Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89801.t1 | XP_013448963.1 | 94.7 | 683 | 35 | 1 | 1 | 683 | 1 | 682 | 0.00E+00 | 1300 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89801.t1 | P0C7P8 | 28.5 | 751 | 432 | 23 | 5 | 676 | 4 | 728 | 2.1e-54 | 215.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89801.t1 | A0A072UAY4 | 94.7 | 683 | 35 | 1 | 1 | 683 | 1 | 682 | 0.0e+00 | 1300.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049603 | MS.gene89801 | 0.802434 | 5.62E-49 | -1.69E-46 |
| MS.gene051367 | MS.gene89801 | 0.80601 | 1.01E-49 | -1.69E-46 |
| MS.gene055204 | MS.gene89801 | 0.972393 | 1.08E-134 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89801.t1 | MTR_7g063470 | 94.729 | 683 | 35 | 1 | 1 | 683 | 1 | 682 | 0.0 | 1320 |
| MS.gene89801.t1 | MTR_7g063470 | 94.313 | 633 | 35 | 1 | 51 | 683 | 1 | 632 | 0.0 | 1211 |
| MS.gene89801.t1 | MTR_4g051565 | 35.783 | 313 | 175 | 8 | 385 | 676 | 499 | 806 | 1.89e-44 | 171 |
| MS.gene89801.t1 | MTR_4g051565 | 35.783 | 313 | 175 | 8 | 385 | 676 | 587 | 894 | 2.66e-44 | 171 |
| MS.gene89801.t1 | MTR_4g051565 | 29.630 | 189 | 107 | 5 | 6 | 181 | 5 | 180 | 1.37e-17 | 87.8 |
| MS.gene89801.t1 | MTR_2g087295 | 46.111 | 180 | 94 | 2 | 500 | 676 | 676 | 855 | 1.62e-43 | 168 |
| MS.gene89801.t1 | MTR_2g087295 | 27.528 | 178 | 112 | 5 | 6 | 171 | 5 | 177 | 1.33e-13 | 75.1 |
| MS.gene89801.t1 | MTR_7g096650 | 36.304 | 303 | 153 | 8 | 387 | 676 | 186 | 461 | 1.40e-40 | 155 |
| MS.gene89801.t1 | MTR_1g070180 | 45.213 | 188 | 94 | 4 | 498 | 676 | 472 | 659 | 2.89e-40 | 157 |
| MS.gene89801.t1 | MTR_1g070180 | 33.333 | 183 | 80 | 4 | 3 | 175 | 2 | 152 | 1.80e-23 | 105 |
| MS.gene89801.t1 | MTR_7g096650 | 36.304 | 303 | 153 | 8 | 387 | 676 | 362 | 637 | 8.27e-40 | 155 |
| MS.gene89801.t1 | MTR_7g096650 | 30.986 | 142 | 81 | 4 | 5 | 141 | 4 | 133 | 1.10e-13 | 74.7 |
| MS.gene89801.t1 | MTR_7g096650 | 36.304 | 303 | 153 | 8 | 387 | 676 | 382 | 657 | 8.39e-40 | 156 |
| MS.gene89801.t1 | MTR_7g096650 | 32.955 | 176 | 101 | 4 | 5 | 175 | 4 | 167 | 1.26e-16 | 84.3 |
| MS.gene89801.t1 | MTR_1g077640 | 41.011 | 178 | 95 | 3 | 508 | 676 | 573 | 749 | 8.30e-35 | 141 |
| MS.gene89801.t1 | MTR_1g018810 | 37.736 | 106 | 58 | 3 | 82 | 181 | 97 | 200 | 4.30e-14 | 74.3 |
| MS.gene89801.t1 | MTR_2g078750 | 29.379 | 177 | 110 | 5 | 5 | 175 | 19 | 186 | 1.17e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89801.t1 | AT2G31280 | 28.710 | 721 | 386 | 28 | 5 | 658 | 30 | 689 | 5.65e-51 | 189 |
| MS.gene89801.t1 | AT2G31280 | 36.517 | 356 | 189 | 14 | 334 | 680 | 390 | 717 | 5.19e-45 | 172 |
| MS.gene89801.t1 | AT2G31280 | 35.795 | 176 | 72 | 5 | 8 | 175 | 7 | 149 | 3.68e-20 | 95.9 |
| MS.gene89801.t1 | AT2G31280 | 35.121 | 373 | 188 | 14 | 334 | 680 | 390 | 734 | 1.68e-43 | 167 |
| MS.gene89801.t1 | AT2G31280 | 35.795 | 176 | 72 | 5 | 8 | 175 | 7 | 149 | 4.19e-20 | 95.5 |
| MS.gene89801.t1 | AT1G06150 | 45.856 | 181 | 93 | 3 | 501 | 676 | 548 | 728 | 1.22e-40 | 159 |
| MS.gene89801.t1 | AT1G06150 | 36.257 | 171 | 91 | 4 | 5 | 175 | 4 | 156 | 4.54e-23 | 105 |
| MS.gene89801.t1 | AT1G06150 | 45.355 | 183 | 93 | 3 | 501 | 676 | 548 | 730 | 1.39e-40 | 159 |
| MS.gene89801.t1 | AT1G06150 | 36.257 | 171 | 91 | 4 | 5 | 175 | 4 | 156 | 4.48e-23 | 105 |
| MS.gene89801.t1 | AT2G27230 | 37.415 | 294 | 153 | 9 | 389 | 676 | 352 | 620 | 3.75e-40 | 157 |
| MS.gene89801.t1 | AT2G27230 | 30.769 | 169 | 97 | 5 | 6 | 171 | 5 | 156 | 3.94e-17 | 85.9 |
| MS.gene89801.t1 | AT2G27230 | 37.415 | 294 | 153 | 9 | 389 | 676 | 352 | 620 | 3.75e-40 | 157 |
| MS.gene89801.t1 | AT2G27230 | 30.769 | 169 | 97 | 5 | 6 | 171 | 5 | 156 | 3.94e-17 | 85.9 |
| MS.gene89801.t1 | AT1G64625 | 41.304 | 184 | 96 | 3 | 495 | 676 | 320 | 493 | 5.69e-38 | 148 |
| MS.gene89801.t1 | AT1G64625 | 41.304 | 184 | 96 | 3 | 495 | 676 | 334 | 507 | 6.61e-38 | 148 |
| MS.gene89801.t1 | AT1G64625 | 33.096 | 281 | 154 | 6 | 398 | 676 | 269 | 517 | 7.27e-38 | 148 |
| MS.gene89801.t1 | AT1G64625 | 46.154 | 78 | 42 | 0 | 495 | 572 | 334 | 411 | 3.67e-17 | 85.1 |
| MS.gene89801.t1 | AT3G15240 | 27.419 | 186 | 97 | 4 | 10 | 175 | 38 | 205 | 2.93e-11 | 66.2 |
Find 148 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCATCTTGAAAGGGATTT+TGG | 0.115506 | 7.3:+41791371 | MS.gene89801:CDS |
| TCATCTTTCAATGGCAATTC+AGG | 0.257213 | 7.3:+41790220 | MS.gene89801:CDS |
| ATTGAATTTCTCGTTGATAT+TGG | 0.272833 | 7.3:-41789327 | None:intergenic |
| TGTTCCCTCAATGGCTGAAT+TGG | 0.281284 | 7.3:+41789808 | MS.gene89801:CDS |
| GAAAACTTTGGTCCACTAAT+AGG | 0.282150 | 7.3:-41790292 | None:intergenic |
| CTCGAAGAATATACATCATC+TGG | 0.293603 | 7.3:-41787927 | None:intergenic |
| AACTCTATCGCATTATTTGA+TGG | 0.303118 | 7.3:+41789421 | MS.gene89801:CDS |
| ACAGCATCCAAGAGATATTC+TGG | 0.323266 | 7.3:-41789983 | None:intergenic |
| TCAAATGCGCAGCTTCTTCC+TGG | 0.324435 | 7.3:-41790879 | None:intergenic |
| GGTCCACTAATAGGCTTCAT+AGG | 0.331664 | 7.3:-41790283 | None:intergenic |
| TAAGTACATCATGTGCTTTA+CGG | 0.335446 | 7.3:-41790553 | None:intergenic |
| ATTCAATTTCATTCATCGTT+TGG | 0.351030 | 7.3:+41789343 | MS.gene89801:CDS |
| CAGAAAAGTAATCAGCCTTT+GGG | 0.356079 | 7.3:+41787873 | MS.gene89801:CDS |
| TGGCTTCTTCAATTTGCATC+TGG | 0.357988 | 7.3:+41788403 | MS.gene89801:CDS |
| AGAGAAGGAACTGATGATTC+AGG | 0.361342 | 7.3:+41787948 | MS.gene89801:CDS |
| TCTTCATCTGAGATATATTT+CGG | 0.368517 | 7.3:-41789878 | None:intergenic |
| TCATTTGAGACAAAACATAT+TGG | 0.369387 | 7.3:+41789587 | MS.gene89801:CDS |
| GTCTCGTCGCAAATACAGTT+TGG | 0.371269 | 7.3:+41788004 | MS.gene89801:CDS |
| CCAGAAAAGTAATCAGCCTT+TGG | 0.374968 | 7.3:+41787872 | MS.gene89801:CDS |
| CTTTCTTCAGAATTGATTTG+TGG | 0.382325 | 7.3:-41790106 | None:intergenic |
| GCCTATAGTCATAGAAGATC+TGG | 0.383505 | 7.3:+41790923 | MS.gene89801:CDS |
| CTTCTCCATTGTTCCCTCAA+TGG | 0.383886 | 7.3:+41789799 | MS.gene89801:CDS |
| CATTGAAAGATGATAGAAAC+TGG | 0.394401 | 7.3:-41790210 | None:intergenic |
| TTCAATTACACAATTGTTGA+AGG | 0.394878 | 7.3:+41787155 | MS.gene89801:CDS |
| GTCGACAATGATGGACAGTT+TGG | 0.395511 | 7.3:+41789668 | MS.gene89801:CDS |
| TATTCTGGATGAATTCCTTC+AGG | 0.401336 | 7.3:-41789968 | None:intergenic |
| CATGTAGATCCAACAGTGTT+AGG | 0.402173 | 7.3:+41790041 | MS.gene89801:CDS |
| CGTTGATGTATTTATATTGA+AGG | 0.413499 | 7.3:-41789477 | None:intergenic |
| TGATATTGGTAATAAATTCC+AGG | 0.413573 | 7.3:-41789313 | None:intergenic |
| AATGGCACTATGCTGTCTTT+TGG | 0.418476 | 7.3:+41787196 | MS.gene89801:CDS |
| TGGGAACTGATTCTCAAGAT+TGG | 0.424555 | 7.3:+41789390 | MS.gene89801:CDS |
| ATCACTTGGTAGAAGAGATA+TGG | 0.429697 | 7.3:+41789630 | MS.gene89801:CDS |
| TGATGAGGCGCCACAGGAAA+AGG | 0.435741 | 7.3:+41790252 | MS.gene89801:CDS |
| TGATCTTATGCCTGAGCTTA+CGG | 0.436796 | 7.3:+41790162 | MS.gene89801:CDS |
| AACGATGAAACAAGCCCAAC+TGG | 0.441214 | 7.3:-41791409 | None:intergenic |
| TTCCCCATGGCCGTAAGCTC+AGG | 0.441807 | 7.3:-41790172 | None:intergenic |
| TACCATTCTTTCAGGGCTGT+TGG | 0.445234 | 7.3:+41788185 | MS.gene89801:intron |
| TAATTGTCAACCATTGAACT+TGG | 0.447007 | 7.3:+41789370 | MS.gene89801:CDS |
| CTTAAGAATGGTAACAAGTC+AGG | 0.449470 | 7.3:+41790572 | MS.gene89801:CDS |
| AAAATAGATGGCAGCCATCC+AGG | 0.450256 | 7.3:+41790861 | MS.gene89801:CDS |
| ATACTTACCCTTCCACCATC+GGG | 0.451103 | 7.3:-41790418 | None:intergenic |
| TGCTCAAGTGATCCGAAGGC+TGG | 0.453930 | 7.3:+41791344 | MS.gene89801:CDS |
| CGCAAATACAGTTTGGGAGA+AGG | 0.454810 | 7.3:+41788011 | MS.gene89801:CDS |
| TCCAGATCTTCTATGACTAT+AGG | 0.457765 | 7.3:-41790924 | None:intergenic |
| CAGTTTCTATCATCTTTCAA+TGG | 0.458798 | 7.3:+41790211 | MS.gene89801:CDS |
| ATCAGCCTTTGGGGAGTATG+TGG | 0.460271 | 7.3:+41787883 | MS.gene89801:CDS |
| AGGAAAAGGCAGAAAATAGA+TGG | 0.461681 | 7.3:+41790849 | MS.gene89801:CDS |
| AATCCTATGAAGCCTATTAG+TGG | 0.461782 | 7.3:+41790280 | MS.gene89801:CDS |
| AAGAAGCTGCGCATTTGACT+TGG | 0.466646 | 7.3:+41790884 | MS.gene89801:CDS |
| TCTCGTCGCAAATACAGTTT+GGG | 0.467945 | 7.3:+41788005 | MS.gene89801:CDS |
| GAATCAGTTCCCAAGTTCAA+TGG | 0.471934 | 7.3:-41789380 | None:intergenic |
| TCAGCCTTTGGGGAGTATGT+GGG | 0.473397 | 7.3:+41787884 | MS.gene89801:CDS |
| GACAAAACATATTGGTTATG+TGG | 0.475296 | 7.3:+41789595 | MS.gene89801:CDS |
| ATGATCAATTGTCTATCTCT+TGG | 0.477190 | 7.3:-41790364 | None:intergenic |
| TGGATAGGATGAAGGAGTTG+AGG | 0.477225 | 7.3:+41790386 | MS.gene89801:CDS |
| GGGTCAGCTTTCTATGAGAC+AGG | 0.477956 | 7.3:-41791595 | None:intergenic |
| ATAGAAGATCTGGAATCCTC+AGG | 0.479558 | 7.3:+41790933 | MS.gene89801:CDS |
| TACAGGTACCTGAAAGGAAA+AGG | 0.483460 | 7.3:+41790835 | MS.gene89801:intron |
| AAAACTCCTTGTGGAAGAAC+AGG | 0.485224 | 7.3:-41788810 | None:intergenic |
| ACTTGGAAAGTGAACTATCA+TGG | 0.488551 | 7.3:+41790901 | MS.gene89801:CDS |
| GTTGATTGATGAGGCGCCAC+AGG | 0.490522 | 7.3:+41790246 | MS.gene89801:CDS |
| TCAATTTGCATCTGGCATCA+AGG | 0.490960 | 7.3:+41788411 | MS.gene89801:CDS |
| ATGCCTGAGCTTACGGCCAT+GGG | 0.493465 | 7.3:+41790169 | MS.gene89801:CDS |
| TTCCAAAATCCCTTTCAAGA+TGG | 0.494487 | 7.3:-41791373 | None:intergenic |
| ATTATGACCGAGCAACTACT+TGG | 0.495159 | 7.3:+41789728 | MS.gene89801:CDS |
| GACAACTCATAGTCATCCTT+AGG | 0.495626 | 7.3:-41789506 | None:intergenic |
| TATGCCTGAGCTTACGGCCA+TGG | 0.499536 | 7.3:+41790168 | MS.gene89801:CDS |
| AGATGGTAATGTCCAGCCTT+CGG | 0.502070 | 7.3:-41791356 | None:intergenic |
| GGATAGGATGAAGGAGTTGA+GGG | 0.503131 | 7.3:+41790387 | MS.gene89801:CDS |
| AGCTGCAAAAGATGCAGTAA+AGG | 0.507015 | 7.3:-41791562 | None:intergenic |
| TCAATTACACAATTGTTGAA+GGG | 0.509569 | 7.3:+41787156 | MS.gene89801:CDS |
| AATTGAAGAAGCCACTCATC+CGG | 0.511721 | 7.3:-41788394 | None:intergenic |
| CAGCCTTTGGGGAGTATGTG+GGG | 0.512227 | 7.3:+41787885 | MS.gene89801:CDS |
| AAACCGTTCGAGTACCAGTT+GGG | 0.512289 | 7.3:+41791395 | MS.gene89801:CDS |
| AATTCATCCAGAATATCTCT+TGG | 0.512402 | 7.3:+41789976 | MS.gene89801:CDS |
| GCACATGATGTACTTAAGAA+TGG | 0.515234 | 7.3:+41790560 | MS.gene89801:CDS |
| CTGGACATTACCATCTTGAA+AGG | 0.517528 | 7.3:+41791363 | MS.gene89801:CDS |
| AACTTATCCCCGATGGTGGA+AGG | 0.519781 | 7.3:+41790410 | MS.gene89801:CDS |
| GATTTGTGGCTGAACGGAGC+CGG | 0.520965 | 7.3:-41790092 | None:intergenic |
| ACCGCCTCCAAGTAGTTGCT+CGG | 0.521574 | 7.3:-41789735 | None:intergenic |
| TCCTCCAGTGTCCGGATGAG+TGG | 0.523699 | 7.3:+41788383 | MS.gene89801:intron |
| GCAAATACAGTTTGGGAGAA+GGG | 0.529080 | 7.3:+41788012 | MS.gene89801:CDS |
| AAGAGATAGACAATTGATCA+TGG | 0.530468 | 7.3:+41790366 | MS.gene89801:CDS |
| TATCTCTTGGATGCTGTTGT+CGG | 0.530560 | 7.3:+41789989 | MS.gene89801:CDS |
| ATGATGGACAGTTTGGAGAC+AGG | 0.530848 | 7.3:+41789675 | MS.gene89801:CDS |
| TATATGAGACCTAACACTGT+TGG | 0.533358 | 7.3:-41790050 | None:intergenic |
| CAGTTTGGAGACAGGTCGAA+TGG | 0.534042 | 7.3:+41789683 | MS.gene89801:CDS |
| TCTCACTTTGTCGACAATGA+TGG | 0.534394 | 7.3:+41789659 | MS.gene89801:CDS |
| TTGTTCGCGCTAGAAAACTT+TGG | 0.535137 | 7.3:-41790304 | None:intergenic |
| ATTGATCATGGATAGGATGA+AGG | 0.536115 | 7.3:+41790378 | MS.gene89801:CDS |
| TCCGTTGCATATAGACAGAC+AGG | 0.539556 | 7.3:+41789845 | MS.gene89801:CDS |
| AATACTTACCCTTCCACCAT+CGG | 0.539762 | 7.3:-41790419 | None:intergenic |
| GCTGAATTGGACAAAGCGAT+TGG | 0.541666 | 7.3:+41789821 | MS.gene89801:CDS |
| GATGTATATTCTTCGAGAGA+AGG | 0.545343 | 7.3:+41787933 | MS.gene89801:CDS |
| GCAATTTGCTTCATTTAACT+CGG | 0.547795 | 7.3:+41788833 | MS.gene89801:CDS |
| TTCAGGCTTGTTGATTGATG+AGG | 0.547800 | 7.3:+41790237 | MS.gene89801:CDS |
| GTGTAGCATTGATAACCTCT+TGG | 0.550518 | 7.3:+41790524 | MS.gene89801:intron |
| ATAATAGGTTGCTGAAGACC+TGG | 0.551304 | 7.3:+41789295 | MS.gene89801:intron |
| CTCAGGGAACATGCTCATAG+AGG | 0.551708 | 7.3:+41790950 | MS.gene89801:CDS |
| ACCAGTGAAAATATCCTCAC+AGG | 0.552567 | 7.3:-41788243 | None:intergenic |
| TGAAAATTCATCGTTCCCCA+TGG | 0.553208 | 7.3:-41790185 | None:intergenic |
| AAAGAACTTACATTGGAGAA+AGG | 0.554540 | 7.3:-41787230 | None:intergenic |
| TGGACATTACCATCTTGAAA+GGG | 0.555810 | 7.3:+41791364 | MS.gene89801:CDS |
| CTGGTACCTGTTCTTCCACA+AGG | 0.556911 | 7.3:+41788804 | MS.gene89801:CDS |
| TTGTCCAATTCAGCCATTGA+GGG | 0.558959 | 7.3:-41789812 | None:intergenic |
| ATGCGCAGCTTCTTCCTGGA+TGG | 0.560508 | 7.3:-41790875 | None:intergenic |
| TCGAAGAATATACATCATCT+GGG | 0.561592 | 7.3:-41787926 | None:intergenic |
| TTTGTCCAATTCAGCCATTG+AGG | 0.562528 | 7.3:-41789813 | None:intergenic |
| GCCTGTCTGTCTATATGCAA+CGG | 0.563319 | 7.3:-41789846 | None:intergenic |
| ATAGACAATTGATCATGGAT+AGG | 0.567082 | 7.3:+41790371 | MS.gene89801:CDS |
| AGAATTGATTTGTGGCTGAA+CGG | 0.572108 | 7.3:-41790098 | None:intergenic |
| TTGGGCTTGTTTCATCGTTG+AGG | 0.572928 | 7.3:+41791413 | MS.gene89801:CDS |
| TACATCAACGAGATTTCCTA+AGG | 0.576078 | 7.3:+41789490 | MS.gene89801:CDS |
| TTCAGCCATTGAGGGAACAA+TGG | 0.578242 | 7.3:-41789804 | None:intergenic |
| AAGAGCAAATGAAAATGAGA+TGG | 0.587644 | 7.3:+41789556 | MS.gene89801:CDS |
| TCCATCCTGTGAAAACCTCT+AGG | 0.589748 | 7.3:-41791529 | None:intergenic |
| ATGACCGAGCAACTACTTGG+AGG | 0.590156 | 7.3:+41789731 | MS.gene89801:CDS |
| AATTGTCAACCATTGAACTT+GGG | 0.593013 | 7.3:+41789371 | MS.gene89801:CDS |
| ACAATGCCATCAGAGTTTAC+CGG | 0.593338 | 7.3:+41790073 | MS.gene89801:CDS |
| ACGGAGCCGGTAAACTCTGA+TGG | 0.594101 | 7.3:-41790079 | None:intergenic |
| TGACACTAGTTTAATTCCTG+AGG | 0.594288 | 7.3:+41788271 | MS.gene89801:CDS |
| TGGATTTACAGGTACCTGAA+AGG | 0.594367 | 7.3:+41790829 | MS.gene89801:intron |
| TAGAAGATCTGGAATCCTCA+GGG | 0.603059 | 7.3:+41790934 | MS.gene89801:CDS |
| AAAAGTTTCGAGATTCCTGA+AGG | 0.603246 | 7.3:+41789953 | MS.gene89801:CDS |
| GCAAATTGCAAAACTCCTTG+TGG | 0.603269 | 7.3:-41788819 | None:intergenic |
| AGCCTTTGGGGAGTATGTGG+GGG | 0.607518 | 7.3:+41787886 | MS.gene89801:CDS |
| AAAACCGTTCGAGTACCAGT+TGG | 0.607874 | 7.3:+41791394 | MS.gene89801:CDS |
| AGGGAACTTATCCCCGATGG+TGG | 0.613042 | 7.3:+41790406 | MS.gene89801:CDS |
| CAGATGGTATGCAATGAGCA+TGG | 0.615053 | 7.3:+41791306 | MS.gene89801:intron |
| ACTTATCCCCGATGGTGGAA+GGG | 0.623871 | 7.3:+41790411 | MS.gene89801:CDS |
| TTGAGGGAACTTATCCCCGA+TGG | 0.624711 | 7.3:+41790403 | MS.gene89801:CDS |
| GGAGACAAAATCAAATCACT+TGG | 0.627377 | 7.3:+41789616 | MS.gene89801:CDS |
| ACCGAGCAACTACTTGGAGG+CGG | 0.630724 | 7.3:+41789734 | MS.gene89801:CDS |
| AGATTGCTCAAGTGATCCGA+AGG | 0.635542 | 7.3:+41791340 | MS.gene89801:CDS |
| TGACATGCACAGGTTCCTAG+AGG | 0.640850 | 7.3:+41791514 | MS.gene89801:intron |
| TCTACATGAAGTTTCGTCAG+AGG | 0.642228 | 7.3:-41790026 | None:intergenic |
| AAGCCCAACTGGTACTCGAA+CGG | 0.642948 | 7.3:-41791398 | None:intergenic |
| CTCTATGAGCATGTTCCCTG+AGG | 0.646774 | 7.3:-41790949 | None:intergenic |
| GCCTTTGGGGAGTATGTGGG+GGG | 0.650953 | 7.3:+41787887 | MS.gene89801:CDS |
| TGGCAAATTAGCTCTTGCCA+AGG | 0.654781 | 7.3:+41788205 | MS.gene89801:CDS |
| TTGTCGACAAAGTGAGACCA+TGG | 0.655875 | 7.3:-41789653 | None:intergenic |
| GAAACGATTTGCTGATCGTG+AGG | 0.656486 | 7.3:+41790605 | MS.gene89801:CDS |
| GCTTTACGGTTCGTTCCAAG+AGG | 0.657976 | 7.3:-41790539 | None:intergenic |
| TGGTAGAAGAGATATGGCCA+TGG | 0.663999 | 7.3:+41789636 | MS.gene89801:CDS |
| CGAAGAATATACATCATCTG+GGG | 0.676864 | 7.3:-41787925 | None:intergenic |
| TGCCTGAGCTTACGGCCATG+GGG | 0.687920 | 7.3:+41790170 | MS.gene89801:CDS |
| TACTTACCCTTCCACCATCG+GGG | 0.699528 | 7.3:-41790417 | None:intergenic |
| AGAAAAGTAATCAGCCTTTG+GGG | 0.712981 | 7.3:+41787874 | MS.gene89801:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATCAAAATAAATAGAAA+TGG | - | chr7.3:41788473-41788492 | None:intergenic | 15.0% |
| !! | TTCATATTACATGATATAAT+AGG | + | chr7.3:41789280-41789299 | MS.gene89801:intron | 15.0% |
| !!! | AAAATTTAAACGAAGTTTTA+AGG | - | chr7.3:41787620-41787639 | None:intergenic | 15.0% |
| !! | AACAAAAAAAGAGAAAAAGT+AGG | + | chr7.3:41790322-41790341 | MS.gene89801:CDS | 20.0% |
| !! | AATAATCAAATTACATGCAT+CGG | - | chr7.3:41787747-41787766 | None:intergenic | 20.0% |
| !! | ATTTAGTATATTTCAAAGCA+GGG | - | chr7.3:41788351-41788370 | None:intergenic | 20.0% |
| !! | TAACATACTAAACATGATAA+TGG | - | chr7.3:41787692-41787711 | None:intergenic | 20.0% |
| !! | TAGGTAATAAGAAAAATTCA+AGG | + | chr7.3:41790341-41790360 | MS.gene89801:CDS | 20.0% |
| !! | TATTTAGTATATTTCAAAGC+AGG | - | chr7.3:41788352-41788371 | None:intergenic | 20.0% |
| !! | TTAAAATGGTAAATTCTACT+CGG | - | chr7.3:41787489-41787508 | None:intergenic | 20.0% |
| !! | TTTATCACTTATGTGTATTA+TGG | + | chr7.3:41788123-41788142 | MS.gene89801:intron | 20.0% |
| !! | TTTGTGAAAAATTCAAATGT+TGG | + | chr7.3:41790136-41790155 | MS.gene89801:CDS | 20.0% |
| !!! | AACAATTTCGAAAGTATAAA+AGG | - | chr7.3:41790480-41790499 | None:intergenic | 20.0% |
| !!! | ACAATTTCGAAAGTATAAAA+GGG | - | chr7.3:41790479-41790498 | None:intergenic | 20.0% |
| !!! | AGAATTTACCATTTTAACTA+TGG | + | chr7.3:41787492-41787511 | MS.gene89801:intron | 20.0% |
| !!! | ATTTGAATTTTTCACAAATG+CGG | - | chr7.3:41790134-41790153 | None:intergenic | 20.0% |
| !!! | TAAATTTTTTCTGCTTTTGT+TGG | + | chr7.3:41787632-41787651 | MS.gene89801:intron | 20.0% |
| !!! | TTATATTAGATTCTAGCTTA+TGG | - | chr7.3:41790735-41790754 | None:intergenic | 20.0% |
| !!! | TTTTTATTTTCATTATGAGC+TGG | + | chr7.3:41788869-41788888 | MS.gene89801:intron | 20.0% |
| ! | ATAATCAAATTACATGCATC+GGG | - | chr7.3:41787746-41787765 | None:intergenic | 25.0% |
| ! | ATGGAAATTGGTATGTAATT+TGG | - | chr7.3:41788657-41788676 | None:intergenic | 25.0% |
| ! | ATGTGTTGTATGAAATTTGT+TGG | + | chr7.3:41787776-41787795 | MS.gene89801:intron | 25.0% |
| ! | ATTCAATTTCATTCATCGTT+TGG | + | chr7.3:41789343-41789362 | MS.gene89801:CDS | 25.0% |
| ! | ATTGAATTTCTCGTTGATAT+TGG | - | chr7.3:41789330-41789349 | None:intergenic | 25.0% |
| ! | CAAATTGAAGGTAATATGTA+AGG | - | chr7.3:41788972-41788991 | None:intergenic | 25.0% |
| ! | CGTTGATGTATTTATATTGA+AGG | - | chr7.3:41789480-41789499 | None:intergenic | 25.0% |
| ! | CTTACATATTACCTTCAATT+TGG | + | chr7.3:41788970-41788989 | MS.gene89801:intron | 25.0% |
| ! | TCAATTACACAATTGTTGAA+GGG | + | chr7.3:41787156-41787175 | MS.gene89801:CDS | 25.0% |
| ! | TTCAATTACACAATTGTTGA+AGG | + | chr7.3:41787155-41787174 | MS.gene89801:CDS | 25.0% |
| !! | AATATTTCTGCAAATTACGA+AGG | + | chr7.3:41788730-41788749 | MS.gene89801:intron | 25.0% |
| !! | ATATTTCTGCAAATTACGAA+GGG | + | chr7.3:41788731-41788750 | MS.gene89801:intron | 25.0% |
| !! | ATTTTCATTTGCTCTTTTGA+GGG | - | chr7.3:41789552-41789571 | None:intergenic | 25.0% |
| !! | GATTTCTTCCTTATAGTTTT+CGG | + | chr7.3:41788995-41789014 | MS.gene89801:intron | 25.0% |
| !! | TCATTTGAGACAAAACATAT+TGG | + | chr7.3:41789587-41789606 | MS.gene89801:CDS | 25.0% |
| !! | TCTTCATCTGAGATATATTT+CGG | - | chr7.3:41789881-41789900 | None:intergenic | 25.0% |
| !! | TGATATTGGTAATAAATTCC+AGG | - | chr7.3:41789316-41789335 | None:intergenic | 25.0% |
| !! | TTACGAAAACTAAAGTGTTT+CGG | + | chr7.3:41790451-41790470 | MS.gene89801:intron | 25.0% |
| !!! | ACTCAACATTTTTTTACAGA+TGG | + | chr7.3:41791290-41791309 | MS.gene89801:intron | 25.0% |
| !!! | CATTGCAGATCTTTTAAAAA+GGG | + | chr7.3:41787541-41787560 | MS.gene89801:intron | 25.0% |
| !!! | TCATTGCAGATCTTTTAAAA+AGG | + | chr7.3:41787540-41787559 | MS.gene89801:intron | 25.0% |
| !!! | TCGGAACATCATTAATTTTT+TGG | - | chr7.3:41787470-41787489 | None:intergenic | 25.0% |
| AAAGAACTTACATTGGAGAA+AGG | - | chr7.3:41787233-41787252 | None:intergenic | 30.0% | |
| AAATTCACATCTAGACTATG+TGG | - | chr7.3:41788319-41788338 | None:intergenic | 30.0% | |
| AACTCATATATATACCGTCA+GGG | - | chr7.3:41788630-41788649 | None:intergenic | 30.0% | |
| AACTCTATCGCATTATTTGA+TGG | + | chr7.3:41789421-41789440 | MS.gene89801:CDS | 30.0% | |
| AAGAGATAGACAATTGATCA+TGG | + | chr7.3:41790366-41790385 | MS.gene89801:CDS | 30.0% | |
| AAGAGCAAATGAAAATGAGA+TGG | + | chr7.3:41789556-41789575 | MS.gene89801:CDS | 30.0% | |
| AATGGACAAAGAACTTACAT+TGG | - | chr7.3:41787240-41787259 | None:intergenic | 30.0% | |
| AATTCATCCAGAATATCTCT+TGG | + | chr7.3:41789976-41789995 | MS.gene89801:CDS | 30.0% | |
| AATTGTCAACCATTGAACTT+GGG | + | chr7.3:41789371-41789390 | MS.gene89801:CDS | 30.0% | |
| ATAGACAATTGATCATGGAT+AGG | + | chr7.3:41790371-41790390 | MS.gene89801:CDS | 30.0% | |
| ATGATCAATTGTCTATCTCT+TGG | - | chr7.3:41790367-41790386 | None:intergenic | 30.0% | |
| ATGCTACACTGTATATCAAT+AGG | - | chr7.3:41790513-41790532 | None:intergenic | 30.0% | |
| ATGTTTGAACTTGGATTTAC+AGG | + | chr7.3:41790818-41790837 | MS.gene89801:intron | 30.0% | |
| CAGTTTCTATCATCTTTCAA+TGG | + | chr7.3:41790211-41790230 | MS.gene89801:CDS | 30.0% | |
| CATTGAAAGATGATAGAAAC+TGG | - | chr7.3:41790213-41790232 | None:intergenic | 30.0% | |
| GAAGAAATCAACCAAATTGA+AGG | - | chr7.3:41788984-41789003 | None:intergenic | 30.0% | |
| GTTACGTTTATGTTTGAACT+TGG | + | chr7.3:41790809-41790828 | MS.gene89801:intron | 30.0% | |
| TAACTCATATATATACCGTC+AGG | - | chr7.3:41788631-41788650 | None:intergenic | 30.0% | |
| TAAGTACATCATGTGCTTTA+CGG | - | chr7.3:41790556-41790575 | None:intergenic | 30.0% | |
| TAATCAAATTACATGCATCG+GGG | - | chr7.3:41787745-41787764 | None:intergenic | 30.0% | |
| TAATTGTCAACCATTGAACT+TGG | + | chr7.3:41789370-41789389 | MS.gene89801:CDS | 30.0% | |
| TACACAAGCCATAGTTAAAA+TGG | - | chr7.3:41787503-41787522 | None:intergenic | 30.0% | |
| TAGAAACAGAAGCAAATCAA+TGG | - | chr7.3:41787258-41787277 | None:intergenic | 30.0% | |
| TAGTTACGTTAAAAGTCACA+CGG | + | chr7.3:41788556-41788575 | MS.gene89801:intron | 30.0% | |
| TATAATCTAAAGACACGAGA+AGG | + | chr7.3:41790750-41790769 | MS.gene89801:intron | 30.0% | |
| TCGAAGAATATACATCATCT+GGG | - | chr7.3:41787929-41787948 | None:intergenic | 30.0% | |
| TCTTTGTTACCATTCTTTCA+GGG | + | chr7.3:41788178-41788197 | MS.gene89801:intron | 30.0% | |
| TGTAGTAAAAGAGAAAAGCT+AGG | - | chr7.3:41791215-41791234 | None:intergenic | 30.0% | |
| TTTCAGTCAGAATTCAAACT+CGG | - | chr7.3:41787364-41787383 | None:intergenic | 30.0% | |
| ! | AGCTTTTCTCTTTTACTACA+TGG | + | chr7.3:41791215-41791234 | MS.gene89801:intron | 30.0% |
| ! | ATGTTTTGTCTCAAATGATG+AGG | - | chr7.3:41789585-41789604 | None:intergenic | 30.0% |
| ! | CATTTTCATTTGCTCTTTTG+AGG | - | chr7.3:41789553-41789572 | None:intergenic | 30.0% |
| ! | GACAAAACATATTGGTTATG+TGG | + | chr7.3:41789595-41789614 | MS.gene89801:CDS | 30.0% |
| ! | GCAATTTGCTTCATTTAACT+CGG | + | chr7.3:41788833-41788852 | MS.gene89801:CDS | 30.0% |
| !! | AACACATGTCTGTTTGTTTT+AGG | + | chr7.3:41787826-41787845 | MS.gene89801:intron | 30.0% |
| !! | AATTTTTCAGACTATTCTGC+TGG | + | chr7.3:41788785-41788804 | MS.gene89801:intron | 30.0% |
| !! | AGATCTTTACTTGTTGTAGA+AGG | - | chr7.3:41788445-41788464 | None:intergenic | 30.0% |
| !! | CTTTCTTCAGAATTGATTTG+TGG | - | chr7.3:41790109-41790128 | None:intergenic | 30.0% |
| !! | GGCTCTTTGAAATACAAAAA+AGG | - | chr7.3:41789103-41789122 | None:intergenic | 30.0% |
| !!! | ATTTTTTCTTTGACATGCAC+AGG | + | chr7.3:41791504-41791523 | MS.gene89801:intron | 30.0% |
| !!! | CTTTTAAAGTCACACATGAT+CGG | - | chr7.3:41788536-41788555 | None:intergenic | 30.0% |
| !!! | TTTTTTTTGTGTTAACCCTC+CGG | - | chr7.3:41791104-41791123 | None:intergenic | 30.0% |
| AAAAGTTTCGAGATTCCTGA+AGG | + | chr7.3:41789953-41789972 | MS.gene89801:CDS | 35.0% | |
| AAGTCTTTCTTTCTGTGGAA+TGG | - | chr7.3:41791019-41791038 | None:intergenic | 35.0% | |
| AATCAAATTACATGCATCGG+GGG | - | chr7.3:41787744-41787763 | None:intergenic | 35.0% | |
| AATCCTATGAAGCCTATTAG+TGG | + | chr7.3:41790280-41790299 | MS.gene89801:CDS | 35.0% | |
| AATGTATAGAATCTCACCTC+AGG | - | chr7.3:41788290-41788309 | None:intergenic | 35.0% | |
| ACTTGGAAAGTGAACTATCA+TGG | + | chr7.3:41790901-41790920 | MS.gene89801:CDS | 35.0% | |
| AGAAAAGTAATCAGCCTTTG+GGG | + | chr7.3:41787874-41787893 | MS.gene89801:CDS | 35.0% | |
| AGGAAAAGGCAGAAAATAGA+TGG | + | chr7.3:41790849-41790868 | MS.gene89801:CDS | 35.0% | |
| ATCACTTGGTAGAAGAGATA+TGG | + | chr7.3:41789630-41789649 | MS.gene89801:CDS | 35.0% | |
| ATGTCCAATAAAAAGCAGCA+TGG | + | chr7.3:41789923-41789942 | MS.gene89801:CDS | 35.0% | |
| ATTCTGACTGAAACAATCCT+TGG | + | chr7.3:41787371-41787390 | MS.gene89801:intron | 35.0% | |
| ATTGATCATGGATAGGATGA+AGG | + | chr7.3:41790378-41790397 | MS.gene89801:CDS | 35.0% | |
| CACTTGGTAAACATGGAAAT+TGG | - | chr7.3:41788669-41788688 | None:intergenic | 35.0% | |
| CAGAAAAGTAATCAGCCTTT+GGG | + | chr7.3:41787873-41787892 | MS.gene89801:CDS | 35.0% | |
| CGAAGAATATACATCATCTG+GGG | - | chr7.3:41787928-41787947 | None:intergenic | 35.0% | |
| CTCGAAGAATATACATCATC+TGG | - | chr7.3:41787930-41787949 | None:intergenic | 35.0% | |
| CTCTTTGTTACCATTCTTTC+AGG | + | chr7.3:41788177-41788196 | MS.gene89801:intron | 35.0% | |
| CTTAAGAATGGTAACAAGTC+AGG | + | chr7.3:41790572-41790591 | MS.gene89801:CDS | 35.0% | |
| GAAAACTTTGGTCCACTAAT+AGG | - | chr7.3:41790295-41790314 | None:intergenic | 35.0% | |
| GATGTATATTCTTCGAGAGA+AGG | + | chr7.3:41787933-41787952 | MS.gene89801:CDS | 35.0% | |
| GCACATGATGTACTTAAGAA+TGG | + | chr7.3:41790560-41790579 | MS.gene89801:CDS | 35.0% | |
| GGAGACAAAATCAAATCACT+TGG | + | chr7.3:41789616-41789635 | MS.gene89801:CDS | 35.0% | |
| GGTCGGATAATAAAAGATTG+CGG | - | chr7.3:41789203-41789222 | None:intergenic | 35.0% | |
| GTAAACAATCTTTACCCTGA+CGG | + | chr7.3:41788613-41788632 | MS.gene89801:intron | 35.0% | |
| GTCGGATAATAAAAGATTGC+GGG | - | chr7.3:41789202-41789221 | None:intergenic | 35.0% | |
| GTGACATCATTAAGATCGAA+TGG | + | chr7.3:41787327-41787346 | MS.gene89801:intron | 35.0% | |
| TACATCAACGAGATTTCCTA+AGG | + | chr7.3:41789490-41789509 | MS.gene89801:CDS | 35.0% | |
| TAGTATATTTCAAAGCAGGG+TGG | - | chr7.3:41788348-41788367 | None:intergenic | 35.0% | |
| TATATGAGACCTAACACTGT+TGG | - | chr7.3:41790053-41790072 | None:intergenic | 35.0% | |
| TATTCTGGATGAATTCCTTC+AGG | - | chr7.3:41789971-41789990 | None:intergenic | 35.0% | |
| TCATCTTTCAATGGCAATTC+AGG | + | chr7.3:41790220-41790239 | MS.gene89801:CDS | 35.0% | |
| TCCAGATCTTCTATGACTAT+AGG | - | chr7.3:41790927-41790946 | None:intergenic | 35.0% | |
| TCGGATAATAAAAGATTGCG+GGG | - | chr7.3:41789201-41789220 | None:intergenic | 35.0% | |
| TGGACATTACCATCTTGAAA+GGG | + | chr7.3:41791364-41791383 | MS.gene89801:CDS | 35.0% | |
| TTCACAAGTCTTTCTTTCTG+TGG | - | chr7.3:41791024-41791043 | None:intergenic | 35.0% | |
| TTCCAAAATCCCTTTCAAGA+TGG | - | chr7.3:41791376-41791395 | None:intergenic | 35.0% | |
| TTGTAAGCTCAACTGAGATT+AGG | + | chr7.3:41788695-41788714 | MS.gene89801:intron | 35.0% | |
| TTGTATTTCAAAGAGCCTTG+CGG | + | chr7.3:41789106-41789125 | MS.gene89801:intron | 35.0% | |
| ! | ATTTTCTGCCTTTTCCTTTC+AGG | - | chr7.3:41790846-41790865 | None:intergenic | 35.0% |
| ! | GCTTTTGTGATACTATGCAA+TGG | + | chr7.3:41787178-41787197 | MS.gene89801:CDS | 35.0% |
| ! | GGATTATTAACCTTTTCCTG+TGG | - | chr7.3:41790265-41790284 | None:intergenic | 35.0% |
| ! | GGTATTGAAGAGGTCTATTA+TGG | - | chr7.3:41791176-41791195 | None:intergenic | 35.0% |
| ! | TACCATCTTGAAAGGGATTT+TGG | + | chr7.3:41791371-41791390 | MS.gene89801:CDS | 35.0% |
| ! | TCTTGCCAAGGAACATTTTT+GGG | + | chr7.3:41788217-41788236 | MS.gene89801:CDS | 35.0% |
| ! | TGACACTAGTTTAATTCCTG+AGG | + | chr7.3:41788271-41788290 | MS.gene89801:CDS | 35.0% |
| ! | TTTTCGCACCGAAAACTATA+AGG | - | chr7.3:41789006-41789025 | None:intergenic | 35.0% |
| !! | AGAATTGATTTGTGGCTGAA+CGG | - | chr7.3:41790101-41790120 | None:intergenic | 35.0% |
| !! | ATAGTTTTCGGTGCGAAAAT+TGG | + | chr7.3:41789007-41789026 | MS.gene89801:intron | 35.0% |
| !!! | ATGACCATGCTGCTTTTTAT+TGG | - | chr7.3:41789930-41789949 | None:intergenic | 35.0% |
| !!! | CTTAACCCTCTAGTTTTCAT+GGG | - | chr7.3:41787446-41787465 | None:intergenic | 35.0% |
| !!! | TCTTAACCCTCTAGTTTTCA+TGG | - | chr7.3:41787447-41787466 | None:intergenic | 35.0% |
| !!! | TTGTTTTAGGACTTTGACCT+GGG | + | chr7.3:41787839-41787858 | MS.gene89801:intron | 35.0% |
| !!! | TTTGTTTTAGGACTTTGACC+TGG | + | chr7.3:41787838-41787857 | MS.gene89801:intron | 35.0% |
| AAAACTCCTTGTGGAAGAAC+AGG | - | chr7.3:41788813-41788832 | None:intergenic | 40.0% | |
| AAGACTTGTGAAATGCCAGA+TGG | + | chr7.3:41791032-41791051 | MS.gene89801:intron | 40.0% | |
| AATACTTACCCTTCCACCAT+CGG | - | chr7.3:41790422-41790441 | None:intergenic | 40.0% | |
| AATTGAAGAAGCCACTCATC+CGG | - | chr7.3:41788397-41788416 | None:intergenic | 40.0% | |
| ACAATGCCATCAGAGTTTAC+CGG | + | chr7.3:41790073-41790092 | MS.gene89801:CDS | 40.0% | |
| ACAGCATCCAAGAGATATTC+TGG | - | chr7.3:41789986-41790005 | None:intergenic | 40.0% | |
| ACCAGTGAAAATATCCTCAC+AGG | - | chr7.3:41788246-41788265 | None:intergenic | 40.0% | |
| AGAGAAGGAACTGATGATTC+AGG | + | chr7.3:41787948-41787967 | MS.gene89801:CDS | 40.0% | |
| AGCTGCAAAAGATGCAGTAA+AGG | - | chr7.3:41791565-41791584 | None:intergenic | 40.0% | |
| AGGTAAGTAAAGTCAGACCA+AGG | - | chr7.3:41787391-41787410 | None:intergenic | 40.0% | |
| ATAATAGGTTGCTGAAGACC+TGG | + | chr7.3:41789295-41789314 | MS.gene89801:intron | 40.0% | |
| ATCTCAGTTGAGCTTACAAC+TGG | - | chr7.3:41788694-41788713 | None:intergenic | 40.0% | |
| ATTATGACCGAGCAACTACT+TGG | + | chr7.3:41789728-41789747 | MS.gene89801:CDS | 40.0% | |
| CATGTAGATCCAACAGTGTT+AGG | + | chr7.3:41790041-41790060 | MS.gene89801:CDS | 40.0% | |
| CCAGAAAAGTAATCAGCCTT+TGG | + | chr7.3:41787872-41787891 | MS.gene89801:CDS | 40.0% | |
| CCTTTCCCATGAAAACTAGA+GGG | + | chr7.3:41787438-41787457 | MS.gene89801:intron | 40.0% | |
| CTGGACATTACCATCTTGAA+AGG | + | chr7.3:41791363-41791382 | MS.gene89801:CDS | 40.0% | |
| GAATCAGTTCCCAAGTTCAA+TGG | - | chr7.3:41789383-41789402 | None:intergenic | 40.0% | |
| GACAACTCATAGTCATCCTT+AGG | - | chr7.3:41789509-41789528 | None:intergenic | 40.0% | |
| GCAAATACAGTTTGGGAGAA+GGG | + | chr7.3:41788012-41788031 | MS.gene89801:CDS | 40.0% | |
| GCAAATTGCAAAACTCCTTG+TGG | - | chr7.3:41788822-41788841 | None:intergenic | 40.0% | |
| GCCTATAGTCATAGAAGATC+TGG | + | chr7.3:41790923-41790942 | MS.gene89801:CDS | 40.0% | |
| GGAAACCCAAAAATGTTCCT+TGG | - | chr7.3:41788225-41788244 | None:intergenic | 40.0% | |
| TACAGGTACCTGAAAGGAAA+AGG | + | chr7.3:41790835-41790854 | MS.gene89801:intron | 40.0% | |
| TATCTCTTGGATGCTGTTGT+CGG | + | chr7.3:41789989-41790008 | MS.gene89801:CDS | 40.0% | |
| TATTATCCGACCTGCAGTTA+CGG | + | chr7.3:41789211-41789230 | MS.gene89801:intron | 40.0% | |
| TCAATTTGCATCTGGCATCA+AGG | + | chr7.3:41788411-41788430 | MS.gene89801:CDS | 40.0% | |
| TCCTTTCCCATGAAAACTAG+AGG | + | chr7.3:41787437-41787456 | MS.gene89801:intron | 40.0% | |
| TCTACATGAAGTTTCGTCAG+AGG | - | chr7.3:41790029-41790048 | None:intergenic | 40.0% | |
| TCTCACTTTGTCGACAATGA+TGG | + | chr7.3:41789659-41789678 | MS.gene89801:CDS | 40.0% | |
| TCTCGTCGCAAATACAGTTT+GGG | + | chr7.3:41788005-41788024 | MS.gene89801:CDS | 40.0% | |
| TGAAAATTCATCGTTCCCCA+TGG | - | chr7.3:41790188-41790207 | None:intergenic | 40.0% | |
| TGATCTTATGCCTGAGCTTA+CGG | + | chr7.3:41790162-41790181 | MS.gene89801:CDS | 40.0% | |
| TGGATTTACAGGTACCTGAA+AGG | + | chr7.3:41790829-41790848 | MS.gene89801:intron | 40.0% | |
| TGGCTTCTTCAATTTGCATC+TGG | + | chr7.3:41788403-41788422 | MS.gene89801:CDS | 40.0% | |
| TTGTCCAATTCAGCCATTGA+GGG | - | chr7.3:41789815-41789834 | None:intergenic | 40.0% | |
| TTGTTATAACCCGTAACTGC+AGG | - | chr7.3:41789224-41789243 | None:intergenic | 40.0% | |
| TTGTTCGCGCTAGAAAACTT+TGG | - | chr7.3:41790307-41790326 | None:intergenic | 40.0% | |
| TTTGTCCAATTCAGCCATTG+AGG | - | chr7.3:41789816-41789835 | None:intergenic | 40.0% | |
| ! | AATGCTCTCTGGTATTGAAG+AGG | - | chr7.3:41791186-41791205 | None:intergenic | 40.0% |
| ! | AATGGCACTATGCTGTCTTT+TGG | + | chr7.3:41787196-41787215 | MS.gene89801:CDS | 40.0% |
| ! | ATAGAAGATCTGGAATCCTC+AGG | + | chr7.3:41790933-41790952 | MS.gene89801:CDS | 40.0% |
| ! | CAATGAGCATGGACTTTTCT+TGG | + | chr7.3:41791317-41791336 | MS.gene89801:CDS | 40.0% |
| ! | CTCTTGCCAAGGAACATTTT+TGG | + | chr7.3:41788216-41788235 | MS.gene89801:CDS | 40.0% |
| ! | CTTTGTCGATGCAAAAGTGT+TGG | + | chr7.3:41789045-41789064 | MS.gene89801:intron | 40.0% |
| ! | TAGAAGATCTGGAATCCTCA+GGG | + | chr7.3:41790934-41790953 | MS.gene89801:CDS | 40.0% |
| ! | TCCTGTGAGGATATTTTCAC+TGG | + | chr7.3:41788242-41788261 | MS.gene89801:CDS | 40.0% |
| ! | TGGGAACTGATTCTCAAGAT+TGG | + | chr7.3:41789390-41789409 | MS.gene89801:CDS | 40.0% |
| !! | CCAAAGGCTGATTACTTTTC+TGG | - | chr7.3:41787875-41787894 | None:intergenic | 40.0% |
| !! | CTAAATGCAGAGGAGTATTG+CGG | + | chr7.3:41789144-41789163 | MS.gene89801:intron | 40.0% |
| !! | GTGTAGCATTGATAACCTCT+TGG | + | chr7.3:41790524-41790543 | MS.gene89801:intron | 40.0% |
| !! | TAAATGCAGAGGAGTATTGC+GGG | + | chr7.3:41789145-41789164 | MS.gene89801:intron | 40.0% |
| !! | TTCAGGCTTGTTGATTGATG+AGG | + | chr7.3:41790237-41790256 | MS.gene89801:CDS | 40.0% |
| !! | TTTCTGGTAAGCATTTTCCC+AGG | - | chr7.3:41787859-41787878 | None:intergenic | 40.0% |
| !!! | ACATTTTTGGGTTTCCTGTG+AGG | + | chr7.3:41788229-41788248 | MS.gene89801:CDS | 40.0% |
| AAAACCGTTCGAGTACCAGT+TGG | + | chr7.3:41791394-41791413 | MS.gene89801:CDS | 45.0% | |
| AAAATAGATGGCAGCCATCC+AGG | + | chr7.3:41790861-41790880 | MS.gene89801:CDS | 45.0% | |
| AAACCGTTCGAGTACCAGTT+GGG | + | chr7.3:41791395-41791414 | MS.gene89801:CDS | 45.0% | |
| AACGATGAAACAAGCCCAAC+TGG | - | chr7.3:41791412-41791431 | None:intergenic | 45.0% | |
| AAGAAGCTGCGCATTTGACT+TGG | + | chr7.3:41790884-41790903 | MS.gene89801:CDS | 45.0% | |
| ACTGGCACACTTGGTAAACA+TGG | - | chr7.3:41788676-41788695 | None:intergenic | 45.0% | |
| AGATTGCTCAAGTGATCCGA+AGG | + | chr7.3:41791340-41791359 | MS.gene89801:CDS | 45.0% | |
| ATACTTACCCTTCCACCATC+GGG | - | chr7.3:41790421-41790440 | None:intergenic | 45.0% | |
| ATTATCCGACCTGCAGTTAC+GGG | + | chr7.3:41789212-41789231 | MS.gene89801:intron | 45.0% | |
| CAGATGGTATGCAATGAGCA+TGG | + | chr7.3:41791306-41791325 | MS.gene89801:intron | 45.0% | |
| CGCAAATACAGTTTGGGAGA+AGG | + | chr7.3:41788011-41788030 | MS.gene89801:CDS | 45.0% | |
| CTAGGAGTTAGAATGCTCTC+TGG | - | chr7.3:41791197-41791216 | None:intergenic | 45.0% | |
| CTCACACACACTAAATGCAG+AGG | + | chr7.3:41789134-41789153 | MS.gene89801:intron | 45.0% | |
| CTTCATATGCTGCGTTTCGT+AGG | + | chr7.3:41787279-41787298 | MS.gene89801:intron | 45.0% | |
| CTTCTCCATTGTTCCCTCAA+TGG | + | chr7.3:41789799-41789818 | MS.gene89801:CDS | 45.0% | |
| GAAATGCCAGATGGCATTCA+TGG | + | chr7.3:41791041-41791060 | MS.gene89801:intron | 45.0% | |
| GCCTGTCTGTCTATATGCAA+CGG | - | chr7.3:41789849-41789868 | None:intergenic | 45.0% | |
| GCTGAATTGGACAAAGCGAT+TGG | + | chr7.3:41789821-41789840 | MS.gene89801:CDS | 45.0% | |
| GGATAGGATGAAGGAGTTGA+GGG | + | chr7.3:41790387-41790406 | MS.gene89801:CDS | 45.0% | |
| GGTCCACTAATAGGCTTCAT+AGG | - | chr7.3:41790286-41790305 | None:intergenic | 45.0% | |
| GTCTCGTCGCAAATACAGTT+TGG | + | chr7.3:41788004-41788023 | MS.gene89801:CDS | 45.0% | |
| TACCATTCTTTCAGGGCTGT+TGG | + | chr7.3:41788185-41788204 | MS.gene89801:intron | 45.0% | |
| TATAACCCGTAACTGCAGGT+CGG | - | chr7.3:41789220-41789239 | None:intergenic | 45.0% | |
| TCCATCCTGTGAAAACCTCT+AGG | - | chr7.3:41791532-41791551 | None:intergenic | 45.0% | |
| TCCGTTGCATATAGACAGAC+AGG | + | chr7.3:41789845-41789864 | MS.gene89801:CDS | 45.0% | |
| TGACCGTCTTCAGTACTAGA+AGG | + | chr7.3:41790992-41791011 | MS.gene89801:intron | 45.0% | |
| TGGATAGGATGAAGGAGTTG+AGG | + | chr7.3:41790386-41790405 | MS.gene89801:CDS | 45.0% | |
| TGGTAGAAGAGATATGGCCA+TGG | + | chr7.3:41789636-41789655 | MS.gene89801:CDS | 45.0% | |
| TGTTCCCTCAATGGCTGAAT+TGG | + | chr7.3:41789808-41789827 | MS.gene89801:CDS | 45.0% | |
| TTCAGCCATTGAGGGAACAA+TGG | - | chr7.3:41789807-41789826 | None:intergenic | 45.0% | |
| TTGTCGACAAAGTGAGACCA+TGG | - | chr7.3:41789656-41789675 | None:intergenic | 45.0% | |
| ! | AGATGGTAATGTCCAGCCTT+CGG | - | chr7.3:41791359-41791378 | None:intergenic | 45.0% |
| ! | AGGTTCCTAGAGGTTTTCAC+AGG | + | chr7.3:41791524-41791543 | MS.gene89801:intron | 45.0% |
| ! | GGACCTTCTAGTACTGAAGA+CGG | - | chr7.3:41790998-41791017 | None:intergenic | 45.0% |
| ! | GGCTCTGATAATTCGGAGTT+CGG | - | chr7.3:41791067-41791086 | None:intergenic | 45.0% |
| ! | TCCTAGAGGTTTTCACAGGA+TGG | + | chr7.3:41791528-41791547 | MS.gene89801:CDS | 45.0% |
| ! | TGGCAAATTAGCTCTTGCCA+AGG | + | chr7.3:41788205-41788224 | MS.gene89801:CDS | 45.0% |
| ! | TTGGGCTTGTTTCATCGTTG+AGG | + | chr7.3:41791413-41791432 | MS.gene89801:CDS | 45.0% |
| !! | ATGATGGACAGTTTGGAGAC+AGG | + | chr7.3:41789675-41789694 | MS.gene89801:CDS | 45.0% |
| !! | GAAACGATTTGCTGATCGTG+AGG | + | chr7.3:41790605-41790624 | MS.gene89801:CDS | 45.0% |
| !! | GTCGACAATGATGGACAGTT+TGG | + | chr7.3:41789668-41789687 | MS.gene89801:CDS | 45.0% |
| !!! | CCCTCTAGTTTTCATGGGAA+AGG | - | chr7.3:41787441-41787460 | None:intergenic | 45.0% |
| AAGCCCAACTGGTACTCGAA+CGG | - | chr7.3:41791401-41791420 | None:intergenic | 50.0% | |
| ACATTTGATGTGCTGAGGCG+GGG | - | chr7.3:41789178-41789197 | None:intergenic | 50.0% | |
| ATGACCGAGCAACTACTTGG+AGG | + | chr7.3:41789731-41789750 | MS.gene89801:CDS | 50.0% | |
| CAGTTTGGAGACAGGTCGAA+TGG | + | chr7.3:41789683-41789702 | MS.gene89801:CDS | 50.0% | |
| CTCAGGGAACATGCTCATAG+AGG | + | chr7.3:41790950-41790969 | MS.gene89801:CDS | 50.0% | |
| CTCTATGAGCATGTTCCCTG+AGG | - | chr7.3:41790952-41790971 | None:intergenic | 50.0% | |
| CTGGTACCTGTTCTTCCACA+AGG | + | chr7.3:41788804-41788823 | MS.gene89801:CDS | 50.0% | |
| GACATTTGATGTGCTGAGGC+GGG | - | chr7.3:41789179-41789198 | None:intergenic | 50.0% | |
| GACCCTAGTAAGCTGCAGTT+CGG | - | chr7.3:41787419-41787438 | None:intergenic | 50.0% | |
| GAGCTTACAACTGGCACACT+TGG | - | chr7.3:41788685-41788704 | None:intergenic | 50.0% | |
| GCTTTACGGTTCGTTCCAAG+AGG | - | chr7.3:41790542-41790561 | None:intergenic | 50.0% | |
| GGACATTTGATGTGCTGAGG+CGG | - | chr7.3:41789180-41789199 | None:intergenic | 50.0% | |
| GTCCGAACTGCAGCTTACTA+GGG | + | chr7.3:41787414-41787433 | MS.gene89801:intron | 50.0% | |
| TACTTACCCTTCCACCATCG+GGG | - | chr7.3:41790420-41790439 | None:intergenic | 50.0% | |
| TCAAATGCGCAGCTTCTTCC+TGG | - | chr7.3:41790882-41790901 | None:intergenic | 50.0% | |
| TGACATGCACAGGTTCCTAG+AGG | + | chr7.3:41791514-41791533 | MS.gene89801:intron | 50.0% | |
| TGCCAACAGCCCTGAAAGAA+TGG | - | chr7.3:41788190-41788209 | None:intergenic | 50.0% | |
| TTGAGGGAACTTATCCCCGA+TGG | + | chr7.3:41790403-41790422 | MS.gene89801:CDS | 50.0% | |
| ! | ATCAGCCTTTGGGGAGTATG+TGG | + | chr7.3:41787883-41787902 | MS.gene89801:CDS | 50.0% |
| ! | GGAAGGGGGCTCTGATAATT+CGG | - | chr7.3:41791074-41791093 | None:intergenic | 50.0% |
| ! | TCAGCCTTTGGGGAGTATGT+GGG | + | chr7.3:41787884-41787903 | MS.gene89801:CDS | 50.0% |
| !! | AACTTATCCCCGATGGTGGA+AGG | + | chr7.3:41790410-41790429 | MS.gene89801:CDS | 50.0% |
| !! | ACTTATCCCCGATGGTGGAA+GGG | + | chr7.3:41790411-41790430 | MS.gene89801:CDS | 50.0% |
| ACCGAGCAACTACTTGGAGG+CGG | + | chr7.3:41789734-41789753 | MS.gene89801:CDS | 55.0% | |
| ACCGCCTCCAAGTAGTTGCT+CGG | - | chr7.3:41789738-41789757 | None:intergenic | 55.0% | |
| ACGGAGCCGGTAAACTCTGA+TGG | - | chr7.3:41790082-41790101 | None:intergenic | 55.0% | |
| AGGGAACTTATCCCCGATGG+TGG | + | chr7.3:41790406-41790425 | MS.gene89801:CDS | 55.0% | |
| ATGCCTGAGCTTACGGCCAT+GGG | + | chr7.3:41790169-41790188 | MS.gene89801:CDS | 55.0% | |
| ATGCGCAGCTTCTTCCTGGA+TGG | - | chr7.3:41790878-41790897 | None:intergenic | 55.0% | |
| CATTTGATGTGCTGAGGCGG+GGG | - | chr7.3:41789177-41789196 | None:intergenic | 55.0% | |
| CGGGGACATTTGATGTGCTG+AGG | - | chr7.3:41789183-41789202 | None:intergenic | 55.0% | |
| CGTCCGAACTGCAGCTTACT+AGG | + | chr7.3:41787413-41787432 | MS.gene89801:intron | 55.0% | |
| GATTTGTGGCTGAACGGAGC+CGG | - | chr7.3:41790095-41790114 | None:intergenic | 55.0% | |
| GCATCTCTTCCTCCAGTGTC+CGG | + | chr7.3:41788375-41788394 | MS.gene89801:intron | 55.0% | |
| GTGTTAACCCTCCGGTTCCA+GGG | - | chr7.3:41791096-41791115 | None:intergenic | 55.0% | |
| GTTCGGCCATGAATGCCATC+TGG | - | chr7.3:41791050-41791069 | None:intergenic | 55.0% | |
| TAAGCTGCAGTTCGGACGAG+AGG | - | chr7.3:41787411-41787430 | None:intergenic | 55.0% | |
| TATGCCTGAGCTTACGGCCA+TGG | + | chr7.3:41790168-41790187 | MS.gene89801:CDS | 55.0% | |
| TGCTCAAGTGATCCGAAGGC+TGG | + | chr7.3:41791344-41791363 | MS.gene89801:CDS | 55.0% | |
| TGTGTGTGAGTTTCGCCGCA+AGG | - | chr7.3:41789124-41789143 | None:intergenic | 55.0% | |
| TGTGTTAACCCTCCGGTTCC+AGG | - | chr7.3:41791097-41791116 | None:intergenic | 55.0% | |
| TGTTAACCCTCCGGTTCCAG+GGG | - | chr7.3:41791095-41791114 | None:intergenic | 55.0% | |
| ! | AGCCTTTGGGGAGTATGTGG+GGG | + | chr7.3:41787886-41787905 | MS.gene89801:CDS | 55.0% |
| ! | CAGCCTTTGGGGAGTATGTG+GGG | + | chr7.3:41787885-41787904 | MS.gene89801:CDS | 55.0% |
| ! | GTTGATTGATGAGGCGCCAC+AGG | + | chr7.3:41790246-41790265 | MS.gene89801:CDS | 55.0% |
| ! | TGATGAGGCGCCACAGGAAA+AGG | + | chr7.3:41790252-41790271 | MS.gene89801:CDS | 55.0% |
| GAAGCCACTCATCCGGACAC+TGG | - | chr7.3:41788390-41788409 | None:intergenic | 60.0% | |
| TCCCCCCACATACTCCCCAA+AGG | - | chr7.3:41787891-41787910 | None:intergenic | 60.0% | |
| TCCTCCAGTGTCCGGATGAG+TGG | + | chr7.3:41788383-41788402 | MS.gene89801:intron | 60.0% | |
| TGCCTGAGCTTACGGCCATG+GGG | + | chr7.3:41790170-41790189 | MS.gene89801:CDS | 60.0% | |
| TTATCAGAGCCCCCTTCCCC+TGG | + | chr7.3:41791076-41791095 | MS.gene89801:intron | 60.0% | |
| TTCCCCATGGCCGTAAGCTC+AGG | - | chr7.3:41790175-41790194 | None:intergenic | 60.0% | |
| ! | GCCTTTGGGGAGTATGTGGG+GGG | + | chr7.3:41787887-41787906 | MS.gene89801:CDS | 60.0% |
| AACCCTCCGGTTCCAGGGGA+AGG | - | chr7.3:41791091-41791110 | None:intergenic | 65.0% | |
| ACCCTCCGGTTCCAGGGGAA+GGG | - | chr7.3:41791090-41791109 | None:intergenic | 65.0% | |
| GCCACTCATCCGGACACTGG+AGG | - | chr7.3:41788387-41788406 | None:intergenic | 65.0% | |
| CCCCTTCCCCTGGAACCGGA+GGG | + | chr7.3:41791086-41791105 | MS.gene89801:intron | 70.0% | |
| CCCTCCGGTTCCAGGGGAAG+GGG | - | chr7.3:41791089-41791108 | None:intergenic | 70.0% | |
| CCTCCGGTTCCAGGGGAAGG+GGG | - | chr7.3:41791088-41791107 | None:intergenic | 70.0% | |
| GAGCCCCCTTCCCCTGGAAC+CGG | + | chr7.3:41791082-41791101 | MS.gene89801:intron | 70.0% | |
| CCCCCTTCCCCTGGAACCGG+AGG | + | chr7.3:41791085-41791104 | MS.gene89801:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 41787144 | 41791606 | 41787144 | ID=MS.gene89801 |
| chr7.3 | mRNA | 41787144 | 41791606 | 41787144 | ID=MS.gene89801.t1;Parent=MS.gene89801 |
| chr7.3 | exon | 41787144 | 41787241 | 41787144 | ID=MS.gene89801.t1.exon1;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41787144 | 41787241 | 41787144 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41787848 | 41788033 | 41787848 | ID=MS.gene89801.t1.exon2;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41787848 | 41788033 | 41787848 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41788199 | 41788292 | 41788199 | ID=MS.gene89801.t1.exon3;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41788199 | 41788292 | 41788199 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41788391 | 41788432 | 41788391 | ID=MS.gene89801.t1.exon4;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41788391 | 41788432 | 41788391 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41788795 | 41788854 | 41788795 | ID=MS.gene89801.t1.exon5;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41788795 | 41788854 | 41788795 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41789302 | 41790432 | 41789302 | ID=MS.gene89801.t1.exon6;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41789302 | 41790432 | 41789302 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41790525 | 41790626 | 41790525 | ID=MS.gene89801.t1.exon7;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41790525 | 41790626 | 41790525 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41790840 | 41790971 | 41790840 | ID=MS.gene89801.t1.exon8;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41790840 | 41790971 | 41790840 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41791309 | 41791434 | 41791309 | ID=MS.gene89801.t1.exon9;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41791309 | 41791434 | 41791309 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| chr7.3 | exon | 41791526 | 41791606 | 41791526 | ID=MS.gene89801.t1.exon10;Parent=MS.gene89801.t1 |
| chr7.3 | CDS | 41791526 | 41791606 | 41791526 | ID=cds.MS.gene89801.t1;Parent=MS.gene89801.t1 |
| Gene Sequence |
| Protein sequence |
