Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061089.t1 | RHN78184.1 | 96.8 | 616 | 7 | 1 | 1 | 603 | 1 | 616 | 0.00E+00 | 1182.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061089.t1 | Q41140 | 85.7 | 610 | 74 | 1 | 1 | 597 | 1 | 610 | 9.5e-309 | 1060.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061089.t1 | A0A396JLW5 | 96.8 | 616 | 7 | 1 | 1 | 603 | 1 | 616 | 0.0e+00 | 1182.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05652 | MS.gene061089 | 0.80254 | 5.34E-49 | -1.69E-46 |
| MS.gene058128 | MS.gene061089 | 0.80903 | 2.31E-50 | -1.69E-46 |
| MS.gene061089 | MS.gene065314 | 0.817637 | 2.97E-52 | -1.69E-46 |
| MS.gene061089 | MS.gene29942 | 0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene061089 | MS.gene31917 | 0.800159 | 1.64E-48 | -1.69E-46 |
| MS.gene061089 | MS.gene31973 | 0.822007 | 2.98E-53 | -1.69E-46 |
| MS.gene061089 | MS.gene39469 | 0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene061089 | MS.gene41190 | 0.832872 | 7.38E-56 | -1.69E-46 |
| MS.gene061089 | MS.gene61094 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene061089 | MS.gene90109 | -0.807929 | 3.98E-50 | -1.69E-46 |
| MS.gene061089 | MS.gene93762 | 0.801556 | 8.51E-49 | -1.69E-46 |
| MS.gene061089 | MS.gene94553 | 0.806912 | 6.53E-50 | -1.69E-46 |
| MS.gene061089 | MS.gene94954 | 0.807107 | 5.94E-50 | -1.69E-46 |
| MS.gene061089 | MS.gene99885 | 0.802183 | 6.33E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061089.t1 | MTR_1g035230 | 93.669 | 616 | 7 | 2 | 1 | 603 | 1 | 597 | 0.0 | 1174 |
| MS.gene061089.t1 | MTR_2g025020 | 40.619 | 549 | 296 | 8 | 12 | 545 | 27 | 560 | 1.51e-129 | 392 |
| MS.gene061089.t1 | MTR_4g132700 | 38.686 | 548 | 308 | 6 | 12 | 545 | 31 | 564 | 8.94e-124 | 377 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061089.t1 | AT1G20950 | 80.619 | 614 | 104 | 2 | 1 | 599 | 1 | 614 | 0.0 | 1033 |
| MS.gene061089.t1 | AT1G76550 | 80.431 | 603 | 105 | 1 | 1 | 590 | 1 | 603 | 0.0 | 1028 |
| MS.gene061089.t1 | AT4G04040 | 40.307 | 521 | 284 | 6 | 40 | 545 | 56 | 564 | 2.19e-128 | 389 |
| MS.gene061089.t1 | AT1G12000 | 39.599 | 548 | 302 | 6 | 12 | 545 | 30 | 562 | 1.86e-125 | 381 |
| MS.gene061089.t1 | AT5G56630 | 25.418 | 299 | 189 | 9 | 67 | 350 | 75 | 354 | 2.40e-14 | 76.3 |
| MS.gene061089.t1 | AT5G61580 | 24.719 | 267 | 174 | 7 | 67 | 327 | 126 | 371 | 9.33e-11 | 65.1 |
| MS.gene061089.t1 | AT5G61580 | 24.719 | 267 | 174 | 7 | 67 | 327 | 126 | 371 | 9.85e-11 | 65.1 |
Find 142 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTATTTCATTCGTCTTA+TGG | 0.195416 | 1.4:-19175989 | MS.gene061089:CDS |
| AATCCAAGCAAAACATTCTT+AGG | 0.212478 | 1.4:+19177441 | None:intergenic |
| CTGGTGGACACAATGTTATT+TGG | 0.218175 | 1.4:-19177494 | MS.gene061089:CDS |
| AATTTCTACCACCATTTATT+AGG | 0.231187 | 1.4:-19175286 | MS.gene061089:CDS |
| AAAGGTTGTCCATAGGTATT+AGG | 0.237212 | 1.4:+19177728 | None:intergenic |
| TGGTGGACACAATGTTATTT+GGG | 0.250228 | 1.4:-19177493 | MS.gene061089:CDS |
| ACAACTGTTAGGGTTGAATT+TGG | 0.255337 | 1.4:-19177806 | MS.gene061089:CDS |
| CCACATTTCCACTTGTTTAC+AGG | 0.258480 | 1.4:+19174661 | None:intergenic |
| TCTTTCGTGAAATTTCAAAA+AGG | 0.283449 | 1.4:+19175779 | None:intergenic |
| TATTATTTCATTCGTCTTAT+GGG | 0.287177 | 1.4:-19175988 | MS.gene061089:CDS |
| ACTACCATGGATTCTGATTA+TGG | 0.291956 | 1.4:-19178275 | None:intergenic |
| TGCAACAATTTGAAACTTGA+TGG | 0.294729 | 1.4:-19176724 | MS.gene061089:CDS |
| AAATGCGACAAGCTTTCTTA+TGG | 0.298663 | 1.4:-19173924 | MS.gene061089:CDS |
| TTTACCTGTCTCCTAATAAA+TGG | 0.301618 | 1.4:+19175275 | None:intergenic |
| TGCTCTGTTCAGGTAATTCT+TGG | 0.312281 | 1.4:-19175829 | MS.gene061089:intron |
| TGGCTTTGACACAATTTCTA+AGG | 0.313857 | 1.4:-19176302 | MS.gene061089:intron |
| CAATCAGACCCTCTGGAATA+AGG | 0.318332 | 1.4:+19175595 | None:intergenic |
| ACATTAATTCATACCATGTT+TGG | 0.319572 | 1.4:+19175919 | None:intergenic |
| TAACCGAACACCCTCCTATT+AGG | 0.325424 | 1.4:-19177658 | MS.gene061089:intron |
| AATAGATAAACTAACCTAAT+AGG | 0.330539 | 1.4:+19177644 | None:intergenic |
| CAACATTTGTTTCCACAAAC+TGG | 0.335130 | 1.4:+19176323 | None:intergenic |
| CCAGGCCCGCTTCAGTTTGA+TGG | 0.342585 | 1.4:-19173884 | MS.gene061089:CDS |
| ATTGATGTGGCTCCAGGATT+AGG | 0.347191 | 1.4:+19174456 | None:intergenic |
| TGTGCTGAGTCATCTGATTC+AGG | 0.349636 | 1.4:+19175114 | None:intergenic |
| ATGTGCAGGGAACAACTGTT+AGG | 0.350716 | 1.4:-19177817 | MS.gene061089:intron |
| CTTGATGGCCTTGTCATCAT+TGG | 0.353269 | 1.4:-19176709 | MS.gene061089:CDS |
| TTGAAGATCTGAGAGTTCTC+TGG | 0.355423 | 1.4:+19178247 | None:intergenic |
| TGAAGACAAGGAGGGAGTTC+AGG | 0.358858 | 1.4:+19178203 | None:intergenic |
| TCAAACCAGCAGCTAGTATA+TGG | 0.361979 | 1.4:+19174719 | None:intergenic |
| TTGATGTTATTGCAGGTTCT+TGG | 0.362451 | 1.4:-19174754 | MS.gene061089:intron |
| CCGCTTCAGTTTGATGGTCC+TGG | 0.386204 | 1.4:-19173878 | MS.gene061089:CDS |
| GGCGGACGAAAGATCAAATT+AGG | 0.387319 | 1.4:-19176780 | MS.gene061089:CDS |
| CCATCAAACTGAAGCGGGCC+TGG | 0.394290 | 1.4:+19173884 | None:intergenic |
| AAAGATTGCTGATGCAGTTC+AGG | 0.395394 | 1.4:-19175761 | MS.gene061089:CDS |
| TCAGAGGGATGAAGTGTTGC+CGG | 0.403240 | 1.4:+19173230 | None:intergenic |
| TTCAAAAGCGCATACACTTC+AGG | 0.404054 | 1.4:+19175564 | None:intergenic |
| GGTGTTCCTGTGACTTTGAA+TGG | 0.404865 | 1.4:-19176358 | MS.gene061089:CDS |
| TTTCCGATTGATGTGGCTCC+AGG | 0.406513 | 1.4:+19174450 | None:intergenic |
| ATACTAGCTGCTGGTTTGAA+TGG | 0.408369 | 1.4:-19174715 | MS.gene061089:CDS |
| AACAGATTATATACCTTTGT+AGG | 0.410321 | 1.4:+19176540 | None:intergenic |
| ACCGCCATGTCATCATCTTC+CGG | 0.411959 | 1.4:-19173249 | MS.gene061089:CDS |
| TCTTCGACATTAAGAGTGAT+AGG | 0.420552 | 1.4:+19173842 | None:intergenic |
| CTTTCTTCAGGTGGGTCAGA+AGG | 0.428161 | 1.4:-19176984 | MS.gene061089:intron |
| TAGGTGGTTATGATTTGCTT+GGG | 0.438309 | 1.4:-19176801 | MS.gene061089:CDS |
| TTACTCAGACAAGGTGTTGA+TGG | 0.440925 | 1.4:-19175356 | MS.gene061089:CDS |
| GGGAAAGATCTACTTATAGT+AGG | 0.451476 | 1.4:+19177749 | None:intergenic |
| TTAGGTGGTTATGATTTGCT+TGG | 0.454502 | 1.4:-19176802 | MS.gene061089:intron |
| CCTCTCAAATCCACAGTAGC+TGG | 0.454837 | 1.4:+19174414 | None:intergenic |
| TAATACCTATGGACAACCTT+TGG | 0.461790 | 1.4:-19177726 | MS.gene061089:CDS |
| TCAAGTTAGTTACAGTTGCC+AGG | 0.469100 | 1.4:+19174689 | None:intergenic |
| GGGTCGCATCAAGAGACTTC+AGG | 0.472536 | 1.4:-19173807 | MS.gene061089:CDS |
| ACCACCATTTATTAGGAGAC+AGG | 0.472543 | 1.4:-19175279 | MS.gene061089:intron |
| GACGATATTTATAGAAATCC+AGG | 0.473937 | 1.4:-19173902 | MS.gene061089:CDS |
| TAGTCACAGTCAAACTTTGA+TGG | 0.474855 | 1.4:+19174856 | None:intergenic |
| TGAAGATCTGAGAGTTCTCT+GGG | 0.476135 | 1.4:+19178248 | None:intergenic |
| AAGGTTGTCCATAGGTATTA+GGG | 0.477959 | 1.4:+19177729 | None:intergenic |
| TGCAGACATTGCTGATGAGC+TGG | 0.479311 | 1.4:+19176123 | None:intergenic |
| AAAGCAGCTTTGAGCGTCAT+GGG | 0.481351 | 1.4:-19173291 | MS.gene061089:CDS |
| AATCCTGGAGCCACATCAAT+CGG | 0.486016 | 1.4:-19174453 | MS.gene061089:CDS |
| AGATCTCCATTCAAAGTCAC+AGG | 0.487784 | 1.4:+19176352 | None:intergenic |
| GATGGCCTTGTCATCATTGG+AGG | 0.491841 | 1.4:-19176706 | MS.gene061089:intron |
| TAACCTAATAGGAGGGTGTT+CGG | 0.492239 | 1.4:+19177655 | None:intergenic |
| ATGCTCTCAATCAGACCCTC+TGG | 0.492322 | 1.4:+19175588 | None:intergenic |
| TGACTCAGCACAGTTGTCTC+AGG | 0.493591 | 1.4:-19175103 | MS.gene061089:intron |
| AAGCGTTGGTCTCCTAATCC+TGG | 0.494473 | 1.4:-19174468 | MS.gene061089:CDS |
| AGCTAGTCAGCTTTCACCAT+GGG | 0.495220 | 1.4:-19175324 | MS.gene061089:CDS |
| ACTTCAGGAGTACCTTGAAC+AGG | 0.495756 | 1.4:-19173792 | MS.gene061089:intron |
| TGCTGGTTTGAATGGATACC+TGG | 0.497297 | 1.4:-19174707 | MS.gene061089:CDS |
| TCGGTTATGATCTGAGCATC+AGG | 0.498646 | 1.4:+19177674 | None:intergenic |
| AGATCTTTCCCTAATACCTA+TGG | 0.500361 | 1.4:-19177737 | MS.gene061089:CDS |
| TAATTGACAATACCTGTTCA+AGG | 0.502437 | 1.4:+19173780 | None:intergenic |
| TAATTCATACCATGTTTGGA+TGG | 0.503177 | 1.4:+19175923 | None:intergenic |
| TGCTACCATATACTAGCTGC+TGG | 0.504321 | 1.4:-19174724 | MS.gene061089:CDS |
| TGTCGAAGACCAAGACTACA+TGG | 0.506089 | 1.4:-19173828 | MS.gene061089:CDS |
| TGATGCGACCCATGTAGTCT+TGG | 0.511987 | 1.4:+19173819 | None:intergenic |
| ACAGTAGCTGGATGGATGGC+AGG | 0.514965 | 1.4:+19174426 | None:intergenic |
| GAAAGCAGCTTTGAGCGTCA+TGG | 0.524980 | 1.4:-19173292 | MS.gene061089:CDS |
| CTTATAGTAGGCTCATCAGC+TGG | 0.526158 | 1.4:+19177761 | None:intergenic |
| GTACGGACCATTGTAAAGCC+AGG | 0.530855 | 1.4:-19173333 | MS.gene061089:CDS |
| CAGTTTGTGGAAACAAATGT+TGG | 0.531669 | 1.4:-19176322 | MS.gene061089:CDS |
| AATTCATACCATGTTTGGAT+GGG | 0.532664 | 1.4:+19175924 | None:intergenic |
| TCAGGTAATTCTTGGTGAGG+AGG | 0.534417 | 1.4:-19175821 | MS.gene061089:intron |
| ATTGTGATTATGCAGGTGGT+TGG | 0.535844 | 1.4:-19176379 | MS.gene061089:intron |
| CACAGTCAAACTTTGATGGA+AGG | 0.538254 | 1.4:+19174860 | None:intergenic |
| CAGGACCATCAAACTGAAGC+GGG | 0.539235 | 1.4:+19173879 | None:intergenic |
| ACAGATTATATACCTTTGTA+GGG | 0.539473 | 1.4:+19176541 | None:intergenic |
| CAAGGCATCACATGTTGCAT+TGG | 0.540792 | 1.4:-19175962 | MS.gene061089:CDS |
| AGATAAACTAACCTAATAGG+AGG | 0.545743 | 1.4:+19177647 | None:intergenic |
| ATAGGCTTGGCATCTGCACC+AGG | 0.546073 | 1.4:+19173860 | None:intergenic |
| CATTCGTCTTATGGGACGCA+AGG | 0.564401 | 1.4:-19175980 | MS.gene061089:CDS |
| ATCCACAGTAGCTGGATGGA+TGG | 0.566104 | 1.4:+19174422 | None:intergenic |
| TGAAGAATCCTGTAAACAAG+TGG | 0.566584 | 1.4:-19174669 | MS.gene061089:CDS |
| GCTGCTTTCAGAACCTCTTG+AGG | 0.572074 | 1.4:+19173306 | None:intergenic |
| GACATTAAGAGTGATAGGCT+TGG | 0.572400 | 1.4:+19173847 | None:intergenic |
| CTATGATGACGGTGAAGCGT+TGG | 0.572709 | 1.4:-19174482 | MS.gene061089:CDS |
| AATACCATAATCAGAATCCA+TGG | 0.575233 | 1.4:+19178271 | None:intergenic |
| TCAAATCCACAGTAGCTGGA+TGG | 0.575789 | 1.4:+19174418 | None:intergenic |
| CAAATAACATTGTGTCCACC+AGG | 0.577263 | 1.4:+19177495 | None:intergenic |
| ACAGTCAAACTTTGATGGAA+GGG | 0.578686 | 1.4:+19174861 | None:intergenic |
| TGATGCTCTCTCTGCAGAGA+AGG | 0.580031 | 1.4:-19176099 | MS.gene061089:intron |
| GTTAGGGTTGAATTTGGTGA+TGG | 0.581275 | 1.4:-19177800 | MS.gene061089:CDS |
| TCCAAAATGTCACATTCAGA+GGG | 0.582786 | 1.4:+19173215 | None:intergenic |
| AGAACCTCTTGAGGACACCC+TGG | 0.583596 | 1.4:+19173315 | None:intergenic |
| GGCGGTTAGAACTTCGGTAA+CGG | 0.584993 | 1.4:+19173266 | None:intergenic |
| TGACATGGCGGTTAGAACTT+CGG | 0.586840 | 1.4:+19173260 | None:intergenic |
| TGTTCAGGTAATTCTTGGTG+AGG | 0.589535 | 1.4:-19175824 | MS.gene061089:intron |
| GGTGGACACAATGTTATTTG+GGG | 0.591154 | 1.4:-19177492 | MS.gene061089:CDS |
| TGCCATCCATCCAGCTACTG+TGG | 0.595954 | 1.4:-19174424 | MS.gene061089:CDS |
| AGGACACCCTGGCTTTACAA+TGG | 0.596253 | 1.4:+19173326 | None:intergenic |
| GCCCTAAGAAAATGAGCCAA+AGG | 0.596725 | 1.4:+19177710 | None:intergenic |
| CCAGGACCATCAAACTGAAG+CGG | 0.598022 | 1.4:+19173878 | None:intergenic |
| TAGCTAGTCAGCTTTCACCA+TGG | 0.598932 | 1.4:-19175325 | MS.gene061089:CDS |
| TCGAATAAAGCAGAAGCCCA+TGG | 0.602724 | 1.4:+19175308 | None:intergenic |
| GACAAGGAGGGAGTTCAGGT+TGG | 0.602957 | 1.4:+19178207 | None:intergenic |
| TGTGCAGGGAACAACTGTTA+GGG | 0.602989 | 1.4:-19177816 | MS.gene061089:intron |
| GCAGACATTGCTGATGAGCT+GGG | 0.605421 | 1.4:+19176124 | None:intergenic |
| ATGAGCCAAAGGTTGTCCAT+AGG | 0.605710 | 1.4:+19177721 | None:intergenic |
| AGCAGCATTAACTTGTTCAG+TGG | 0.606084 | 1.4:+19176756 | None:intergenic |
| TGAAAACTCACTTGAAGACA+AGG | 0.614230 | 1.4:+19178191 | None:intergenic |
| CCAGCTACTGTGGATTTGAG+AGG | 0.614758 | 1.4:-19174414 | MS.gene061089:CDS |
| GATAAACTAACCTAATAGGA+GGG | 0.615627 | 1.4:+19177648 | None:intergenic |
| CCTGTAAACAAGTGGAAATG+TGG | 0.618788 | 1.4:-19174661 | MS.gene061089:CDS |
| TCTTCAGTCCCATCCAAACA+TGG | 0.619255 | 1.4:-19175932 | MS.gene061089:intron |
| GGAGTAATCCTTATTCCAGA+GGG | 0.625007 | 1.4:-19175603 | MS.gene061089:CDS |
| ACCTGTCTCCTAATAAATGG+TGG | 0.625063 | 1.4:+19175278 | None:intergenic |
| TACGGACCATTGTAAAGCCA+GGG | 0.628160 | 1.4:-19173332 | MS.gene061089:CDS |
| TCTGGAAGACAATCTCCTGG+TGG | 0.634764 | 1.4:-19177510 | MS.gene061089:CDS |
| TGGAGTAATCCTTATTCCAG+AGG | 0.640020 | 1.4:-19175604 | MS.gene061089:CDS |
| GTGGTTATGATTTGCTTGGG+CGG | 0.640052 | 1.4:-19176798 | MS.gene061089:CDS |
| TGTTGCAAAATGCCCTACAA+AGG | 0.640320 | 1.4:-19176553 | MS.gene061089:intron |
| AAAGCCAGGGTGTCCTCAAG+AGG | 0.643003 | 1.4:-19173319 | MS.gene061089:CDS |
| TGTTTATCTCTACTTCCACA+AGG | 0.644541 | 1.4:+19174962 | None:intergenic |
| GAAACTTCTAGCTTACCTTG+TGG | 0.660322 | 1.4:-19174977 | MS.gene061089:CDS |
| AACTCACTTGAAGACAAGGA+GGG | 0.661691 | 1.4:+19178195 | None:intergenic |
| TTATACCTCCAATGATGACA+AGG | 0.664015 | 1.4:+19176701 | None:intergenic |
| GTTCAGGCTAGATCAGAACA+AGG | 0.679660 | 1.4:-19175745 | MS.gene061089:intron |
| AAACTCACTTGAAGACAAGG+AGG | 0.693947 | 1.4:+19178194 | None:intergenic |
| TGAACTTTAGGCTATGATGA+CGG | 0.695307 | 1.4:-19174493 | MS.gene061089:intron |
| AAGCAGCTTTGAGCGTCATG+GGG | 0.695413 | 1.4:-19173290 | MS.gene061089:CDS |
| GTCGAAGACCAAGACTACAT+GGG | 0.713202 | 1.4:-19173827 | MS.gene061089:CDS |
| GTTGCCGGAAGATGATGACA+TGG | 0.735016 | 1.4:+19173245 | None:intergenic |
| GCCGGAAGATGATGACATGG+CGG | 0.778158 | 1.4:+19173248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATATATTTTGTTTAAATA+TGG | - | chr1.4:19176250-19176269 | MS.gene061089:intron | 10.0% |
| !! | CAAAAAAACATTATCTAATA+TGG | + | chr1.4:19176966-19176985 | None:intergenic | 15.0% |
| !! | TATAATCTCATTTAATGATA+TGG | - | chr1.4:19177854-19177873 | MS.gene061089:intron | 15.0% |
| !!! | AATTTTCAAAGTGTTTAAAT+AGG | + | chr1.4:19175248-19175267 | None:intergenic | 15.0% |
| !!! | CATAGTTTTTTAAAAAATGA+CGG | + | chr1.4:19174268-19174287 | None:intergenic | 15.0% |
| !!! | GGTTTTATATAATATATCTA+TGG | - | chr1.4:19176937-19176956 | MS.gene061089:CDS | 15.0% |
| !!! | TTTTTTGTTTTTGGATTTTT+GGG | - | chr1.4:19173452-19173471 | MS.gene061089:intron | 15.0% |
| !!! | TTTTTTTGTTTTTGGATTTT+TGG | - | chr1.4:19173451-19173470 | MS.gene061089:intron | 15.0% |
| !!! | TTTTTTTTTTTTGTTTACTC+AGG | - | chr1.4:19175346-19175365 | MS.gene061089:CDS | 15.0% |
| !! | AATAAAGAAAATGTGAAAAC+TGG | + | chr1.4:19175805-19175824 | None:intergenic | 20.0% |
| !! | AATAGATAAACTAACCTAAT+AGG | + | chr1.4:19173858-19173877 | None:intergenic | 20.0% |
| !! | ACCTGATAAAATACAAAATT+CGG | + | chr1.4:19174882-19174901 | None:intergenic | 20.0% |
| !! | ATCGAAAAATTCAAATCTTA+TGG | - | chr1.4:19177800-19177819 | MS.gene061089:CDS | 20.0% |
| !! | ATTTCCTTTGATTAAGTATT+AGG | - | chr1.4:19176686-19176705 | MS.gene061089:intron | 20.0% |
| !! | TAAATCACAATTGTTTGTAA+AGG | + | chr1.4:19177771-19177790 | None:intergenic | 20.0% |
| !! | TATTATTTCATTCGTCTTAT+GGG | - | chr1.4:19175511-19175530 | MS.gene061089:intron | 20.0% |
| !! | TCATTTCATATGTATTTACT+AGG | + | chr1.4:19175441-19175460 | None:intergenic | 20.0% |
| !! | TTAACTATTGACAATAAACA+CGG | + | chr1.4:19175994-19176013 | None:intergenic | 20.0% |
| !! | TTATTATTTCATTCGTCTTA+TGG | - | chr1.4:19175510-19175529 | MS.gene061089:intron | 20.0% |
| !! | TTTAAAAAACTATGTATGCT+TGG | - | chr1.4:19174181-19174200 | MS.gene061089:intron | 20.0% |
| !!! | ATTTATTCTTTTTTTTTCCC+CGG | - | chr1.4:19175822-19175841 | MS.gene061089:intron | 20.0% |
| !!! | CGTCATTTTTTAAAAAACTA+TGG | - | chr1.4:19174266-19174285 | MS.gene061089:intron | 20.0% |
| !!! | GATGTTTATTGAGATATTTT+AGG | + | chr1.4:19177975-19177994 | None:intergenic | 20.0% |
| !!! | TTGATTGTTTCTTATGAATA+TGG | - | chr1.4:19176059-19176078 | MS.gene061089:intron | 20.0% |
| !!! | TTTATGTTTTTTTGTGAGAT+GGG | - | chr1.4:19173492-19173511 | MS.gene061089:intron | 20.0% |
| !!! | TTTTATGTTTTTTTGTGAGA+TGG | - | chr1.4:19173491-19173510 | MS.gene061089:intron | 20.0% |
| !!! | TTTTGATTTGTTTTTGACTT+GGG | - | chr1.4:19173398-19173417 | MS.gene061089:intron | 20.0% |
| !!! | TTTTTGATTTGTTTTTGACT+TGG | - | chr1.4:19173397-19173416 | MS.gene061089:intron | 20.0% |
| ! | AAAAAGAAACGTACTGAAAT+TGG | + | chr1.4:19176871-19176890 | None:intergenic | 25.0% |
| ! | AAAAGAAAATTCAGTCAGAA+AGG | + | chr1.4:19175484-19175503 | None:intergenic | 25.0% |
| ! | AACAGATTATATACCTTTGT+AGG | + | chr1.4:19174962-19174981 | None:intergenic | 25.0% |
| ! | AATTTCTACCACCATTTATT+AGG | - | chr1.4:19176213-19176232 | MS.gene061089:intron | 25.0% |
| ! | ACAGATTATATACCTTTGTA+GGG | + | chr1.4:19174961-19174980 | None:intergenic | 25.0% |
| ! | ACATTAATTCATACCATGTT+TGG | + | chr1.4:19175583-19175602 | None:intergenic | 25.0% |
| ! | CAATAGAACAAACAAACAAT+CGG | + | chr1.4:19175622-19175641 | None:intergenic | 25.0% |
| ! | CAGTAATAATTTACTGATCA+TGG | - | chr1.4:19175095-19175114 | MS.gene061089:intron | 25.0% |
| ! | CGATTGACTAATAATAACAA+TGG | + | chr1.4:19174623-19174642 | None:intergenic | 25.0% |
| ! | CTAACCTAATACTTAATCAA+AGG | + | chr1.4:19176693-19176712 | None:intergenic | 25.0% |
| ! | CTTTCGTGAAATTTCAAAAA+GGG | + | chr1.4:19175722-19175741 | None:intergenic | 25.0% |
| ! | GATAAATAGCTTAGTTAAGT+GGG | - | chr1.4:19177173-19177192 | MS.gene061089:intron | 25.0% |
| ! | TAAATTACAGTCATATTGCT+TGG | - | chr1.4:19177506-19177525 | MS.gene061089:CDS | 25.0% |
| ! | TAACAAATATCTGCATTACA+TGG | + | chr1.4:19174460-19174479 | None:intergenic | 25.0% |
| ! | TAACTATTGACAATAAACAC+GGG | + | chr1.4:19175993-19176012 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATCCAAAT+GGG | - | chr1.4:19176016-19176035 | MS.gene061089:intron | 25.0% |
| ! | TCAATATAATTGCATGTGTT+TGG | + | chr1.4:19174437-19174456 | None:intergenic | 25.0% |
| ! | TCTTAGCATAAATACTGAAT+CGG | - | chr1.4:19177828-19177847 | MS.gene061089:intron | 25.0% |
| ! | TCTTTCGTGAAATTTCAAAA+AGG | + | chr1.4:19175723-19175742 | None:intergenic | 25.0% |
| !! | TCTATTTTCTCAGAAAACTT+TGG | - | chr1.4:19174538-19174557 | MS.gene061089:intron | 25.0% |
| !! | TTAGTCAATCGATTATTTCT+CGG | - | chr1.4:19174632-19174651 | MS.gene061089:intron | 25.0% |
| !! | TTTTGTGAGATTTAGATCTT+GGG | - | chr1.4:19173348-19173367 | MS.gene061089:intron | 25.0% |
| !! | TTTTGTTCAGACAAATATCA+TGG | - | chr1.4:19175875-19175894 | MS.gene061089:intron | 25.0% |
| !! | TTTTTGTGAGATTTAGATCT+TGG | - | chr1.4:19173347-19173366 | MS.gene061089:intron | 25.0% |
| !!! | AACTTGTTATTATCATACGA+TGG | - | chr1.4:19174664-19174683 | MS.gene061089:CDS | 25.0% |
| !!! | ATTTGAATGTAATGGACTAA+TGG | - | chr1.4:19173524-19173543 | MS.gene061089:intron | 25.0% |
| !!! | GATTTGTTGATGTTTTTTGT+CGG | - | chr1.4:19173885-19173904 | MS.gene061089:CDS | 25.0% |
| !!! | GGTTTTGAATTTGATCAAAT+GGG | - | chr1.4:19173419-19173438 | MS.gene061089:intron | 25.0% |
| !!! | GTTTTGAATTTGATCAAATG+GGG | - | chr1.4:19173420-19173439 | MS.gene061089:intron | 25.0% |
| !!! | GTTTTTGACTTTGATGAAAT+GGG | - | chr1.4:19173563-19173582 | MS.gene061089:intron | 25.0% |
| !!! | TAATTTGTTGATGTTATTGC+AGG | - | chr1.4:19176738-19176757 | MS.gene061089:CDS | 25.0% |
| !!! | TGAAGTTTTGATTTTGAGAT+TGG | - | chr1.4:19173614-19173633 | MS.gene061089:intron | 25.0% |
| !!! | TGGACTTGTTTTTTTGTTTT+TGG | - | chr1.4:19173443-19173462 | MS.gene061089:intron | 25.0% |
| !!! | TGTTTTTGACTTTGATGAAA+TGG | - | chr1.4:19173562-19173581 | MS.gene061089:intron | 25.0% |
| !!! | TTTGAATGTAATGGACTAAT+GGG | - | chr1.4:19173525-19173544 | MS.gene061089:intron | 25.0% |
| !!! | TTTTTGACTTTGATGAAATG+GGG | - | chr1.4:19173564-19173583 | MS.gene061089:intron | 25.0% |
| AAAACTATGTATGCTTGGAT+TGG | - | chr1.4:19174186-19174205 | MS.gene061089:intron | 30.0% | |
| AATAAAGTCAAGAGTCTGTT+TGG | + | chr1.4:19177400-19177419 | None:intergenic | 30.0% | |
| AATCCAAGCAAAACATTCTT+AGG | + | chr1.4:19174061-19174080 | None:intergenic | 30.0% | |
| AATTCATACCATGTTTGGAT+GGG | + | chr1.4:19175578-19175597 | None:intergenic | 30.0% | |
| ACTAAGCTATTTATCCAAAC+AGG | + | chr1.4:19177168-19177187 | None:intergenic | 30.0% | |
| AGATAAACTAACCTAATAGG+AGG | + | chr1.4:19173855-19173874 | None:intergenic | 30.0% | |
| AGATCTAAAAAACCAGTTTG+TGG | - | chr1.4:19175164-19175183 | MS.gene061089:intron | 30.0% | |
| ATGCAATCTTAATCCATTCT+TGG | - | chr1.4:19176088-19176107 | MS.gene061089:intron | 30.0% | |
| ATGTGTTTGCAATGAACTTT+AGG | - | chr1.4:19176994-19177013 | MS.gene061089:intron | 30.0% | |
| ATTTGTCCAATGATCTGAAA+TGG | - | chr1.4:19174997-19175016 | MS.gene061089:intron | 30.0% | |
| CAACTAACATCAATGACAAA+AGG | + | chr1.4:19176042-19176061 | None:intergenic | 30.0% | |
| CATGTGAATAACAAATCATC+TGG | + | chr1.4:19176431-19176450 | None:intergenic | 30.0% | |
| CTAAGCTATTTATCCAAACA+GGG | + | chr1.4:19177167-19177186 | None:intergenic | 30.0% | |
| CTAAGGTATATTTCCTATCA+GGG | - | chr1.4:19175214-19175233 | MS.gene061089:intron | 30.0% | |
| CTCAAATAAGTCAATCCAAA+TGG | - | chr1.4:19176015-19176034 | MS.gene061089:intron | 30.0% | |
| CTTAGCATATCTACAAACAA+TGG | + | chr1.4:19177372-19177391 | None:intergenic | 30.0% | |
| GACGATATTTATAGAAATCC+AGG | - | chr1.4:19177597-19177616 | MS.gene061089:intron | 30.0% | |
| GATAAACTAACCTAATAGGA+GGG | + | chr1.4:19173854-19173873 | None:intergenic | 30.0% | |
| GGATAAATAGCTTAGTTAAG+TGG | - | chr1.4:19177172-19177191 | MS.gene061089:intron | 30.0% | |
| GGTGATGAATTTGAATGTAA+TGG | - | chr1.4:19173516-19173535 | MS.gene061089:intron | 30.0% | |
| GTGATGAATTTGGATGTAAT+GGG | - | chr1.4:19173639-19173658 | MS.gene061089:intron | 30.0% | |
| TAATTCATACCATGTTTGGA+TGG | + | chr1.4:19175579-19175598 | None:intergenic | 30.0% | |
| TAATTGACAATACCTGTTCA+AGG | + | chr1.4:19177722-19177741 | None:intergenic | 30.0% | |
| TACGATGGATGTTCTTTATT+AGG | - | chr1.4:19174679-19174698 | MS.gene061089:CDS | 30.0% | |
| TGATGAATTTGGATGTAATG+GGG | - | chr1.4:19173640-19173659 | MS.gene061089:intron | 30.0% | |
| TTAGGAAGTGATAAACAAAC+TGG | + | chr1.4:19177957-19177976 | None:intergenic | 30.0% | |
| TTATTTACTATGCTCTGTTC+AGG | - | chr1.4:19175660-19175679 | MS.gene061089:intron | 30.0% | |
| TTTACCTGTCTCCTAATAAA+TGG | + | chr1.4:19176227-19176246 | None:intergenic | 30.0% | |
| TTTGAGAGAACATAGGAAAA+CGG | + | chr1.4:19177329-19177348 | None:intergenic | 30.0% | |
| ! | AATCCTAAGAATGTTTTGCT+TGG | - | chr1.4:19174055-19174074 | MS.gene061089:intron | 30.0% |
| ! | AATGTTTTGCTTGGATTTCT+TGG | - | chr1.4:19174064-19174083 | MS.gene061089:intron | 30.0% |
| ! | GCCGAATTTTGTATTTTATC+AGG | - | chr1.4:19174878-19174897 | MS.gene061089:CDS | 30.0% |
| ! | TCTAAGGTATATTTCCTATC+AGG | - | chr1.4:19175213-19175232 | MS.gene061089:intron | 30.0% |
| ! | TGCAACAATTTGAAACTTGA+TGG | - | chr1.4:19174775-19174794 | MS.gene061089:intron | 30.0% |
| !! | AATGACGGTAATTTTAGTCT+TGG | + | chr1.4:19174253-19174272 | None:intergenic | 30.0% |
| !! | GCTATTTTCATAAGCTATCT+TGG | - | chr1.4:19177256-19177275 | MS.gene061089:intron | 30.0% |
| !! | TTGAATGTAATGGACTAATG+GGG | - | chr1.4:19173526-19173545 | MS.gene061089:intron | 30.0% |
| !! | TTTTGGTTAAAGCTACACTT+TGG | - | chr1.4:19174314-19174333 | MS.gene061089:intron | 30.0% |
| !!! | AGTTTTGATTTTGAGATTGG+TGG | - | chr1.4:19173617-19173636 | MS.gene061089:intron | 30.0% |
| !!! | GGGTTTTGAATTTGATCAAA+TGG | - | chr1.4:19173418-19173437 | MS.gene061089:intron | 30.0% |
| AAAGGAGAACAAAGACATGA+AGG | + | chr1.4:19176473-19176492 | None:intergenic | 35.0% | |
| AAAGGTTGTCCATAGGTATT+AGG | + | chr1.4:19173774-19173793 | None:intergenic | 35.0% | |
| AAATGCGACAAGCTTTCTTA+TGG | - | chr1.4:19177575-19177594 | MS.gene061089:intron | 35.0% | |
| AACTTGCACAACAAGAAATG+TGG | + | chr1.4:19178095-19178114 | None:intergenic | 35.0% | |
| AAGGTTGTCCATAGGTATTA+GGG | + | chr1.4:19173773-19173792 | None:intergenic | 35.0% | |
| ACAACAAGAAATGTGGATCA+TGG | + | chr1.4:19178088-19178107 | None:intergenic | 35.0% | |
| ACAACTGTTAGGGTTGAATT+TGG | - | chr1.4:19173693-19173712 | MS.gene061089:intron | 35.0% | |
| ACAGTCAAACTTTGATGGAA+GGG | + | chr1.4:19176641-19176660 | None:intergenic | 35.0% | |
| AGATCTTTCCCTAATACCTA+TGG | - | chr1.4:19173762-19173781 | MS.gene061089:intron | 35.0% | |
| ATATCAGATCTCAAAAGACC+GGG | + | chr1.4:19175843-19175862 | None:intergenic | 35.0% | |
| ATTGAAAAACAGTGATGCCA+TGG | + | chr1.4:19174409-19174428 | None:intergenic | 35.0% | |
| CAACAAGAAATGTGGATCAT+GGG | + | chr1.4:19178087-19178106 | None:intergenic | 35.0% | |
| CAACATTTGTTTCCACAAAC+TGG | + | chr1.4:19175179-19175198 | None:intergenic | 35.0% | |
| CAATCGGAAATAAATGATGC+AGG | + | chr1.4:19175606-19175625 | None:intergenic | 35.0% | |
| CAGAAAGAAGGAACATACAA+GGG | - | chr1.4:19176565-19176584 | MS.gene061089:CDS | 35.0% | |
| CAGTGGTTATTCATTCATGA+TGG | - | chr1.4:19176916-19176935 | MS.gene061089:intron | 35.0% | |
| CAGTTTGTGGAAACAAATGT+TGG | - | chr1.4:19175177-19175196 | MS.gene061089:intron | 35.0% | |
| CATGGTTATTGTGATTATGC+AGG | - | chr1.4:19175113-19175132 | MS.gene061089:CDS | 35.0% | |
| CCACATACAAAAATCAAGGT+TGG | - | chr1.4:19174582-19174601 | MS.gene061089:intron | 35.0% | |
| CTCTCCACATACAAAAATCA+AGG | - | chr1.4:19174578-19174597 | MS.gene061089:intron | 35.0% | |
| CTGCAATCAACAACATACAT+CGG | + | chr1.4:19177543-19177562 | None:intergenic | 35.0% | |
| GAGCTTGATATCCAAAAAAG+TGG | + | chr1.4:19176612-19176631 | None:intergenic | 35.0% | |
| GATATCAGATCTCAAAAGAC+CGG | + | chr1.4:19175844-19175863 | None:intergenic | 35.0% | |
| GATGGATGTTCTTTATTAGG+TGG | - | chr1.4:19174682-19174701 | MS.gene061089:CDS | 35.0% | |
| GCAACAGTCACATCTTTAAA+AGG | - | chr1.4:19174844-19174863 | MS.gene061089:intron | 35.0% | |
| GGGAAAGATCTACTTATAGT+AGG | + | chr1.4:19173753-19173772 | None:intergenic | 35.0% | |
| GGTGATGAATTTGGATGTAA+TGG | - | chr1.4:19173638-19173657 | MS.gene061089:intron | 35.0% | |
| GTCATTCCATTTCAGATCAT+TGG | + | chr1.4:19175006-19175025 | None:intergenic | 35.0% | |
| TAATACCTATGGACAACCTT+TGG | - | chr1.4:19173773-19173792 | MS.gene061089:intron | 35.0% | |
| TAGTCACAGTCAAACTTTGA+TGG | + | chr1.4:19176646-19176665 | None:intergenic | 35.0% | |
| TATTGACAATAAACACGGGT+GGG | + | chr1.4:19175989-19176008 | None:intergenic | 35.0% | |
| TCTTCGACATTAAGAGTGAT+AGG | + | chr1.4:19177660-19177679 | None:intergenic | 35.0% | |
| TGAAAACTCACTTGAAGACA+AGG | + | chr1.4:19173311-19173330 | None:intergenic | 35.0% | |
| TGAACTTTAGGCTATGATGA+CGG | - | chr1.4:19177006-19177025 | MS.gene061089:intron | 35.0% | |
| TGAAGAATCCTGTAAACAAG+TGG | - | chr1.4:19176830-19176849 | MS.gene061089:intron | 35.0% | |
| TGAATTTCCTGAGATGCAAA+AGG | + | chr1.4:19176119-19176138 | None:intergenic | 35.0% | |
| TGTTTATCTCTACTTCCACA+AGG | + | chr1.4:19176540-19176559 | None:intergenic | 35.0% | |
| TTATACCTCCAATGATGACA+AGG | + | chr1.4:19174801-19174820 | None:intergenic | 35.0% | |
| TTGAAAAACAGTGATGCCAT+GGG | + | chr1.4:19174408-19174427 | None:intergenic | 35.0% | |
| TTGAATTTGATCAAATGGGG+TGG | - | chr1.4:19173423-19173442 | MS.gene061089:intron | 35.0% | |
| TTGATGTTATTGCAGGTTCT+TGG | - | chr1.4:19176745-19176764 | MS.gene061089:CDS | 35.0% | |
| ! | ATTCACGTTTTACTCAGACA+AGG | - | chr1.4:19176134-19176153 | MS.gene061089:CDS | 35.0% |
| ! | ATTGGAGGTATAATTCTTCC+TGG | - | chr1.4:19174808-19174827 | MS.gene061089:intron | 35.0% |
| ! | CCAACCTTGATTTTTGTATG+TGG | + | chr1.4:19174585-19174604 | None:intergenic | 35.0% |
| ! | GCAAAAGGTTTTTCCAAGAA+TGG | + | chr1.4:19176104-19176123 | None:intergenic | 35.0% |
| ! | GCAGTGAATCATTGTGATTT+TGG | - | chr1.4:19174297-19174316 | MS.gene061089:intron | 35.0% |
| ! | GTCATATTGCTTGGTAGTTA+AGG | - | chr1.4:19177515-19177534 | MS.gene061089:CDS | 35.0% |
| ! | TGGTGGACACAATGTTATTT+GGG | - | chr1.4:19174006-19174025 | MS.gene061089:intron | 35.0% |
| ! | TGTTTATTTCTTGTGCTCAG+TGG | - | chr1.4:19176899-19176918 | MS.gene061089:intron | 35.0% |
| !! | AACCTTTGGCTCATTTTCTT+AGG | - | chr1.4:19173787-19173806 | MS.gene061089:intron | 35.0% |
| !! | ACCTTTGGCTCATTTTCTTA+GGG | - | chr1.4:19173788-19173807 | MS.gene061089:intron | 35.0% |
| !! | AGTCAGAAAGGTACTTCAAA+AGG | + | chr1.4:19175472-19175491 | None:intergenic | 35.0% |
| !! | CTACAAAGCATTGCATAGAA+AGG | + | chr1.4:19176491-19176510 | None:intergenic | 35.0% |
| !! | TAGGTGGTTATGATTTGCTT+GGG | - | chr1.4:19174698-19174717 | MS.gene061089:CDS | 35.0% |
| !! | TCATTTTTCTCGTTGTTGCT+AGG | - | chr1.4:19178144-19178163 | MS.gene061089:intron | 35.0% |
| !! | TGGCTTTGACACAATTTCTA+AGG | - | chr1.4:19175197-19175216 | MS.gene061089:intron | 35.0% |
| !! | TTAGGTGGTTATGATTTGCT+TGG | - | chr1.4:19174697-19174716 | MS.gene061089:CDS | 35.0% |
| !!! | AATGCGATTTGCCACTTTTT+TGG | - | chr1.4:19176598-19176617 | MS.gene061089:CDS | 35.0% |
| !!! | AGGGTTGGAATTGTTTTTTC+TGG | - | chr1.4:19173971-19173990 | MS.gene061089:intron | 35.0% |
| !!! | ATGTTTTTTTGTGAGATGGG+TGG | - | chr1.4:19173495-19173514 | MS.gene061089:intron | 35.0% |
| !!! | CATGGGTTAGCAAAATTTTC+CGG | + | chr1.4:19174391-19174410 | None:intergenic | 35.0% |
| !!! | GTGGACTTGTTTTTGGTTTT+TGG | - | chr1.4:19173586-19173605 | MS.gene061089:intron | 35.0% |
| !!! | TGTTACTGTTTTGATGTGCA+GGG | - | chr1.4:19173669-19173688 | MS.gene061089:intron | 35.0% |
| !!! | TTGTTACTGTTTTGATGTGC+AGG | - | chr1.4:19173668-19173687 | MS.gene061089:intron | 35.0% |
| !!! | TTTTTTGGATATCAAGCTCG+AGG | - | chr1.4:19176613-19176632 | MS.gene061089:intron | 35.0% |
| AAACTCACTTGAAGACAAGG+AGG | + | chr1.4:19173308-19173327 | None:intergenic | 40.0% | |
| AAAGATTGCTGATGCAGTTC+AGG | - | chr1.4:19175738-19175757 | MS.gene061089:intron | 40.0% | |
| AACTCACTTGAAGACAAGGA+GGG | + | chr1.4:19173307-19173326 | None:intergenic | 40.0% | |
| ACAAACAATGGCATATGCAC+TGG | + | chr1.4:19177360-19177379 | None:intergenic | 40.0% | |
| ACCACCATTTATTAGGAGAC+AGG | - | chr1.4:19176220-19176239 | MS.gene061089:intron | 40.0% | |
| ACCTGTCTCCTAATAAATGG+TGG | + | chr1.4:19176224-19176243 | None:intergenic | 40.0% | |
| AGATCTCCATTCAAAGTCAC+AGG | + | chr1.4:19175150-19175169 | None:intergenic | 40.0% | |
| ATAAACAAGCGCCAGAAAGA+AGG | - | chr1.4:19176553-19176572 | MS.gene061089:intron | 40.0% | |
| ATTGACAATAAACACGGGTG+GGG | + | chr1.4:19175988-19176007 | None:intergenic | 40.0% | |
| ATTGTGATTATGCAGGTGGT+TGG | - | chr1.4:19175120-19175139 | MS.gene061089:CDS | 40.0% | |
| CAAATAACATTGTGTCCACC+AGG | + | chr1.4:19174007-19174026 | None:intergenic | 40.0% | |
| CACAGTCAAACTTTGATGGA+AGG | + | chr1.4:19176642-19176661 | None:intergenic | 40.0% | |
| CCACATTTCCACTTGTTTAC+AGG | + | chr1.4:19176841-19176860 | None:intergenic | 40.0% | |
| CCAGAAAGAAGGAACATACA+AGG | - | chr1.4:19176564-19176583 | MS.gene061089:CDS | 40.0% | |
| CCTGTAAACAAGTGGAAATG+TGG | - | chr1.4:19176838-19176857 | MS.gene061089:intron | 40.0% | |
| CCTTGTATGTTCCTTCTTTC+TGG | + | chr1.4:19176567-19176586 | None:intergenic | 40.0% | |
| CTATTGACAATAAACACGGG+TGG | + | chr1.4:19175990-19176009 | None:intergenic | 40.0% | |
| GACATTAAGAGTGATAGGCT+TGG | + | chr1.4:19177655-19177674 | None:intergenic | 40.0% | |
| GAGACTGTTTGAGAGAACAT+AGG | + | chr1.4:19177336-19177355 | None:intergenic | 40.0% | |
| GGAGTAATCCTTATTCCAGA+GGG | - | chr1.4:19175896-19175915 | MS.gene061089:intron | 40.0% | |
| GGCTCAAAGCATAAACACAT+AGG | + | chr1.4:19177146-19177165 | None:intergenic | 40.0% | |
| GGTTATTGTGATTATGCAGG+TGG | - | chr1.4:19175116-19175135 | MS.gene061089:CDS | 40.0% | |
| TATCAGATCTCAAAAGACCG+GGG | + | chr1.4:19175842-19175861 | None:intergenic | 40.0% | |
| TCAAACCAGCAGCTAGTATA+TGG | + | chr1.4:19176783-19176802 | None:intergenic | 40.0% | |
| TCAAGTTAGTTACAGTTGCC+AGG | + | chr1.4:19176813-19176832 | None:intergenic | 40.0% | |
| TCAATGACAAAAGGCCCATT+TGG | + | chr1.4:19176033-19176052 | None:intergenic | 40.0% | |
| TCTTCCTGGATCTTCATCTA+TGG | - | chr1.4:19174822-19174841 | MS.gene061089:intron | 40.0% | |
| TGAAGATCTGAGAGTTCTCT+GGG | + | chr1.4:19173254-19173273 | None:intergenic | 40.0% | |
| TGCTCTGTTCAGGTAATTCT+TGG | - | chr1.4:19175670-19175689 | MS.gene061089:intron | 40.0% | |
| TGGAACGCGAGAAAATTGAT+TGG | + | chr1.4:19174233-19174252 | None:intergenic | 40.0% | |
| TGGAGTAATCCTTATTCCAG+AGG | - | chr1.4:19175895-19175914 | MS.gene061089:intron | 40.0% | |
| TGTTCAGGTAATTCTTGGTG+AGG | - | chr1.4:19175675-19175694 | MS.gene061089:intron | 40.0% | |
| TGTTGCAAAATGCCCTACAA+AGG | - | chr1.4:19174946-19174965 | MS.gene061089:intron | 40.0% | |
| TTCGTGCATGTTAGGAATCA+TGG | + | chr1.4:19174368-19174387 | None:intergenic | 40.0% | |
| TTGAAGATCTGAGAGTTCTC+TGG | + | chr1.4:19173255-19173274 | None:intergenic | 40.0% | |
| TTGACTTTGATGAAATGGGG+TGG | - | chr1.4:19173567-19173586 | MS.gene061089:intron | 40.0% | |
| TTTCTCGTTGTTGCTAGGTA+CGG | - | chr1.4:19178149-19178168 | MS.gene061089:intron | 40.0% | |
| ! | AAGCTATCTTGGAGCACTTA+TGG | - | chr1.4:19177267-19177286 | MS.gene061089:intron | 40.0% |
| ! | ATGCTCCTTTTCCTTTCTTC+AGG | - | chr1.4:19174503-19174522 | MS.gene061089:intron | 40.0% |
| ! | CGATGTATGTTGTTGATTGC+AGG | - | chr1.4:19177541-19177560 | MS.gene061089:intron | 40.0% |
| ! | CGGAAAATTTTGCTAACCCA+TGG | - | chr1.4:19174389-19174408 | MS.gene061089:intron | 40.0% |
| ! | CTGGTGGACACAATGTTATT+TGG | - | chr1.4:19174005-19174024 | MS.gene061089:intron | 40.0% |
| ! | GGAAAAACCTTTTGCATCTC+AGG | - | chr1.4:19176109-19176128 | MS.gene061089:CDS | 40.0% |
| ! | GGTGGACACAATGTTATTTG+GGG | - | chr1.4:19174007-19174026 | MS.gene061089:intron | 40.0% |
| ! | GTTAGGGTTGAATTTGGTGA+TGG | - | chr1.4:19173699-19173718 | MS.gene061089:intron | 40.0% |
| ! | TCCTTTTCCTTTCTTCAGGT+GGG | - | chr1.4:19174507-19174526 | MS.gene061089:intron | 40.0% |
| ! | TGAAGTGTATGCGCTTTTGA+AGG | - | chr1.4:19175937-19175956 | MS.gene061089:CDS | 40.0% |
| ! | TTCAAAAGCGCATACACTTC+AGG | + | chr1.4:19175938-19175957 | None:intergenic | 40.0% |
| ! | TTTATGCTTTGAGCCCTGTT+TGG | - | chr1.4:19177151-19177170 | MS.gene061089:intron | 40.0% |
| !! | AAATGGGGTGGACTTGTTTT+TGG | - | chr1.4:19173435-19173454 | MS.gene061089:intron | 40.0% |
| !! | AGCAGCATTAACTTGTTCAG+TGG | + | chr1.4:19174746-19174765 | None:intergenic | 40.0% |
| !! | ATACTAGCTGCTGGTTTGAA+TGG | - | chr1.4:19176784-19176803 | MS.gene061089:CDS | 40.0% |
| !! | CATGTGCACAAGTTGTTTTC+AGG | + | chr1.4:19177299-19177318 | None:intergenic | 40.0% |
| !! | GAAACTTCTAGCTTACCTTG+TGG | - | chr1.4:19176522-19176541 | MS.gene061089:intron | 40.0% |
| !! | GAGATTGGTGGTGATGAATT+TGG | - | chr1.4:19173629-19173648 | MS.gene061089:intron | 40.0% |
| !! | TAACCTAATAGGAGGGTGTT+CGG | + | chr1.4:19173847-19173866 | None:intergenic | 40.0% |
| !! | TTACTCAGACAAGGTGTTGA+TGG | - | chr1.4:19176143-19176162 | MS.gene061089:intron | 40.0% |
| !! | TTTTCTGGAAGACAATCTCC+TGG | - | chr1.4:19173986-19174005 | MS.gene061089:intron | 40.0% |
| AAGTGTGCATGTTATCAGCG+AGG | + | chr1.4:19177468-19177487 | None:intergenic | 45.0% | |
| AATCCTGGAGCCACATCAAT+CGG | - | chr1.4:19177046-19177065 | MS.gene061089:intron | 45.0% | |
| ACCCACCTGAAGAAAGGAAA+AGG | + | chr1.4:19174511-19174530 | None:intergenic | 45.0% | |
| AGCGAGGAAAAACGCAAGTA+TGG | + | chr1.4:19177452-19177471 | None:intergenic | 45.0% | |
| AGCTAGTCAGCTTTCACCAT+GGG | - | chr1.4:19176175-19176194 | MS.gene061089:intron | 45.0% | |
| ATAGGAGTTGTCACCCTGAT+AGG | + | chr1.4:19175230-19175249 | None:intergenic | 45.0% | |
| ATGAGCCAAAGGTTGTCCAT+AGG | + | chr1.4:19173781-19173800 | None:intergenic | 45.0% | |
| ATGTGCAGGGAACAACTGTT+AGG | - | chr1.4:19173682-19173701 | MS.gene061089:intron | 45.0% | |
| ATTGATGTGGCTCCAGGATT+AGG | + | chr1.4:19177046-19177065 | None:intergenic | 45.0% | |
| CTTATAGTAGGCTCATCAGC+TGG | + | chr1.4:19173741-19173760 | None:intergenic | 45.0% | |
| GATTCCTAACATGCACGAAC+CGG | - | chr1.4:19174369-19174388 | MS.gene061089:intron | 45.0% | |
| GCCCTAAGAAAATGAGCCAA+AGG | + | chr1.4:19173792-19173811 | None:intergenic | 45.0% | |
| GGCGGACGAAAGATCAAATT+AGG | - | chr1.4:19174719-19174738 | MS.gene061089:CDS | 45.0% | |
| GGGCATACTATTGAGCAAGA+AGG | + | chr1.4:19175967-19175986 | None:intergenic | 45.0% | |
| GGTGTTCCTGTGACTTTGAA+TGG | - | chr1.4:19175141-19175160 | MS.gene061089:intron | 45.0% | |
| GTCGAAGACCAAGACTACAT+GGG | - | chr1.4:19177672-19177691 | MS.gene061089:CDS | 45.0% | |
| GTTCAGGCTAGATCAGAACA+AGG | - | chr1.4:19175754-19175773 | MS.gene061089:CDS | 45.0% | |
| GTTGCCATAGATGAAGATCC+AGG | + | chr1.4:19174829-19174848 | None:intergenic | 45.0% | |
| TAACCGAACACCCTCCTATT+AGG | - | chr1.4:19173841-19173860 | MS.gene061089:CDS | 45.0% | |
| TACGGACCATTGTAAAGCCA+GGG | - | chr1.4:19178167-19178186 | MS.gene061089:intron | 45.0% | |
| TAGCTAGTCAGCTTTCACCA+TGG | - | chr1.4:19176174-19176193 | MS.gene061089:intron | 45.0% | |
| TCAAATCCACAGTAGCTGGA+TGG | + | chr1.4:19177084-19177103 | None:intergenic | 45.0% | |
| TCACAAGTTTCGTTGTCGCA+GGG | - | chr1.4:19173952-19173971 | MS.gene061089:intron | 45.0% | |
| TCAGGTAATTCTTGGTGAGG+AGG | - | chr1.4:19175678-19175697 | MS.gene061089:intron | 45.0% | |
| TCGAATAAAGCAGAAGCCCA+TGG | + | chr1.4:19176194-19176213 | None:intergenic | 45.0% | |
| TCGGTTATGATCTGAGCATC+AGG | + | chr1.4:19173828-19173847 | None:intergenic | 45.0% | |
| TCTTCAGTCCCATCCAAACA+TGG | - | chr1.4:19175567-19175586 | MS.gene061089:CDS | 45.0% | |
| TGACATGGCGGTTAGAACTT+CGG | + | chr1.4:19178242-19178261 | None:intergenic | 45.0% | |
| TGCTACCATATACTAGCTGC+TGG | - | chr1.4:19176775-19176794 | MS.gene061089:CDS | 45.0% | |
| TGTCGAAGACCAAGACTACA+TGG | - | chr1.4:19177671-19177690 | MS.gene061089:CDS | 45.0% | |
| TGTGCAGGGAACAACTGTTA+GGG | - | chr1.4:19173683-19173702 | MS.gene061089:intron | 45.0% | |
| TGTGCTGAGTCATCTGATTC+AGG | + | chr1.4:19176388-19176407 | None:intergenic | 45.0% | |
| TTGACAATAAACACGGGTGG+GGG | + | chr1.4:19175987-19176006 | None:intergenic | 45.0% | |
| ! | AACAAACTTGACTCGAGTCG+AGG | + | chr1.4:19176276-19176295 | None:intergenic | 45.0% |
| ! | CAAGGCATCACATGTTGCAT+TGG | - | chr1.4:19175537-19175556 | MS.gene061089:intron | 45.0% |
| ! | CTCCTTTTCCTTTCTTCAGG+TGG | - | chr1.4:19174506-19174525 | MS.gene061089:intron | 45.0% |
| !! | AAAGCAGCTTTGAGCGTCAT+GGG | - | chr1.4:19178208-19178227 | MS.gene061089:CDS | 45.0% |
| !! | ACTTCAGGAGTACCTTGAAC+AGG | - | chr1.4:19177707-19177726 | MS.gene061089:CDS | 45.0% |
| !! | CAATCAGACCCTCTGGAATA+AGG | + | chr1.4:19175907-19175926 | None:intergenic | 45.0% |
| !! | CTTGATGGCCTTGTCATCAT+TGG | - | chr1.4:19174790-19174809 | MS.gene061089:intron | 45.0% |
| !! | GTGGTTATGATTTGCTTGGG+CGG | - | chr1.4:19174701-19174720 | MS.gene061089:CDS | 45.0% |
| !! | TGCTGGTTTGAATGGATACC+TGG | - | chr1.4:19176792-19176811 | MS.gene061089:CDS | 45.0% |
| !! | TTTTCCGGTTCGTGCATGTT+AGG | + | chr1.4:19174376-19174395 | None:intergenic | 45.0% |
| AAGTTTCGTTGTCGCAGGGT+TGG | - | chr1.4:19173956-19173975 | MS.gene061089:intron | 50.0% | |
| ACCGCCATGTCATCATCTTC+CGG | - | chr1.4:19178250-19178269 | MS.gene061089:CDS | 50.0% | |
| ATCCACAGTAGCTGGATGGA+TGG | + | chr1.4:19177080-19177099 | None:intergenic | 50.0% | |
| ATGCTCTCAATCAGACCCTC+TGG | + | chr1.4:19175914-19175933 | None:intergenic | 50.0% | |
| CAGGACCATCAAACTGAAGC+GGG | + | chr1.4:19177623-19177642 | None:intergenic | 50.0% | |
| CATTCGTCTTATGGGACGCA+AGG | - | chr1.4:19175519-19175538 | MS.gene061089:intron | 50.0% | |
| CCAGCTACTGTGGATTTGAG+AGG | - | chr1.4:19177085-19177104 | MS.gene061089:intron | 50.0% | |
| CCAGGACCATCAAACTGAAG+CGG | + | chr1.4:19177624-19177643 | None:intergenic | 50.0% | |
| CCTCTCAAATCCACAGTAGC+TGG | + | chr1.4:19177088-19177107 | None:intergenic | 50.0% | |
| CTCACAAGTTTCGTTGTCGC+AGG | - | chr1.4:19173951-19173970 | MS.gene061089:intron | 50.0% | |
| CTTCTGACCCACCTGAAGAA+AGG | + | chr1.4:19174517-19174536 | None:intergenic | 50.0% | |
| CTTTCTTCAGGTGGGTCAGA+AGG | - | chr1.4:19174515-19174534 | MS.gene061089:intron | 50.0% | |
| GCAGACATTGCTGATGAGCT+GGG | + | chr1.4:19175378-19175397 | None:intergenic | 50.0% | |
| GGCGGTTAGAACTTCGGTAA+CGG | + | chr1.4:19178236-19178255 | None:intergenic | 50.0% | |
| GTACGGACCATTGTAAAGCC+AGG | - | chr1.4:19178166-19178185 | MS.gene061089:intron | 50.0% | |
| GTTGCCGGAAGATGATGACA+TGG | + | chr1.4:19178257-19178276 | None:intergenic | 50.0% | |
| TCTGGAAGACAATCTCCTGG+TGG | - | chr1.4:19173989-19174008 | MS.gene061089:intron | 50.0% | |
| TGAAGACAAGGAGGGAGTTC+AGG | + | chr1.4:19173299-19173318 | None:intergenic | 50.0% | |
| TGACTCAGCACAGTTGTCTC+AGG | - | chr1.4:19176396-19176415 | MS.gene061089:intron | 50.0% | |
| TGATGCGACCCATGTAGTCT+TGG | + | chr1.4:19177683-19177702 | None:intergenic | 50.0% | |
| TGATGCTCTCTCTGCAGAGA+AGG | - | chr1.4:19175400-19175419 | MS.gene061089:intron | 50.0% | |
| TGCAGACATTGCTGATGAGC+TGG | + | chr1.4:19175379-19175398 | None:intergenic | 50.0% | |
| TTTCCGATTGATGTGGCTCC+AGG | + | chr1.4:19177052-19177071 | None:intergenic | 50.0% | |
| ! | GCTGCTTTCAGAACCTCTTG+AGG | + | chr1.4:19178196-19178215 | None:intergenic | 50.0% |
| ! | GGCAGGTTTTCCGATTGATG+TGG | + | chr1.4:19177059-19177078 | None:intergenic | 50.0% |
| !! | AAGCAGCTTTGAGCGTCATG+GGG | - | chr1.4:19178209-19178228 | MS.gene061089:CDS | 50.0% |
| !! | AAGCGTTGGTCTCCTAATCC+TGG | - | chr1.4:19177031-19177050 | MS.gene061089:intron | 50.0% |
| !! | AGGACACCCTGGCTTTACAA+TGG | + | chr1.4:19178176-19178195 | None:intergenic | 50.0% |
| !! | CTATGATGACGGTGAAGCGT+TGG | - | chr1.4:19177017-19177036 | MS.gene061089:intron | 50.0% |
| !! | GAAAGCAGCTTTGAGCGTCA+TGG | - | chr1.4:19178207-19178226 | MS.gene061089:CDS | 50.0% |
| !! | GATGGCCTTGTCATCATTGG+AGG | - | chr1.4:19174793-19174812 | MS.gene061089:intron | 50.0% |
| !! | TCAGAGGGATGAAGTGTTGC+CGG | + | chr1.4:19178272-19178291 | None:intergenic | 50.0% |
| ACAGTAGCTGGATGGATGGC+AGG | + | chr1.4:19177076-19177095 | None:intergenic | 55.0% | |
| AGAACCTCTTGAGGACACCC+TGG | + | chr1.4:19178187-19178206 | None:intergenic | 55.0% | |
| ATAGGCTTGGCATCTGCACC+AGG | + | chr1.4:19177642-19177661 | None:intergenic | 55.0% | |
| GACAAGGAGGGAGTTCAGGT+TGG | + | chr1.4:19173295-19173314 | None:intergenic | 55.0% | |
| GCCGGAAGATGATGACATGG+CGG | + | chr1.4:19178254-19178273 | None:intergenic | 55.0% | |
| GGGTCGCATCAAGAGACTTC+AGG | - | chr1.4:19177692-19177711 | MS.gene061089:CDS | 55.0% | |
| TGCCATCCATCCAGCTACTG+TGG | - | chr1.4:19177075-19177094 | MS.gene061089:intron | 55.0% | |
| ! | AAAGCCAGGGTGTCCTCAAG+AGG | - | chr1.4:19178180-19178199 | MS.gene061089:intron | 55.0% |
| ! | CCGCTTCAGTTTGATGGTCC+TGG | - | chr1.4:19177621-19177640 | MS.gene061089:intron | 55.0% |
| CCAGGCCCGCTTCAGTTTGA+TGG | - | chr1.4:19177615-19177634 | MS.gene061089:intron | 60.0% | |
| CCATCAAACTGAAGCGGGCC+TGG | + | chr1.4:19177618-19177637 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 19173230 | 19178291 | 19173230 | ID=MS.gene061089 |
| chr1.4 | mRNA | 19173230 | 19178291 | 19173230 | ID=MS.gene061089.t1;Parent=MS.gene061089 |
| chr1.4 | exon | 19178202 | 19178291 | 19178202 | ID=MS.gene061089.t1.exon1;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19178202 | 19178291 | 19178202 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19177659 | 19177831 | 19177659 | ID=MS.gene061089.t1.exon2;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19177659 | 19177831 | 19177659 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19177436 | 19177548 | 19177436 | ID=MS.gene061089.t1.exon3;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19177436 | 19177548 | 19177436 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19176922 | 19176996 | 19176922 | ID=MS.gene061089.t1.exon4;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19176922 | 19176996 | 19176922 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19176707 | 19176820 | 19176707 | ID=MS.gene061089.t1.exon5;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19176707 | 19176820 | 19176707 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19176554 | 19176621 | 19176554 | ID=MS.gene061089.t1.exon6;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19176554 | 19176621 | 19176554 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19176303 | 19176386 | 19176303 | ID=MS.gene061089.t1.exon7;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19176303 | 19176386 | 19176303 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19176100 | 19176153 | 19176100 | ID=MS.gene061089.t1.exon8;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19176100 | 19176153 | 19176100 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19175933 | 19176013 | 19175933 | ID=MS.gene061089.t1.exon9;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19175933 | 19176013 | 19175933 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19175746 | 19175839 | 19175746 | ID=MS.gene061089.t1.exon10;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19175746 | 19175839 | 19175746 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19175563 | 19175636 | 19175563 | ID=MS.gene061089.t1.exon11;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19175563 | 19175636 | 19175563 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19175280 | 19175390 | 19175280 | ID=MS.gene061089.t1.exon12;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19175280 | 19175390 | 19175280 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19175104 | 19175148 | 19175104 | ID=MS.gene061089.t1.exon13;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19175104 | 19175148 | 19175104 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19174975 | 19175010 | 19174975 | ID=MS.gene061089.t1.exon14;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19174975 | 19175010 | 19174975 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19174849 | 19174935 | 19174849 | ID=MS.gene061089.t1.exon15;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19174849 | 19174935 | 19174849 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19174645 | 19174761 | 19174645 | ID=MS.gene061089.t1.exon16;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19174645 | 19174761 | 19174645 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19174402 | 19174505 | 19174402 | ID=MS.gene061089.t1.exon17;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19174402 | 19174505 | 19174402 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19173793 | 19173958 | 19173793 | ID=MS.gene061089.t1.exon18;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19173793 | 19173958 | 19173793 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| chr1.4 | exon | 19173230 | 19173355 | 19173230 | ID=MS.gene061089.t1.exon19;Parent=MS.gene061089.t1 |
| chr1.4 | CDS | 19173230 | 19173355 | 19173230 | ID=cds.MS.gene061089.t1;Parent=MS.gene061089.t1 |
| Gene Sequence |
| Protein sequence |
