Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90054.t1 | KEH33538.1 | 98 | 409 | 8 | 0 | 1 | 409 | 22 | 430 | 1.20E-226 | 795.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90054.t1 | O81027 | 72.6 | 409 | 111 | 1 | 1 | 409 | 36 | 443 | 1.2e-166 | 587.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90054.t1 | G7IZR1 | 98.0 | 409 | 8 | 0 | 1 | 409 | 1 | 409 | 8.8e-227 | 795.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061218 | MS.gene90054 | 0.803637 | 3.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90054.t1 | MTR_3g041700 | 98.044 | 409 | 8 | 0 | 1 | 409 | 1 | 409 | 0.0 | 832 |
| MS.gene90054.t1 | MTR_3g041700 | 98.044 | 409 | 8 | 0 | 1 | 409 | 22 | 430 | 0.0 | 831 |
| MS.gene90054.t1 | MTR_3g041700 | 97.605 | 334 | 8 | 0 | 76 | 409 | 1 | 334 | 0.0 | 669 |
| MS.gene90054.t1 | MTR_7g089330 | 72.937 | 303 | 82 | 0 | 107 | 409 | 75 | 377 | 8.55e-162 | 461 |
| MS.gene90054.t1 | MTR_7g089330 | 76.842 | 285 | 66 | 0 | 125 | 409 | 3 | 287 | 1.10e-160 | 454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90054.t1 | AT2G26800 | 72.616 | 409 | 111 | 1 | 1 | 409 | 1 | 408 | 0.0 | 617 |
| MS.gene90054.t1 | AT2G26800 | 72.616 | 409 | 111 | 1 | 1 | 409 | 36 | 443 | 0.0 | 616 |
| MS.gene90054.t1 | AT2G26800 | 72.616 | 409 | 111 | 1 | 1 | 409 | 36 | 443 | 0.0 | 616 |
| MS.gene90054.t1 | AT2G26800 | 72.034 | 354 | 99 | 0 | 56 | 409 | 10 | 363 | 0.0 | 531 |
| MS.gene90054.t1 | AT2G26800 | 68.354 | 316 | 99 | 1 | 1 | 316 | 36 | 350 | 6.75e-157 | 446 |
Find 94 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAGTTGCACCTTTAAATT+AGG | 0.211209 | 3.4:+35968192 | None:intergenic |
| AGTTCTGACTCCTAATTTAA+AGG | 0.233362 | 3.4:-35968202 | MS.gene90054:intron |
| CACCGTAGTTCCAATGCTTT+TGG | 0.246522 | 3.4:-35966869 | MS.gene90054:CDS |
| TGGAGGGAGACAAGAATATT+TGG | 0.260470 | 3.4:+35966778 | None:intergenic |
| AGCTAAAGCACTATATGATA+TGG | 0.269941 | 3.4:-35967378 | MS.gene90054:CDS |
| TATACCTGTGGGACCCATTT+AGG | 0.281236 | 3.4:+35968728 | None:intergenic |
| CATGCAAGATATGGCATATA+AGG | 0.283069 | 3.4:-35969110 | MS.gene90054:intron |
| ATCAAAACCAACGTTGATAT+TGG | 0.285460 | 3.4:-35966206 | MS.gene90054:CDS |
| CCACTTCACCATGTCAAGTT+TGG | 0.300052 | 3.4:-35970539 | None:intergenic |
| TTTGAAGCTGCCGTTGCTGC+TGG | 0.311234 | 3.4:-35968104 | MS.gene90054:CDS |
| CCGTCCACAAGTAGATAATT+TGG | 0.313604 | 3.4:-35970440 | MS.gene90054:CDS |
| GGAGGAACTGGTCCTTCAAC+TGG | 0.330205 | 3.4:+35967419 | None:intergenic |
| AACTGGAATTGAGAGCTCTT+TGG | 0.334848 | 3.4:+35967971 | None:intergenic |
| CTCCCTGTGGTCATAGTCCT+TGG | 0.337045 | 3.4:+35969214 | None:intergenic |
| GATTCTTCAGTTGCTGGTCT+TGG | 0.351386 | 3.4:-35966305 | MS.gene90054:CDS |
| GCTGTGGATTCTTCAGTTGC+TGG | 0.359338 | 3.4:-35966311 | MS.gene90054:CDS |
| ATCTCACTTGGTGACACAAT+TGG | 0.361351 | 3.4:-35967344 | MS.gene90054:CDS |
| TCTCACTTGGTGACACAATT+GGG | 0.372918 | 3.4:-35967343 | MS.gene90054:CDS |
| GGGAGAAACACGATGAAATC+TGG | 0.387304 | 3.4:-35969196 | MS.gene90054:CDS |
| TAACAAAGACATGCAAGATA+TGG | 0.395825 | 3.4:-35969119 | MS.gene90054:CDS |
| CGTCCACAAGTAGATAATTT+GGG | 0.396400 | 3.4:-35970439 | MS.gene90054:CDS |
| CTGGCAATCTGATGCCTCTC+AGG | 0.410598 | 3.4:+35968223 | None:intergenic |
| ATTCATAGACTAGCATCTAC+TGG | 0.414544 | 3.4:-35968785 | MS.gene90054:CDS |
| AATTCAATCTTTACATCTGT+TGG | 0.426921 | 3.4:+35968809 | None:intergenic |
| TCTTCAGTTGCTGGTCTTGG+TGG | 0.441483 | 3.4:-35966302 | MS.gene90054:CDS |
| ACAAGTAGATAATTTGGGTA+TGG | 0.441687 | 3.4:-35970434 | MS.gene90054:CDS |
| GGTGGCTGTCCATATGCTAA+GGG | 0.446426 | 3.4:-35966284 | MS.gene90054:CDS |
| TGGTGGCTGTCCATATGCTA+AGG | 0.451026 | 3.4:-35966285 | MS.gene90054:CDS |
| ATGGGAAACTGCTTTATTGA+AGG | 0.479991 | 3.4:-35970415 | MS.gene90054:CDS |
| GCCATTACAGCCAAAAGCAT+TGG | 0.482879 | 3.4:+35966859 | None:intergenic |
| ACAATTGGGGTAGGCACGCC+AGG | 0.486021 | 3.4:-35967329 | MS.gene90054:intron |
| TTTGTTAAGATAGTTGAAGT+TGG | 0.487269 | 3.4:-35968869 | MS.gene90054:CDS |
| TTTAAATTAGGAGTCAGAAC+TGG | 0.489900 | 3.4:+35968204 | None:intergenic |
| GCTAAAGCACTATATGATAT+GGG | 0.494567 | 3.4:-35967377 | MS.gene90054:CDS |
| GAGCTCTCAATTCCAGTTCG+AGG | 0.500214 | 3.4:-35967966 | MS.gene90054:CDS |
| TCATGCTTGGCAGCTTGTCA+TGG | 0.500596 | 3.4:+35970503 | None:intergenic |
| CAAGTAGATAATTTGGGTAT+GGG | 0.504928 | 3.4:-35970433 | MS.gene90054:CDS |
| AGAGTTCAGAGGTTCTCATC+TGG | 0.505085 | 3.4:-35970469 | MS.gene90054:CDS |
| CAGAAACATACCCTTGGAAA+AGG | 0.505637 | 3.4:-35969273 | MS.gene90054:CDS |
| CTGTCCATGGTACTCATGCT+TGG | 0.511059 | 3.4:+35970490 | None:intergenic |
| ATTGGAAAGCTCATGTCAGC+TGG | 0.513314 | 3.4:-35966188 | MS.gene90054:CDS |
| CACAAGTGACAGCTCGATAG+CGG | 0.523310 | 3.4:+35967997 | None:intergenic |
| TCAACTATCTTAACAAACTC+AGG | 0.528412 | 3.4:+35968875 | None:intergenic |
| ATCTCCTAAATGGGTCCCAC+AGG | 0.529084 | 3.4:-35968732 | MS.gene90054:intron |
| TTCTCTAGCTCCAGCAGCAA+CGG | 0.529157 | 3.4:+35968094 | None:intergenic |
| CTTCACCATGTCAAGTTTGG+AGG | 0.529375 | 3.4:-35970536 | None:intergenic |
| AGCCAAAAGCATTGGAACTA+CGG | 0.530502 | 3.4:+35966867 | None:intergenic |
| GGCAGCTTGTCATGGCCAAG+TGG | 0.534171 | 3.4:+35970511 | None:intergenic |
| GTCCACTTTCATGACACATA+CGG | 0.536770 | 3.4:-35966811 | MS.gene90054:CDS |
| TCCACTTTCATGACACATAC+GGG | 0.541191 | 3.4:-35966810 | MS.gene90054:CDS |
| GATGTTGTGTACATGCTGAA+TGG | 0.548740 | 3.4:-35966236 | MS.gene90054:CDS |
| GTTGTTGGATGCCCAGTTGA+AGG | 0.549854 | 3.4:-35967431 | MS.gene90054:CDS |
| GTTGAAGTTGGACCAAGGGA+TGG | 0.550966 | 3.4:-35968857 | MS.gene90054:CDS |
| ACAAGTGACAGCTCGATAGC+GGG | 0.551127 | 3.4:+35967998 | None:intergenic |
| TATTTGTTAACTTACTTGGA+GGG | 0.551242 | 3.4:+35966762 | None:intergenic |
| ATACCCAAATTATCTACTTG+TGG | 0.551302 | 3.4:+35970436 | None:intergenic |
| GTGTACATGCTGAATGGACT+TGG | 0.556574 | 3.4:-35966230 | MS.gene90054:CDS |
| ATGTCAGCTGGCGACTTCAT+CGG | 0.556641 | 3.4:-35966176 | MS.gene90054:CDS |
| GCCCGTATGTGTCATGAAAG+TGG | 0.558059 | 3.4:+35966809 | None:intergenic |
| TTCATAGACTAGCATCTACT+GGG | 0.564553 | 3.4:-35968784 | MS.gene90054:CDS |
| TACTGGGTTATCTGTCATTG+AGG | 0.564876 | 3.4:-35968768 | MS.gene90054:CDS |
| TCAAGTTTGGAGGAGCCACT+TGG | 0.565206 | 3.4:-35970526 | MS.gene90054:CDS |
| GGAGACAAGAATATTTGGAA+GGG | 0.565627 | 3.4:+35966783 | None:intergenic |
| GGGAGACAAGAATATTTGGA+AGG | 0.577919 | 3.4:+35966782 | None:intergenic |
| GGTTGTTTCGAAATCTCACT+TGG | 0.579694 | 3.4:-35967356 | MS.gene90054:CDS |
| GATAGTTGAAGTTGGACCAA+GGG | 0.581744 | 3.4:-35968861 | MS.gene90054:CDS |
| TGGACTGAAAGAGTCACCTC+GGG | 0.587158 | 3.4:+35969234 | None:intergenic |
| GAGCTTTCCAATATCAACGT+TGG | 0.590179 | 3.4:+35966199 | None:intergenic |
| AGCTCTCAATTCCAGTTCGA+GGG | 0.594177 | 3.4:-35967965 | MS.gene90054:intron |
| TGGGCAATGCAGTTTATGAA+AGG | 0.595135 | 3.4:-35968902 | MS.gene90054:intron |
| GAGGAACTGGTCCTTCAACT+GGG | 0.597731 | 3.4:+35967420 | None:intergenic |
| GTGGCTGTCCATATGCTAAG+GGG | 0.598484 | 3.4:-35966283 | MS.gene90054:CDS |
| ACACAGCAGAAACATACCCT+TGG | 0.600138 | 3.4:-35969279 | MS.gene90054:CDS |
| CCAAATTATCTACTTGTGGA+CGG | 0.600561 | 3.4:+35970440 | None:intergenic |
| TGGCTCCTCCAAACTTGACA+TGG | 0.606063 | 3.4:+35970531 | None:intergenic |
| TTTCATCGTGTTTCTCCCTG+TGG | 0.606846 | 3.4:+35969201 | None:intergenic |
| TGGCTGTCCATATGCTAAGG+GGG | 0.610224 | 3.4:-35966282 | MS.gene90054:CDS |
| AGTCCAAGGACTATGACCAC+AGG | 0.615138 | 3.4:-35969217 | MS.gene90054:CDS |
| AGGTATGTATCATGCGTTGT+TGG | 0.615911 | 3.4:-35967446 | MS.gene90054:CDS |
| CTTGGTGACACAATTGGGGT+AGG | 0.625438 | 3.4:-35967338 | MS.gene90054:CDS |
| GAGGTGACTCTTTCAGTCCA+AGG | 0.626999 | 3.4:-35969231 | MS.gene90054:CDS |
| GGCATCAGGAAATGTAGCGA+CGG | 0.627133 | 3.4:-35966261 | MS.gene90054:CDS |
| ATAGATGGGAATAAGTGCTG+TGG | 0.633320 | 3.4:-35966327 | MS.gene90054:intron |
| AGATAGTTGAAGTTGGACCA+AGG | 0.636448 | 3.4:-35968862 | MS.gene90054:CDS |
| GAACCTCTGAACTCTGTCCA+TGG | 0.637112 | 3.4:+35970477 | None:intergenic |
| TTGGACTGAAAGAGTCACCT+CGG | 0.641749 | 3.4:+35969233 | None:intergenic |
| CTCACTTGGTGACACAATTG+GGG | 0.642342 | 3.4:-35967342 | MS.gene90054:CDS |
| TTGACTATACTGGTAATCTG+AGG | 0.644486 | 3.4:+35969150 | None:intergenic |
| GCTGCCAAGCATGAGTACCA+TGG | 0.664679 | 3.4:-35970494 | MS.gene90054:CDS |
| GTCCAAGGACTATGACCACA+GGG | 0.671076 | 3.4:-35969216 | MS.gene90054:CDS |
| TGGTAATCTGAGGTACAAAG+TGG | 0.671809 | 3.4:+35969160 | None:intergenic |
| CAAGCAGTTCATAACCTGAG+AGG | 0.688642 | 3.4:-35968237 | MS.gene90054:CDS |
| GTACCATGGACAGAGTTCAG+AGG | 0.731970 | 3.4:-35970480 | MS.gene90054:CDS |
| CAAACAAGAGACATGTCCCG+AGG | 0.735346 | 3.4:-35969250 | MS.gene90054:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAATATATTTTTTAAT+TGG | + | chr3.4:35969479-35969498 | None:intergenic | 0.0% |
| !! | AAATAAGAATAAGAAATAAA+AGG | + | chr3.4:35966637-35966656 | None:intergenic | 10.0% |
| !! | AAGTTAAATAAATATAACAA+AGG | + | chr3.4:35968006-35968025 | None:intergenic | 10.0% |
| !! | TCTATTAAATTATAATTCTT+TGG | - | chr3.4:35967656-35967675 | MS.gene90054:intron | 10.0% |
| !!! | ATCTATATTTTACATTTATA+GGG | - | chr3.4:35968571-35968590 | MS.gene90054:intron | 10.0% |
| !!! | TATCTATATTTTACATTTAT+AGG | - | chr3.4:35968570-35968589 | MS.gene90054:intron | 10.0% |
| !!! | TTTCATTTATTTTTGTTTAT+TGG | - | chr3.4:35969969-35969988 | MS.gene90054:intron | 10.0% |
| !! | TCTTATGCTATATATATAAT+TGG | + | chr3.4:35966464-35966483 | None:intergenic | 15.0% |
| !!! | AGATACTTAAATTTTTTAAC+TGG | - | chr3.4:35967777-35967796 | MS.gene90054:intron | 15.0% |
| !!! | GATACTTAAATTTTTTAACT+GGG | - | chr3.4:35967778-35967797 | MS.gene90054:intron | 15.0% |
| !!! | TCTATATTTTACATTTATAG+GGG | - | chr3.4:35968572-35968591 | MS.gene90054:intron | 15.0% |
| !! | ATATATAATTGGCAGATAAT+AGG | + | chr3.4:35966453-35966472 | None:intergenic | 20.0% |
| !! | ATCCTATAGAAAATATCAAA+TGG | + | chr3.4:35968875-35968894 | None:intergenic | 20.0% |
| !! | CAATTACTTGTATAGAAAAA+TGG | + | chr3.4:35969614-35969633 | None:intergenic | 20.0% |
| !! | TAAGAATAAGAAATAAAAGG+TGG | + | chr3.4:35966634-35966653 | None:intergenic | 20.0% |
| !! | TATCAAACGACTATAATTAA+TGG | - | chr3.4:35970066-35970085 | MS.gene90054:intron | 20.0% |
| !! | TCAAATGGGAAAAAAAAAAT+TGG | + | chr3.4:35968860-35968879 | None:intergenic | 20.0% |
| !! | TCCTATAGAAAATATCAAAT+GGG | + | chr3.4:35968874-35968893 | None:intergenic | 20.0% |
| !! | TTATTTGTGATCAACAAAAA+AGG | - | chr3.4:35968193-35968212 | MS.gene90054:intron | 20.0% |
| !! | TTGTTTGCATATAAATAGAT+GGG | - | chr3.4:35970358-35970377 | MS.gene90054:intron | 20.0% |
| !! | TTTGTTTGCATATAAATAGA+TGG | - | chr3.4:35970357-35970376 | MS.gene90054:intron | 20.0% |
| !!! | ACCATTACCTTTTAATTTAT+GGG | + | chr3.4:35968107-35968126 | None:intergenic | 20.0% |
| !!! | CATTTTGGAAGAAAATATAA+TGG | + | chr3.4:35968159-35968178 | None:intergenic | 20.0% |
| !!! | TACCATTACCTTTTAATTTA+TGG | + | chr3.4:35968108-35968127 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTAATCTTAATC+AGG | + | chr3.4:35970188-35970207 | None:intergenic | 20.0% |
| !!! | TGTAATCGTATCTTTTATAA+TGG | + | chr3.4:35968317-35968336 | None:intergenic | 20.0% |
| !!! | TGTGGATATTGTAAATTTTA+CGG | - | chr3.4:35969172-35969191 | MS.gene90054:CDS | 20.0% |
| !!! | TTATTATTTTAACTGTGATC+AGG | - | chr3.4:35969807-35969826 | MS.gene90054:intron | 20.0% |
| !!! | TTGATAGTTCATTCATTAAT+TGG | + | chr3.4:35970052-35970071 | None:intergenic | 20.0% |
| !!! | TTTTATATTAAAGTCGAACT+TGG | - | chr3.4:35969423-35969442 | MS.gene90054:intron | 20.0% |
| ! | AACTTGCAAGTATATTAAAG+TGG | + | chr3.4:35968805-35968824 | None:intergenic | 25.0% |
| ! | AAGTTTAAATTCATTGCAGT+TGG | - | chr3.4:35967718-35967737 | MS.gene90054:intron | 25.0% |
| ! | AATAAGAAATAAAAGGTGGT+GGG | + | chr3.4:35966630-35966649 | None:intergenic | 25.0% |
| ! | AATTCAATCTTTACATCTGT+TGG | + | chr3.4:35967893-35967912 | None:intergenic | 25.0% |
| ! | AATTGAAAGCAGAAATCAAA+GGG | - | chr3.4:35969629-35969648 | MS.gene90054:intron | 25.0% |
| ! | AATTTACAATATCCACACAA+AGG | + | chr3.4:35969169-35969188 | None:intergenic | 25.0% |
| ! | ACACATTACATATATAGAAG+AGG | + | chr3.4:35970019-35970038 | None:intergenic | 25.0% |
| ! | ATTAAAGTGGAGATATTTGA+TGG | + | chr3.4:35968792-35968811 | None:intergenic | 25.0% |
| ! | ATTTACAATATCCACACAAA+GGG | + | chr3.4:35969168-35969187 | None:intergenic | 25.0% |
| ! | GAGTTTCAAAAATACAAAGA+AGG | + | chr3.4:35969099-35969118 | None:intergenic | 25.0% |
| ! | GATATTATGAATCATTGTTG+TGG | - | chr3.4:35968038-35968057 | MS.gene90054:CDS | 25.0% |
| ! | GTTGAATGAAAAAAAACCAT+TGG | + | chr3.4:35966600-35966619 | None:intergenic | 25.0% |
| ! | GTTGATCACAAATAAAAACT+GGG | + | chr3.4:35968188-35968207 | None:intergenic | 25.0% |
| ! | TAATTGAAAGCAGAAATCAA+AGG | - | chr3.4:35969628-35969647 | MS.gene90054:intron | 25.0% |
| ! | TCAAACATTTAATTGAGACT+AGG | - | chr3.4:35969704-35969723 | MS.gene90054:intron | 25.0% |
| ! | TCCCATAAATTAAAAGGTAA+TGG | - | chr3.4:35968103-35968122 | MS.gene90054:CDS | 25.0% |
| ! | TCTCAATCCCATAAATTAAA+AGG | - | chr3.4:35968097-35968116 | MS.gene90054:CDS | 25.0% |
| ! | TGTTGATCACAAATAAAAAC+TGG | + | chr3.4:35968189-35968208 | None:intergenic | 25.0% |
| ! | TTCAGTTATAGAACAGAAAA+TGG | + | chr3.4:35968136-35968155 | None:intergenic | 25.0% |
| ! | TTGATCACAAATAAAAACTG+GGG | + | chr3.4:35968187-35968206 | None:intergenic | 25.0% |
| ! | TTTGTTAAGATAGTTGAAGT+TGG | - | chr3.4:35967830-35967849 | MS.gene90054:intron | 25.0% |
| !! | AAGCTATTTGTTAACTTACT+TGG | + | chr3.4:35969944-35969963 | None:intergenic | 25.0% |
| !! | AAGTCTTTGAAAATACGAAA+TGG | + | chr3.4:35969569-35969588 | None:intergenic | 25.0% |
| !! | AGAATGTTTAACTTTAAGCT+GGG | - | chr3.4:35970287-35970306 | MS.gene90054:intron | 25.0% |
| !! | GTGATTTTGTCATATTTCTT+TGG | - | chr3.4:35967740-35967759 | MS.gene90054:intron | 25.0% |
| !! | TAGAATGTTTAACTTTAAGC+TGG | - | chr3.4:35970286-35970305 | MS.gene90054:intron | 25.0% |
| !! | TATTTGTTAACTTACTTGGA+GGG | + | chr3.4:35969940-35969959 | None:intergenic | 25.0% |
| !! | TCAGAAAGAGTATGTATATT+CGG | + | chr3.4:35969783-35969802 | None:intergenic | 25.0% |
| !! | TCCCATTTGATATTTTCTAT+AGG | - | chr3.4:35968870-35968889 | MS.gene90054:CDS | 25.0% |
| !! | TGTTTGGATTGAATGATTTT+GGG | + | chr3.4:35968256-35968275 | None:intergenic | 25.0% |
| !!! | ATTGTTGTTTTGAGATGATT+TGG | - | chr3.4:35969061-35969080 | MS.gene90054:intron | 25.0% |
| !!! | TAGTTTTGTATCTCCTAAAT+GGG | - | chr3.4:35967958-35967977 | MS.gene90054:intron | 25.0% |
| !!! | TGTATTTTTGAAACTCAATC+AGG | - | chr3.4:35969103-35969122 | MS.gene90054:intron | 25.0% |
| AAATCCAAATCTGATGTACA+TGG | + | chr3.4:35970115-35970134 | None:intergenic | 30.0% | |
| AATACCATGTACATCAGATT+TGG | - | chr3.4:35970108-35970127 | MS.gene90054:intron | 30.0% | |
| AATTGAGACTAGGAAGAATT+GGG | - | chr3.4:35969714-35969733 | MS.gene90054:intron | 30.0% | |
| ACAAGTAGATAATTTGGGTA+TGG | - | chr3.4:35966265-35966284 | MS.gene90054:CDS | 30.0% | |
| AGGCATATAATATATACCTG+TGG | + | chr3.4:35967986-35968005 | None:intergenic | 30.0% | |
| ATAAGAAATAAAAGGTGGTG+GGG | + | chr3.4:35966629-35966648 | None:intergenic | 30.0% | |
| ATACCCAAATTATCTACTTG+TGG | + | chr3.4:35966266-35966285 | None:intergenic | 30.0% | |
| ATCAAAACCAACGTTGATAT+TGG | - | chr3.4:35970493-35970512 | MS.gene90054:CDS | 30.0% | |
| ATGAAAAAAAACCATTGGAG+AGG | + | chr3.4:35966595-35966614 | None:intergenic | 30.0% | |
| CAAGTAGATAATTTGGGTAT+GGG | - | chr3.4:35966266-35966285 | MS.gene90054:CDS | 30.0% | |
| CAGAAATCAAAGGGAAAATA+AGG | - | chr3.4:35969638-35969657 | MS.gene90054:intron | 30.0% | |
| CGTAGAATTTGATGTCTTAT+GGG | + | chr3.4:35969006-35969025 | None:intergenic | 30.0% | |
| GAATAAGAAATAAAAGGTGG+TGG | + | chr3.4:35966631-35966650 | None:intergenic | 30.0% | |
| GATAGTTGCACCTTTAAATT+AGG | + | chr3.4:35968510-35968529 | None:intergenic | 30.0% | |
| GGCATATAATATATACCTGT+GGG | + | chr3.4:35967985-35968004 | None:intergenic | 30.0% | |
| GTCATATTTCTTTGGTTAGT+TGG | - | chr3.4:35967748-35967767 | MS.gene90054:intron | 30.0% | |
| GTGCTGTATTTAAATTTGGT+AGG | - | chr3.4:35969233-35969252 | MS.gene90054:CDS | 30.0% | |
| TAACAAAGACATGCAAGATA+TGG | - | chr3.4:35967580-35967599 | MS.gene90054:intron | 30.0% | |
| TAATTGAGACTAGGAAGAAT+TGG | - | chr3.4:35969713-35969732 | MS.gene90054:intron | 30.0% | |
| TAGCATAAGACCATTTACAA+TGG | - | chr3.4:35966474-35966493 | MS.gene90054:intron | 30.0% | |
| TATGTATATTCGGGATTAAG+AGG | + | chr3.4:35969773-35969792 | None:intergenic | 30.0% | |
| TCAACTATCTTAACAAACTC+AGG | + | chr3.4:35967827-35967846 | None:intergenic | 30.0% | |
| TCAGTTATTAATGGCATTCT+TGG | - | chr3.4:35970334-35970353 | MS.gene90054:intron | 30.0% | |
| TCGTAGAATTTGATGTCTTA+TGG | + | chr3.4:35969007-35969026 | None:intergenic | 30.0% | |
| TCTGTTGTACTTATTCCAAT+CGG | - | chr3.4:35969211-35969230 | MS.gene90054:CDS | 30.0% | |
| TGATCACAAATAAAAACTGG+GGG | + | chr3.4:35968186-35968205 | None:intergenic | 30.0% | |
| TTCGATTTATGTCTTTCAGT+TGG | - | chr3.4:35968419-35968438 | MS.gene90054:intron | 30.0% | |
| TTTAAATTAGGAGTCAGAAC+TGG | + | chr3.4:35968498-35968517 | None:intergenic | 30.0% | |
| ! | AGCTAAAGCACTATATGATA+TGG | - | chr3.4:35969321-35969340 | MS.gene90054:intron | 30.0% |
| ! | AGTTCTGACTCCTAATTTAA+AGG | - | chr3.4:35968497-35968516 | MS.gene90054:intron | 30.0% |
| ! | CAGAAAGAGTATGTATATTC+GGG | + | chr3.4:35969782-35969801 | None:intergenic | 30.0% |
| ! | CTATTTGTTAACTTACTTGG+AGG | + | chr3.4:35969941-35969960 | None:intergenic | 30.0% |
| ! | CTGTTTGGATTGAATGATTT+TGG | + | chr3.4:35968257-35968276 | None:intergenic | 30.0% |
| ! | GCTAAAGCACTATATGATAT+GGG | - | chr3.4:35969322-35969341 | MS.gene90054:intron | 30.0% |
| ! | GTTTGGATTGAATGATTTTG+GGG | + | chr3.4:35968255-35968274 | None:intergenic | 30.0% |
| !! | AATTTAAATACAGCACCGAT+TGG | + | chr3.4:35969229-35969248 | None:intergenic | 30.0% |
| !! | ATCGGTGCTGTATTTAAATT+TGG | - | chr3.4:35969229-35969248 | MS.gene90054:CDS | 30.0% |
| !! | ATGTTGATGACCATTGTAAA+TGG | + | chr3.4:35966487-35966506 | None:intergenic | 30.0% |
| !!! | CTAGTTTTGTATCTCCTAAA+TGG | - | chr3.4:35967957-35967976 | MS.gene90054:intron | 30.0% |
| AAAAATGTATACCCTCGAAC+TGG | + | chr3.4:35968748-35968767 | None:intergenic | 35.0% | |
| AAATCGAATGACATTGAAGC+AGG | + | chr3.4:35968407-35968426 | None:intergenic | 35.0% | |
| AACCCAAGTTTGTGCTTAAT+TGG | + | chr3.4:35969508-35969527 | None:intergenic | 35.0% | |
| AACCCAATTAAGCACAAACT+TGG | - | chr3.4:35969502-35969521 | MS.gene90054:intron | 35.0% | |
| AAGACATCTGAATGTAAAGC+TGG | + | chr3.4:35968551-35968570 | None:intergenic | 35.0% | |
| AAGCACATATGGACAAAGTT+TGG | + | chr3.4:35966922-35966941 | None:intergenic | 35.0% | |
| AAGGTTAGACTATGTGCAAT+GGG | + | chr3.4:35967364-35967383 | None:intergenic | 35.0% | |
| AAGTTCATCTGACATTGAAC+TGG | - | chr3.4:35968955-35968974 | MS.gene90054:intron | 35.0% | |
| AAGTTTGTGCTTAATTGGGT+TGG | + | chr3.4:35969503-35969522 | None:intergenic | 35.0% | |
| ACCCAAGTTTGTGCTTAATT+GGG | + | chr3.4:35969507-35969526 | None:intergenic | 35.0% | |
| ACCCAATTAAGCACAAACTT+GGG | - | chr3.4:35969503-35969522 | MS.gene90054:intron | 35.0% | |
| AGTGGGTAACACATACTATT+TGG | - | chr3.4:35967017-35967036 | MS.gene90054:intron | 35.0% | |
| ATAGGTCAGTAATACATGAC+AGG | + | chr3.4:35966435-35966454 | None:intergenic | 35.0% | |
| ATATACTTGCAAGTTGCAAG+TGG | - | chr3.4:35968810-35968829 | MS.gene90054:CDS | 35.0% | |
| ATGGCATATAAGGTATGCAA+CGG | - | chr3.4:35967599-35967618 | MS.gene90054:intron | 35.0% | |
| ATGTCTTATGGGATAGCATT+AGG | + | chr3.4:35968995-35969014 | None:intergenic | 35.0% | |
| ATTCATAGACTAGCATCTAC+TGG | - | chr3.4:35967914-35967933 | MS.gene90054:intron | 35.0% | |
| ATTGAGACTAGGAAGAATTG+GGG | - | chr3.4:35969715-35969734 | MS.gene90054:intron | 35.0% | |
| CAGGAGTTACTGTAAAGTAA+AGG | + | chr3.4:35966416-35966435 | None:intergenic | 35.0% | |
| CATCACAGTGTACTTGATTA+AGG | + | chr3.4:35968375-35968394 | None:intergenic | 35.0% | |
| CATGCAAGATATGGCATATA+AGG | - | chr3.4:35967589-35967608 | MS.gene90054:intron | 35.0% | |
| CCAAATTATCTACTTGTGGA+CGG | + | chr3.4:35966262-35966281 | None:intergenic | 35.0% | |
| CCTGCAATCTTCTCTATATT+CGG | - | chr3.4:35968908-35968927 | MS.gene90054:intron | 35.0% | |
| CGAATATAGAGAAGATTGCA+GGG | + | chr3.4:35968910-35968929 | None:intergenic | 35.0% | |
| CGTCCACAAGTAGATAATTT+GGG | - | chr3.4:35966260-35966279 | MS.gene90054:CDS | 35.0% | |
| GAATCTGTTGGGAAGAAAAA+TGG | + | chr3.4:35968227-35968246 | None:intergenic | 35.0% | |
| GGAGACAAGAATATTTGGAA+GGG | + | chr3.4:35969919-35969938 | None:intergenic | 35.0% | |
| GTGTTGGGAATTGAAAAAGT+GGG | + | chr3.4:35966526-35966545 | None:intergenic | 35.0% | |
| TAAGGTTAGACTATGTGCAA+TGG | + | chr3.4:35967365-35967384 | None:intergenic | 35.0% | |
| TATACTTGCAAGTTGCAAGT+GGG | - | chr3.4:35968811-35968830 | MS.gene90054:CDS | 35.0% | |
| TCGGTAGTCTCAGTTATTAA+TGG | - | chr3.4:35970325-35970344 | MS.gene90054:intron | 35.0% | |
| TGCAATTCGTGATGAACATT+TGG | - | chr3.4:35966955-35966974 | MS.gene90054:intron | 35.0% | |
| TGTAACTGTTAAGACCTTGA+CGG | + | chr3.4:35969134-35969153 | None:intergenic | 35.0% | |
| TTAAGAGAGAGAAGATGATG+TGG | + | chr3.4:35966550-35966569 | None:intergenic | 35.0% | |
| TTCAACTTTAACCTCTCCAA+TGG | - | chr3.4:35966581-35966600 | MS.gene90054:intron | 35.0% | |
| TTCATAGACTAGCATCTACT+GGG | - | chr3.4:35967915-35967934 | MS.gene90054:intron | 35.0% | |
| TTGACTATACTGGTAATCTG+AGG | + | chr3.4:35967552-35967571 | None:intergenic | 35.0% | |
| ! | AAAACTGGGGGAAATCATTT+TGG | + | chr3.4:35968174-35968193 | None:intergenic | 35.0% |
| ! | AGATTTGGATTTTCTGCAGT+TGG | - | chr3.4:35970123-35970142 | MS.gene90054:intron | 35.0% |
| ! | AGTGTTGGGAATTGAAAAAG+TGG | + | chr3.4:35966527-35966546 | None:intergenic | 35.0% |
| ! | ATGGGAAACTGCTTTATTGA+AGG | - | chr3.4:35966284-35966303 | MS.gene90054:CDS | 35.0% |
| ! | TCATTTTGTAATCCATCCCT+TGG | + | chr3.4:35967857-35967876 | None:intergenic | 35.0% |
| ! | TGGGTCTGCATTTTATGATT+CGG | - | chr3.4:35970306-35970325 | MS.gene90054:intron | 35.0% |
| ! | TTTTTGCATGCCATGTGAAA+TGG | - | chr3.4:35967059-35967078 | MS.gene90054:intron | 35.0% |
| !! | ATTGAAAAAGTGGGTGTTGA+AGG | + | chr3.4:35966517-35966536 | None:intergenic | 35.0% |
| !! | TATTGCGCTTTTGACTATAC+TGG | + | chr3.4:35967562-35967581 | None:intergenic | 35.0% |
| !! | TTGAAAAAGTGGGTGTTGAA+GGG | + | chr3.4:35966516-35966535 | None:intergenic | 35.0% |
| !! | TTTTCTAGTCGTAAGGAATC+TGG | - | chr3.4:35970250-35970269 | MS.gene90054:intron | 35.0% |
| !!! | ACATAAGCTACTTTTGATGG+AGG | + | chr3.4:35969301-35969320 | None:intergenic | 35.0% |
| !!! | GCTACATAAGCTACTTTTGA+TGG | + | chr3.4:35969304-35969323 | None:intergenic | 35.0% |
| AACAAGGAAAACCAGTGCAA+TGG | + | chr3.4:35967322-35967341 | None:intergenic | 40.0% | |
| AACATTTGGATCACGCAACT+CGG | - | chr3.4:35966969-35966988 | MS.gene90054:intron | 40.0% | |
| AACTGGAATTGAGAGCTCTT+TGG | + | chr3.4:35968731-35968750 | None:intergenic | 40.0% | |
| AAGCCATCTAACTCATTACC+TGG | + | chr3.4:35969391-35969410 | None:intergenic | 40.0% | |
| AATGTAAAGCTGGCAACGTA+TGG | + | chr3.4:35968541-35968560 | None:intergenic | 40.0% | |
| AGATAGTTGAAGTTGGACCA+AGG | - | chr3.4:35967837-35967856 | MS.gene90054:intron | 40.0% | |
| AGGTATGTATCATGCGTTGT+TGG | - | chr3.4:35969253-35969272 | MS.gene90054:CDS | 40.0% | |
| CAGAAACATACCCTTGGAAA+AGG | - | chr3.4:35967426-35967445 | MS.gene90054:CDS | 40.0% | |
| CAGATCTAGTGAAGCACATA+TGG | + | chr3.4:35966933-35966952 | None:intergenic | 40.0% | |
| CCGAATATAGAGAAGATTGC+AGG | + | chr3.4:35968911-35968930 | None:intergenic | 40.0% | |
| CCGTCCACAAGTAGATAATT+TGG | - | chr3.4:35966259-35966278 | MS.gene90054:CDS | 40.0% | |
| GAGCTTTCCAATATCAACGT+TGG | + | chr3.4:35970503-35970522 | None:intergenic | 40.0% | |
| GATAGTTGAAGTTGGACCAA+GGG | - | chr3.4:35967838-35967857 | MS.gene90054:intron | 40.0% | |
| GATGTTGTGTACATGCTGAA+TGG | - | chr3.4:35970463-35970482 | MS.gene90054:CDS | 40.0% | |
| GCAATCTTCTCTATATTCGG+TGG | - | chr3.4:35968911-35968930 | MS.gene90054:intron | 40.0% | |
| GCATTCTGTGGCAGATTAAT+TGG | - | chr3.4:35967237-35967256 | MS.gene90054:intron | 40.0% | |
| GGGAGACAAGAATATTTGGA+AGG | + | chr3.4:35969920-35969939 | None:intergenic | 40.0% | |
| GTAAATGCGTAAGGTCTGTT+TGG | + | chr3.4:35968272-35968291 | None:intergenic | 40.0% | |
| GTCCACTTTCATGACACATA+CGG | - | chr3.4:35969888-35969907 | MS.gene90054:intron | 40.0% | |
| GTTTAACCTGACAGTCAACA+AGG | + | chr3.4:35967338-35967357 | None:intergenic | 40.0% | |
| TACTGGGTTATCTGTCATTG+AGG | - | chr3.4:35967931-35967950 | MS.gene90054:intron | 40.0% | |
| TCCACTTTCATGACACATAC+GGG | - | chr3.4:35969889-35969908 | MS.gene90054:intron | 40.0% | |
| TCTTCATTGTCTTCACTGCA+CGG | + | chr3.4:35967398-35967417 | None:intergenic | 40.0% | |
| TGGAGGGAGACAAGAATATT+TGG | + | chr3.4:35969924-35969943 | None:intergenic | 40.0% | |
| TGGATGAGAGAGAGGATTAA+CGG | + | chr3.4:35967271-35967290 | None:intergenic | 40.0% | |
| TGGGCAATGCAGTTTATGAA+AGG | - | chr3.4:35967797-35967816 | MS.gene90054:intron | 40.0% | |
| TTGGGGTGAATGAATCTGTT+GGG | + | chr3.4:35968238-35968257 | None:intergenic | 40.0% | |
| ! | ACGCACATGATTTGCAAAAG+TGG | - | chr3.4:35966999-35967018 | MS.gene90054:intron | 40.0% |
| ! | AGAAGATGATGTGGAGTGTT+GGG | + | chr3.4:35966541-35966560 | None:intergenic | 40.0% |
| ! | ATAGATGGGAATAAGTGCTG+TGG | - | chr3.4:35970372-35970391 | MS.gene90054:intron | 40.0% |
| ! | ATCTCACTTGGTGACACAAT+TGG | - | chr3.4:35969355-35969374 | MS.gene90054:intron | 40.0% |
| ! | CGCACATGATTTGCAAAAGT+GGG | - | chr3.4:35967000-35967019 | MS.gene90054:intron | 40.0% |
| ! | CTGCACGGAATATAGTCTTA+AGG | + | chr3.4:35967383-35967402 | None:intergenic | 40.0% |
| ! | GGTTGTTTCGAAATCTCACT+TGG | - | chr3.4:35969343-35969362 | MS.gene90054:intron | 40.0% |
| ! | TCTCACTTGGTGACACAATT+GGG | - | chr3.4:35969356-35969375 | MS.gene90054:intron | 40.0% |
| ! | TGGTAATCTGAGGTACAAAG+TGG | + | chr3.4:35967542-35967561 | None:intergenic | 40.0% |
| ! | TTTGGGGTGAATGAATCTGT+TGG | + | chr3.4:35968239-35968258 | None:intergenic | 40.0% |
| !! | AGCCAAAAGCATTGGAACTA+CGG | + | chr3.4:35969835-35969854 | None:intergenic | 40.0% |
| !! | CTCAGGATTTTCTAGTCGTA+AGG | - | chr3.4:35970243-35970262 | MS.gene90054:intron | 40.0% |
| !! | CTCTTGTTTGCCTTTTCCAA+GGG | + | chr3.4:35967439-35967458 | None:intergenic | 40.0% |
| !! | TCCAATGCTTTTGGCTGTAA+TGG | - | chr3.4:35969839-35969858 | MS.gene90054:intron | 40.0% |
| !! | TCTCTTGTTTGCCTTTTCCA+AGG | + | chr3.4:35967440-35967459 | None:intergenic | 40.0% |
| !!! | GTTTTGAGATGATTTGGCAC+TGG | - | chr3.4:35969067-35969086 | MS.gene90054:intron | 40.0% |
| AACTGCGCAGTAAATGCGTA+AGG | + | chr3.4:35968281-35968300 | None:intergenic | 45.0% | |
| ACACAGCAGAAACATACCCT+TGG | - | chr3.4:35967420-35967439 | MS.gene90054:CDS | 45.0% | |
| ACCTCTGTTGAATGAACTGC+TGG | + | chr3.4:35967291-35967310 | None:intergenic | 45.0% | |
| ACGCCAGGTAATGAGTTAGA+TGG | - | chr3.4:35969385-35969404 | MS.gene90054:intron | 45.0% | |
| AGAATGCTCGCCATTTCACA+TGG | + | chr3.4:35967178-35967197 | None:intergenic | 45.0% | |
| AGAGTTCAGAGGTTCTCATC+TGG | - | chr3.4:35966230-35966249 | MS.gene90054:CDS | 45.0% | |
| AGCTCTCAATTCCAGTTCGA+GGG | - | chr3.4:35968734-35968753 | MS.gene90054:CDS | 45.0% | |
| ATAGTGCTCGCCATTTCACA+TGG | + | chr3.4:35967072-35967091 | None:intergenic | 45.0% | |
| ATTGGAAAGCTCATGTCAGC+TGG | - | chr3.4:35970511-35970530 | MS.gene90054:CDS | 45.0% | |
| CAAGCAGTTCATAACCTGAG+AGG | - | chr3.4:35968462-35968481 | MS.gene90054:intron | 45.0% | |
| CATGTGAAAGTCCCTTTGTG+TGG | - | chr3.4:35969154-35969173 | MS.gene90054:CDS | 45.0% | |
| CTGCTAGAGATACATGACTC+TGG | - | chr3.4:35970216-35970235 | MS.gene90054:intron | 45.0% | |
| GAGAAGATGATGTGGAGTGT+TGG | + | chr3.4:35966542-35966561 | None:intergenic | 45.0% | |
| GCAGCAGTACTTTCTGTTCA+AGG | - | chr3.4:35967621-35967640 | MS.gene90054:intron | 45.0% | |
| GGGAGAAACACGATGAAATC+TGG | - | chr3.4:35967503-35967522 | MS.gene90054:intron | 45.0% | |
| GTGAAATGGCGAGCACTATT+TGG | - | chr3.4:35967073-35967092 | MS.gene90054:intron | 45.0% | |
| TACATGACTCTGGCAAACTC+AGG | - | chr3.4:35970226-35970245 | MS.gene90054:intron | 45.0% | |
| TATACCTGTGGGACCCATTT+AGG | + | chr3.4:35967974-35967993 | None:intergenic | 45.0% | |
| TCCAGCAGTTCATTCAACAG+AGG | - | chr3.4:35967287-35967306 | MS.gene90054:intron | 45.0% | |
| TTGGACTGAAAGAGTCACCT+CGG | + | chr3.4:35967469-35967488 | None:intergenic | 45.0% | |
| TTTCATCGTGTTTCTCCCTG+TGG | + | chr3.4:35967501-35967520 | None:intergenic | 45.0% | |
| ! | CACCGTAGTTCCAATGCTTT+TGG | - | chr3.4:35969830-35969849 | MS.gene90054:intron | 45.0% |
| ! | CTCACTTGGTGACACAATTG+GGG | - | chr3.4:35969357-35969376 | MS.gene90054:intron | 45.0% |
| ! | GATTCTTCAGTTGCTGGTCT+TGG | - | chr3.4:35970394-35970413 | MS.gene90054:CDS | 45.0% |
| ! | GCCATTACAGCCAAAAGCAT+TGG | + | chr3.4:35969843-35969862 | None:intergenic | 45.0% |
| ! | GTGTACATGCTGAATGGACT+TGG | - | chr3.4:35970469-35970488 | MS.gene90054:CDS | 45.0% |
| ! | TGGACAGCAAGCTTTTCTGT+TGG | + | chr3.4:35969873-35969892 | None:intergenic | 45.0% |
| !! | GGTTTTCCTTGTTGACTGTC+AGG | - | chr3.4:35967329-35967348 | MS.gene90054:intron | 45.0% |
| !!! | GCTACTTTTGATGGAGGAAC+TGG | + | chr3.4:35969295-35969314 | None:intergenic | 45.0% |
| ACAAGTGACAGCTCGATAGC+GGG | + | chr3.4:35968704-35968723 | None:intergenic | 50.0% | |
| AGTCCAAGGACTATGACCAC+AGG | - | chr3.4:35967482-35967501 | MS.gene90054:intron | 50.0% | |
| ATCTCCTAAATGGGTCCCAC+AGG | - | chr3.4:35967967-35967986 | MS.gene90054:CDS | 50.0% | |
| ATGTCAGCTGGCGACTTCAT+CGG | - | chr3.4:35970523-35970542 | MS.gene90054:CDS | 50.0% | |
| CAAACAAGAGACATGTCCCG+AGG | - | chr3.4:35967449-35967468 | MS.gene90054:intron | 50.0% | |
| CACAAGTGACAGCTCGATAG+CGG | + | chr3.4:35968705-35968724 | None:intergenic | 50.0% | |
| CATTCTGTGGCAATCCTGTG+CGG | - | chr3.4:35967192-35967211 | MS.gene90054:intron | 50.0% | |
| CTGTCCATGGTACTCATGCT+TGG | + | chr3.4:35966212-35966231 | None:intergenic | 50.0% | |
| GAACCTCTGAACTCTGTCCA+TGG | + | chr3.4:35966225-35966244 | None:intergenic | 50.0% | |
| GAGCTCTCAATTCCAGTTCG+AGG | - | chr3.4:35968733-35968752 | MS.gene90054:CDS | 50.0% | |
| GAGGAACTGGTCCTTCAACT+GGG | + | chr3.4:35969282-35969301 | None:intergenic | 50.0% | |
| GAGGTGACTCTTTCAGTCCA+AGG | - | chr3.4:35967468-35967487 | MS.gene90054:intron | 50.0% | |
| GCCCGTATGTGTCATGAAAG+TGG | + | chr3.4:35969893-35969912 | None:intergenic | 50.0% | |
| GCTGTGGATTCTTCAGTTGC+TGG | - | chr3.4:35970388-35970407 | MS.gene90054:CDS | 50.0% | |
| GGCATCAGGAAATGTAGCGA+CGG | - | chr3.4:35970438-35970457 | MS.gene90054:CDS | 50.0% | |
| GGTGGCTGTCCATATGCTAA+GGG | - | chr3.4:35970415-35970434 | MS.gene90054:CDS | 50.0% | |
| GGTTCAACATGCCATTGCAC+TGG | - | chr3.4:35967308-35967327 | MS.gene90054:intron | 50.0% | |
| GTACCATGGACAGAGTTCAG+AGG | - | chr3.4:35966219-35966238 | MS.gene90054:CDS | 50.0% | |
| GTCCAAGGACTATGACCACA+GGG | - | chr3.4:35967483-35967502 | MS.gene90054:intron | 50.0% | |
| GTGAAATGGCGAGCATTCTG+TGG | - | chr3.4:35967179-35967198 | MS.gene90054:intron | 50.0% | |
| GTGGCTGTCCATATGCTAAG+GGG | - | chr3.4:35970416-35970435 | MS.gene90054:CDS | 50.0% | |
| GTTGAAGTTGGACCAAGGGA+TGG | - | chr3.4:35967842-35967861 | MS.gene90054:intron | 50.0% | |
| GTTGTTGGATGCCCAGTTGA+AGG | - | chr3.4:35969268-35969287 | MS.gene90054:CDS | 50.0% | |
| TCAAGTTTGGAGGAGCCACT+TGG | - | chr3.4:35966173-35966192 | MS.gene90054:CDS | 50.0% | |
| TCAATCAGGTCAAGCCGTCA+AGG | - | chr3.4:35969117-35969136 | MS.gene90054:CDS | 50.0% | |
| TCATGCTTGGCAGCTTGTCA+TGG | + | chr3.4:35966199-35966218 | None:intergenic | 50.0% | |
| TGAACTGCTGGATGAGAGAG+AGG | + | chr3.4:35967279-35967298 | None:intergenic | 50.0% | |
| TGGACTGAAAGAGTCACCTC+GGG | + | chr3.4:35967468-35967487 | None:intergenic | 50.0% | |
| TGGCTGTCCATATGCTAAGG+GGG | - | chr3.4:35970417-35970436 | MS.gene90054:CDS | 50.0% | |
| TGGTGGCTGTCCATATGCTA+AGG | - | chr3.4:35970414-35970433 | MS.gene90054:CDS | 50.0% | |
| ! | CTTGGTGACACAATTGGGGT+AGG | - | chr3.4:35969361-35969380 | MS.gene90054:intron | 50.0% |
| ! | TTCTCTAGCTCCAGCAGCAA+CGG | + | chr3.4:35968608-35968627 | None:intergenic | 50.0% |
| !! | TCTTCAGTTGCTGGTCTTGG+TGG | - | chr3.4:35970397-35970416 | MS.gene90054:CDS | 50.0% |
| ATCTGCCACAGAATGCCACG+TGG | + | chr3.4:35967233-35967252 | None:intergenic | 55.0% | |
| CCTGATGCCCCCTTAGCATA+TGG | + | chr3.4:35970427-35970446 | None:intergenic | 55.0% | |
| CTCCCTGTGGTCATAGTCCT+TGG | + | chr3.4:35967488-35967507 | None:intergenic | 55.0% | |
| CTGGCAATCTGATGCCTCTC+AGG | + | chr3.4:35968479-35968498 | None:intergenic | 55.0% | |
| GCTGCCAAGCATGAGTACCA+TGG | - | chr3.4:35966205-35966224 | MS.gene90054:CDS | 55.0% | |
| GGAGGAACTGGTCCTTCAAC+TGG | + | chr3.4:35969283-35969302 | None:intergenic | 55.0% | |
| ! | TTTGAAGCTGCCGTTGCTGC+TGG | - | chr3.4:35968595-35968614 | MS.gene90054:intron | 55.0% |
| !! | CCATATGCTAAGGGGGCATC+AGG | - | chr3.4:35970424-35970443 | MS.gene90054:CDS | 55.0% |
| ACAATTGGGGTAGGCACGCC+AGG | - | chr3.4:35969370-35969389 | MS.gene90054:intron | 60.0% | |
| GGCAGCTTGTCATGGCCAAG+TGG | + | chr3.4:35966191-35966210 | None:intergenic | 60.0% | |
| TGCCACAGAATGCCACGTGG+CGG | + | chr3.4:35967230-35967249 | None:intergenic | 60.0% | |
| GGCGTGCAATTGGACCGCAC+AGG | + | chr3.4:35967209-35967228 | None:intergenic | 65.0% | |
| TCCAATTGCACGCCGCCACG+TGG | - | chr3.4:35967215-35967234 | MS.gene90054:intron | 65.0% | |
| CGCCGCCACGTGGCATTCTG+TGG | - | chr3.4:35967225-35967244 | MS.gene90054:intron | 70.0% | |
| GCCACGTGGCGGCGTGCAAT+TGG | + | chr3.4:35967219-35967238 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 35966170 | 35970551 | 35966170 | ID=MS.gene90054 |
| chr3.4 | mRNA | 35966170 | 35970551 | 35966170 | ID=MS.gene90054.t1;Parent=MS.gene90054 |
| chr3.4 | exon | 35970385 | 35970551 | 35970385 | ID=MS.gene90054.t1.exon1;Parent=MS.gene90054.t1 |
| chr3.4 | CDS | 35970385 | 35970551 | 35970385 | ID=cds.MS.gene90054.t1;Parent=MS.gene90054.t1 |
| chr3.4 | exon | 35969111 | 35969318 | 35969111 | ID=MS.gene90054.t1.exon2;Parent=MS.gene90054.t1 |
| chr3.4 | CDS | 35969111 | 35969318 | 35969111 | ID=cds.MS.gene90054.t1;Parent=MS.gene90054.t1 |
| chr3.4 | exon | 35968733 | 35968912 | 35968733 | ID=MS.gene90054.t1.exon3;Parent=MS.gene90054.t1 |
| chr3.4 | CDS | 35968733 | 35968912 | 35968733 | ID=cds.MS.gene90054.t1;Parent=MS.gene90054.t1 |
| chr3.4 | exon | 35968203 | 35968283 | 35968203 | ID=MS.gene90054.t1.exon4;Parent=MS.gene90054.t1 |
| chr3.4 | CDS | 35968203 | 35968283 | 35968203 | ID=cds.MS.gene90054.t1;Parent=MS.gene90054.t1 |
| chr3.4 | exon | 35967966 | 35968129 | 35967966 | ID=MS.gene90054.t1.exon5;Parent=MS.gene90054.t1 |
| chr3.4 | CDS | 35967966 | 35968129 | 35967966 | ID=cds.MS.gene90054.t1;Parent=MS.gene90054.t1 |
| chr3.4 | exon | 35967330 | 35967466 | 35967330 | ID=MS.gene90054.t1.exon6;Parent=MS.gene90054.t1 |
| chr3.4 | CDS | 35967330 | 35967466 | 35967330 | ID=cds.MS.gene90054.t1;Parent=MS.gene90054.t1 |
| chr3.4 | exon | 35966777 | 35966892 | 35966777 | ID=MS.gene90054.t1.exon7;Parent=MS.gene90054.t1 |
| chr3.4 | CDS | 35966777 | 35966892 | 35966777 | ID=cds.MS.gene90054.t1;Parent=MS.gene90054.t1 |
| chr3.4 | exon | 35966170 | 35966345 | 35966170 | ID=MS.gene90054.t1.exon8;Parent=MS.gene90054.t1 |
| chr3.4 | CDS | 35966170 | 35966345 | 35966170 | ID=cds.MS.gene90054.t1;Parent=MS.gene90054.t1 |
| Gene Sequence |
| Protein sequence |
