATTTCTATATTCT+CGG | - | chr4.1:5082489-5082508 | None:intergenic | 10.0% |
!!! | TTATTTTATGATCTATAATA+AGG | + | chr4.1:5078934-5078953 | MS.gene06026:intron | 10.0% |
!!! | TTTTATTTTATATTCTTACT+TGG | + | chr4.1:5079912-5079931 | MS.gene06026:intron | 10.0% |
!! | AAATAAAATAGAATGAAAGT+AGG | - | chr4.1:5079900-5079919 | None:intergenic | 15.0% |
!! | ATCTTATTCAGTTATAATTT+AGG | + | chr4.1:5080094-5080113 | MS.gene06026:intron | 15.0% |
!! | GAATAATGATAACTTATATT+TGG | + | chr4.1:5079626-5079645 | MS.gene06026:intron | 15.0% |
!! | TGACAGAAAAAAAAAAAAAT+TGG | - | chr4.1:5078844-5078863 | None:intergenic | 15.0% |
!! | TGTAGTACTATATTATTATA+GGG | - | chr4.1:5083161-5083180 | None:intergenic | 15.0% |
!! | TTAATCTTAATTTATGTTGA+GGG | + | chr4.1:5082680-5082699 | MS.gene06026:intron | 15.0% |
!! | TTAATTAAACAATATGAGTT+TGG | - | chr4.1:5080211-5080230 | None:intergenic | 15.0% |
!! | TTGTAGTACTATATTATTAT+AGG | - | chr4.1:5083162-5083181 | None:intergenic | 15.0% |
!! | TTTAATCTTAATTTATGTTG+AGG | + | chr4.1:5082679-5082698 | MS.gene06026:intron | 15.0% |
!!! | ATATTTTCTTATGTTTTCAA+TGG | + | chr4.1:5082944-5082963 | MS.gene06026:intron | 15.0% |
!!! | ATTTTCAATATTTTCACAAA+GGG | + | chr4.1:5079476-5079495 | MS.gene06026:CDS | 15.0% |
!!! | GAAATTTTGATTAAAAACAA+AGG | - | chr4.1:5081518-5081537 | None:intergenic | 15.0% |
!!! | TCAGTAATATTGATTTAAAT+GGG | - | chr4.1:5079764-5079783 | None:intergenic | 15.0% |
!!! | TTGTATTATATTTCTATAGA+GGG | - | chr4.1:5082546-5082565 | None:intergenic | 15.0% |
!!! | TTTGTATTATATTTCTATAG+AGG | - | chr4.1:5082547-5082566 | None:intergenic | 15.0% |
!! | AAAAAACCTGTATTAAAGAT+TGG | - | chr4.1:5079586-5079605 | None:intergenic | 20.0% |
!! | AAAAGAAACCAATTCTATAA+AGG | - | chr4.1:5080240-5080259 | None:intergenic | 20.0% |
!! | AAAGAAACCAATTCTATAAA+GGG | - | chr4.1:5080239-5080258 | None:intergenic | 20.0% |
!! | AGATGTTAAAACATAATTTC+TGG | - | chr4.1:5083308-5083327 | None:intergenic | 20.0% |
!! | ATAAATTCCCTTATTATCTA+AGG | + | chr4.1:5078161-5078180 | MS.gene06026:intron | 20.0% |
!! | ATGTTAAAACATAATTTCTG+GGG | - | chr4.1:5083306-5083325 | None:intergenic | 20.0% |
!! | GATGTTAAAACATAATTTCT+GGG | - | chr4.1:5083307-5083326 | None:intergenic | 20.0% |
!! | GTCTAAGAATTAAATTGAAA+AGG | - | chr4.1:5080316-5080335 | None:intergenic | 20.0% |
!! | TAATATAAACAGCATATAGA+AGG | - | chr4.1:5083368-5083387 | None:intergenic | 20.0% |
!! | TCTCAAAATTATGCTTATTA+TGG | - | chr4.1:5080148-5080167 | None:intergenic | 20.0% |
!! | TGATTATGAAAACAAATCAA+AGG | - | chr4.1:5078225-5078244 | None:intergenic | 20.0% |
!! | TTATCAAATCAATATCTTTG+TGG | - | chr4.1:5080537-5080556 | None:intergenic | 20.0% |
!!! | AAACAATTTTCCTAAATCTT+AGG | - | chr4.1:5081627-5081646 | None:intergenic | 20.0% |
!!! | ATCTTTAATACAGGTTTTTT+CGG | + | chr4.1:5079586-5079605 | MS.gene06026:intron | 20.0% |
!!! | CATTTTCAATATTTTCACAA+AGG | + | chr4.1:5079475-5079494 | MS.gene06026:CDS | 20.0% |
!!! | GTCAGTAATATTGATTTAAA+TGG | - | chr4.1:5079765-5079784 | None:intergenic | 20.0% |
!!! | TTTTGAAAGACTATAATCAA+AGG | - | chr4.1:5079407-5079426 | None:intergenic | 20.0% |
! | AAAAAAGCAGAGAAATAAAG+TGG | - | chr4.1:5082360-5082379 | None:intergenic | 25.0% |
! | AAAAACCTTTAAATCACTTC+CGG | - | chr4.1:5082918-5082937 | None:intergenic | 25.0% |
! | AAATGCATATTAGTTGTACA+AGG | - | chr4.1:5081302-5081321 | None:intergenic | 25.0% |
! | AACATTTCCCTTTATAGAAT+TGG | + | chr4.1:5080229-5080248 | MS.gene06026:intron | 25.0% |
! | AACTATTATATTTGTCGATG+AGG | + | chr4.1:5082104-5082123 | MS.gene06026:CDS | 25.0% |
! | AATAAGTTGTTTATCCAAAC+AGG | + | chr4.1:5083135-5083154 | MS.gene06026:intron | 25.0% |
! | ATACACACACAAAATATAGA+TGG | - | chr4.1:5082731-5082750 | None:intergenic | 25.0% |
! | ATCGACAAATATAATAGTTG+GGG | - | chr4.1:5082103-5082122 | None:intergenic | 25.0% |
! | ATGAATTTGAAAAGCGAATA+AGG | + | chr4.1:5081758-5081777 | MS.gene06026:CDS | 25.0% |
! | ATGTTACATGTCTACATTAA+TGG | + | chr4.1:5079220-5079239 | MS.gene06026:intron | 25.0% |
! | CATCGACAAATATAATAGTT+GGG | - | chr4.1:5082104-5082123 | None:intergenic | 25.0% |
! | CTTAAATTTCTCTCTTTATG+TGG | + | chr4.1:5079700-5079719 | MS.gene06026:intron | 25.0% |
! | TAAGGGATTCAATTCAAATA+TGG | + | chr4.1:5078433-5078452 | MS.gene06026:intron | 25.0% |
! | TCAAATAAACCAATCTAAAC+AGG | - | chr4.1:5082983-5083002 | None:intergenic | 25.0% |
! | TCATCGACAAATATAATAGT+TGG | - | chr4.1:5082105-5082124 | None:intergenic | 25.0% |
! | TCTATTGTAATGCAGAATTA+TGG | + | chr4.1:5082778-5082797 | MS.gene06026:intron | 25.0% |
! | TCTTCTACTTCAAATATTAG+CGG | + | chr4.1:5080001-5080020 | MS.gene06026:CDS | 25.0% |
! | TGGCATAATAAAATGAAGAA+TGG | - | chr4.1:5082340-5082359 | None:intergenic | 25.0% |
!! | AGATTTTCGTGTATCTATTT+TGG | + | chr4.1:5078488-5078507 | MS.gene06026:intron | 25.0% |
!! | AGCTAATTATTTCTTGCAAT+AGG | + | chr4.1:5081051-5081070 | MS.gene06026:CDS | 25.0% |
!! | TAATTGAAAGTTTTACTTGC+AGG | + | chr4.1:5080554-5080573 | MS.gene06026:intron | 25.0% |
!! | TATATTTTGTGTGTGTATGT+GGG | + | chr4.1:5082733-5082752 | MS.gene06026:intron | 25.0% |
!! | TGCTGTTTATATTACTTAAC+AGG | + | chr4.1:5083374-5083393 | MS.gene06026:intron | 25.0% |
!! | TTCTCTTTTTGCAATCATAA+GGG | + | chr4.1:5078416-5078435 | MS.gene06026:intron | 25.0% |
!! | TTTTCAAATTCATTATCAGG+AGG | - | chr4.1:5081751-5081770 | None:intergenic | 25.0% |
!! | TTTTCAATGGACATAACTAT+GGG | + | chr4.1:5082957-5082976 | MS.gene06026:intron | 25.0% |
!!! | ATGCTCAATGTTTTTTATGT+AGG | + | chr4.1:5079656-5079675 | MS.gene06026:intron | 25.0% |
!!! | CATAAATTTTTCAAGAAACC+TGG | - | chr4.1:5080055-5080074 | None:intergenic | 25.0% |
!!! | CTGAGTTTCTTTTAAAAACT+TGG | - | chr4.1:5078734-5078753 | None:intergenic | 25.0% |
!!! | CTGATAATGTGTTTTCATTA+TGG | + | chr4.1:5083339-5083358 | MS.gene06026:intron | 25.0% |
!!! | GAATCTCAATGTTTTAATCA+TGG | + | chr4.1:5079000-5079019 | MS.gene06026:intron | 25.0% |
!!! | GGACAAAGAAATTGATTTTA+AGG | + | chr4.1:5082865-5082884 | MS.gene06026:CDS | 25.0% |
!!! | TTTAACTGACTTTTCATTGA+AGG | + | chr4.1:5079152-5079171 | MS.gene06026:CDS | 25.0% |
!!! | TTTTCTGTCATTTTGATTTG+AGG | + | chr4.1:5078854-5078873 | MS.gene06026:intron | 25.0% |
AAATAGTCAAGAAGCAAAAG+AGG | + | chr4.1:5083461-5083480 | MS.gene06026:CDS | 30.0% | |
AAGAAAGAGTTATTACCCTT+AGG | + | chr4.1:5083496-5083515 | MS.gene06026:CDS | 30.0% | |
ACTTATACAGTCTCTTTACA+AGG | + | chr4.1:5080429-5080448 | MS.gene06026:CDS | 30.0% | |
ACTTGGATGAAGCTATTATA+AGG | + | chr4.1:5082274-5082293 | MS.gene06026:CDS | 30.0% | |
AGAAGCTATCTGACATATTT+GGG | + | chr4.1:5079451-5079470 | MS.gene06026:CDS | 30.0% | |
AGAATGAATTTATGTCCCAT+TGG | + | chr4.1:5082187-5082206 | MS.gene06026:CDS | 30.0% | |
AGACAAAGAATAGCAGAATT+CGG | - | chr4.1:5079373-5079392 | None:intergenic | 30.0% | |
ATATACCGGAAGTGATTTAA+AGG | + | chr4.1:5082910-5082929 | MS.gene06026:CDS | 30.0% | |
ATATTATTATAGGGCCTGTT+TGG | - | chr4.1:5083152-5083171 | None:intergenic | 30.0% | |
ATCAGAAAAAAAGAAGAGAG+AGG | - | chr4.1:5081665-5081684 | None:intergenic | 30.0% | |
ATGATTGCAAAAAGAGAAGA+TGG | - | chr4.1:5078414-5078433 | None:intergenic | 30.0% | |
ATGCTTAGACTTATTGTTGA+CGG | + | chr4.1:5078115-5078134 | MS.gene06026:CDS | 30.0% | |
ATTTGTAGCATTCCTTGATT+AGG | - | chr4.1:5080124-5080143 | None:intergenic | 30.0% | |
CAAAAATACTCAAGAAGCAA+AGG | + | chr4.1:5083428-5083447 | MS.gene06026:CDS | 30.0% | |
CAAATCAATATCTTTGTGGA+TGG | - | chr4.1:5080533-5080552 | None:intergenic | 30.0% | |
CCATAACTTAACCAAAAAGT+GGG | - | chr4.1:5082417-5082436 | None:intergenic | 30.0% | |
CTATTATAAGGCGATTTGAA+AGG | + | chr4.1:5082286-5082305 | MS.gene06026:CDS | 30.0% | |
GAATGAATTTATGTCCCATT+GGG | + | chr4.1:5082188-5082207 | MS.gene06026:CDS | 30.0% | |
GACATGTAACATCACAAAAT+AGG | - | chr4.1:5079212-5079231 | None:intergenic | 30.0% | |
GACTTCATATCCTAAGATTT+AGG | + | chr4.1:5081614-5081633 | MS.gene06026:intron | 30.0% | |
GATGTTACATTCTCTGATAT+TGG | + | chr4.1:5081808-5081827 | MS.gene06026:CDS | 30.0% | |
GTCTGATTTCTATATCGTAT+GGG | - | chr4.1:5080782-5080801 | None:intergenic | 30.0% | |
TAAAAAGATTTCAGCATCAG+AGG | + | chr4.1:5080470-5080489 | MS.gene06026:intron | 30.0% | |
TAAGAAACAGAAAGCTACTA+AGG | + | chr4.1:5083398-5083417 | MS.gene06026:CDS | 30.0% | |
TACTTTACATATTCACTTGC+AGG | + | chr4.1:5081720-5081739 | MS.gene06026:intron | 30.0% | |
TAGCTTAGAGATCAAATTGA+AGG | + | chr4.1:5082656-5082675 | MS.gene06026:intron | 30.0% | |
TCAATCAAGAATAAGCTTGA+CGG | - | chr4.1:5078699-5078718 | None:intergenic | 30.0% | |
TCCATAACTTAACCAAAAAG+TGG | - | chr4.1:5082418-5082437 | None:intergenic | 30.0% | |
TCTTAAAGAACTTTACCAAC+AGG | + | chr4.1:5079077-5079096 | MS.gene06026:intron | 30.0% | |
TTAATTTATGTTGAGGGAGA+AGG | + | chr4.1:5082686-5082705 | MS.gene06026:intron | 30.0% | |
TTATTCTTCAAACCAGAACA+AGG | - | chr4.1:5079612-5079631 | None:intergenic | 30.0% | |
TTCCATTGAATTTCCCTTTA+CGG | - | chr4.1:5081182-5081201 | None:intergenic | 30.0% | |
TTGAAATCCTGCATATTCAA+TGG | - | chr4.1:5083522-5083541 | None:intergenic | 30.0% | |
TTGTAATGCAGAATTATGGT+AGG | + | chr4.1:5082782-5082801 | MS.gene06026:intron | 30.0% | |
! | AAAAGGATTTTACAGTGCAT+TGG | - | chr4.1:5080299-5080318 | None:intergenic | 30.0% |
! | AATTTAGGATCTCCTAATCA+AGG | + | chr4.1:5080109-5080128 | MS.gene06026:intron | 30.0% |
! | AGAACAGGGAAAAGATTTTA+AGG | + | chr4.1:5082819-5082838 | MS.gene06026:CDS | 30.0% |
! | CGCTTTTCAAATTCATTATC+AGG | - | chr4.1:5081754-5081773 | None:intergenic | 30.0% |
! | CTATATTTTGTGTGTGTATG+TGG | + | chr4.1:5082732-5082751 | MS.gene06026:intron | 30.0% |
! | CTTCTCTTTTTGCAATCATA+AGG | + | chr4.1:5078415-5078434 | MS.gene06026:intron | 30.0% |
! | GACTCTTTTGTCAAAAGAAA+AGG | + | chr4.1:5082841-5082860 | MS.gene06026:CDS | 30.0% |
! | GTTTTCAATGGACATAACTA+TGG | + | chr4.1:5082956-5082975 | MS.gene06026:intron | 30.0% |
! | TATGAAGATGATTCAAGTTC+AGG | + | chr4.1:5080854-5080873 | MS.gene06026:CDS | 30.0% |
! | TCTTTTGTCAAAAGAAAAGG+TGG | + | chr4.1:5082844-5082863 | MS.gene06026:CDS | 30.0% |
! | TTCAATATTTTCACAAAGGG+AGG | + | chr4.1:5079479-5079498 | MS.gene06026:CDS | 30.0% |
!! | AAGGAATTTGTTGTACCTTT+AGG | - | chr4.1:5079507-5079526 | None:intergenic | 30.0% |
!!! | AGAGTCTCTTCAACATTTTT+TGG | - | chr4.1:5080674-5080693 | None:intergenic | 30.0% |
!!! | TTCATTCTTTATTTTCCGCA+TGG | - | chr4.1:5082175-5082194 | None:intergenic | 30.0% |
AAAATGTTGAAGAGACTCTC+TGG | + | chr4.1:5080675-5080694 | MS.gene06026:CDS | 35.0% | |
AAAGACCTCGAATACAGAAA+TGG | + | chr4.1:5081026-5081045 | MS.gene06026:CDS | 35.0% | |
AACAGTTTGTCACATGCATT+GGG | + | chr4.1:5081150-5081169 | MS.gene06026:intron | 35.0% | |
AAGAGATACATCAAAGATGG+AGG | + | chr4.1:5081200-5081219 | MS.gene06026:CDS | 35.0% | |
AAGCTTAATACTCGACAGAT+AGG | + | chr4.1:5081581-5081600 | MS.gene06026:intron | 35.0% | |
AAGTTTGACAGCAAAGATCA+AGG | - | chr4.1:5083199-5083218 | None:intergenic | 35.0% | |
AATAACAATATTCCTCGGCA+TGG | - | chr4.1:5081922-5081941 | None:intergenic | 35.0% | |
AATACTCGACAGATAGGTAT+TGG | + | chr4.1:5081587-5081606 | MS.gene06026:intron | 35.0% | |
AATATCAACTTCAGTGGCAA+AGG | + | chr4.1:5081449-5081468 | MS.gene06026:CDS | 35.0% | |
ACAAGATGTGATTCATCTTC+TGG | - | chr4.1:5080807-5080826 | None:intergenic | 35.0% | |
ACCAAACCATTTAGAAGTGA+TGG | - | chr4.1:5082031-5082050 | None:intergenic | 35.0% | |
ACCAAGGATTTGAAGATGTA+AGG | - | chr4.1:5079526-5079545 | None:intergenic | 35.0% | |
ACCATCACTTCTAAATGGTT+TGG | + | chr4.1:5082027-5082046 | MS.gene06026:CDS | 35.0% | |
AGCAGAAATATCAACTTCAG+TGG | + | chr4.1:5081443-5081462 | MS.gene06026:CDS | 35.0% | |
AGGGTAATAACTCTTTCTTG+TGG | - | chr4.1:5083495-5083514 | None:intergenic | 35.0% | |
ATAGCTTCATCCAAGTCAAA+TGG | - | chr4.1:5082270-5082289 | None:intergenic | 35.0% | |
ATCCACTTCAGAATCAACTT+TGG | + | chr4.1:5079428-5079447 | MS.gene06026:CDS | 35.0% | |
ATGCCTTGCCTTAGATAATA+AGG | - | chr4.1:5078172-5078191 | None:intergenic | 35.0% | |
ATTCAGGGTAAATATGGTTC+TGG | + | chr4.1:5079266-5079285 | MS.gene06026:CDS | 35.0% | |
CATTGGGTATATTCCGTAAA+GGG | + | chr4.1:5081166-5081185 | MS.gene06026:CDS | 35.0% | |
CTGTTCCACAAGAATTAGTA+AGG | - | chr4.1:5081135-5081154 | None:intergenic | 35.0% | |
GAAAACTTATTCTTTGTCCC+CGG | + | chr4.1:5078620-5078639 | MS.gene06026:intron | 35.0% | |
GAATATGCAGGATTTCAAAG+AGG | + | chr4.1:5083524-5083543 | MS.gene06026:CDS | 35.0% | |
GAGAAGCTATCTGACATATT+TGG | + | chr4.1:5079450-5079469 | MS.gene06026:CDS | 35.0% | |
GATGTCCTTACTAATTCTTG+TGG | + | chr4.1:5081127-5081146 | MS.gene06026:intron | 35.0% | |
GCCCAAATAACAATATTCCT+CGG | - | chr4.1:5081927-5081946 | None:intergenic | 35.0% | |
GCTTTGCCAATCTTTAATAC+AGG | + | chr4.1:5079577-5079596 | MS.gene06026:intron | 35.0% | |
GGACATAAGCAATTCTTCTT+GGG | + | chr4.1:5078509-5078528 | MS.gene06026:intron | 35.0% | |
GGTCTGATTTCTATATCGTA+TGG | - | chr4.1:5080783-5080802 | None:intergenic | 35.0% | |
GTAAATGAAACTAACCAGCA+GGG | - | chr4.1:5078392-5078411 | None:intergenic | 35.0% | |
GTAACATCAATCTCATTTGC+TGG | - | chr4.1:5081796-5081815 | None:intergenic | 35.0% | |
TAAATCCAAGAGAAGCAACT+TGG | - | chr4.1:5079136-5079155 | None:intergenic | 35.0% | |
TATAATAGTTGGGGAGACTT+TGG | - | chr4.1:5082094-5082113 | None:intergenic | 35.0% | |
TATATCTGAGGGATGTTGAT+AGG | + | chr4.1:5080613-5080632 | MS.gene06026:CDS | 35.0% | |
TCAACTATTGTCAATCCATC+AGG | + | chr4.1:5082517-5082536 | MS.gene06026:intron | 35.0% | |
TCCTTACATCTTCAAATCCT+TGG | + | chr4.1:5079522-5079541 | MS.gene06026:intron | 35.0% | |
TGAGGGAGAAGGAAAAATTA+TGG | + | chr4.1:5082697-5082716 | MS.gene06026:intron | 35.0% | |
TGCCTTGCCTTAGATAATAA+GGG | - | chr4.1:5078171-5078190 | None:intergenic | 35.0% | |
TGGAAGAGATACATCAAAGA+TGG | + | chr4.1:5081197-5081216 | MS.gene06026:CDS | 35.0% | |
TGGACATAAGCAATTCTTCT+TGG | + | chr4.1:5078508-5078527 | MS.gene06026:intron | 35.0% | |
TGTCTACCATCACTTCTAAA+TGG | + | chr4.1:5082022-5082041 | MS.gene06026:CDS | 35.0% | |
TTATAAGGCGATTTGAAAGG+AGG | + | chr4.1:5082289-5082308 | MS.gene06026:CDS | 35.0% | |
TTATGTAGGATGCTTGTAAC+TGG | + | chr4.1:5079670-5079689 | MS.gene06026:intron | 35.0% | |
TTCAAGAAACCTGGATTTGT+AGG | - | chr4.1:5080046-5080065 | None:intergenic | 35.0% | |
TTCCGTAAAGGGAAATTCAA+TGG | + | chr4.1:5081177-5081196 | MS.gene06026:CDS | 35.0% | |
TTCTATATTCTCGGCCAAAT+AGG | - | chr4.1:5082480-5082499 | None:intergenic | 35.0% | |
TTGGGACAATGAAGAATTGA+TGG | + | chr4.1:5078527-5078546 | MS.gene06026:intron | 35.0% | |
TTTAGAAGTGATGGTAGACA+TGG | - | chr4.1:5082022-5082041 | None:intergenic | 35.0% | |
! | CGATTCTTTTGTCTCTTCTA+AGG | - | chr4.1:5081836-5081855 | None:intergenic | 35.0% |
! | TGCCGAGGAATATTGTTATT+TGG | + | chr4.1:5081922-5081941 | MS.gene06026:CDS | 35.0% |
! | TGGTAATGAATTCGAAGAGT+TGG | + | chr4.1:5080734-5080753 | MS.gene06026:CDS | 35.0% |
! | TGTCTAGTTCCGAAAAACAT+GGG | - | chr4.1:5080499-5080518 | None:intergenic | 35.0% |
! | TTCCCTTATTATCTAAGGCA+AGG | + | chr4.1:5078166-5078185 | MS.gene06026:intron | 35.0% |
! | TTGTCTAGTTCCGAAAAACA+TGG | - | chr4.1:5080500-5080519 | None:intergenic | 35.0% |
! | TTTTTCATCAAAAGACCAGC+TGG | - | chr4.1:5080407-5080426 | None:intergenic | 35.0% |
!! | AAGTAGAAGAAGCATTCCTA+CGG | - | chr4.1:5079991-5080010 | None:intergenic | 35.0% |
!! | AATCTAGCTCTAATTCACCA+AGG | - | chr4.1:5079542-5079561 | None:intergenic | 35.0% |
!! | GATGGATTGACAATAGTTGA+GGG | - | chr4.1:5082517-5082536 | None:intergenic | 35.0% |
!! | GCCGAGGAATATTGTTATTT+GGG | + | chr4.1:5081923-5081942 | MS.gene06026:CDS | 35.0% |
!! | GTATTGTCTGTTGATTTGCA+GGG | + | chr4.1:5079934-5079953 | MS.gene06026:intron | 35.0% |
!! | GTTTTTCGGAACTAGACAAT+TGG | + | chr4.1:5080501-5080520 | MS.gene06026:intron | 35.0% |
!! | TAAGCTTTGTGAGACTGTTT+TGG | + | chr4.1:5083018-5083037 | MS.gene06026:intron | 35.0% |
!! | TATTGTCTGTTGATTTGCAG+GGG | + | chr4.1:5079935-5079954 | MS.gene06026:intron | 35.0% |
!! | TGATGGATTGACAATAGTTG+AGG | - | chr4.1:5082518-5082537 | None:intergenic | 35.0% |
!!! | CCCACTTTTTGGTTAAGTTA+TGG | + | chr4.1:5082414-5082433 | MS.gene06026:intron | 35.0% |
AAAGTAATGAGCCAAAGCCT+TGG | - | chr4.1:5079109-5079128 | None:intergenic | 40.0% | |
AACCAATAGGCCATTTGACT+TGG | + | chr4.1:5082257-5082276 | MS.gene06026:CDS | 40.0% | |
AACTATGGGCCTGTTTAGAT+TGG | + | chr4.1:5082971-5082990 | MS.gene06026:intron | 40.0% | |
AATTTATGTCCCATTGGGAC+GGG | + | chr4.1:5082193-5082212 | MS.gene06026:CDS | 40.0% | |
ACACAATGGAATGAGCTGTA+TGG | + | chr4.1:5083603-5083622 | MS.gene06026:CDS | 40.0% | |
ACTACCATCTGTTGAGAACA+GGG | + | chr4.1:5082805-5082824 | MS.gene06026:CDS | 40.0% | |
AGAATAGCAGAATTCGGAAC+AGG | - | chr4.1:5079367-5079386 | None:intergenic | 40.0% | |
AGATGTGATTCATCTTCTGG+AGG | - | chr4.1:5080804-5080823 | None:intergenic | 40.0% | |
AGCAGAACTATTCTTCTCTC+TGG | + | chr4.1:5078366-5078385 | MS.gene06026:CDS | 40.0% | |
AGTCCAAGAACAACTAATCC+GGG | - | chr4.1:5078641-5078660 | None:intergenic | 40.0% | |
ATCCAAGTCAAATGGCCTAT+TGG | - | chr4.1:5082262-5082281 | None:intergenic | 40.0% | |
ATCCCATTGTGCTATATCTG+AGG | + | chr4.1:5080601-5080620 | MS.gene06026:CDS | 40.0% | |
ATCCCTCAGATATAGCACAA+TGG | - | chr4.1:5080607-5080626 | None:intergenic | 40.0% | |
ATGAATCACATCTTGTCAGC+TGG | + | chr4.1:5080811-5080830 | MS.gene06026:CDS | 40.0% | |
ATGATAACAGTGAGCAGACA+CGG | + | chr4.1:5078265-5078284 | MS.gene06026:intron | 40.0% | |
CAAAAAGTGGGTGACAAAGA+TGG | - | chr4.1:5082405-5082424 | None:intergenic | 40.0% | |
CAAAGCAATCCTACAAATCC+AGG | + | chr4.1:5080034-5080053 | MS.gene06026:CDS | 40.0% | |
CAGATATAGCACAATGGGAT+AGG | - | chr4.1:5080601-5080620 | None:intergenic | 40.0% | |
CAGTCCAAGAACAACTAATC+CGG | - | chr4.1:5078642-5078661 | None:intergenic | 40.0% | |
CATATGTGTGGAAGACACAA+TGG | + | chr4.1:5080941-5080960 | MS.gene06026:CDS | 40.0% | |
CATTGTGTCTTCCACACATA+TGG | - | chr4.1:5080943-5080962 | None:intergenic | 40.0% | |
CCACATGCAAAATTAGTTGC+AGG | + | chr4.1:5079784-5079803 | MS.gene06026:intron | 40.0% | |
CTACGATTCTCTCTCCTATT+TGG | + | chr4.1:5082463-5082482 | MS.gene06026:intron | 40.0% | |
CTATGATTGCTGCAGATTCA+GGG | + | chr4.1:5079251-5079270 | MS.gene06026:intron | 40.0% | |
CTGCAGATTCAGGGTAAATA+TGG | + | chr4.1:5079260-5079279 | MS.gene06026:intron | 40.0% | |
CTGCATATTCAATGGCCTAA+GGG | - | chr4.1:5083514-5083533 | None:intergenic | 40.0% | |
GAACAGTTTGTCACATGCAT+TGG | + | chr4.1:5081149-5081168 | MS.gene06026:intron | 40.0% | |
GAATAGCAGAATTCGGAACA+GGG | - | chr4.1:5079366-5079385 | None:intergenic | 40.0% | |
GAATTTATGTCCCATTGGGA+CGG | + | chr4.1:5082192-5082211 | MS.gene06026:CDS | 40.0% | |
GATTCAGCAAGAGAGGTTAA+AGG | + | chr4.1:5083270-5083289 | MS.gene06026:CDS | 40.0% | |
GCATTGGGTATATTCCGTAA+AGG | + | chr4.1:5081165-5081184 | MS.gene06026:CDS | 40.0% | |
GCTTTCCATTTCTGTATTCG+AGG | - | chr4.1:5081034-5081053 | None:intergenic | 40.0% | |
GGTAAATGAAACTAACCAGC+AGG | - | chr4.1:5078393-5078412 | None:intergenic | 40.0% | |
GTCATCGCAATCAAGATCAT+TGG | - | chr4.1:5080913-5080932 | None:intergenic | 40.0% | |
TAGTTGCAGGAAAAATGCAC+AGG | + | chr4.1:5079797-5079816 | MS.gene06026:intron | 40.0% | |
TCCCATTGTGCTATATCTGA+GGG | + | chr4.1:5080602-5080621 | MS.gene06026:CDS | 40.0% | |
TCCCTCAGATATAGCACAAT+GGG | - | chr4.1:5080606-5080625 | None:intergenic | 40.0% | |
TCTGGACCAATTCTGATTCT+TGG | + | chr4.1:5080693-5080712 | MS.gene06026:CDS | 40.0% | |
TGATCTTGATTGCGATGACT+TGG | + | chr4.1:5080914-5080933 | MS.gene06026:CDS | 40.0% | |
TGCTGAATCAACTCTCTAAC+TGG | - | chr4.1:5083259-5083278 | None:intergenic | 40.0% | |
TGGAAAAACAATGCTGGCAA+AGG | + | chr4.1:5081957-5081976 | MS.gene06026:CDS | 40.0% | |
TGGAACTGGAAAAACAATGC+TGG | + | chr4.1:5081951-5081970 | MS.gene06026:CDS | 40.0% | |
TTAGAAGTCCTCCAGTGAAA+AGG | - | chr4.1:5081897-5081916 | None:intergenic | 40.0% | |
TTGTTCTTGCAGCAACCAAT+AGG | + | chr4.1:5082244-5082263 | MS.gene06026:CDS | 40.0% | |
TTTCAAAGAGGCCAAGAATC+AGG | + | chr4.1:5083536-5083555 | MS.gene06026:CDS | 40.0% | |
! | AAGTGCTGCTCCAGTAAAAA+AGG | + | chr4.1:5081416-5081435 | MS.gene06026:CDS | 40.0% |
! | AGAAGAATAGTTCTGCTAGC+AGG | - | chr4.1:5078363-5078382 | None:intergenic | 40.0% |
! | AGGCTTACAGAAGCTTTTGA+TGG | - | chr4.1:5081498-5081517 | None:intergenic | 40.0% |
! | CAGAGGATTCCCATGTTTTT+CGG | + | chr4.1:5080487-5080506 | MS.gene06026:intron | 40.0% |
! | CATAATTTCTGGGGATTACC+AGG | - | chr4.1:5083297-5083316 | None:intergenic | 40.0% |
! | CCTGCAACTAATTTTGCATG+TGG | - | chr4.1:5079787-5079806 | None:intergenic | 40.0% |
! | CTCCAAAGTTGATTCTGAAG+TGG | - | chr4.1:5079433-5079452 | None:intergenic | 40.0% |
! | CTTACAGAAGCTTTTGATGG+TGG | - | chr4.1:5081495-5081514 | None:intergenic | 40.0% |
! | TATTGGTTGCTGCAAGAACA+AGG | - | chr4.1:5082245-5082264 | None:intergenic | 40.0% |
! | TCATTTGCTGGTATGACTTC+AGG | - | chr4.1:5081784-5081803 | None:intergenic | 40.0% |
! | TGACTTGGATTCCATATGTG+TGG | + | chr4.1:5080929-5080948 | MS.gene06026:CDS | 40.0% |
! | TTTTCCCTGTTCTCAACAGA+TGG | - | chr4.1:5082812-5082831 | None:intergenic | 40.0% |
!! | AAAGGCAGGTGTTGAAAAAC+CGG | + | chr4.1:5081467-5081486 | MS.gene06026:CDS | 40.0% |
!! | AGCATTGTTTTTCCAGTTCC+AGG | - | chr4.1:5081952-5081971 | None:intergenic | 40.0% |
!! | ATATTGTTATTTGGGCCTCC+TGG | + | chr4.1:5081931-5081950 | MS.gene06026:CDS | 40.0% |
!! | ATGAGGTTGATAGCATGCTT+GGG | + | chr4.1:5082121-5082140 | MS.gene06026:CDS | 40.0% |
!! | ATTGTCTGTTGATTTGCAGG+GGG | + | chr4.1:5079936-5079955 | MS.gene06026:intron | 40.0% |
!! | ATTGTTTTTCCAGTTCCAGG+AGG | - | chr4.1:5081949-5081968 | None:intergenic | 40.0% |
!! | CATCTTTGTCACCCACTTTT+TGG | + | chr4.1:5082403-5082422 | MS.gene06026:intron | 40.0% |
!! | GGATCAAGCTCTAAAATCTG+AGG | + | chr4.1:5081221-5081240 | MS.gene06026:CDS | 40.0% |
!! | GGTATTGTCTGTTGATTTGC+AGG | + | chr4.1:5079933-5079952 | MS.gene06026:intron | 40.0% |
!!! | GAGGTGTGTCAATTAGCTTT+TGG | + | chr4.1:5082308-5082327 | MS.gene06026:intron | 40.0% |
!!! | TCTGCTTCAGCCTTTTTTAC+TGG | - | chr4.1:5081429-5081448 | None:intergenic | 40.0% |
AAAATGCACAGGCAAAGCAG+TGG | + | chr4.1:5079808-5079827 | MS.gene06026:CDS | 45.0% | |
AATGAGCTGTATGGAGAAGG+TGG | + | chr4.1:5083612-5083631 | MS.gene06026:CDS | 45.0% | |
ACAACAGTTTCTACCACGCT+CGG | - | chr4.1:5081357-5081376 | None:intergenic | 45.0% | |
ACCATGACAGACGGATATAC+CGG | + | chr4.1:5082896-5082915 | MS.gene06026:CDS | 45.0% | |
CCTGCATATTCAATGGCCTA+AGG | - | chr4.1:5083515-5083534 | None:intergenic | 45.0% | |
CCTTAGGCCATTGAATATGC+AGG | + | chr4.1:5083512-5083531 | MS.gene06026:CDS | 45.0% | |
CGCGAACCAAGAATCAGAAT+TGG | - | chr4.1:5080702-5080721 | None:intergenic | 45.0% | |
CTGGAAGTCTCAATTGGAAG+AGG | + | chr4.1:5080830-5080849 | MS.gene06026:CDS | 45.0% | |
CTTATCACGATAAGCGCTTG+TGG | + | chr4.1:5083101-5083120 | MS.gene06026:intron | 45.0% | |
GAACATAAAGATTCCGAGCG+TGG | + | chr4.1:5081341-5081360 | MS.gene06026:intron | 45.0% | |
GACTACCATCTGTTGAGAAC+AGG | + | chr4.1:5082804-5082823 | MS.gene06026:CDS | 45.0% | |
GCTATGATTGCTGCAGATTC+AGG | + | chr4.1:5079250-5079269 | MS.gene06026:intron | 45.0% | |
GTCCAAGAACAACTAATCCG+GGG | - | chr4.1:5078640-5078659 | None:intergenic | 45.0% | |
TAGTAATGCTTCCCCTACGA+AGG | + | chr4.1:5081866-5081885 | MS.gene06026:CDS | 45.0% | |
TCACAAAGGGAGGAACCTAA+AGG | + | chr4.1:5079489-5079508 | MS.gene06026:CDS | 45.0% | |
TGATAACAGTGAGCAGACAC+GGG | + | chr4.1:5078266-5078285 | MS.gene06026:intron | 45.0% | |
TGGAATGAGCTGTATGGAGA+AGG | + | chr4.1:5083609-5083628 | MS.gene06026:CDS | 45.0% | |
TGTATGGAGAAGGTGGTTCT+AGG | + | chr4.1:5083619-5083638 | MS.gene06026:CDS | 45.0% | |
TGTCAGCTGGAAGTCTCAAT+TGG | + | chr4.1:5080824-5080843 | MS.gene06026:CDS | 45.0% | |
TGTTGTGAAACCAGCAGTGA+AGG | + | chr4.1:5081371-5081390 | MS.gene06026:CDS | 45.0% | |
TTCTATAGAGGGACACCTGA+TGG | - | chr4.1:5082535-5082554 | None:intergenic | 45.0% | |
TTGGGCAACGAACAAGAGTT+GGG | + | chr4.1:5082139-5082158 | MS.gene06026:CDS | 45.0% | |
! | GAGAGTTGATTCAGCAAGAG+AGG | + | chr4.1:5083263-5083282 | MS.gene06026:CDS | 45.0% |
! | GGCTTTGGCTCATTACTTTG+AGG | + | chr4.1:5079110-5079129 | MS.gene06026:CDS | 45.0% |
! | TGTGCACAACTGCTGCTTAT+CGG | + | chr4.1:5083233-5083252 | MS.gene06026:CDS | 45.0% |
!! | CGGATTAGTTGTTCTTGGAC+TGG | + | chr4.1:5078640-5078659 | MS.gene06026:intron | 45.0% |
!! | GATGAGGTTGATAGCATGCT+TGG | + | chr4.1:5082120-5082139 | MS.gene06026:CDS | 45.0% |
!! | TTGTCTGTTGATTTGCAGGG+GGG | + | chr4.1:5079937-5079956 | MS.gene06026:intron | 45.0% |
!!! | AGGTTTTTTCGGCCTTGTTC+TGG | + | chr4.1:5079597-5079616 | MS.gene06026:intron | 45.0% |
!!! | GAAGCTTTTGATGGTGGAAC+CGG | - | chr4.1:5081489-5081508 | None:intergenic | 45.0% |
AAGGCCATTGCAAAGGAAGC+TGG | + | chr4.1:5081976-5081995 | MS.gene06026:CDS | 50.0% | |
AGTCCTCCAGTGAAAAGGTC+TGG | - | chr4.1:5081892-5081911 | None:intergenic | 50.0% | |
CTTGGGCAACGAACAAGAGT+TGG | + | chr4.1:5082138-5082157 | MS.gene06026:CDS | 50.0% | |
GAATGGGTGAGCTGACACAA+TGG | + | chr4.1:5083589-5083608 | MS.gene06026:CDS | 50.0% | |
GCAAGAGAGGTTAAAGGACC+TGG | + | chr4.1:5083276-5083295 | MS.gene06026:CDS | 50.0% | |
GCTTGCAGCAACCTGATTCT+TGG | - | chr4.1:5083550-5083569 | None:intergenic | 50.0% | |
GTAATCCTCCAAAGCTCCGT+AGG | + | chr4.1:5079972-5079991 | MS.gene06026:CDS | 50.0% | |
TCAACTTCAGTGGCAAAGGC+AGG | + | chr4.1:5081453-5081472 | MS.gene06026:CDS | 50.0% | |
TCCGGTATATCCGTCTGTCA+TGG | - | chr4.1:5082900-5082919 | None:intergenic | 50.0% | |
TGAGGCCAAGTTGCTTCTCT+TGG | + | chr4.1:5079128-5079147 | MS.gene06026:CDS | 50.0% | |
TGCGCTTCAAAGGAGCTGAA+CGG | - | chr4.1:5080381-5080400 | None:intergenic | 50.0% | |
TGCTCCAGCTTCCTTTGCAA+TGG | - | chr4.1:5081983-5082002 | None:intergenic | 50.0% | |
TGGGCAACGAACAAGAGTTG+GGG | + | chr4.1:5082140-5082159 | MS.gene06026:CDS | 50.0% | |
TGTGAAACCAGCAGTGAAGG+CGG | + | chr4.1:5081374-5081393 | MS.gene06026:CDS | 50.0% | |
TTACCAACAGGTGCTTGCCA+AGG | + | chr4.1:5079089-5079108 | MS.gene06026:CDS | 50.0% | |
TTATTTGGGCCTCCTGGAAC+TGG | + | chr4.1:5081937-5081956 | MS.gene06026:CDS | 50.0% | |
! | AAAAGGTCTGGCCTTCGTAG+GGG | - | chr4.1:5081880-5081899 | None:intergenic | 50.0% |
! | GAAAAGGTCTGGCCTTCGTA+GGG | - | chr4.1:5081881-5081900 | None:intergenic | 50.0% |
! | GAAGCATTCCTACGGAGCTT+TGG | - | chr4.1:5079983-5080002 | None:intergenic | 50.0% |
! | TGAAAAGGTCTGGCCTTCGT+AGG | - | chr4.1:5081882-5081901 | None:intergenic | 50.0% |
!! | GGACTTCTAAAACCATGCCG+AGG | + | chr4.1:5081907-5081926 | MS.gene06026:CDS | 50.0% |
!! | GGTTCGCGAGTTCTAGATTC+TGG | + | chr4.1:5080714-5080733 | MS.gene06026:CDS | 50.0% |
!! | GTCCCCGGATTAGTTGTTCT+TGG | + | chr4.1:5078635-5078654 | MS.gene06026:intron | 50.0% |
AAGCCTTGGCAAGCACCTGT+TGG | - | chr4.1:5079095-5079114 | None:intergenic | 55.0% | |
ACAGGTGCTTGCCAAGGCTT+TGG | + | chr4.1:5079095-5079114 | MS.gene06026:CDS | 55.0% | |
ACTGGAGCAGCACTTTCAGC+AGG | - | chr4.1:5081411-5081430 | None:intergenic | 55.0% | |
ATTCTTCTCTCTGGCCCTGC+TGG | + | chr4.1:5078375-5078394 | MS.gene06026:CDS | 55.0% | |
GAACTCGCGACCATGACAGA+CGG | + | chr4.1:5082887-5082906 | MS.gene06026:CDS | 55.0% | |
GCACAGGCAAAGCAGTGGAA+TGG | + | chr4.1:5079813-5079832 | MS.gene06026:CDS | 55.0% | |
GCTGGCAAAGGCCATTGCAA+AGG | + | chr4.1:5081969-5081988 | MS.gene06026:CDS | 55.0% | |
! | AGGCCAGACCTTTTCACTGG+AGG | + | chr4.1:5081886-5081905 | MS.gene06026:CDS | 55.0% |
! | CGAAGGCCAGACCTTTTCAC+TGG | + | chr4.1:5081883-5081902 | MS.gene06026:CDS | 55.0% |
! | GACGGGCTCACGACAAAACA+AGG | + | chr4.1:5082210-5082229 | MS.gene06026:CDS | 55.0% |
! | GCATTCCTACGGAGCTTTGG+AGG | - | chr4.1:5079980-5079999 | None:intergenic | 55.0% |
! | TTGGGGAGCATGAAGCCATG+CGG | + | chr4.1:5082157-5082176 | MS.gene06026:CDS | 55.0% |
CAGCTGGCTGTGCGCTTCAA+AGG | - | chr4.1:5080391-5080410 | None:intergenic | 60.0% | |
CTCACCCATTCCAGCTCCCT+CGG | - | chr4.1:5083580-5083599 | None:intergenic | 60.0% | |
GCAGCACTTTCAGCAGGAGG+AGG | - | chr4.1:5081405-5081424 | None:intergenic | 60.0% | |
GCTGCAAGCTTCTCTGCCGA+GGG | + | chr4.1:5083561-5083580 | MS.gene06026:CDS | 60.0% | |
GGACTTTCCGCCTTCACTGC+TGG | - | chr4.1:5081384-5081403 | None:intergenic | 60.0% | |
GGAGCAGCACTTTCAGCAGG+AGG | - | chr4.1:5081408-5081427 | None:intergenic | 60.0% | |
TCTGCCGAGGGAGCTGGAAT+GGG | + | chr4.1:5083573-5083592 | MS.gene06026:CDS | 60.0% | |
TGCTGCAAGCTTCTCTGCCG+AGG | + | chr4.1:5083560-5083579 | MS.gene06026:CDS | 60.0% | |
TGTCGTGAGCCCGTCCCAAT+GGG | - | chr4.1:5082205-5082224 | None:intergenic | 60.0% | |
TTGTCGTGAGCCCGTCCCAA+TGG | - | chr4.1:5082206-5082225 | None:intergenic | 60.0% | |
!! | CTTTGAAGCGCACAGCCAGC+TGG | + | chr4.1:5080389-5080408 | MS.gene06026:CDS | 60.0% |
AGCTTCTCTGCCGAGGGAGC+TGG | + | chr4.1:5083567-5083586 | MS.gene06026:CDS | 65.0% | |
CTCTGCCGAGGGAGCTGGAA+TGG | + | chr4.1:5083572-5083591 | MS.gene06026:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 5078083 | 5083671 | 5078083 | ID=MS.gene06026 |
chr4.1 | mRNA | 5078083 | 5083671 | 5078083 | ID=MS.gene06026.t1;Parent=MS.gene06026 |
chr4.1 | exon | 5078083 | 5078150 | 5078083 | ID=MS.gene06026.t1.exon1;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5078083 | 5078150 | 5078083 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5078275 | 5078396 | 5078275 | ID=MS.gene06026.t1.exon2;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5078275 | 5078396 | 5078275 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5079085 | 5079173 | 5079085 | ID=MS.gene06026.t1.exon3;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5079085 | 5079173 | 5079085 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5079266 | 5079301 | 5079266 | ID=MS.gene06026.t1.exon4;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5079266 | 5079301 | 5079266 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5079417 | 5079510 | 5079417 | ID=MS.gene06026.t1.exon5;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5079417 | 5079510 | 5079417 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5079806 | 5079848 | 5079806 | ID=MS.gene06026.t1.exon6;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5079806 | 5079848 | 5079806 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5079955 | 5080055 | 5079955 | ID=MS.gene06026.t1.exon7;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5079955 | 5080055 | 5079955 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5080386 | 5080450 | 5080386 | ID=MS.gene06026.t1.exon8;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5080386 | 5080450 | 5080386 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5080576 | 5081072 | 5080576 | ID=MS.gene06026.t1.exon9;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5080576 | 5081072 | 5080576 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5081155 | 5081242 | 5081155 | ID=MS.gene06026.t1.exon10;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5081155 | 5081242 | 5081155 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5081351 | 5081509 | 5081351 | ID=MS.gene06026.t1.exon11;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5081351 | 5081509 | 5081351 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5081742 | 5082310 | 5081742 | ID=MS.gene06026.t1.exon12;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5081742 | 5082310 | 5081742 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5082793 | 5082931 | 5082793 | ID=MS.gene06026.t1.exon13;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5082793 | 5082931 | 5082793 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5083229 | 5083297 | 5083229 | ID=MS.gene06026.t1.exon14;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5083229 | 5083297 | 5083229 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
chr4.1 | exon | 5083396 | 5083671 | 5083396 | ID=MS.gene06026.t1.exon15;Parent=MS.gene06026.t1 |
chr4.1 | CDS | 5083396 | 5083671 | 5083396 | ID=cds.MS.gene06026.t1;Parent=MS.gene06026.t1 |
Gene Sequence |
Protein sequence |