AlfalfaGEDB | MS.gene061218

M. sativa cultivar XinJiangDaYe / MS.gene061218

KEGG: -
GO: -
PFAM: PF04520.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061218.t1	XP_003610423.1	93.8	176	11	0	1	176	1	176	4.30E-88	334

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061218.t1	G7JJ63	93.8	176	11	0	1	176	1	176	3.1e-88	334.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049396	MS.gene061218	0.807248	5.54E-50	-1.69E-46
MS.gene050170	MS.gene061218	0.810608	1.06E-50	-1.69E-46
MS.gene050323	MS.gene061218	0.807056	6.09E-50	-1.69E-46
MS.gene050496	MS.gene061218	0.803871	2.83E-49	-1.69E-46
MS.gene050697	MS.gene061218	0.85185	6.78E-61	-1.69E-46
MS.gene050868	MS.gene061218	0.803338	3.66E-49	-1.69E-46
MS.gene050871	MS.gene061218	0.806978	6.33E-50	-1.69E-46
MS.gene051268	MS.gene061218	0.811038	8.55E-51	-1.69E-46
MS.gene052066	MS.gene061218	0.802288	6.02E-49	-1.69E-46
MS.gene05494	MS.gene061218	0.807494	4.92E-50	-1.69E-46
MS.gene055776	MS.gene061218	0.806609	7.57E-50	-1.69E-46
MS.gene056387	MS.gene061218	0.843808	1.12E-58	-1.69E-46
MS.gene056504	MS.gene061218	0.806924	6.49E-50	-1.69E-46
MS.gene060778	MS.gene061218	0.803235	3.84E-49	-1.69E-46
MS.gene06097	MS.gene061218	0.81588	7.37E-52	-1.69E-46
MS.gene061218	MS.gene061886	0.840736	7.26E-58	-1.69E-46
MS.gene061218	MS.gene061887	0.845122	4.94E-59	-1.69E-46
MS.gene061218	MS.gene062925	0.81388	2.05E-51	-1.69E-46
MS.gene061218	MS.gene063015	0.805113	1.56E-49	-1.69E-46
MS.gene061218	MS.gene063965	0.807792	4.25E-50	-1.69E-46
MS.gene061218	MS.gene064818	0.801774	7.68E-49	-1.69E-46
MS.gene061218	MS.gene064971	0.835616	1.51E-56	-1.69E-46
MS.gene061218	MS.gene06524	0.828009	1.14E-54	-1.69E-46
MS.gene061218	MS.gene065323	0.803338	3.66E-49	-1.69E-46
MS.gene061218	MS.gene065360	0.83314	6.33E-56	-1.69E-46
MS.gene061218	MS.gene066030	0.804671	1.93E-49	-1.69E-46
MS.gene061218	MS.gene06750	0.860065	2.68E-63	-1.69E-46
MS.gene061218	MS.gene06751	0.82926	5.69E-55	-1.69E-46
MS.gene061218	MS.gene06752	0.865344	6.32E-65	-1.69E-46
MS.gene061218	MS.gene06768	0.8128	3.53E-51	-1.69E-46
MS.gene061218	MS.gene068509	0.824259	8.89E-54	-1.69E-46
MS.gene061218	MS.gene073243	0.800258	1.57E-48	-1.69E-46
MS.gene061218	MS.gene073796	0.802309	5.96E-49	-1.69E-46
MS.gene061218	MS.gene074380	0.822583	2.19E-53	-1.69E-46
MS.gene061218	MS.gene08550	0.804312	2.29E-49	-1.69E-46
MS.gene061218	MS.gene08766	0.809774	1.60E-50	-1.69E-46
MS.gene061218	MS.gene09795	0.805496	1.30E-49	-1.69E-46
MS.gene061218	MS.gene09865	0.838272	3.17E-57	-1.69E-46
MS.gene061218	MS.gene20109	0.823006	1.75E-53	-1.69E-46
MS.gene061218	MS.gene20220	0.841823	3.76E-58	-1.69E-46
MS.gene061218	MS.gene22750	0.860003	2.80E-63	-1.69E-46
MS.gene061218	MS.gene23352	0.808084	3.68E-50	-1.69E-46
MS.gene061218	MS.gene24562	0.817393	3.38E-52	-1.69E-46
MS.gene061218	MS.gene28105	0.837653	4.58E-57	-1.69E-46
MS.gene061218	MS.gene28334	0.837884	3.99E-57	-1.69E-46
MS.gene061218	MS.gene28563	0.801737	7.82E-49	-1.69E-46
MS.gene061218	MS.gene30149	0.818725	1.69E-52	-1.69E-46
MS.gene061218	MS.gene30894	0.801055	1.08E-48	-1.69E-46
MS.gene061218	MS.gene32996	0.818696	1.71E-52	-1.69E-46
MS.gene061218	MS.gene33603	0.809241	2.09E-50	-1.69E-46
MS.gene061218	MS.gene35779	0.821423	4.07E-53	-1.69E-46
MS.gene061218	MS.gene39628	0.807528	4.84E-50	-1.69E-46
MS.gene061218	MS.gene44642	0.830524	2.80E-55	-1.69E-46
MS.gene061218	MS.gene46880	0.846033	2.80E-59	-1.69E-46
MS.gene061218	MS.gene48584	0.854819	9.55E-62	-1.69E-46
MS.gene061218	MS.gene48646	0.806075	9.81E-50	-1.69E-46
MS.gene061218	MS.gene48649	0.801426	9.06E-49	-1.69E-46
MS.gene061218	MS.gene49858	0.801647	8.16E-49	-1.69E-46
MS.gene061218	MS.gene49929	0.808013	3.82E-50	-1.69E-46
MS.gene061218	MS.gene50709	0.809387	1.94E-50	-1.69E-46
MS.gene061218	MS.gene52976	0.818871	1.56E-52	-1.69E-46
MS.gene061218	MS.gene53614	0.841509	4.55E-58	-1.69E-46
MS.gene061218	MS.gene54068	0.829375	5.33E-55	-1.69E-46
MS.gene061218	MS.gene57239	0.824444	8.04E-54	-1.69E-46
MS.gene061218	MS.gene61138	-0.803534	3.33E-49	-1.69E-46
MS.gene061218	MS.gene61985	0.99556	1.66E-217	-1.69E-46
MS.gene061218	MS.gene61986	0.992951	1.76E-196	-1.69E-46
MS.gene061218	MS.gene62080	0.970493	1.06E-131	-1.69E-46
MS.gene061218	MS.gene63020	0.801714	7.91E-49	-1.69E-46
MS.gene061218	MS.gene63452	0.838817	2.30E-57	-1.69E-46
MS.gene061218	MS.gene65812	0.808088	3.68E-50	-1.69E-46
MS.gene061218	MS.gene66611	0.817216	3.70E-52	-1.69E-46
MS.gene061218	MS.gene70359	0.855137	7.72E-62	-1.69E-46
MS.gene061218	MS.gene70461	0.840557	8.10E-58	-1.69E-46
MS.gene061218	MS.gene71300	0.829762	4.29E-55	-1.69E-46
MS.gene061218	MS.gene71420	0.810561	1.08E-50	-1.69E-46
MS.gene061218	MS.gene71651	0.831732	1.41E-55	-1.69E-46
MS.gene061218	MS.gene76840	0.840638	7.71E-58	-1.69E-46
MS.gene061218	MS.gene78396	0.809401	1.93E-50	-1.69E-46
MS.gene061218	MS.gene81988	0.862052	6.66E-64	-1.69E-46
MS.gene061218	MS.gene82707	0.820572	6.39E-53	-1.69E-46
MS.gene061218	MS.gene83251	0.804024	2.63E-49	-1.69E-46
MS.gene061218	MS.gene84140	0.855947	4.48E-62	-1.69E-46
MS.gene061218	MS.gene86102	0.805821	1.11E-49	-1.69E-46
MS.gene061218	MS.gene86293	0.817136	3.86E-52	-1.69E-46
MS.gene061218	MS.gene87054	0.802086	6.63E-49	-1.69E-46
MS.gene061218	MS.gene87666	0.800992	1.11E-48	-1.69E-46
MS.gene061218	MS.gene89722	0.804747	1.86E-49	-1.69E-46
MS.gene061218	MS.gene90054	0.803637	3.17E-49	-1.69E-46
MS.gene061218	MS.gene90512	0.802793	4.74E-49	-1.69E-46
MS.gene061218	MS.gene91597	0.85301	3.17E-61	-1.69E-46
MS.gene061218	MS.gene93192	0.821584	3.74E-53	-1.69E-46
MS.gene061218	MS.gene93738	0.884805	1.40E-71	-1.69E-46
MS.gene061218	MS.gene94356	0.840301	9.44E-58	-1.69E-46
MS.gene061218	MS.gene94986	0.833123	6.39E-56	-1.69E-46
MS.gene061218	MS.gene94987	0.818446	1.95E-52	-1.69E-46
MS.gene061218	MS.gene95715	0.815879	7.37E-52	-1.69E-46
MS.gene061218	MS.gene96072	0.805798	1.12E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061218.t1	MTR_4g132020	93.750	176	11	0	1	176	1	176	1.28e-120	338
MS.gene061218.t1	MTR_2g023070	51.142	219	63	7	1	176	1	218	1.72e-55	174
MS.gene061218.t1	MTR_7g101250	37.705	183	82	8	1	175	1	159	9.18e-21	84.0
MS.gene061218.t1	MTR_2g094410	55.952	84	30	2	97	174	72	154	5.01e-20	82.0
MS.gene061218.t1	MTR_4g059320	51.190	84	35	2	96	174	75	157	6.05e-18	76.6
MS.gene061218.t1	MTR_2g023390	50.602	83	36	3	97	174	72	154	1.78e-16	72.8
MS.gene061218.t1	MTR_2g086660	48.810	84	35	3	99	174	170	253	1.70e-15	72.0
MS.gene061218.t1	MTR_2g086660	48.193	83	35	3	99	173	170	252	1.35e-14	70.1
MS.gene061218.t1	MTR_3g052330	28.415	183	83	5	32	174	22	196	4.03e-14	67.4
MS.gene061218.t1	MTR_7g105130	65.217	46	13	1	132	174	170	215	7.70e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene061218.t1	AT1G11700	47.087	206	74	7	1	176	1	201	2.96e-45	148
MS.gene061218.t1	AT1G61930	48.529	204	76	9	1	176	1	203	4.11e-43	142
MS.gene061218.t1	AT4G21930	46.193	197	71	9	1	176	1	183	3.28e-38	129
MS.gene061218.t1	AT3G45210	56.757	74	30	2	101	174	75	146	8.07e-21	84.0
MS.gene061218.t1	AT5G60680	35.519	183	87	4	1	174	1	161	1.62e-19	80.9
MS.gene061218.t1	AT4G21970	47.059	85	37	3	98	174	59	143	8.31e-19	79.0
MS.gene061218.t1	AT5G03230	46.591	88	34	2	99	174	78	164	2.82e-17	75.1
MS.gene061218.t1	AT2G28400	48.889	90	35	3	96	175	73	161	3.90e-17	74.7
MS.gene061218.t1	AT4G04630	48.315	89	34	3	98	174	78	166	1.22e-14	68.2
MS.gene061218.t1	AT4G26950	34.146	164	76	8	21	174	1	142	9.05e-14	65.5
MS.gene061218.t1	AT4G26950	34.146	164	76	8	21	174	1	142	9.05e-14	65.5
MS.gene061218.t1	AT3G15040	59.184	49	17	1	129	174	193	241	3.42e-12	63.2
MS.gene061218.t1	AT1G29640	47.561	82	31	4	97	174	64	137	7.10e-12	60.5

Find 62 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCATGAAGTAACCGATTTC+AGG	0.232378	8.2:+2388498	MS.gene061218:CDS
GTCGCAAGCGTTTGAGAATC+AGG	0.306206	8.2:+2388628	MS.gene061218:CDS
CAATTTCTCTCCCGGCGATT+GGG	0.307565	8.2:+2388565	MS.gene061218:CDS
GGTTCCGCCGCATGAGTATT+TGG	0.311065	8.2:+2388808	MS.gene061218:CDS
TTTGGCGCGTGGCCGGAAAA+TGG	0.357971	8.2:+2388826	MS.gene061218:CDS
CCGGAAAATGGCGGCAAATT+CGG	0.361903	8.2:+2388838	MS.gene061218:CDS
CACATCTTCTTCCCTGAAAT+CGG	0.365661	8.2:-2388510	None:intergenic
AACCGAAACGAACGGTTGTT+AGG	0.366911	8.2:+2388446	MS.gene061218:CDS
CAACCGTTCGTTTCGGTTGG+TGG	0.379141	8.2:-2388441	None:intergenic
GGTGGAATCGTTGCATGATA+TGG	0.383426	8.2:+2388763	MS.gene061218:CDS
GGGGTGGGTCGGACCTTAAA+AGG	0.389495	8.2:+2388869	MS.gene061218:CDS
TTCCTAACAACCGTTCGTTT+CGG	0.395593	8.2:-2388448	None:intergenic
GTGCTGATGTTGCAACGTTC+CGG	0.398619	8.2:-2388697	None:intergenic
TCAATTTCTCTCCCGGCGAT+TGG	0.413239	8.2:+2388564	MS.gene061218:CDS
GACGGGTTCGTGATGCTGTT+TGG	0.413527	8.2:+2388903	MS.gene061218:CDS
CTCCAATCCGGCACGTTCAC+CGG	0.413829	8.2:-2388719	None:intergenic
CTCAACCATCGAACCCGGTT+TGG	0.416497	8.2:-2388928	None:intergenic
GATGCTGTTTGGAACCAAAC+CGG	0.441060	8.2:+2388914	MS.gene061218:CDS
ATGTTGCAACGTTCCGGTAC+TGG	0.447319	8.2:-2388691	None:intergenic
CACCGGTGAACGTGCCGGAT+TGG	0.454006	8.2:+2388717	MS.gene061218:CDS
GAATCGTTCACCACCAGTAC+CGG	0.485009	8.2:+2388678	MS.gene061218:CDS
ATGAGTATTTGGCGCGTGGC+CGG	0.490622	8.2:+2388819	MS.gene061218:CDS
ATGCTGTTTGGAACCAAACC+GGG	0.500659	8.2:+2388915	MS.gene061218:CDS
CGGAGTATCTTACTCCAATC+CGG	0.504693	8.2:-2388731	None:intergenic
TAAGATACTCCGAGTTGAAT+CGG	0.506960	8.2:+2388742	MS.gene061218:CDS
TCATGAAGTAACCGATTTCA+GGG	0.508081	8.2:+2388499	MS.gene061218:CDS
TAACAACCGTTCGTTTCGGT+TGG	0.515395	8.2:-2388444	None:intergenic
TGCGCGTGAATCCCAATCGC+CGG	0.518977	8.2:-2388576	None:intergenic
GATTCTCAAACGCTTGCGAC+AGG	0.525300	8.2:-2388625	None:intergenic
AAAAGGCCGTGATTTGAGAC+GGG	0.530895	8.2:+2388886	MS.gene061218:CDS
TATGGATGATGATAACGAAT+CGG	0.540008	8.2:+2388781	MS.gene061218:CDS
TGGAACCAAACCGGGTTCGA+TGG	0.549508	8.2:+2388923	MS.gene061218:CDS
CACAACGTCAATTTCTCTCC+CGG	0.549711	8.2:+2388557	MS.gene061218:CDS
TAAAAGGCCGTGATTTGAGA+CGG	0.552056	8.2:+2388885	MS.gene061218:CDS
GCGCGTGAATCCCAATCGCC+GGG	0.553493	8.2:-2388575	None:intergenic
GGTTACTTCATGAGTGGTGG+TGG	0.557686	8.2:-2388489	None:intergenic
ACGCTTGCGACAGGCCGCCG+TGG	0.563075	8.2:-2388616	None:intergenic
GTCGCTAAGTACCATGGCGA+AGG	0.565479	8.2:+2388406	None:intergenic
CACGAACCCGTCTCAAATCA+CGG	0.568944	8.2:-2388892	None:intergenic
TGATGATAACGAATCGGAGA+TGG	0.569605	8.2:+2388787	MS.gene061218:CDS
CAAACCGGGTTCGATGGTTG+AGG	0.576026	8.2:+2388929	MS.gene061218:CDS
GTGGTCACGATCTTCAACCA+TGG	0.577498	8.2:-2388537	None:intergenic
CGCGCCAAATACTCATGCGG+CGG	0.577795	8.2:-2388812	None:intergenic
ATCAGCACCGGTGAACGTGC+CGG	0.584228	8.2:+2388712	MS.gene061218:CDS
TCCACCTCAACCATCGAACC+CGG	0.586804	8.2:-2388933	None:intergenic
GGCGCGTGGCCGGAAAATGG+CGG	0.591649	8.2:+2388829	MS.gene061218:CDS
GAATTTGCGACCCTTCGCCA+TGG	0.599300	8.2:-2388417	None:intergenic
CCGCATGAGTATTTGGCGCG+TGG	0.607155	8.2:+2388815	MS.gene061218:CDS
GAACGTTGCAACATCAGCAC+CGG	0.627010	8.2:+2388700	MS.gene061218:CDS
GGAAGAAGATGTGTGGTCCA+TGG	0.635452	8.2:+2388520	MS.gene061218:CDS
ACGATTCCACCGATTCAACT+CGG	0.637845	8.2:-2388751	None:intergenic
TCGCTAAGTACCATGGCGAA+GGG	0.643376	8.2:+2388407	None:intergenic
CCACGCGCCAAATACTCATG+CGG	0.647845	8.2:-2388815	None:intergenic
ATCGGTTACTTCATGAGTGG+TGG	0.648620	8.2:-2388492	None:intergenic
CATTCACGTCGTCACAACCA+CGG	0.652333	8.2:+2388599	MS.gene061218:CDS
CGGGAGAGAAATTGACGTTG+TGG	0.653823	8.2:-2388556	None:intergenic
TCACCACCAACCGAAACGAA+CGG	0.658770	8.2:+2388438	MS.gene061218:CDS
TTGCAACGTTCCGGTACTGG+TGG	0.660475	8.2:-2388688	None:intergenic
GATACTCCGAGTTGAATCGG+TGG	0.676763	8.2:+2388745	MS.gene061218:CDS
GAAATCGGTTACTTCATGAG+TGG	0.682994	8.2:-2388495	None:intergenic
ATTTCAGGGAAGAAGATGTG+TGG	0.693930	8.2:+2388513	MS.gene061218:CDS
TCACGTCGTCACAACCACGG+CGG	0.789082	8.2:+2388602	MS.gene061218:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TATGGATGATGATAACGAAT+CGG	+	chr8.2:2388781-2388800	MS.gene061218:CDS	30.0%
!	TAAGATACTCCGAGTTGAAT+CGG	+	chr8.2:2388742-2388761	MS.gene061218:CDS	35.0%
!	TCATGAAGTAACCGATTTCA+GGG	+	chr8.2:2388499-2388518	MS.gene061218:CDS	35.0%
	ATTTCAGGGAAGAAGATGTG+TGG	+	chr8.2:2388513-2388532	MS.gene061218:CDS	40.0%
	CACATCTTCTTCCCTGAAAT+CGG	-	chr8.2:2388513-2388532	None:intergenic	40.0%
	GAAATCGGTTACTTCATGAG+TGG	-	chr8.2:2388498-2388517	None:intergenic	40.0%
	TAAAAGGCCGTGATTTGAGA+CGG	+	chr8.2:2388885-2388904	MS.gene061218:CDS	40.0%
	TTCCTAACAACCGTTCGTTT+CGG	-	chr8.2:2388451-2388470	None:intergenic	40.0%
!	CTCATGAAGTAACCGATTTC+AGG	+	chr8.2:2388498-2388517	MS.gene061218:CDS	40.0%
!	TCTCAAATCACGGCCTTTTA+AGG	-	chr8.2:2388885-2388904	None:intergenic	40.0%
!	TGATGATAACGAATCGGAGA+TGG	+	chr8.2:2388787-2388806	MS.gene061218:CDS	40.0%
	AACCGAAACGAACGGTTGTT+AGG	+	chr8.2:2388446-2388465	MS.gene061218:CDS	45.0%
	ATCGGTTACTTCATGAGTGG+TGG	-	chr8.2:2388495-2388514	None:intergenic	45.0%
	CACAACGTCAATTTCTCTCC+CGG	+	chr8.2:2388557-2388576	MS.gene061218:CDS	45.0%
	GGTGGAATCGTTGCATGATA+TGG	+	chr8.2:2388763-2388782	MS.gene061218:CDS	45.0%
	TAACAACCGTTCGTTTCGGT+TGG	-	chr8.2:2388447-2388466	None:intergenic	45.0%
!	AAAAGGCCGTGATTTGAGAC+GGG	+	chr8.2:2388886-2388905	MS.gene061218:CDS	45.0%
!	AAATTCGGTTTTCGAAGGGG+TGG	+	chr8.2:2388853-2388872	MS.gene061218:CDS	45.0%
!	AATTCGGTTTTCGAAGGGGT+GGG	+	chr8.2:2388854-2388873	MS.gene061218:CDS	45.0%
!	ATGCTGTTTGGAACCAAACC+GGG	+	chr8.2:2388915-2388934	MS.gene061218:CDS	45.0%
!	CGGAGTATCTTACTCCAATC+CGG	-	chr8.2:2388734-2388753	None:intergenic	45.0%
!	CGGCAAATTCGGTTTTCGAA+GGG	+	chr8.2:2388849-2388868	MS.gene061218:CDS	45.0%
!	GATGCTGTTTGGAACCAAAC+CGG	+	chr8.2:2388914-2388933	MS.gene061218:CDS	45.0%
!	GGCAAATTCGGTTTTCGAAG+GGG	+	chr8.2:2388850-2388869	MS.gene061218:CDS	45.0%
!!	ACGATTCCACCGATTCAACT+CGG	-	chr8.2:2388754-2388773	None:intergenic	45.0%
	ATGTTGCAACGTTCCGGTAC+TGG	-	chr8.2:2388694-2388713	None:intergenic	50.0%
	CAATTTCTCTCCCGGCGATT+GGG	+	chr8.2:2388565-2388584	MS.gene061218:CDS	50.0%
	CACGAACCCGTCTCAAATCA+CGG	-	chr8.2:2388895-2388914	None:intergenic	50.0%
	CATTCACGTCGTCACAACCA+CGG	+	chr8.2:2388599-2388618	MS.gene061218:CDS	50.0%
	CCGGAAAATGGCGGCAAATT+CGG	+	chr8.2:2388838-2388857	MS.gene061218:CDS	50.0%
	CGGGAGAGAAATTGACGTTG+TGG	-	chr8.2:2388559-2388578	None:intergenic	50.0%
	GAACGTTGCAACATCAGCAC+CGG	+	chr8.2:2388700-2388719	MS.gene061218:CDS	50.0%
	GAATCGTTCACCACCAGTAC+CGG	+	chr8.2:2388678-2388697	MS.gene061218:CDS	50.0%
	GATTCTCAAACGCTTGCGAC+AGG	-	chr8.2:2388628-2388647	None:intergenic	50.0%
	GGAAGAAGATGTGTGGTCCA+TGG	+	chr8.2:2388520-2388539	MS.gene061218:CDS	50.0%
	GGTTACTTCATGAGTGGTGG+TGG	-	chr8.2:2388492-2388511	None:intergenic	50.0%
	GTCGCAAGCGTTTGAGAATC+AGG	+	chr8.2:2388628-2388647	MS.gene061218:CDS	50.0%
	GTGGTCACGATCTTCAACCA+TGG	-	chr8.2:2388540-2388559	None:intergenic	50.0%
	TCAATTTCTCTCCCGGCGAT+TGG	+	chr8.2:2388564-2388583	MS.gene061218:CDS	50.0%
	TCACCACCAACCGAAACGAA+CGG	+	chr8.2:2388438-2388457	MS.gene061218:CDS	50.0%
!	GATACTCCGAGTTGAATCGG+TGG	+	chr8.2:2388745-2388764	MS.gene061218:CDS	50.0%
!	GCGGCAAATTCGGTTTTCGA+AGG	+	chr8.2:2388848-2388867	MS.gene061218:CDS	50.0%
!	GTGCTGATGTTGCAACGTTC+CGG	-	chr8.2:2388700-2388719	None:intergenic	50.0%
!!	CCGAATTTGCCGCCATTTTC+CGG	-	chr8.2:2388841-2388860	None:intergenic	50.0%
	ATGAGTATTTGGCGCGTGGC+CGG	+	chr8.2:2388819-2388838	MS.gene061218:CDS	55.0%
	CAACCGTTCGTTTCGGTTGG+TGG	-	chr8.2:2388444-2388463	None:intergenic	55.0%
	CCACGCGCCAAATACTCATG+CGG	-	chr8.2:2388818-2388837	None:intergenic	55.0%
	GGTTCCGCCGCATGAGTATT+TGG	+	chr8.2:2388808-2388827	MS.gene061218:CDS	55.0%
	TGGAACCAAACCGGGTTCGA+TGG	+	chr8.2:2388923-2388942	MS.gene061218:CDS	55.0%
!	GACGGGTTCGTGATGCTGTT+TGG	+	chr8.2:2388903-2388922	MS.gene061218:CDS	55.0%
!	TTGCAACGTTCCGGTACTGG+TGG	-	chr8.2:2388691-2388710	None:intergenic	55.0%
	CCGCATGAGTATTTGGCGCG+TGG	+	chr8.2:2388815-2388834	MS.gene061218:CDS	60.0%
	CGCGCCAAATACTCATGCGG+CGG	-	chr8.2:2388815-2388834	None:intergenic	60.0%
	CTCCAATCCGGCACGTTCAC+CGG	-	chr8.2:2388722-2388741	None:intergenic	60.0%
	GGGGTGGGTCGGACCTTAAA+AGG	+	chr8.2:2388869-2388888	MS.gene061218:CDS	60.0%
	TCACGTCGTCACAACCACGG+CGG	+	chr8.2:2388602-2388621	MS.gene061218:CDS	60.0%
	TGCGCGTGAATCCCAATCGC+CGG	-	chr8.2:2388579-2388598	None:intergenic	60.0%
	TTTGGCGCGTGGCCGGAAAA+TGG	+	chr8.2:2388826-2388845	MS.gene061218:CDS	60.0%
!	CGGTTTTCGAAGGGGTGGGT+CGG	+	chr8.2:2388858-2388877	MS.gene061218:CDS	60.0%
!!	ATCAGCACCGGTGAACGTGC+CGG	+	chr8.2:2388712-2388731	MS.gene061218:CDS	60.0%
	CACCGGTGAACGTGCCGGAT+TGG	+	chr8.2:2388717-2388736	MS.gene061218:CDS	65.0%
	GCGCGTGAATCCCAATCGCC+GGG	-	chr8.2:2388578-2388597	None:intergenic	65.0%
	GGCGCGTGGCCGGAAAATGG+CGG	+	chr8.2:2388829-2388848	MS.gene061218:CDS	70.0%
	ACGCTTGCGACAGGCCGCCG+TGG	-	chr8.2:2388619-2388638	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	2388419	2388949	2388419	ID=MS.gene061218
chr8.2	mRNA	2388419	2388949	2388419	ID=MS.gene061218.t1;Parent=MS.gene061218
chr8.2	exon	2388419	2388949	2388419	ID=MS.gene061218.t1.exon1;Parent=MS.gene061218.t1
chr8.2	CDS	2388419	2388949	2388419	ID=cds.MS.gene061218.t1;Parent=MS.gene061218.t1

Gene Sequence

>MS.gene061218

ATGGCGAAGGGTCGCAAATTCACCACCAACCGAAACGAACGGTTGTTAGGAACAAACTATATTCAAAGCTCCACCACCACTCATGAAGTAACCGATTTCAGGGAAGAAGATGTGTGGTCCATGGTTGAAGATCGTGACCACAACGTCAATTTCTCTCCCGGCGATTGGGATTCACGCGCACATTCACGTCGTCACAACCACGGCGGCCTGTCGCAAGCGTTTGAGAATCAGGTTAGTGATGTTGCGACTATGTCGTCGAGAATCGTTCACCACCAGTACCGGAACGTTGCAACATCAGCACCGGTGAACGTGCCGGATTGGAGTAAGATACTCCGAGTTGAATCGGTGGAATCGTTGCATGATATGGATGATGATAACGAATCGGAGATGGTTCCGCCGCATGAGTATTTGGCGCGTGGCCGGAAAATGGCGGCAAATTCGGTTTTCGAAGGGGTGGGTCGGACCTTAAAAGGCCGTGATTTGAGACGGGTTCGTGATGCTGTTTGGAACCAAACCGGGTTCGATGGTTGA

Protein sequence

>MS.gene061218.t1

MAKGRKFTTNRNERLLGTNYIQSSTTTHEVTDFREEDVWSMVEDRDHNVNFSPGDWDSRAHSRRHNHGGLSQAFENQVSDVATMSSRIVHHQYRNVATSAPVNVPDWSKILRVESVESLHDMDDDNESEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG