Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90109.t1 | XP_013470509.1 | 94.4 | 626 | 26 | 4 | 1 | 625 | 2 | 619 | 0.00E+00 | 1205.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90109.t1 | A1K5T6 | 50.5 | 551 | 227 | 9 | 86 | 625 | 4 | 519 | 1.0e-140 | 501.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90109.t1 | A0A072VRY6 | 94.4 | 626 | 26 | 4 | 1 | 625 | 2 | 619 | 0.0e+00 | 1205.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061089 | MS.gene90109 | -0.807929 | 3.98E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90109.t1 | MTR_1g116875 | 94.409 | 626 | 26 | 4 | 1 | 625 | 2 | 619 | 0.0 | 1225 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90109.t1 | AT5G13030 | 76.896 | 567 | 127 | 2 | 62 | 625 | 68 | 633 | 0.0 | 934 |
Find 159 sgRNAs with CRISPR-Local
Find 462 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATATGGAACAAAATTTA+TGG | 0.150312 | 1.4:-88452533 | MS.gene90109:CDS |
| CACAGATAATATGAGCATTT+TGG | 0.161328 | 1.4:-88452834 | MS.gene90109:CDS |
| CCTGGAAGGTCTGTGGTATT+TGG | 0.172714 | 1.4:+88452752 | None:intergenic |
| CTGGAAGGTCTGTGGTATTT+GGG | 0.211424 | 1.4:+88452753 | None:intergenic |
| GCTGCAGAAATCGGTGATTT+TGG | 0.217529 | 1.4:-88451708 | MS.gene90109:CDS |
| ACTATTGATTATGGTCCATT+TGG | 0.245144 | 1.4:-88452806 | MS.gene90109:CDS |
| TGGTAAACTTCTTACTAATA+TGG | 0.246433 | 1.4:-88452449 | MS.gene90109:CDS |
| CTTGGAAGGGGATCGGTTCT+TGG | 0.250230 | 1.4:+88457001 | None:intergenic |
| TCTAATAGCACTGACTTTAA+TGG | 0.257414 | 1.4:+88452337 | None:intergenic |
| CCTGGAAATTGTTCGTGTTT+TGG | 0.279406 | 1.4:-88455934 | MS.gene90109:CDS |
| TGCCACTACGAGGGTATAAA+TGG | 0.280750 | 1.4:+88457200 | None:intergenic |
| TTGGGTCTTACTATTGATTA+TGG | 0.283796 | 1.4:-88452815 | MS.gene90109:CDS |
| ATCTCGAGTAACCAACTTTC+CGG | 0.293228 | 1.4:+88456341 | None:intergenic |
| GTGGTATTTGGGGTAAATTT+AGG | 0.296888 | 1.4:+88452764 | None:intergenic |
| TAGTTCCTGAGAATATATTT+AGG | 0.297091 | 1.4:+88451753 | None:intergenic |
| TGCTATGGCGGACATCAATT+TGG | 0.308367 | 1.4:-88456591 | MS.gene90109:CDS |
| CTATTGATTATGGTCCATTT+GGG | 0.334050 | 1.4:-88452805 | MS.gene90109:CDS |
| CAATTATACCTCGTATATAT+AGG | 0.335469 | 1.4:+88452270 | None:intergenic |
| ATTGCACCCTGTTCTTCCTT+TGG | 0.341730 | 1.4:+88456032 | None:intergenic |
| ATAAAGTTGAAGATCTGAAT+TGG | 0.345823 | 1.4:-88457057 | MS.gene90109:CDS |
| TTTAGGATTTACCATATTCA+TGG | 0.358201 | 1.4:+88451770 | None:intergenic |
| AGGTGGGAGCTACAGCTTAA+AGG | 0.363726 | 1.4:-88456498 | MS.gene90109:CDS |
| TCTGGTGCATCACCTTTGCT+TGG | 0.365065 | 1.4:-88456633 | MS.gene90109:CDS |
| GAGGAAGACCACCATGAATA+TGG | 0.366062 | 1.4:-88451781 | MS.gene90109:CDS |
| CAGTGCTACGTAGCAGCATC+AGG | 0.376294 | 1.4:-88456434 | MS.gene90109:CDS |
| CTCCTCCGACGCGGCGGCGG+TGG | 0.378116 | 1.4:-88457235 | MS.gene90109:CDS |
| CAGGTCCTCATTACTACCTC+TGG | 0.386336 | 1.4:+88455953 | None:intergenic |
| CCAAAACACGAACAATTTCC+AGG | 0.391852 | 1.4:+88455934 | None:intergenic |
| TCGTAGGTTACTTAAATTAG+TGG | 0.396198 | 1.4:-88451679 | MS.gene90109:CDS |
| TCAGCTGTTTATTATACTTA+GGG | 0.396482 | 1.4:+88452473 | None:intergenic |
| GGCACTAACAATTCATCATC+TGG | 0.400026 | 1.4:+88452358 | None:intergenic |
| TGGGAATCCAAAGGAAGAAC+AGG | 0.400394 | 1.4:-88456039 | MS.gene90109:CDS |
| GGTATGTGGGCTGGCCAGTT+GGG | 0.400526 | 1.4:-88456570 | MS.gene90109:CDS |
| CGTTGCCGACTTACTTGACT+TGG | 0.402304 | 1.4:-88456783 | MS.gene90109:CDS |
| CCGCCATAGCATTGAGCATA+AGG | 0.404947 | 1.4:+88456603 | None:intergenic |
| TGAATGACTCTCACCTCTCT+TGG | 0.408759 | 1.4:+88456983 | None:intergenic |
| ATGGTAGAGCAATCACTCTT+GGG | 0.415418 | 1.4:-88456545 | MS.gene90109:CDS |
| CCGCGTCGGAGGAGTGAGTT+TGG | 0.416628 | 1.4:+88457244 | None:intergenic |
| AGAGAAAGAGCACGGGTTGT+TGG | 0.417418 | 1.4:+88456372 | None:intergenic |
| GACGCGGCGGCGGTGGCATA+AGG | 0.419806 | 1.4:-88457228 | MS.gene90109:CDS |
| CCACAGACCTTCCAGGTAGA+AGG | 0.424033 | 1.4:-88452745 | MS.gene90109:CDS |
| CCAAATACCACAGACCTTCC+AGG | 0.429861 | 1.4:-88452752 | MS.gene90109:CDS |
| TAAAGTTGAAGATCTGAATT+GGG | 0.432071 | 1.4:-88457056 | MS.gene90109:CDS |
| ATCAGCTGTTTATTATACTT+AGG | 0.433343 | 1.4:+88452472 | None:intergenic |
| CCTGGTCGATATGCCCATGC+TGG | 0.435594 | 1.4:+88451606 | None:intergenic |
| TCACTCCTCCGACGCGGCGG+CGG | 0.436088 | 1.4:-88457238 | MS.gene90109:CDS |
| CTGGTCGATATGCCCATGCT+GGG | 0.436470 | 1.4:+88451607 | None:intergenic |
| AAGTCAGTGCTATTAGATAT+TGG | 0.437899 | 1.4:-88452331 | MS.gene90109:CDS |
| TGGTATGTGGGCTGGCCAGT+TGG | 0.438275 | 1.4:-88456571 | MS.gene90109:CDS |
| TTCCATGATTGCTAGATGGC+AGG | 0.444903 | 1.4:-88452885 | MS.gene90109:CDS |
| GAGAAGAAAAGGGGAAAATC+AGG | 0.445633 | 1.4:+88456654 | None:intergenic |
| GTGATGCACCAGAGAAGAAA+AGG | 0.448708 | 1.4:+88456643 | None:intergenic |
| CCCCTGCCATCTAGCAATCA+TGG | 0.449694 | 1.4:+88452883 | None:intergenic |
| TTACTCATGTTCTCAATATG+AGG | 0.454798 | 1.4:+88455885 | None:intergenic |
| GCAATTGATGCTGCAGAAAT+CGG | 0.460683 | 1.4:-88451717 | MS.gene90109:CDS |
| CTGCTTCCATGATTGCTAGA+TGG | 0.469078 | 1.4:-88452889 | MS.gene90109:CDS |
| GATGGTAGAGCAATCACTCT+TGG | 0.471143 | 1.4:-88456546 | MS.gene90109:CDS |
| TCCATGATTGCTAGATGGCA+GGG | 0.472366 | 1.4:-88452884 | MS.gene90109:CDS |
| ATGATCCACAACTCGTTGTA+TGG | 0.474055 | 1.4:-88456814 | MS.gene90109:CDS |
| TTGCTCTACCATCACCCAAC+TGG | 0.476997 | 1.4:+88456556 | None:intergenic |
| AGCTACAGCTTAAAGGTGCT+GGG | 0.478291 | 1.4:-88456491 | MS.gene90109:CDS |
| GAGCTACAGCTTAAAGGTGC+TGG | 0.480131 | 1.4:-88456492 | MS.gene90109:CDS |
| ATTCCTGGCTGCTCATCAAA+AGG | 0.480253 | 1.4:+88451651 | None:intergenic |
| CTGCAGCATCAATTGCAGTC+TGG | 0.482061 | 1.4:+88451724 | None:intergenic |
| CGTAGTGGCAGTGGCATCGT+TGG | 0.492853 | 1.4:-88457187 | MS.gene90109:CDS |
| GCGGACATCAATTTGGTATG+TGG | 0.493664 | 1.4:-88456584 | MS.gene90109:CDS |
| TTGCCTTATGCTCAATGCTA+TGG | 0.495566 | 1.4:-88456606 | MS.gene90109:CDS |
| GTGAAGCAATGCATCACCTT+GGG | 0.497196 | 1.4:-88456398 | MS.gene90109:CDS |
| ACCAACCTGACATTGGTTTG+TGG | 0.499642 | 1.4:-88452709 | MS.gene90109:CDS |
| TAAATCCTAAATATATTCTC+AGG | 0.504170 | 1.4:-88451758 | MS.gene90109:CDS |
| TGGGCTGGCCAGTTGGGTGA+TGG | 0.505887 | 1.4:-88456564 | MS.gene90109:CDS |
| CACCTCTCTTGGAAGGGGAT+CGG | 0.508748 | 1.4:+88456994 | None:intergenic |
| AAAGAAGTACAAGCAGTTGT+TGG | 0.513245 | 1.4:+88457289 | None:intergenic |
| TCTTGTCACCACCGGAAAGT+TGG | 0.519286 | 1.4:-88456352 | MS.gene90109:CDS |
| TGCCACCGCCGCCGCGTCGG+AGG | 0.520075 | 1.4:+88457233 | None:intergenic |
| CATCAATTTGGTATGTGGGC+TGG | 0.520382 | 1.4:-88456579 | MS.gene90109:CDS |
| CCATGATTGCTAGATGGCAG+GGG | 0.520403 | 1.4:-88452883 | MS.gene90109:CDS |
| AATGATGGATTCAGCAGAGA+AGG | 0.523353 | 1.4:-88457158 | MS.gene90109:CDS |
| CAAAGAGGCTAACTATGCAT+TGG | 0.528156 | 1.4:-88452636 | MS.gene90109:CDS |
| CCATCGGCAAAGCGACTGTA+AGG | 0.528526 | 1.4:+88456462 | None:intergenic |
| CCTTACAGTCGCTTTGCCGA+TGG | 0.528989 | 1.4:-88456462 | MS.gene90109:CDS |
| AGATTCCACAAACCAATGTC+AGG | 0.532230 | 1.4:+88452704 | None:intergenic |
| GACTCTCACCTCTCTTGGAA+GGG | 0.532280 | 1.4:+88456988 | None:intergenic |
| CAGAGGTAGTAATGAGGACC+TGG | 0.533335 | 1.4:-88455952 | MS.gene90109:CDS |
| AAGTATAATAAACAGCTGAT+TGG | 0.534474 | 1.4:-88452469 | MS.gene90109:CDS |
| TTATACCCTCGTAGTGGCAG+TGG | 0.535527 | 1.4:-88457196 | MS.gene90109:CDS |
| CATCGTTGGATGCAGAATGA+TGG | 0.539465 | 1.4:-88457173 | MS.gene90109:CDS |
| TTATGCCACCGCCGCCGCGT+CGG | 0.540438 | 1.4:+88457230 | None:intergenic |
| TGACTCTCACCTCTCTTGGA+AGG | 0.541187 | 1.4:+88456987 | None:intergenic |
| GCTCTTTCTCTTGTCACCAC+CGG | 0.542597 | 1.4:-88456360 | MS.gene90109:CDS |
| CTTACATCAAACAAGTATGC+AGG | 0.545376 | 1.4:-88455810 | MS.gene90109:intron |
| TGATGCACCAGAGAAGAAAA+GGG | 0.555586 | 1.4:+88456644 | None:intergenic |
| TACTCAATTCTAACTCTCAA+AGG | 0.557576 | 1.4:-88456518 | MS.gene90109:CDS |
| GAGAGCTTATCTTTCAGCAC+GGG | 0.557997 | 1.4:-88455858 | MS.gene90109:CDS |
| CCAGCATGGGCATATCGACC+AGG | 0.558346 | 1.4:-88451606 | MS.gene90109:CDS |
| GCTGTTTATTATACTTAGGG+AGG | 0.564163 | 1.4:+88452476 | None:intergenic |
| TCCACAAACCAATGTCAGGT+TGG | 0.565880 | 1.4:+88452708 | None:intergenic |
| TCAATTCTAACTCTCAAAGG+TGG | 0.568353 | 1.4:-88456515 | MS.gene90109:CDS |
| TGGTCGATATGCCCATGCTG+GGG | 0.570038 | 1.4:+88451608 | None:intergenic |
| GTTTCTTCTTCTGATGAACA+AGG | 0.571299 | 1.4:+88457083 | None:intergenic |
| TTTGCAAACCAACCTGACAT+TGG | 0.573221 | 1.4:-88452716 | MS.gene90109:CDS |
| ACTCTCACCTCTCTTGGAAG+GGG | 0.575231 | 1.4:+88456989 | None:intergenic |
| TGTTCTCAATATGAGGAAAG+TGG | 0.577108 | 1.4:+88455892 | None:intergenic |
| TAAGGCAACGCTCCAAGCAA+AGG | 0.579997 | 1.4:+88456621 | None:intergenic |
| TACCTCTGGAGGCATGTAGT+TGG | 0.581249 | 1.4:+88455967 | None:intergenic |
| AACCGATCCCCTTCCAAGAG+AGG | 0.583369 | 1.4:-88456996 | MS.gene90109:intron |
| AACAGTACCTTCTACCTGGA+AGG | 0.587812 | 1.4:+88452738 | None:intergenic |
| GCAAAACAGTACCTTCTACC+TGG | 0.590125 | 1.4:+88452734 | None:intergenic |
| CATGATTGCTAGATGGCAGG+GGG | 0.594293 | 1.4:-88452882 | MS.gene90109:CDS |
| AGGCTAACTATGCATTGGAA+AGG | 0.594786 | 1.4:-88452631 | MS.gene90109:intron |
| CGGACATCAATTTGGTATGT+GGG | 0.598746 | 1.4:-88456583 | MS.gene90109:CDS |
| CAATTCTAACTCTCAAAGGT+GGG | 0.600171 | 1.4:-88456514 | MS.gene90109:CDS |
| ATGATGGATTCAGCAGAGAA+GGG | 0.602810 | 1.4:-88457157 | MS.gene90109:CDS |
| CACGGGTTGTTGGAATCCCA+AGG | 0.603470 | 1.4:+88456382 | None:intergenic |
| AGTGAAGCAATGCATCACCT+TGG | 0.603760 | 1.4:-88456399 | MS.gene90109:CDS |
| ATTATCCAAGTCAAGTAAGT+CGG | 0.605674 | 1.4:+88456778 | None:intergenic |
| CAAGTCAAGTAAGTCGGCAA+CGG | 0.606848 | 1.4:+88456784 | None:intergenic |
| TCAGACCATACAACGAGTTG+TGG | 0.608864 | 1.4:+88456809 | None:intergenic |
| CAAGAAAGCATGCATACACC+TGG | 0.609213 | 1.4:+88451588 | None:intergenic |
| TGGAAGGTCTGTGGTATTTG+GGG | 0.613085 | 1.4:+88452754 | None:intergenic |
| CACACTCTCAAATATTAAAG+CGG | 0.613117 | 1.4:-88452392 | MS.gene90109:CDS |
| TGGTGACAAGAGAAAGAGCA+CGG | 0.617950 | 1.4:+88456364 | None:intergenic |
| GTAAAGAAGCGTGGACAAGT+TGG | 0.620220 | 1.4:-88452300 | MS.gene90109:CDS |
| ACGTAGCACTGCAAGACCAT+CGG | 0.621214 | 1.4:+88456446 | None:intergenic |
| GATGCATTGCTTCACTGCAA+AGG | 0.621681 | 1.4:+88456406 | None:intergenic |
| GGGATCGGTTCTTGGATCAG+AGG | 0.623339 | 1.4:+88457009 | None:intergenic |
| CCTTCTACCTGGAAGGTCTG+TGG | 0.624629 | 1.4:+88452745 | None:intergenic |
| GTCAAGAGCGTAAAGAAGCG+TGG | 0.627350 | 1.4:-88452309 | MS.gene90109:CDS |
| GGATCGGTTCTTGGATCAGA+GGG | 0.629476 | 1.4:+88457010 | None:intergenic |
| TCATTTGATAAATGACAAAG+AGG | 0.633053 | 1.4:-88452651 | MS.gene90109:CDS |
| TGAGAGCTTATCTTTCAGCA+CGG | 0.634202 | 1.4:-88455859 | MS.gene90109:CDS |
| ACCTAAGCAGGCAACTCATG+AGG | 0.634942 | 1.4:+88451563 | None:intergenic |
| TGAAGAAGATCATTCTGTCG+TGG | 0.640885 | 1.4:-88455835 | MS.gene90109:CDS |
| TTCCATTTATACCCTCGTAG+TGG | 0.645721 | 1.4:-88457202 | MS.gene90109:CDS |
| GGTCGATATGCCCATGCTGG+GGG | 0.646118 | 1.4:+88451609 | None:intergenic |
| TGGTAGAGCAATCACTCTTG+GGG | 0.646632 | 1.4:-88456544 | MS.gene90109:CDS |
| AGGATTTACCATATTCATGG+TGG | 0.646641 | 1.4:+88451773 | None:intergenic |
| TGAGTTACAGAGTCAAGCAA+CGG | 0.647458 | 1.4:+88457124 | None:intergenic |
| GGATACAACGACAACAGACG+AGG | 0.648594 | 1.4:+88457265 | None:intergenic |
| GTGGCATTTCTGATGATCAG+AGG | 0.648909 | 1.4:-88451800 | MS.gene90109:CDS |
| AGTGCTACGTAGCAGCATCA+GGG | 0.657407 | 1.4:-88456433 | MS.gene90109:CDS |
| GTATTCTATATCAGCATGGG+CGG | 0.663034 | 1.4:-88452930 | MS.gene90109:intron |
| CCTTATGCTCAATGCTATGG+CGG | 0.663562 | 1.4:-88456603 | MS.gene90109:CDS |
| GGTGACAAGAGAAAGAGCAC+GGG | 0.663895 | 1.4:+88456365 | None:intergenic |
| CGATGCCACTGCCACTACGA+GGG | 0.666104 | 1.4:+88457191 | None:intergenic |
| TGCCTCCAGAGGTAGTAATG+AGG | 0.666249 | 1.4:-88455958 | MS.gene90109:CDS |
| AACTCACTCCTCCGACGCGG+CGG | 0.675677 | 1.4:-88457241 | MS.gene90109:CDS |
| GGATCATCTACTGCAACTGA+TGG | 0.679409 | 1.4:+88456830 | None:intergenic |
| GTCCTCATTACTACCTCTGG+AGG | 0.687126 | 1.4:+88455956 | None:intergenic |
| GATGCACCAGAGAAGAAAAG+GGG | 0.694066 | 1.4:+88456645 | None:intergenic |
| CACATGCAGTGGGAATCCAA+AGG | 0.701489 | 1.4:-88456048 | MS.gene90109:intron |
| TCGAGTAACCAACTTTCCGG+TGG | 0.702215 | 1.4:+88456344 | None:intergenic |
| GATACAACGACAACAGACGA+GGG | 0.702568 | 1.4:+88457266 | None:intergenic |
| TACCAACTACATGCCTCCAG+AGG | 0.702592 | 1.4:-88455969 | MS.gene90109:CDS |
| ACGATGCCACTGCCACTACG+AGG | 0.702995 | 1.4:+88457190 | None:intergenic |
| GGGAATCCAAAGGAAGAACA+GGG | 0.708027 | 1.4:-88456038 | MS.gene90109:CDS |
| AGAGGGTAAGTCTCTCACAA+AGG | 0.708435 | 1.4:+88457027 | None:intergenic |
| CCAAACTCACTCCTCCGACG+CGG | 0.739207 | 1.4:-88457244 | MS.gene90109:CDS |
| GTTGAAAACCTATATATACG+AGG | 0.773250 | 1.4:-88452278 | MS.gene90109:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGAATTAAATTTATTTG+TGG | - | chr1.4:88454370-88454389 | MS.gene90109:intron | 10.0% |
| !! | AAACTAATAGTAGTAATATA+AGG | - | chr1.4:88454279-88454298 | MS.gene90109:intron | 15.0% |
| !!! | AATAATTCTTAATTTTCAAG+TGG | - | chr1.4:88456667-88456686 | MS.gene90109:CDS | 15.0% |
| !!! | TAAACTACTATTTTTTTTGA+AGG | + | chr1.4:88454181-88454200 | None:intergenic | 15.0% |
| !!! | TAGTATTTTTTTTATTAGCA+TGG | - | chr1.4:88454344-88454363 | MS.gene90109:intron | 15.0% |
| !!! | TCTTAATTTTTTAGTTATCT+GGG | + | chr1.4:88453384-88453403 | None:intergenic | 15.0% |
| !!! | TGGTTTTTTTCTTAAATAAA+AGG | + | chr1.4:88454140-88454159 | None:intergenic | 15.0% |
| !!! | TTCTTAATTTTTTAGTTATC+TGG | + | chr1.4:88453385-88453404 | None:intergenic | 15.0% |
| !! | AAATCAACAATTTGTGAAAA+GGG | + | chr1.4:88456926-88456945 | None:intergenic | 20.0% |
| !! | AATACCATTAAAAAGAACAA+AGG | + | chr1.4:88455931-88455950 | None:intergenic | 20.0% |
| !! | CAATTTAAGAAATTACTAAC+TGG | + | chr1.4:88455608-88455627 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAAACTACTAT+TGG | + | chr1.4:88454160-88454179 | None:intergenic | 20.0% |
| !! | GTCACTAGTAAAATAATAAA+TGG | + | chr1.4:88455822-88455841 | None:intergenic | 20.0% |
| !! | TAAATCCTAAATATATTCTC+AGG | - | chr1.4:88457118-88457137 | MS.gene90109:CDS | 20.0% |
| !! | TATGTTACTAATCTCTAATT+AGG | + | chr1.4:88454513-88454532 | None:intergenic | 20.0% |
| !!! | AAAAGGTTTTAAGTGAATAA+CGG | + | chr1.4:88453800-88453819 | None:intergenic | 20.0% |
| !!! | AAATCCTTTGTTCTTTTTAA+TGG | - | chr1.4:88455924-88455943 | MS.gene90109:CDS | 20.0% |
| !!! | ACAATTTTGACTCTAAAAAA+AGG | + | chr1.4:88453817-88453836 | None:intergenic | 20.0% |
| !!! | CATGAATTTTGTAATGTTTA+AGG | - | chr1.4:88454317-88454336 | MS.gene90109:intron | 20.0% |
| !!! | GTAAAATAATTCTTTTAGGA+GGG | - | chr1.4:88453088-88453107 | MS.gene90109:intron | 20.0% |
| !!! | TAAAATAATTCTTTTAGGAG+GGG | - | chr1.4:88453089-88453108 | MS.gene90109:intron | 20.0% |
| !!! | TAATAATTTAATTTGCTTGC+AGG | - | chr1.4:88451994-88452013 | MS.gene90109:intron | 20.0% |
| !!! | TAGTGAAACTTTTTTTATCT+TGG | - | chr1.4:88454742-88454761 | MS.gene90109:intron | 20.0% |
| !!! | TCTGTTATCTTCATTTTTAT+GGG | - | chr1.4:88455847-88455866 | MS.gene90109:CDS | 20.0% |
| !!! | TTATTTTCTGCTTAATTGTT+TGG | - | chr1.4:88454864-88454883 | MS.gene90109:intron | 20.0% |
| !!! | TTCTGTTATCTTCATTTTTA+TGG | - | chr1.4:88455846-88455865 | MS.gene90109:CDS | 20.0% |
| ! | AAGAATGAATGAGGAAATTA+GGG | + | chr1.4:88453263-88453282 | None:intergenic | 25.0% |
| ! | AAGTATAATAAACAGCTGAT+TGG | - | chr1.4:88456407-88456426 | MS.gene90109:CDS | 25.0% |
| ! | AGAACATTTATGCTTATATG+CGG | + | chr1.4:88454578-88454597 | None:intergenic | 25.0% |
| ! | ATAAAGTTGAAGATCTGAAT+TGG | - | chr1.4:88451819-88451838 | MS.gene90109:intron | 25.0% |
| ! | ATCAGCTGTTTATTATACTT+AGG | + | chr1.4:88456407-88456426 | None:intergenic | 25.0% |
| ! | ATCATATCATAGTATGATGA+AGG | + | chr1.4:88454804-88454823 | None:intergenic | 25.0% |
| ! | CAAATCAACAATTTGTGAAA+AGG | + | chr1.4:88456927-88456946 | None:intergenic | 25.0% |
| ! | CAATTATACCTCGTATATAT+AGG | + | chr1.4:88456609-88456628 | None:intergenic | 25.0% |
| ! | CAGATATGGAACAAAATTTA+TGG | - | chr1.4:88456343-88456362 | MS.gene90109:CDS | 25.0% |
| ! | CTTAAATAAAAGGTCAAAAG+AGG | + | chr1.4:88454130-88454149 | None:intergenic | 25.0% |
| ! | GCATAAATGTTCTAATTGTA+AGG | - | chr1.4:88454585-88454604 | MS.gene90109:intron | 25.0% |
| ! | TAAAGTTGAAGATCTGAATT+GGG | - | chr1.4:88451820-88451839 | MS.gene90109:intron | 25.0% |
| ! | TACTTGTTTGTTTGTTTGTT+TGG | + | chr1.4:88452738-88452757 | None:intergenic | 25.0% |
| ! | TAGTTCCTGAGAATATATTT+AGG | + | chr1.4:88457126-88457145 | None:intergenic | 25.0% |
| ! | TCAGCTGTTTATTATACTTA+GGG | + | chr1.4:88456406-88456425 | None:intergenic | 25.0% |
| ! | TCATTTGATAAATGACAAAG+AGG | - | chr1.4:88456225-88456244 | MS.gene90109:intron | 25.0% |
| ! | TGGTAAACTTCTTACTAATA+TGG | - | chr1.4:88456427-88456446 | MS.gene90109:CDS | 25.0% |
| ! | TTAGTTTATTACTCAAGTAG+TGG | + | chr1.4:88454266-88454285 | None:intergenic | 25.0% |
| ! | TTGTTAGTCAAGATTTATGT+GGG | - | chr1.4:88454029-88454048 | MS.gene90109:intron | 25.0% |
| ! | TTTGTTAGTCAAGATTTATG+TGG | - | chr1.4:88454028-88454047 | MS.gene90109:intron | 25.0% |
| !! | ACAGATAATATGAGCATTTT+GGG | - | chr1.4:88456043-88456062 | MS.gene90109:intron | 25.0% |
| !! | ACTGAATAAACACTTTTGAT+TGG | - | chr1.4:88453190-88453209 | MS.gene90109:intron | 25.0% |
| !! | GATTGGTTATTTCACTTATT+TGG | - | chr1.4:88453207-88453226 | MS.gene90109:intron | 25.0% |
| !! | GCAGGTAAAATAATTCTTTT+AGG | - | chr1.4:88453084-88453103 | MS.gene90109:intron | 25.0% |
| !! | GGTAAAATAATTCTTTTAGG+AGG | - | chr1.4:88453087-88453106 | MS.gene90109:intron | 25.0% |
| !! | TGAATTTTTCTCCTATAAAG+AGG | + | chr1.4:88456304-88456323 | None:intergenic | 25.0% |
| !! | TTGTGTATGATTTTGTAATG+TGG | - | chr1.4:88455668-88455687 | MS.gene90109:intron | 25.0% |
| !! | TTTAGGATTTACCATATTCA+TGG | + | chr1.4:88457109-88457128 | None:intergenic | 25.0% |
| !!! | AAACTTTTTTTATCTTGGAG+TGG | - | chr1.4:88454747-88454766 | MS.gene90109:intron | 25.0% |
| !!! | ATACCTTTTGAAATTTTGCT+TGG | - | chr1.4:88456854-88456873 | MS.gene90109:CDS | 25.0% |
| !!! | ATTTTAGTTTGCATTAAGCT+CGG | + | chr1.4:88453334-88453353 | None:intergenic | 25.0% |
| !!! | TAATTTTCAAGTGGCATAAT+CGG | - | chr1.4:88456676-88456695 | MS.gene90109:intron | 25.0% |
| !!! | TTTGGTATTTTTGAAGTGAT+TGG | + | chr1.4:88455723-88455742 | None:intergenic | 25.0% |
| !!! | TTTTGAAATTTTGCTTGGTT+GGG | - | chr1.4:88456859-88456878 | MS.gene90109:CDS | 25.0% |
| AAACCAAACACTGAAATAGA+AGG | + | chr1.4:88454988-88455007 | None:intergenic | 30.0% | |
| AAATTGGTGTGTTTAGACTA+TGG | - | chr1.4:88455285-88455304 | MS.gene90109:intron | 30.0% | |
| AATCCGTCATTCATAACATT+GGG | + | chr1.4:88453460-88453479 | None:intergenic | 30.0% | |
| AATGGTATTCTATATCAGCA+TGG | - | chr1.4:88455942-88455961 | MS.gene90109:CDS | 30.0% | |
| AATTACTAACTGGACCATAT+AGG | + | chr1.4:88455598-88455617 | None:intergenic | 30.0% | |
| ACAATTTGTGAAAAGGGAAA+AGG | + | chr1.4:88456920-88456939 | None:intergenic | 30.0% | |
| ACCTTTATATGTGAAGAGTT+GGG | - | chr1.4:88455320-88455339 | MS.gene90109:intron | 30.0% | |
| AGAAAAATTCACCTTATGGT+TGG | - | chr1.4:88456313-88456332 | MS.gene90109:intron | 30.0% | |
| ATGAAAGGAGATTGTTTATG+CGG | - | chr1.4:88453972-88453991 | MS.gene90109:intron | 30.0% | |
| ATGGTATTCTATATCAGCAT+GGG | - | chr1.4:88455943-88455962 | MS.gene90109:CDS | 30.0% | |
| ATTATCCAAGTCAAGTAAGT+CGG | + | chr1.4:88452101-88452120 | None:intergenic | 30.0% | |
| CAACCAAGCAAAATTTCAAA+AGG | + | chr1.4:88456860-88456879 | None:intergenic | 30.0% | |
| CAAGAATGAATGAGGAAATT+AGG | + | chr1.4:88453264-88453283 | None:intergenic | 30.0% | |
| CACACTCTCAAATATTAAAG+CGG | - | chr1.4:88456484-88456503 | MS.gene90109:CDS | 30.0% | |
| GAGATTAGTAACATAACTGT+AGG | - | chr1.4:88454518-88454537 | MS.gene90109:intron | 30.0% | |
| GATATAATGACCAAAAAGCT+TGG | - | chr1.4:88456377-88456396 | MS.gene90109:CDS | 30.0% | |
| GGACAACTGTAAAAATAAGA+TGG | + | chr1.4:88455439-88455458 | None:intergenic | 30.0% | |
| GTTGAAAACCTATATATACG+AGG | - | chr1.4:88456598-88456617 | MS.gene90109:CDS | 30.0% | |
| TAAATCAATTGTGACCAAGA+TGG | - | chr1.4:88457000-88457019 | MS.gene90109:CDS | 30.0% | |
| TAACGAAAATTGAGGTGAAA+AGG | + | chr1.4:88453118-88453137 | None:intergenic | 30.0% | |
| TAACTACATAAGACAGAGTT+TGG | + | chr1.4:88455741-88455760 | None:intergenic | 30.0% | |
| TAATCCGTCATTCATAACAT+TGG | + | chr1.4:88453461-88453480 | None:intergenic | 30.0% | |
| TACCTTTATATGTGAAGAGT+TGG | - | chr1.4:88455319-88455338 | MS.gene90109:intron | 30.0% | |
| TACTCAATTCTAACTCTCAA+AGG | - | chr1.4:88452358-88452377 | MS.gene90109:CDS | 30.0% | |
| TAGAGTCAAAATTGTACGAT+CGG | - | chr1.4:88453822-88453841 | MS.gene90109:intron | 30.0% | |
| TAGGAGAAAAATTCACCTTA+TGG | - | chr1.4:88456309-88456328 | MS.gene90109:intron | 30.0% | |
| TATCCAACACTAAGAATAAC+TGG | + | chr1.4:88455505-88455524 | None:intergenic | 30.0% | |
| TCAACACTAATGACAAAAAC+AGG | + | chr1.4:88454916-88454935 | None:intergenic | 30.0% | |
| TCGTAGGTTACTTAAATTAG+TGG | - | chr1.4:88457197-88457216 | MS.gene90109:CDS | 30.0% | |
| TTACTCATGTTCTCAATATG+AGG | + | chr1.4:88452994-88453013 | None:intergenic | 30.0% | |
| TTAGTAACATAACTGTAGGA+CGG | - | chr1.4:88454522-88454541 | MS.gene90109:intron | 30.0% | |
| TTGAAGATGCATACTATCAT+TGG | - | chr1.4:88456744-88456763 | MS.gene90109:intron | 30.0% | |
| TTGTTAAATAGCAATCGTGA+CGG | + | chr1.4:88453610-88453629 | None:intergenic | 30.0% | |
| TTTAGTCCTAACGAAAATTG+AGG | + | chr1.4:88453126-88453145 | None:intergenic | 30.0% | |
| ! | AAAAATAAGATGGACTTGGT+GGG | + | chr1.4:88455429-88455448 | None:intergenic | 30.0% |
| ! | AAGTCAGTGCTATTAGATAT+TGG | - | chr1.4:88456545-88456564 | MS.gene90109:CDS | 30.0% |
| ! | ACTATTGATTATGGTCCATT+TGG | - | chr1.4:88456070-88456089 | MS.gene90109:intron | 30.0% |
| ! | ATTATTTTCTACAAGTGCCT+TGG | + | chr1.4:88456653-88456672 | None:intergenic | 30.0% |
| ! | CACAGATAATATGAGCATTT+TGG | - | chr1.4:88456042-88456061 | MS.gene90109:CDS | 30.0% |
| ! | CTATTGATTATGGTCCATTT+GGG | - | chr1.4:88456071-88456090 | MS.gene90109:intron | 30.0% |
| ! | CTCAATCTTTTCTTCGTTTT+GGG | - | chr1.4:88452881-88452900 | MS.gene90109:CDS | 30.0% |
| ! | CTGTAAAAATAAGATGGACT+TGG | + | chr1.4:88455433-88455452 | None:intergenic | 30.0% |
| ! | CTTTTATTACTTTCACTGCA+TGG | - | chr1.4:88454104-88454123 | MS.gene90109:intron | 30.0% |
| ! | GTTATTCTTAGTGTTGGATA+CGG | - | chr1.4:88455505-88455524 | MS.gene90109:intron | 30.0% |
| ! | TAAAAATAAGATGGACTTGG+TGG | + | chr1.4:88455430-88455449 | None:intergenic | 30.0% |
| ! | TTATTCTTAGTGTTGGATAC+GGG | - | chr1.4:88455506-88455525 | MS.gene90109:intron | 30.0% |
| ! | TTGGGTCTTACTATTGATTA+TGG | - | chr1.4:88456061-88456080 | MS.gene90109:intron | 30.0% |
| ! | TTGTTTGTTTGGTGAAGTAA+TGG | + | chr1.4:88452727-88452746 | None:intergenic | 30.0% |
| ! | TTTTAAGCCCATTATACTCT+CGG | + | chr1.4:88454074-88454093 | None:intergenic | 30.0% |
| ! | TTTTCACCTCAATTTTCGTT+AGG | - | chr1.4:88453117-88453136 | MS.gene90109:intron | 30.0% |
| !! | CTTTTTGAAAGTAGTGAATG+AGG | - | chr1.4:88455638-88455657 | MS.gene90109:intron | 30.0% |
| !! | TCTAATAGCACTGACTTTAA+TGG | + | chr1.4:88456542-88456561 | None:intergenic | 30.0% |
| !! | TCTTTGAAATCTGAAATGGA+GGG | + | chr1.4:88452202-88452221 | None:intergenic | 30.0% |
| !! | TGTTTTTGTCATTAGTGTTG+AGG | - | chr1.4:88454915-88454934 | MS.gene90109:intron | 30.0% |
| !!! | AATCGGTGTCATAAAGTTTT+TGG | - | chr1.4:88456693-88456712 | MS.gene90109:intron | 30.0% |
| !!! | CTTTTGAAATTTTGCTTGGT+TGG | - | chr1.4:88456858-88456877 | MS.gene90109:CDS | 30.0% |
| !!! | TTTTAGTTTGCATTAAGCTC+GGG | + | chr1.4:88453333-88453352 | None:intergenic | 30.0% |
| AATTGTTTGGTATCTCCTTC+TGG | - | chr1.4:88454877-88454896 | MS.gene90109:intron | 35.0% | |
| ACACTAATGACAAAAACAGG+AGG | + | chr1.4:88454913-88454932 | None:intergenic | 35.0% | |
| ACAGACACTGATATATCACA+TGG | + | chr1.4:88456896-88456915 | None:intergenic | 35.0% | |
| ACTGAGAAGAAGTGAATGAA+AGG | - | chr1.4:88453957-88453976 | MS.gene90109:intron | 35.0% | |
| ACTGCAACTTATGCATCAAA+AGG | + | chr1.4:88456963-88456982 | None:intergenic | 35.0% | |
| ACTTAATGCAGAGATACACT+TGG | + | chr1.4:88455460-88455479 | None:intergenic | 35.0% | |
| AGGATTTACCATATTCATGG+TGG | + | chr1.4:88457106-88457125 | None:intergenic | 35.0% | |
| ATGCTCTCATAAATTGCCTA+TGG | - | chr1.4:88453556-88453575 | MS.gene90109:intron | 35.0% | |
| ATTGTTTGGTATCTCCTTCT+GGG | - | chr1.4:88454878-88454897 | MS.gene90109:intron | 35.0% | |
| CAATTCTAACTCTCAAAGGT+GGG | - | chr1.4:88452362-88452381 | MS.gene90109:CDS | 35.0% | |
| CCTTTATATGTGAAGAGTTG+GGG | - | chr1.4:88455321-88455340 | MS.gene90109:intron | 35.0% | |
| CTAATTAGGCTCACAAAATC+AGG | + | chr1.4:88454499-88454518 | None:intergenic | 35.0% | |
| CTCATAGTTTAACTAGCTGA+AGG | - | chr1.4:88456781-88456800 | MS.gene90109:CDS | 35.0% | |
| CTCGATTATAACTTACGCAA+TGG | - | chr1.4:88455785-88455804 | MS.gene90109:intron | 35.0% | |
| CTGCAACTTATGCATCAAAA+GGG | + | chr1.4:88456962-88456981 | None:intergenic | 35.0% | |
| CTTACATCAAACAAGTATGC+AGG | - | chr1.4:88453066-88453085 | MS.gene90109:intron | 35.0% | |
| GACATCTCTATCATTGCTTT+GGG | - | chr1.4:88457034-88457053 | MS.gene90109:CDS | 35.0% | |
| GCTGTTTATTATACTTAGGG+AGG | + | chr1.4:88456403-88456422 | None:intergenic | 35.0% | |
| GTACCCAATGTTATGAATGA+CGG | - | chr1.4:88453454-88453473 | MS.gene90109:intron | 35.0% | |
| GTTAATATCACACATGCAGT+GGG | - | chr1.4:88452818-88452837 | MS.gene90109:CDS | 35.0% | |
| GTTTCTTCTTCTGATGAACA+AGG | + | chr1.4:88451796-88451815 | None:intergenic | 35.0% | |
| TAACCGTGAAAAAGGATGAA+GGG | + | chr1.4:88453884-88453903 | None:intergenic | 35.0% | |
| TAACTGTAGGACGGAAAATA+TGG | - | chr1.4:88454531-88454550 | MS.gene90109:intron | 35.0% | |
| TACACAGACAAGAATGAATG+AGG | + | chr1.4:88453272-88453291 | None:intergenic | 35.0% | |
| TCAATTCTAACTCTCAAAGG+TGG | - | chr1.4:88452361-88452380 | MS.gene90109:CDS | 35.0% | |
| TCTTCTCTTAACCGTGAAAA+AGG | + | chr1.4:88453892-88453911 | None:intergenic | 35.0% | |
| TGACATCTCTATCATTGCTT+TGG | - | chr1.4:88457033-88457052 | MS.gene90109:CDS | 35.0% | |
| TGATTACAGTAGCTGAAACA+CGG | - | chr1.4:88453295-88453314 | MS.gene90109:intron | 35.0% | |
| TGCTCTCATAAATTGCCTAT+GGG | - | chr1.4:88453557-88453576 | MS.gene90109:intron | 35.0% | |
| TGTAAGTTGTGACACATAGT+AGG | + | chr1.4:88452596-88452615 | None:intergenic | 35.0% | |
| TGTTAATATCACACATGCAG+TGG | - | chr1.4:88452817-88452836 | MS.gene90109:CDS | 35.0% | |
| TGTTCTCAATATGAGGAAAG+TGG | + | chr1.4:88452987-88453006 | None:intergenic | 35.0% | |
| TTAACCGTGAAAAAGGATGA+AGG | + | chr1.4:88453885-88453904 | None:intergenic | 35.0% | |
| TTCTCCTATAAAGAGGAGTA+GGG | + | chr1.4:88456297-88456316 | None:intergenic | 35.0% | |
| TTGCGTAAGTTATAATCGAG+AGG | + | chr1.4:88455785-88455804 | None:intergenic | 35.0% | |
| TTGGTCCTTCAGCTTAAAAT+CGG | - | chr1.4:88453226-88453245 | MS.gene90109:intron | 35.0% | |
| TTGTGACACATAGTAGGAAA+AGG | + | chr1.4:88452590-88452609 | None:intergenic | 35.0% | |
| TTTAAGCCCATTATACTCTC+GGG | + | chr1.4:88454073-88454092 | None:intergenic | 35.0% | |
| TTTCTCCTATAAAGAGGAGT+AGG | + | chr1.4:88456298-88456317 | None:intergenic | 35.0% | |
| ! | AAACAACCCGAGAGTATAAT+GGG | - | chr1.4:88454064-88454083 | MS.gene90109:intron | 35.0% |
| ! | AAAGAAGTACAAGCAGTTGT+TGG | + | chr1.4:88451590-88451609 | None:intergenic | 35.0% |
| ! | AAAGCATCCAAAAACCCAAA+TGG | + | chr1.4:88456088-88456107 | None:intergenic | 35.0% |
| ! | AATGAGGAAATTAGGGCATT+AGG | + | chr1.4:88453256-88453275 | None:intergenic | 35.0% |
| ! | ACTCTCGGGTTGTTTAAATA+TGG | + | chr1.4:88454059-88454078 | None:intergenic | 35.0% |
| ! | AGTTTCACTAGTTTGTGTGT+TGG | + | chr1.4:88454732-88454751 | None:intergenic | 35.0% |
| ! | GATTTTGTAATGTGGCAGTA+AGG | - | chr1.4:88455676-88455695 | MS.gene90109:intron | 35.0% |
| ! | GCTCAATCTTTTCTTCGTTT+TGG | - | chr1.4:88452880-88452899 | MS.gene90109:CDS | 35.0% |
| ! | GTAATGGCTAAGTTCTAGTA+TGG | + | chr1.4:88452711-88452730 | None:intergenic | 35.0% |
| ! | GTGGTATTTGGGGTAAATTT+AGG | + | chr1.4:88456115-88456134 | None:intergenic | 35.0% |
| ! | GTGGTCAAGTTTATGTTTTC+TGG | - | chr1.4:88454766-88454785 | MS.gene90109:intron | 35.0% |
| ! | GTTTCACTAGTTTGTGTGTT+GGG | + | chr1.4:88454731-88454750 | None:intergenic | 35.0% |
| ! | TAAACAACCCGAGAGTATAA+TGG | - | chr1.4:88454063-88454082 | MS.gene90109:intron | 35.0% |
| ! | TCACTACTTTCAAAAAGTGC+TGG | + | chr1.4:88455635-88455654 | None:intergenic | 35.0% |
| ! | TGTTTTTCTTTAGTCGTCCA+AGG | - | chr1.4:88456633-88456652 | MS.gene90109:CDS | 35.0% |
| !! | AATGACGGATTAGCAGTTTA+TGG | - | chr1.4:88453469-88453488 | MS.gene90109:intron | 35.0% |
| !! | ATCTGCTGTCTGAGTTTTAA+AGG | + | chr1.4:88455137-88455156 | None:intergenic | 35.0% |
| !! | CAGGTCTTTGAAATCTGAAA+TGG | + | chr1.4:88452206-88452225 | None:intergenic | 35.0% |
| !! | CTGAAGGCTTTGAATATTAC+TGG | - | chr1.4:88456797-88456816 | MS.gene90109:CDS | 35.0% |
| !! | GTCTTTGAAATCTGAAATGG+AGG | + | chr1.4:88452203-88452222 | None:intergenic | 35.0% |
| !! | TTATGGTCCATTTGGGTTTT+TGG | - | chr1.4:88456078-88456097 | MS.gene90109:intron | 35.0% |
| AAAATCCCTTGCCTAGACAA+TGG | - | chr1.4:88453423-88453442 | MS.gene90109:intron | 40.0% | |
| AAACAGGGAGACTGAGAAAT+TGG | - | chr1.4:88455269-88455288 | MS.gene90109:intron | 40.0% | |
| AAAGGAGATTGTTTATGCGG+CGG | - | chr1.4:88453975-88453994 | MS.gene90109:intron | 40.0% | |
| AACACTAAGAATAACTGGCC+TGG | + | chr1.4:88455500-88455519 | None:intergenic | 40.0% | |
| AAGACTATGAAGGCTCCATA+AGG | - | chr1.4:88455233-88455252 | MS.gene90109:intron | 40.0% | |
| AATAACCACATCCAAGCACA+AGG | + | chr1.4:88454651-88454670 | None:intergenic | 40.0% | |
| ACAATTCAGCCATATAAGCG+TGG | - | chr1.4:88453501-88453520 | MS.gene90109:intron | 40.0% | |
| ACCATGACAGAGATGATTCT+GGG | + | chr1.4:88455386-88455405 | None:intergenic | 40.0% | |
| AGACTATGAAGGCTCCATAA+GGG | - | chr1.4:88455234-88455253 | MS.gene90109:intron | 40.0% | |
| AGATTCCACAAACCAATGTC+AGG | + | chr1.4:88456175-88456194 | None:intergenic | 40.0% | |
| AGCCAAATGACCCTTCTTTA+CGG | + | chr1.4:88455114-88455133 | None:intergenic | 40.0% | |
| AGGCCAGTTATTCTTAGTGT+TGG | - | chr1.4:88455499-88455518 | MS.gene90109:intron | 40.0% | |
| AGGCTAACTATGCATTGGAA+AGG | - | chr1.4:88456245-88456264 | MS.gene90109:intron | 40.0% | |
| ATCTCGAGTAACCAACTTTC+CGG | + | chr1.4:88452538-88452557 | None:intergenic | 40.0% | |
| ATGATCCACAACTCGTTGTA+TGG | - | chr1.4:88452062-88452081 | MS.gene90109:intron | 40.0% | |
| ATGGTAGAGCAATCACTCTT+GGG | - | chr1.4:88452331-88452350 | MS.gene90109:CDS | 40.0% | |
| CAAAGAGGCTAACTATGCAT+TGG | - | chr1.4:88456240-88456259 | MS.gene90109:intron | 40.0% | |
| CAATTCAGCCATATAAGCGT+GGG | - | chr1.4:88453502-88453521 | MS.gene90109:intron | 40.0% | |
| CATGCACAAAATTAGGTCTG+GGG | - | chr1.4:88454001-88454020 | MS.gene90109:intron | 40.0% | |
| CCAAAACACGAACAATTTCC+AGG | + | chr1.4:88452945-88452964 | None:intergenic | 40.0% | |
| CCATGCACAAAATTAGGTCT+GGG | - | chr1.4:88454000-88454019 | MS.gene90109:intron | 40.0% | |
| CCCCAACTCTTCACATATAA+AGG | + | chr1.4:88455324-88455343 | None:intergenic | 40.0% | |
| CGGACATCAATTTGGTATGT+GGG | - | chr1.4:88452293-88452312 | MS.gene90109:CDS | 40.0% | |
| GAGAAGAAAAGGGGAAAATC+AGG | + | chr1.4:88452225-88452244 | None:intergenic | 40.0% | |
| GATTACAGTAGCTGAAACAC+GGG | - | chr1.4:88453296-88453315 | MS.gene90109:intron | 40.0% | |
| GATTAGCAGTTTATGGCAGA+GGG | - | chr1.4:88453476-88453495 | MS.gene90109:intron | 40.0% | |
| GCAATTGATGCTGCAGAAAT+CGG | - | chr1.4:88457159-88457178 | MS.gene90109:CDS | 40.0% | |
| GCACCTTCTATTTCAGTGTT+TGG | - | chr1.4:88454982-88455001 | MS.gene90109:intron | 40.0% | |
| GCTCTCATAAATTGCCTATG+GGG | - | chr1.4:88453558-88453577 | MS.gene90109:intron | 40.0% | |
| GGAAAAGTAACTGAATGTCG+TGG | + | chr1.4:88455208-88455227 | None:intergenic | 40.0% | |
| GGCACTAACAATTCATCATC+TGG | + | chr1.4:88456521-88456540 | None:intergenic | 40.0% | |
| GTATTCTATATCAGCATGGG+CGG | - | chr1.4:88455946-88455965 | MS.gene90109:CDS | 40.0% | |
| TACTAGTACTGCCATTGTCT+AGG | + | chr1.4:88453437-88453456 | None:intergenic | 40.0% | |
| TAGTCAAGATTTATGTGGGC+TGG | - | chr1.4:88454033-88454052 | MS.gene90109:intron | 40.0% | |
| TATGGAGCCTTCATAGTCTT+AGG | + | chr1.4:88455233-88455252 | None:intergenic | 40.0% | |
| TCCAGTCAATTAAGTTAGCC+AGG | - | chr1.4:88455479-88455498 | MS.gene90109:intron | 40.0% | |
| TCCATGCACAAAATTAGGTC+TGG | - | chr1.4:88453999-88454018 | MS.gene90109:intron | 40.0% | |
| TCTCCTATAAAGAGGAGTAG+GGG | + | chr1.4:88456296-88456315 | None:intergenic | 40.0% | |
| TGAAGAAGATCATTCTGTCG+TGG | - | chr1.4:88453041-88453060 | MS.gene90109:intron | 40.0% | |
| TGAGAGCTTATCTTTCAGCA+CGG | - | chr1.4:88453017-88453036 | MS.gene90109:intron | 40.0% | |
| TGAGAGTGAGTGACAATGTT+TGG | + | chr1.4:88453155-88453174 | None:intergenic | 40.0% | |
| TGAGTTACAGAGTCAAGCAA+CGG | + | chr1.4:88451755-88451774 | None:intergenic | 40.0% | |
| TGATGCACCAGAGAAGAAAA+GGG | + | chr1.4:88452235-88452254 | None:intergenic | 40.0% | |
| TTATATGTGAAGAGTTGGGG+TGG | - | chr1.4:88455324-88455343 | MS.gene90109:intron | 40.0% | |
| TTCCAAGTAGTGACATGGAT+TGG | - | chr1.4:88456823-88456842 | MS.gene90109:CDS | 40.0% | |
| TTCCATTTATACCCTCGTAG+TGG | - | chr1.4:88451674-88451693 | MS.gene90109:CDS | 40.0% | |
| TTGCCTTATGCTCAATGCTA+TGG | - | chr1.4:88452270-88452289 | MS.gene90109:intron | 40.0% | |
| TTTCCTGCCTAAGACTATGA+AGG | - | chr1.4:88455223-88455242 | MS.gene90109:intron | 40.0% | |
| TTTGCAAACCAACCTGACAT+TGG | - | chr1.4:88456160-88456179 | MS.gene90109:intron | 40.0% | |
| ! | AAATAGCAATCGTGACGGAA+TGG | + | chr1.4:88453605-88453624 | None:intergenic | 40.0% |
| ! | ATTTCTCAGTCTCCCTGTTT+TGG | + | chr1.4:88455269-88455288 | None:intergenic | 40.0% |
| ! | CATTTTGTGTCAATCCCCAT+AGG | + | chr1.4:88453575-88453594 | None:intergenic | 40.0% |
| ! | CCTGGAAATTGTTCGTGTTT+TGG | - | chr1.4:88452942-88452961 | MS.gene90109:intron | 40.0% |
| ! | GATAGAGATGTCAAAAGCAC+AGG | + | chr1.4:88457026-88457045 | None:intergenic | 40.0% |
| ! | GATTTTCCCCTTTTCTTCTC+TGG | - | chr1.4:88452225-88452244 | MS.gene90109:intron | 40.0% |
| ! | GGTAGTTCTGTTGTCAATAG+CGG | - | chr1.4:88453634-88453653 | MS.gene90109:intron | 40.0% |
| ! | TCTGAAACAGACCAACCATA+AGG | + | chr1.4:88456327-88456346 | None:intergenic | 40.0% |
| ! | TGGCTAAGTTCTAGTATGGA+TGG | + | chr1.4:88452707-88452726 | None:intergenic | 40.0% |
| ! | TTTCTCAGTCTCCCTGTTTT+GGG | + | chr1.4:88455268-88455287 | None:intergenic | 40.0% |
| ! | TTTTTGCAGCTCTCTACAAG+TGG | - | chr1.4:88457057-88457076 | MS.gene90109:CDS | 40.0% |
| !! | AATGATGGATTCAGCAGAGA+AGG | - | chr1.4:88451718-88451737 | MS.gene90109:CDS | 40.0% |
| !! | AGTGACATGGATTGGTCATT+TGG | - | chr1.4:88456831-88456850 | MS.gene90109:CDS | 40.0% |
| !! | ATGATGGATTCAGCAGAGAA+GGG | - | chr1.4:88451719-88451738 | MS.gene90109:CDS | 40.0% |
| !! | CGATTGCTATTTAACAACGC+TGG | - | chr1.4:88453613-88453632 | MS.gene90109:intron | 40.0% |
| !! | GTACCCTTCATCCTTTTTCA+CGG | - | chr1.4:88453878-88453897 | MS.gene90109:intron | 40.0% |
| !! | GTGATTTTGGAGAAGTTCGT+AGG | - | chr1.4:88457181-88457200 | MS.gene90109:CDS | 40.0% |
| !! | TGGTTGGTCTGTTTCAGATA+TGG | - | chr1.4:88456329-88456348 | MS.gene90109:intron | 40.0% |
| AACAGTACCTTCTACCTGGA+AGG | + | chr1.4:88456141-88456160 | None:intergenic | 45.0% | |
| AATTGTACGATCGGAACAGC+TGG | - | chr1.4:88453831-88453850 | MS.gene90109:intron | 45.0% | |
| ACCAAACCAACCCTATTGCT+TGG | + | chr1.4:88455547-88455566 | None:intergenic | 45.0% | |
| ACCCAGAATCATCTCTGTCA+TGG | - | chr1.4:88455382-88455401 | MS.gene90109:intron | 45.0% | |
| AGAGGGTAAGTCTCTCACAA+AGG | + | chr1.4:88451852-88451871 | None:intergenic | 45.0% | |
| AGGCTATACAGCTTCCAACT+TGG | - | chr1.4:88454935-88454954 | MS.gene90109:intron | 45.0% | |
| AGTGAAGCAATGCATCACCT+TGG | - | chr1.4:88452477-88452496 | MS.gene90109:CDS | 45.0% | |
| ATAACAGCCATACCTGCACA+CGG | + | chr1.4:88454848-88454867 | None:intergenic | 45.0% | |
| ATACTCACGTGCCGTAAAGA+AGG | - | chr1.4:88455100-88455119 | MS.gene90109:intron | 45.0% | |
| ATCTGCACTACCATGCAACA+AGG | + | chr1.4:88455359-88455378 | None:intergenic | 45.0% | |
| ATTCCTGGCTGCTCATCAAA+AGG | + | chr1.4:88457228-88457247 | None:intergenic | 45.0% | |
| ATTGCACCCTGTTCTTCCTT+TGG | + | chr1.4:88452847-88452866 | None:intergenic | 45.0% | |
| CAAGTCAAGTAAGTCGGCAA+CGG | + | chr1.4:88452095-88452114 | None:intergenic | 45.0% | |
| CATCAATTTGGTATGTGGGC+TGG | - | chr1.4:88452297-88452316 | MS.gene90109:CDS | 45.0% | |
| CATCGTTGGATGCAGAATGA+TGG | - | chr1.4:88451703-88451722 | MS.gene90109:CDS | 45.0% | |
| CCTTATGCTCAATGCTATGG+CGG | - | chr1.4:88452273-88452292 | MS.gene90109:intron | 45.0% | |
| CTATAAAGAGGAGTAGGGGA+AGG | + | chr1.4:88456292-88456311 | None:intergenic | 45.0% | |
| CTGCTTCCATGATTGCTAGA+TGG | - | chr1.4:88455987-88456006 | MS.gene90109:CDS | 45.0% | |
| CTGGAAGGTCTGTGGTATTT+GGG | + | chr1.4:88456126-88456145 | None:intergenic | 45.0% | |
| CTTCCCCTACTCCTCTTTAT+AGG | - | chr1.4:88456290-88456309 | MS.gene90109:intron | 45.0% | |
| CTTGGTCAAGTAGGCCTATA+TGG | - | chr1.4:88455581-88455600 | MS.gene90109:intron | 45.0% | |
| GAATCATCTCTGTCATGGTC+AGG | - | chr1.4:88455387-88455406 | MS.gene90109:intron | 45.0% | |
| GACCAATCCATGTCACTACT+TGG | + | chr1.4:88456828-88456847 | None:intergenic | 45.0% | |
| GACCATGACAGAGATGATTC+TGG | + | chr1.4:88455387-88455406 | None:intergenic | 45.0% | |
| GAGAGCTTATCTTTCAGCAC+GGG | - | chr1.4:88453018-88453037 | MS.gene90109:intron | 45.0% | |
| GAGGAAGACCACCATGAATA+TGG | - | chr1.4:88457095-88457114 | MS.gene90109:CDS | 45.0% | |
| GAGTGAGTGACAATGTTTGG+TGG | + | chr1.4:88453152-88453171 | None:intergenic | 45.0% | |
| GATACAACGACAACAGACGA+GGG | + | chr1.4:88451613-88451632 | None:intergenic | 45.0% | |
| GATGCACCAGAGAAGAAAAG+GGG | + | chr1.4:88452234-88452253 | None:intergenic | 45.0% | |
| GATGCATTGCTTCACTGCAA+AGG | + | chr1.4:88452473-88452492 | None:intergenic | 45.0% | |
| GATGGTAGAGCAATCACTCT+TGG | - | chr1.4:88452330-88452349 | MS.gene90109:CDS | 45.0% | |
| GCAAAACAGTACCTTCTACC+TGG | + | chr1.4:88456145-88456164 | None:intergenic | 45.0% | |
| GCCTGGCTAACTTAATTGAC+TGG | + | chr1.4:88455483-88455502 | None:intergenic | 45.0% | |
| GCGGACATCAATTTGGTATG+TGG | - | chr1.4:88452292-88452311 | MS.gene90109:CDS | 45.0% | |
| GGATCATCTACTGCAACTGA+TGG | + | chr1.4:88452049-88452068 | None:intergenic | 45.0% | |
| GGCTATACAGCTTCCAACTT+GGG | - | chr1.4:88454936-88454955 | MS.gene90109:intron | 45.0% | |
| GGGAATCCAAAGGAAGAACA+GGG | - | chr1.4:88452838-88452857 | MS.gene90109:CDS | 45.0% | |
| GGTCTTTCCAAGTAGTGACA+TGG | - | chr1.4:88456818-88456837 | MS.gene90109:CDS | 45.0% | |
| GTGAAGCAATGCATCACCTT+GGG | - | chr1.4:88452478-88452497 | MS.gene90109:CDS | 45.0% | |
| GTGATGCACCAGAGAAGAAA+AGG | + | chr1.4:88452236-88452255 | None:intergenic | 45.0% | |
| GTGGCATTTCTGATGATCAG+AGG | - | chr1.4:88457076-88457095 | MS.gene90109:CDS | 45.0% | |
| GTTGCAATCCCACGCTTATA+TGG | + | chr1.4:88453513-88453532 | None:intergenic | 45.0% | |
| TACTCACGTGCCGTAAAGAA+GGG | - | chr1.4:88455101-88455120 | MS.gene90109:intron | 45.0% | |
| TACTGCCATTGTCTAGGCAA+GGG | + | chr1.4:88453431-88453450 | None:intergenic | 45.0% | |
| TATCTCCTTCTGGGTCTTCA+CGG | - | chr1.4:88454887-88454906 | MS.gene90109:intron | 45.0% | |
| TATTCCCAGTCAACCCAAGT+TGG | + | chr1.4:88454952-88454971 | None:intergenic | 45.0% | |
| TCAGACCATACAACGAGTTG+TGG | + | chr1.4:88452070-88452089 | None:intergenic | 45.0% | |
| TCCACAAACCAATGTCAGGT+TGG | + | chr1.4:88456171-88456190 | None:intergenic | 45.0% | |
| TCCATGATTGCTAGATGGCA+GGG | - | chr1.4:88455992-88456011 | MS.gene90109:CDS | 45.0% | |
| TCTGCACTACCATGCAACAA+GGG | + | chr1.4:88455358-88455377 | None:intergenic | 45.0% | |
| TGAATGACTCTCACCTCTCT+TGG | + | chr1.4:88451896-88451915 | None:intergenic | 45.0% | |
| TGCCGTAAAGAAGGGTCATT+TGG | - | chr1.4:88455109-88455128 | MS.gene90109:intron | 45.0% | |
| TGGAAGGTCTGTGGTATTTG+GGG | + | chr1.4:88456125-88456144 | None:intergenic | 45.0% | |
| TGGGAATCCAAAGGAAGAAC+AGG | - | chr1.4:88452837-88452856 | MS.gene90109:CDS | 45.0% | |
| TGGTAGAGCAATCACTCTTG+GGG | - | chr1.4:88452332-88452351 | MS.gene90109:CDS | 45.0% | |
| TGGTGACAAGAGAAAGAGCA+CGG | + | chr1.4:88452515-88452534 | None:intergenic | 45.0% | |
| TGTATAAACCTACCGTGTGC+AGG | - | chr1.4:88454833-88454852 | MS.gene90109:intron | 45.0% | |
| TTCCATGATTGCTAGATGGC+AGG | - | chr1.4:88455991-88456010 | MS.gene90109:CDS | 45.0% | |
| TTTGGAGAAAGTGGGTGAAG+CGG | - | chr1.4:88453730-88453749 | MS.gene90109:intron | 45.0% | |
| ! | CAAGAAAGCATGCATACACC+TGG | + | chr1.4:88457291-88457310 | None:intergenic | 45.0% |
| ! | CCCAGACCTAATTTTGTGCA+TGG | + | chr1.4:88454003-88454022 | None:intergenic | 45.0% |
| ! | CGAGCATACTTTTCCATTCC+TGG | + | chr1.4:88457243-88457262 | None:intergenic | 45.0% |
| ! | GCTGCAGAAATCGGTGATTT+TGG | - | chr1.4:88457168-88457187 | MS.gene90109:CDS | 45.0% |
| ! | GGATTAGCAGTTTATGGCAG+AGG | - | chr1.4:88453475-88453494 | MS.gene90109:intron | 45.0% |
| ! | GTAAAGAAGCGTGGACAAGT+TGG | - | chr1.4:88456576-88456595 | MS.gene90109:CDS | 45.0% |
| ! | TGCCACTACGAGGGTATAAA+TGG | + | chr1.4:88451679-88451698 | None:intergenic | 45.0% |
| ! | TTTGGGCGTTGTTTCCCTTA+TGG | + | chr1.4:88455251-88455270 | None:intergenic | 45.0% |
| ! | TTTTGATGAGCAGCCAGGAA+TGG | - | chr1.4:88457227-88457246 | MS.gene90109:CDS | 45.0% |
| !! | AAGCAATAGGGTTGGTTTGG+TGG | - | chr1.4:88455546-88455565 | MS.gene90109:intron | 45.0% |
| !! | ACCAACCTGACATTGGTTTG+TGG | - | chr1.4:88456167-88456186 | MS.gene90109:intron | 45.0% |
| !! | AGCTACAGCTTAAAGGTGCT+GGG | - | chr1.4:88452385-88452404 | MS.gene90109:CDS | 45.0% |
| !! | GCTGACCGATTTTAAGCTGA+AGG | + | chr1.4:88453234-88453253 | None:intergenic | 45.0% |
| !! | TCCAAGCAATAGGGTTGGTT+TGG | - | chr1.4:88455543-88455562 | MS.gene90109:intron | 45.0% |
| !! | TGCTATGGCGGACATCAATT+TGG | - | chr1.4:88452285-88452304 | MS.gene90109:CDS | 45.0% |
| !!! | GCGTCGCGTTTTGTCATTTT+TGG | + | chr1.4:88453691-88453710 | None:intergenic | 45.0% |
| !! | ATAATGATTATAAAAAATAA+TGG | - | chr1.4:88454239-88454258 | MS.gene90109:intron | 5.0% |
| AAACCTACCGTGTGCAGGTA+TGG | - | chr1.4:88454838-88454857 | MS.gene90109:intron | 50.0% | |
| ACCAGCGTCTGTTGTCAATG+CGG | + | chr1.4:88454472-88454491 | None:intergenic | 50.0% | |
| ACGTAGCACTGCAAGACCAT+CGG | + | chr1.4:88452433-88452452 | None:intergenic | 50.0% | |
| ACTCTCACCTCTCTTGGAAG+GGG | + | chr1.4:88451890-88451909 | None:intergenic | 50.0% | |
| AGCTGGATCTGAGTTTACGC+GGG | - | chr1.4:88453848-88453867 | MS.gene90109:intron | 50.0% | |
| AGGGAAACAACGCCCAAAAC+AGG | - | chr1.4:88455253-88455272 | MS.gene90109:intron | 50.0% | |
| AGGTGGGAGCTACAGCTTAA+AGG | - | chr1.4:88452378-88452397 | MS.gene90109:CDS | 50.0% | |
| AGTGCTACGTAGCAGCATCA+GGG | - | chr1.4:88452443-88452462 | MS.gene90109:CDS | 50.0% | |
| ATCCAAGCACAAGGTGTGCA+AGG | + | chr1.4:88454642-88454661 | None:intergenic | 50.0% | |
| CACATGCAGTGGGAATCCAA+AGG | - | chr1.4:88452828-88452847 | MS.gene90109:CDS | 50.0% | |
| CAGAGGTAGTAATGAGGACC+TGG | - | chr1.4:88452924-88452943 | MS.gene90109:intron | 50.0% | |
| CAGCTGGATCTGAGTTTACG+CGG | - | chr1.4:88453847-88453866 | MS.gene90109:intron | 50.0% | |
| CAGGTCCTCATTACTACCTC+TGG | + | chr1.4:88452926-88452945 | None:intergenic | 50.0% | |
| CATGATTGCTAGATGGCAGG+GGG | - | chr1.4:88455994-88456013 | MS.gene90109:CDS | 50.0% | |
| CCAAATACCACAGACCTTCC+AGG | - | chr1.4:88456124-88456143 | MS.gene90109:intron | 50.0% | |
| CCATGATTGCTAGATGGCAG+GGG | - | chr1.4:88455993-88456012 | MS.gene90109:CDS | 50.0% | |
| CCTGGAAGGTCTGTGGTATT+TGG | + | chr1.4:88456127-88456146 | None:intergenic | 50.0% | |
| CTGCACTACCATGCAACAAG+GGG | + | chr1.4:88455357-88455376 | None:intergenic | 50.0% | |
| CTGCAGCATCAATTGCAGTC+TGG | + | chr1.4:88457155-88457174 | None:intergenic | 50.0% | |
| GACTCTCACCTCTCTTGGAA+GGG | + | chr1.4:88451891-88451910 | None:intergenic | 50.0% | |
| GCATTGTTCCCCTTGTTGCA+TGG | - | chr1.4:88455346-88455365 | MS.gene90109:intron | 50.0% | |
| GCGGCTCCATGCACAAAATT+AGG | - | chr1.4:88453994-88454013 | MS.gene90109:intron | 50.0% | |
| GCTCTTTCTCTTGTCACCAC+CGG | - | chr1.4:88452516-88452535 | MS.gene90109:CDS | 50.0% | |
| GGATACAACGACAACAGACG+AGG | + | chr1.4:88451614-88451633 | None:intergenic | 50.0% | |
| GGGAAACAACGCCCAAAACA+GGG | - | chr1.4:88455254-88455273 | MS.gene90109:intron | 50.0% | |
| GTACTGCCATTGTCTAGGCA+AGG | + | chr1.4:88453432-88453451 | None:intergenic | 50.0% | |
| GTCCTCATTACTACCTCTGG+AGG | + | chr1.4:88452923-88452942 | None:intergenic | 50.0% | |
| TAAGGCAACGCTCCAAGCAA+AGG | + | chr1.4:88452258-88452277 | None:intergenic | 50.0% | |
| TACCAACTACATGCCTCCAG+AGG | - | chr1.4:88452907-88452926 | MS.gene90109:CDS | 50.0% | |
| TCGAGTAACCAACTTTCCGG+TGG | + | chr1.4:88452535-88452554 | None:intergenic | 50.0% | |
| TCTGGTGCATCACCTTTGCT+TGG | - | chr1.4:88452243-88452262 | MS.gene90109:intron | 50.0% | |
| TCTTGTCACCACCGGAAAGT+TGG | - | chr1.4:88452524-88452543 | MS.gene90109:CDS | 50.0% | |
| TGACTCTCACCTCTCTTGGA+AGG | + | chr1.4:88451892-88451911 | None:intergenic | 50.0% | |
| TGCCTCCAGAGGTAGTAATG+AGG | - | chr1.4:88452918-88452937 | MS.gene90109:CDS | 50.0% | |
| TGGATACGGGTAACCTGGAT+GGG | - | chr1.4:88455519-88455538 | MS.gene90109:intron | 50.0% | |
| TGGATGGGGTCCAAGCAATA+GGG | - | chr1.4:88455534-88455553 | MS.gene90109:intron | 50.0% | |
| TGGCCAAATTCGGGTCAAAG+CGG | - | chr1.4:88453774-88453793 | MS.gene90109:intron | 50.0% | |
| TTATACCCTCGTAGTGGCAG+TGG | - | chr1.4:88451680-88451699 | MS.gene90109:CDS | 50.0% | |
| TTCCTTGCACACCTTGTGCT+TGG | - | chr1.4:88454637-88454656 | MS.gene90109:intron | 50.0% | |
| TTGCTCTACCATCACCCAAC+TGG | + | chr1.4:88452323-88452342 | None:intergenic | 50.0% | |
| TTGGATACGGGTAACCTGGA+TGG | - | chr1.4:88455518-88455537 | MS.gene90109:intron | 50.0% | |
| TTGTCAATAGCGGCTGCTAC+CGG | - | chr1.4:88453644-88453663 | MS.gene90109:intron | 50.0% | |
| ! | AGAGAAAGAGCACGGGTTGT+TGG | + | chr1.4:88452507-88452526 | None:intergenic | 50.0% |
| ! | AGTGTTGGATACGGGTAACC+TGG | - | chr1.4:88455514-88455533 | MS.gene90109:intron | 50.0% |
| ! | CATCCTTTTGATGAGCAGCC+AGG | - | chr1.4:88457222-88457241 | MS.gene90109:CDS | 50.0% |
| ! | CCGCCATAGCATTGAGCATA+AGG | + | chr1.4:88452276-88452295 | None:intergenic | 50.0% |
| ! | CTTAGGGAGGCCAAGCTTTT+TGG | + | chr1.4:88456390-88456409 | None:intergenic | 50.0% |
| ! | GAGCCTTCATAGTCTTAGGC+AGG | + | chr1.4:88455229-88455248 | None:intergenic | 50.0% |
| ! | GAGCTACAGCTTAAAGGTGC+TGG | - | chr1.4:88452384-88452403 | MS.gene90109:CDS | 50.0% |
| ! | GATGTTGGGCTTGGTCAAGT+AGG | - | chr1.4:88455572-88455591 | MS.gene90109:intron | 50.0% |
| ! | GGATCGGTTCTTGGATCAGA+GGG | + | chr1.4:88451869-88451888 | None:intergenic | 50.0% |
| ! | GGTGACAAGAGAAAGAGCAC+GGG | + | chr1.4:88452514-88452533 | None:intergenic | 50.0% |
| ! | GTCAAAAGCACAGGCCATCT+TGG | + | chr1.4:88457017-88457036 | None:intergenic | 50.0% |
| ! | GTCAAGAGCGTAAAGAAGCG+TGG | - | chr1.4:88456567-88456586 | MS.gene90109:CDS | 50.0% |
| ! | TACCTCTGGAGGCATGTAGT+TGG | + | chr1.4:88452912-88452931 | None:intergenic | 50.0% |
| !! | AATAGGGTTGGTTTGGTGGC+AGG | - | chr1.4:88455550-88455569 | MS.gene90109:intron | 50.0% |
| !! | AGCTTCCAACTTGGGTTGAC+TGG | - | chr1.4:88454944-88454963 | MS.gene90109:intron | 50.0% |
| !! | CGTTGCCGACTTACTTGACT+TGG | - | chr1.4:88452093-88452112 | MS.gene90109:intron | 50.0% |
| !! | GAGAGCATCACCTGCCATTA+CGG | + | chr1.4:88453544-88453563 | None:intergenic | 50.0% |
| !! | GCTTCCAACTTGGGTTGACT+GGG | - | chr1.4:88454945-88454964 | MS.gene90109:intron | 50.0% |
| !! | TGGTTTGGTGGCAGGATGTT+GGG | - | chr1.4:88455558-88455577 | MS.gene90109:intron | 50.0% |
| !! | TTGGTTTGGTGGCAGGATGT+TGG | - | chr1.4:88455557-88455576 | MS.gene90109:intron | 50.0% |
| AACCGATCCCCTTCCAAGAG+AGG | - | chr1.4:88451880-88451899 | MS.gene90109:intron | 55.0% | |
| AAGCGTGGGATTGCAACCTG+TGG | - | chr1.4:88453516-88453535 | MS.gene90109:intron | 55.0% | |
| AGCGCGGCCAACCCAAAAAT+TGG | + | chr1.4:88454443-88454462 | None:intergenic | 55.0% | |
| ATTGCTAGATGGCAGGGGGT+TGG | - | chr1.4:88455998-88456017 | MS.gene90109:CDS | 55.0% | |
| CACCCTGCTCCACCGAATAT+CGG | + | chr1.4:88453756-88453775 | None:intergenic | 55.0% | |
| CACCTCTCTTGGAAGGGGAT+CGG | + | chr1.4:88451885-88451904 | None:intergenic | 55.0% | |
| CAGTGCTACGTAGCAGCATC+AGG | - | chr1.4:88452442-88452461 | MS.gene90109:CDS | 55.0% | |
| CCACAGACCTTCCAGGTAGA+AGG | - | chr1.4:88456131-88456150 | MS.gene90109:intron | 55.0% | |
| CCATCGGCAAAGCGACTGTA+AGG | + | chr1.4:88452417-88452436 | None:intergenic | 55.0% | |
| CCCCTGCCATCTAGCAATCA+TGG | + | chr1.4:88455996-88456015 | None:intergenic | 55.0% | |
| CCTTCTACCTGGAAGGTCTG+TGG | + | chr1.4:88456134-88456153 | None:intergenic | 55.0% | |
| CTATTGCTTGGACCCCATCC+AGG | + | chr1.4:88455535-88455554 | None:intergenic | 55.0% | |
| CTGGATGGGGTCCAAGCAAT+AGG | - | chr1.4:88455533-88455552 | MS.gene90109:intron | 55.0% | |
| CTGGTCGATATGCCCATGCT+GGG | + | chr1.4:88457272-88457291 | None:intergenic | 55.0% | |
| GCACACCTTGTGCTTGGATG+TGG | - | chr1.4:88454643-88454662 | MS.gene90109:intron | 55.0% | |
| GGATACGGGTAACCTGGATG+GGG | - | chr1.4:88455520-88455539 | MS.gene90109:intron | 55.0% | |
| GGCCAACCCAAAAATTGGCG+CGG | + | chr1.4:88454438-88454457 | None:intergenic | 55.0% | |
| GTCAATGCGGAAATGCAGCG+CGG | + | chr1.4:88454459-88454478 | None:intergenic | 55.0% | |
| TGCAACCTGTGGCACCGTAA+TGG | - | chr1.4:88453527-88453546 | MS.gene90109:intron | 55.0% | |
| TGGAGCAGGGTGGCCAAATT+CGG | - | chr1.4:88453764-88453783 | MS.gene90109:intron | 55.0% | |
| TGGGGTCCAAGCAATAGGGT+TGG | - | chr1.4:88455538-88455557 | MS.gene90109:intron | 55.0% | |
| TGGGTGAAGCGGCCGATATT+CGG | - | chr1.4:88453741-88453760 | MS.gene90109:intron | 55.0% | |
| TGGTCGATATGCCCATGCTG+GGG | + | chr1.4:88457271-88457290 | None:intergenic | 55.0% | |
| ! | CACGGGTTGTTGGAATCCCA+AGG | + | chr1.4:88452497-88452516 | None:intergenic | 55.0% |
| ! | CCTTACAGTCGCTTTGCCGA+TGG | - | chr1.4:88452414-88452433 | MS.gene90109:CDS | 55.0% |
| ! | CTTGGAAGGGGATCGGTTCT+TGG | + | chr1.4:88451878-88451897 | None:intergenic | 55.0% |
| ! | GCGGAGCGTTTGGAGAAAGT+GGG | - | chr1.4:88453722-88453741 | MS.gene90109:intron | 55.0% |
| ! | GGGATCGGTTCTTGGATCAG+AGG | + | chr1.4:88451870-88451889 | None:intergenic | 55.0% |
| ! | TCCGCATTGACAACAGACGC+TGG | - | chr1.4:88454468-88454487 | MS.gene90109:intron | 55.0% |
| !! | CAGGGGGTTGGTTTCACTCA+TGG | - | chr1.4:88456010-88456029 | MS.gene90109:CDS | 55.0% |
| AAACGCGACGCAGCGCTACA+AGG | - | chr1.4:88453700-88453719 | MS.gene90109:intron | 60.0% | |
| ACCCAAAAATTGGCGCGGCG+CGG | + | chr1.4:88454433-88454452 | None:intergenic | 60.0% | |
| ACCTGTGGCACCGTAATGGC+AGG | - | chr1.4:88453531-88453550 | MS.gene90109:intron | 60.0% | |
| ACGATGCCACTGCCACTACG+AGG | + | chr1.4:88451689-88451708 | None:intergenic | 60.0% | |
| ATGCTCGCTTACCCCCAGCA+TGG | - | chr1.4:88457256-88457275 | MS.gene90109:CDS | 60.0% | |
| CAGCCATACCTGCACACGGT+AGG | + | chr1.4:88454844-88454863 | None:intergenic | 60.0% | |
| CCAAACTCACTCCTCCGACG+CGG | - | chr1.4:88451632-88451651 | MS.gene90109:CDS | 60.0% | |
| CCAGCATGGGCATATCGACC+AGG | - | chr1.4:88457270-88457289 | MS.gene90109:CDS | 60.0% | |
| CCTGGTCGATATGCCCATGC+TGG | + | chr1.4:88457273-88457292 | None:intergenic | 60.0% | |
| CGATGCCACTGCCACTACGA+GGG | + | chr1.4:88451688-88451707 | None:intergenic | 60.0% | |
| CGTAGTGGCAGTGGCATCGT+TGG | - | chr1.4:88451689-88451708 | MS.gene90109:CDS | 60.0% | |
| GGAGCAGGGTGGCCAAATTC+GGG | - | chr1.4:88453765-88453784 | MS.gene90109:intron | 60.0% | |
| GGTCGATATGCCCATGCTGG+GGG | + | chr1.4:88457270-88457289 | None:intergenic | 60.0% | |
| GTGAAGCGGCCGATATTCGG+TGG | - | chr1.4:88453744-88453763 | MS.gene90109:intron | 60.0% | |
| TGCTCGCTTACCCCCAGCAT+GGG | - | chr1.4:88457257-88457276 | MS.gene90109:CDS | 60.0% | |
| TGGTGGCAGGATGTTGGGCT+TGG | - | chr1.4:88455563-88455582 | MS.gene90109:intron | 60.0% | |
| ! | CGATATTCGGTGGAGCAGGG+TGG | - | chr1.4:88453754-88453773 | MS.gene90109:intron | 60.0% |
| ! | CGGCCGCTTTGACCCGAATT+TGG | + | chr1.4:88453780-88453799 | None:intergenic | 60.0% |
| ! | GGCCGATATTCGGTGGAGCA+GGG | - | chr1.4:88453751-88453770 | MS.gene90109:intron | 60.0% |
| ! | GGCGGAGCGTTTGGAGAAAG+TGG | - | chr1.4:88453721-88453740 | MS.gene90109:intron | 60.0% |
| !! | ACCTGCCATTACGGTGCCAC+AGG | + | chr1.4:88453535-88453554 | None:intergenic | 60.0% |
| !! | GGTATGTGGGCTGGCCAGTT+GGG | - | chr1.4:88452306-88452325 | MS.gene90109:CDS | 60.0% |
| !! | TGGTATGTGGGCTGGCCAGT+TGG | - | chr1.4:88452305-88452324 | MS.gene90109:CDS | 60.0% |
| !!! | CGCCGCGCCAATTTTTGGGT+TGG | - | chr1.4:88454433-88454452 | MS.gene90109:intron | 60.0% |
| !!! | CGTAGCGGGCGCTATTTTGG+CGG | + | chr1.4:88454401-88454420 | None:intergenic | 60.0% |
| !!! | GTGCGTAGCGGGCGCTATTT+TGG | + | chr1.4:88454404-88454423 | None:intergenic | 60.0% |
| AACTCACTCCTCCGACGCGG+CGG | - | chr1.4:88451635-88451654 | MS.gene90109:CDS | 65.0% | |
| CCCAAAAATTGGCGCGGCGC+GGG | + | chr1.4:88454432-88454451 | None:intergenic | 65.0% | |
| CCGCGTCGGAGGAGTGAGTT+TGG | + | chr1.4:88451635-88451654 | None:intergenic | 65.0% | |
| GGAGGCCGTGAAGACCCAGA+AGG | + | chr1.4:88454895-88454914 | None:intergenic | 65.0% | |
| ! | CCCGCGCCGCGCCAATTTTT+GGG | - | chr1.4:88454429-88454448 | MS.gene90109:intron | 65.0% |
| ! | CGGCCGATATTCGGTGGAGC+AGG | - | chr1.4:88453750-88453769 | MS.gene90109:intron | 65.0% |
| ! | GCGCTACAAGGCGGAGCGTT+TGG | - | chr1.4:88453712-88453731 | MS.gene90109:intron | 65.0% |
| ! | TCCCGCGCCGCGCCAATTTT+TGG | - | chr1.4:88454428-88454447 | MS.gene90109:intron | 65.0% |
| !! | TGGGCTGGCCAGTTGGGTGA+TGG | - | chr1.4:88452312-88452331 | MS.gene90109:CDS | 65.0% |
| !!! | CGGGCGCTATTTTGGCGGTG+CGG | + | chr1.4:88454396-88454415 | None:intergenic | 65.0% |
| AAATTGGCGCGGCGCGGGAG+CGG | + | chr1.4:88454427-88454446 | None:intergenic | 70.0% | |
| ACTCCGCGCCACGATAGCGC+CGG | + | chr1.4:88453666-88453685 | None:intergenic | 70.0% | |
| CGCGACGCAGCGCTACAAGG+CGG | - | chr1.4:88453703-88453722 | MS.gene90109:intron | 70.0% | |
| CTACCGGCGCTATCGTGGCG+CGG | - | chr1.4:88453660-88453679 | MS.gene90109:intron | 70.0% | |
| GGCTGCTACCGGCGCTATCG+TGG | - | chr1.4:88453655-88453674 | MS.gene90109:intron | 70.0% | |
| TTATGCCACCGCCGCCGCGT+CGG | + | chr1.4:88451649-88451668 | None:intergenic | 70.0% | |
| AATTGGCGCGGCGCGGGAGC+GGG | + | chr1.4:88454426-88454445 | None:intergenic | 75.0% | |
| GACGCGGCGGCGGTGGCATA+AGG | - | chr1.4:88451648-88451667 | MS.gene90109:CDS | 75.0% | |
| GGCGCTATCGTGGCGCGGAG+TGG | - | chr1.4:88453665-88453684 | MS.gene90109:intron | 75.0% | |
| TCACTCCTCCGACGCGGCGG+CGG | - | chr1.4:88451638-88451657 | MS.gene90109:CDS | 75.0% | |
| ! | CGCGGGAGCGGGTGCGTAGC+GGG | + | chr1.4:88454415-88454434 | None:intergenic | 80.0% |
| ! | GCGCGGGAGCGGGTGCGTAG+CGG | + | chr1.4:88454416-88454435 | None:intergenic | 80.0% |
| ! | CTCCTCCGACGCGGCGGCGG+TGG | - | chr1.4:88451641-88451660 | MS.gene90109:CDS | 85.0% |
| ! | TGCCACCGCCGCCGCGTCGG+AGG | + | chr1.4:88451646-88451665 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 88451578 | 88457320 | 88451578 | ID=MS.gene90109 |
| chr1.4 | mRNA | 88451578 | 88457320 | 88451578 | ID=MS.gene90109.t1;Parent=MS.gene90109 |
| chr1.4 | exon | 88456997 | 88457320 | 88456997 | ID=MS.gene90109.t1.exon1;Parent=MS.gene90109.t1 |
| chr1.4 | CDS | 88456997 | 88457320 | 88456997 | ID=cds.MS.gene90109.t1;Parent=MS.gene90109.t1 |
| chr1.4 | exon | 88456773 | 88456882 | 88456773 | ID=MS.gene90109.t1.exon2;Parent=MS.gene90109.t1 |
| chr1.4 | CDS | 88456773 | 88456882 | 88456773 | ID=cds.MS.gene90109.t1;Parent=MS.gene90109.t1 |
| chr1.4 | exon | 88456330 | 88456686 | 88456330 | ID=MS.gene90109.t1.exon3;Parent=MS.gene90109.t1 |
| chr1.4 | CDS | 88456330 | 88456686 | 88456330 | ID=cds.MS.gene90109.t1;Parent=MS.gene90109.t1 |
| chr1.4 | exon | 88455811 | 88456061 | 88455811 | ID=MS.gene90109.t1.exon4;Parent=MS.gene90109.t1 |
| chr1.4 | CDS | 88455811 | 88456061 | 88455811 | ID=cds.MS.gene90109.t1;Parent=MS.gene90109.t1 |
| chr1.4 | exon | 88452632 | 88452938 | 88452632 | ID=MS.gene90109.t1.exon5;Parent=MS.gene90109.t1 |
| chr1.4 | CDS | 88452632 | 88452938 | 88452632 | ID=cds.MS.gene90109.t1;Parent=MS.gene90109.t1 |
| chr1.4 | exon | 88452279 | 88452552 | 88452279 | ID=MS.gene90109.t1.exon6;Parent=MS.gene90109.t1 |
| chr1.4 | CDS | 88452279 | 88452552 | 88452279 | ID=cds.MS.gene90109.t1;Parent=MS.gene90109.t1 |
| chr1.4 | exon | 88451578 | 88451832 | 88451578 | ID=MS.gene90109.t1.exon7;Parent=MS.gene90109.t1 |
| chr1.4 | CDS | 88451578 | 88451832 | 88451578 | ID=cds.MS.gene90109.t1;Parent=MS.gene90109.t1 |
| Gene Sequence |
| Protein sequence |
