AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90136

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90136.t1 MTR_2g081100 99.013 709 6 1 1 708 1 709 0.0 1452
MS.gene90136.t1 MTR_2g081100 99.142 699 5 1 1 698 1 699 0.0 1431
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90136.t1 AT5G54260 74.095 718 165 8 7 708 8 720 0.0 1055
MS.gene90136.t1 AT5G54260 74.095 718 165 8 7 708 12 724 0.0 1055

Find 164 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTTGATTTAATTCTTC+TGG 0.168024 2.3:-17337879 None:intergenic
ACCTGCACCCTTCTCCAATT+TGG 0.198759 2.3:-17337110 None:intergenic
AGAGGAAGGGGCAGGGGTAG+GGG 0.205151 2.3:+17339781 MS.gene90136:CDS
GCCAAAACATGTGCTTCTTT+TGG 0.222447 2.3:+17334855 MS.gene90136:CDS
CATTGTTCATGAGCATTCTA+TGG 0.226787 2.3:-17340727 None:intergenic
TTCTGATTGGTTCAACATTC+TGG 0.230665 2.3:+17334371 MS.gene90136:CDS
ACAACCCTTGATGGATCTTT+AGG 0.232986 2.3:+17339835 MS.gene90136:CDS
TGTGAACAAGGATGATAAAA+TGG 0.237387 2.3:+17338769 MS.gene90136:CDS
ACTATAAATCCTCAAAGATT+TGG 0.257048 2.3:+17336937 MS.gene90136:CDS
AGGGGCAGGGGTAGGGGAAG+AGG 0.277806 2.3:+17339787 MS.gene90136:CDS
CTCTTCCACTGCATTTCCTT+TGG 0.279643 2.3:-17340410 None:intergenic
TCACACCCTTCCTGAGATTC+AGG 0.293271 2.3:-17334345 None:intergenic
TTGCCTGTGTTTACTATTCA+TGG 0.297575 2.3:+17332020 MS.gene90136:CDS
CAACCCTTGATGGATCTTTA+GGG 0.299655 2.3:+17339836 MS.gene90136:CDS
AGTGACAATCGGTTGCTATT+AGG 0.302568 2.3:-17330984 None:intergenic
TCCAAAAGAAGCACATGTTT+TGG 0.306348 2.3:-17334856 None:intergenic
AAGAGGAAGGGGCAGGGGTA+GGG 0.314205 2.3:+17339780 MS.gene90136:CDS
GAAGAGGAAGGGGCAGGGGT+AGG 0.327346 2.3:+17339779 MS.gene90136:CDS
GAAGCTTAAGTTCTGCTCTT+TGG 0.327549 2.3:-17336515 None:intergenic
GATACTTCCAGTCAATGATT+TGG 0.332660 2.3:+17338727 MS.gene90136:CDS
TCCATGAAAATAAACCTTCT+AGG 0.339465 2.3:+17331124 MS.gene90136:CDS
AAGAATAGAATTCTGATCAT+TGG 0.350618 2.3:-17336137 None:intergenic
CAAACCTTCTTTATGAGAAT+AGG 0.360176 2.3:-17334021 None:intergenic
TTAGAGATGAAAGACTTAAT+AGG 0.367594 2.3:+17334193 MS.gene90136:CDS
TTTGGTTGCTGAAAATAATC+TGG 0.367878 2.3:+17337911 MS.gene90136:CDS
AAAGGCCGGACAGATGTTAA+AGG 0.377556 2.3:-17335012 None:intergenic
TGCTGATGATGGGGATAATA+TGG 0.379550 2.3:+17340372 MS.gene90136:CDS
TCAACAGCTGTAGCTCTATA+TGG 0.380069 2.3:+17334159 MS.gene90136:CDS
TTGAAGCAGACAACCCTTGA+TGG 0.381794 2.3:+17339826 MS.gene90136:CDS
CCTTTCCGACCTCTGGTGCT+TGG 0.384030 2.3:-17339727 None:intergenic
CGATTGTCACTTAGGTTACA+TGG 0.387245 2.3:+17330996 MS.gene90136:CDS
AAAATATAAGAATGTCTTGC+GGG 0.387706 2.3:-17337078 None:intergenic
TCAACAGAACATAGAGGCTT+TGG 0.390185 2.3:+17337893 MS.gene90136:CDS
CCAATCTACCGGCACGGAAA+AGG 0.391398 2.3:+17340630 MS.gene90136:CDS
AGAGGAAGAGGAAGGGGCAG+GGG 0.392525 2.3:+17339775 MS.gene90136:CDS
CTATAAATCCTCAAAGATTT+GGG 0.392946 2.3:+17336938 MS.gene90136:CDS
TGCTACACAGTCTTCTAAAC+GGG 0.396941 2.3:+17340679 MS.gene90136:CDS
TGATCATTGGAATCAATATC+AGG 0.400641 2.3:-17336124 None:intergenic
TTGACTAAAGTTGACCTAGA+AGG 0.403926 2.3:-17331138 None:intergenic
TCCTGGTGCTCAGTCCTTTG+AGG 0.403956 2.3:+17339488 MS.gene90136:CDS
TTCTGGTACTTCATCAGAAC+AGG 0.405240 2.3:+17334388 MS.gene90136:CDS
TATTTCTGCCCAAATCTTTG+AGG 0.412142 2.3:-17336946 None:intergenic
GAAGATTTAGTTGTTAAAGT+TGG 0.415634 2.3:+17339072 MS.gene90136:CDS
GCTTTCTAGACTTCATTGTA+TGG 0.416041 2.3:+17334636 MS.gene90136:CDS
GATGTTAAAGGTATCTTAGT+AGG 0.418928 2.3:-17335000 None:intergenic
CCAGAGGAAGAGGAAGGGGC+AGG 0.421527 2.3:+17339773 MS.gene90136:CDS
AACAGATCCTTTCCGACCTC+TGG 0.421775 2.3:-17339734 None:intergenic
GCTGTAGCTCTATATGGCCT+TGG 0.422931 2.3:+17334165 MS.gene90136:CDS
ACGGAAAAGGGCTGCTCCAA+GGG 0.426090 2.3:+17340643 MS.gene90136:CDS
CCTGCCCCTTCCTCTTCCTC+TGG 0.426566 2.3:-17339773 None:intergenic
GGTTGTCTGCTTCAAGGTGC+TGG 0.429348 2.3:-17339818 None:intergenic
CGAATGTTTGGTTGACCCTC+AGG 0.434408 2.3:+17334670 MS.gene90136:CDS
CCCCATCATCAGCACCACTT+TGG 0.435286 2.3:-17340363 None:intergenic
CTTTCTAGACTTCATTGTAT+GGG 0.443749 2.3:+17334637 MS.gene90136:CDS
ACCTCAAAGGACTGAGCACC+AGG 0.444661 2.3:-17339489 None:intergenic
CAATCTACCGGCACGGAAAA+GGG 0.446890 2.3:+17340631 MS.gene90136:CDS
ATCAAGGGTTGTCTGCTTCA+AGG 0.448531 2.3:-17339824 None:intergenic
GGGGCATGAGCACGAATGTT+TGG 0.455683 2.3:+17334658 MS.gene90136:CDS
TTCATTTGTAGGCAAAATTG+AGG 0.455831 2.3:+17337839 MS.gene90136:intron
TGTAATCTAGTCAACTACTT+TGG 0.456124 2.3:+17333952 MS.gene90136:CDS
TCCAAATTGGAGAAGGGTGC+AGG 0.460729 2.3:+17337109 MS.gene90136:CDS
GTGCTACACAGTCTTCTAAA+CGG 0.463803 2.3:+17340678 MS.gene90136:CDS
ATAGCAACCGATTGTCACTT+AGG 0.464852 2.3:+17330988 MS.gene90136:CDS
TGATCGCTAACAACTTGAAA+AGG 0.466142 2.3:-17331207 None:intergenic
GAAGATCCGCATTTCAATGT+TGG 0.469646 2.3:+17331996 MS.gene90136:CDS
CAGAGGAAGAGGAAGGGGCA+GGG 0.469663 2.3:+17339774 MS.gene90136:CDS
ATTAAATACGTCTCAACCTC+GGG 0.469977 2.3:+17340787 MS.gene90136:CDS
CTTCAGGAAGTTCCAGGGAT+GGG 0.477205 2.3:+17334772 MS.gene90136:intron
CAATCCTATTCTCATAAAGA+AGG 0.478266 2.3:+17334017 MS.gene90136:CDS
CACGGAAAAGGGCTGCTCCA+AGG 0.482529 2.3:+17340642 MS.gene90136:CDS
TTTGTTCTAGGAACGTGTTA+AGG 0.483769 2.3:+17339428 MS.gene90136:intron
AAGGGTGTGAAGTTTCTGAT+TGG 0.487928 2.3:+17334358 MS.gene90136:CDS
GCTCCAAGGGGAAGAGGTAG+AGG 0.491942 2.3:+17340656 MS.gene90136:CDS
AGTGAACTGTGAAGAGTCCT+TGG 0.492921 2.3:-17339466 None:intergenic
CTGTAGCTCTATATGGCCTT+GGG 0.495853 2.3:+17334166 MS.gene90136:CDS
GTGGATGCGACCTGAATCTC+AGG 0.496097 2.3:+17334335 MS.gene90136:CDS
CTAACAACTTGAAAAGGAAC+AGG 0.502105 2.3:-17331201 None:intergenic
ATCATCAGCACCACTTTGGA+TGG 0.502758 2.3:-17340359 None:intergenic
TTTCAAGGCAGAAGTGCAGC+TGG 0.505124 2.3:+17339643 MS.gene90136:CDS
ATCCAAAGTGGTGCTGATGA+TGG 0.506619 2.3:+17340361 MS.gene90136:CDS
AAATCTTCCACATCAAGCTT+CGG 0.507268 2.3:-17339057 None:intergenic
GCACCTCTACCTCTTCCCCT+TGG 0.512047 2.3:-17340659 None:intergenic
CAAATGCTTGAAACGAATCA+TGG 0.512507 2.3:-17331038 None:intergenic
GACTCTTCACAGTTCACTCC+TGG 0.513011 2.3:+17339471 MS.gene90136:CDS
GGAAGAGATTGATGACAGTT+CGG 0.518448 2.3:+17340426 MS.gene90136:CDS
GCAATATCCAAATCATTGAC+TGG 0.521490 2.3:-17338734 None:intergenic
CAAACTACAACCAGAGGAAG+AGG 0.527115 2.3:+17339763 MS.gene90136:CDS
TAAAGTTGGAGAATGCTTTG+AGG 0.530060 2.3:+17339086 MS.gene90136:CDS
GAAATATGAAATCCCATCCC+TGG 0.533117 2.3:-17334784 None:intergenic
CATGTAACCTAAGTGACAAT+CGG 0.533487 2.3:-17330995 None:intergenic
CAGGGGTAGGGGAAGAGGCA+AGG 0.534037 2.3:+17339792 MS.gene90136:CDS
ACAACCAGAGGAAGAGGAAG+GGG 0.535346 2.3:+17339769 MS.gene90136:CDS
AAAGGCATCCAAATTGGAGA+AGG 0.535738 2.3:+17337102 MS.gene90136:CDS
TAGGGTTTCGCCCTTCTCAA+AGG 0.536745 2.3:+17339854 MS.gene90136:CDS
AGCAAATGCAACCTTTGAGA+AGG 0.537592 2.3:-17339865 None:intergenic
TGAAGTCTAGAAAGCGTGGC+AGG 0.538720 2.3:-17334628 None:intergenic
TTTCTAGACTTCATTGTATG+GGG 0.538921 2.3:+17334638 MS.gene90136:CDS
AGGGCTGCTCCAAGGGGAAG+AGG 0.539837 2.3:+17340650 MS.gene90136:CDS
TCCAAAGTGGTGCTGATGAT+GGG 0.545752 2.3:+17340362 MS.gene90136:CDS
TGCGCAGAACAAAATTGCTA+AGG 0.546432 2.3:+17339023 MS.gene90136:intron
GCTTCCACTAGTACGTATCA+AGG 0.548376 2.3:+17336533 MS.gene90136:CDS
GATGTTGCAACCGACGATCC+TGG 0.552775 2.3:-17334811 None:intergenic
AGATTTGGGCAGAAATATGT+AGG 0.554436 2.3:+17336952 MS.gene90136:CDS
CGCATCCACTGCACAGCATG+TGG 0.557059 2.3:-17334321 None:intergenic
GAAACCCTAAAGATCCATCA+AGG 0.558816 2.3:-17339840 None:intergenic
TGAAGAAATTTGCTCAATAG+CGG 0.559616 2.3:+17331059 MS.gene90136:CDS
ATGTTAAAGGTATCTTAGTA+GGG 0.562457 2.3:-17334999 None:intergenic
AGATACCTTTAACATCTGTC+CGG 0.562560 2.3:+17335007 MS.gene90136:CDS
TCTTGAACATCTTGACAAAG+TGG 0.563668 2.3:+17336156 MS.gene90136:CDS
GCAAATGCAACCTTTGAGAA+GGG 0.569265 2.3:-17339864 None:intergenic
GGCATCTTCATCATCGCTGA+AGG 0.569407 2.3:-17339683 None:intergenic
GGAAATCATGATGATCCTGC+TGG 0.569997 2.3:+17332041 MS.gene90136:CDS
GGATTTCATATTTCACAACC+AGG 0.572759 2.3:+17334793 MS.gene90136:CDS
CGGAAAAGGGCTGCTCCAAG+GGG 0.574619 2.3:+17340644 MS.gene90136:CDS
TTCTAGACTTCATTGTATGG+GGG 0.576652 2.3:+17334639 MS.gene90136:CDS
GATTAAATACGTCTCAACCT+CGG 0.577464 2.3:+17340786 MS.gene90136:CDS
GGAACGATCCACACGCTCCA+AGG 0.577499 2.3:+17339449 MS.gene90136:CDS
TCTTCAGGAAGTTCCAGGGA+TGG 0.578864 2.3:+17334771 MS.gene90136:intron
CCAAGCACCAGAGGTCGGAA+AGG 0.579149 2.3:+17339727 MS.gene90136:CDS
TGGGCAGAAATATGTAGGAA+AGG 0.579944 2.3:+17336957 MS.gene90136:CDS
GGACAATGAATCCAATCTAC+CGG 0.580873 2.3:+17340619 MS.gene90136:intron
ATGACACATACCACTCCAGC+AGG 0.583755 2.3:-17332056 None:intergenic
TTTCATCTCTAATGTTCCCA+AGG 0.584085 2.3:-17334182 None:intergenic
CTACAACCAGAGGAAGAGGA+AGG 0.586751 2.3:+17339767 MS.gene90136:CDS
GAAAATATAAGAATGTCTTG+CGG 0.587904 2.3:-17337079 None:intergenic
ATTTGTTGGATTTACCTCAA+AGG 0.592825 2.3:-17339502 None:intergenic
TACAACCAGAGGAAGAGGAA+GGG 0.594910 2.3:+17339768 MS.gene90136:CDS
TGCTGAGAGAATATCAACTA+CGG 0.595254 2.3:-17333929 None:intergenic
CATGTCGATTTCATGCTACT+CGG 0.597381 2.3:+17331090 MS.gene90136:CDS
ATTAAATCAACAGAACATAG+AGG 0.602192 2.3:+17337887 MS.gene90136:CDS
TGAAGAGTCCTTGGAGCGTG+TGG 0.603569 2.3:-17339457 None:intergenic
TATTTCACAACCAGGATCGT+CGG 0.604266 2.3:+17334801 MS.gene90136:CDS
CCTCTGTATACTCGAAAGGC+CGG 0.606355 2.3:-17335026 None:intergenic
TGCGACCTGAATCTCAGGAA+GGG 0.609434 2.3:+17334340 MS.gene90136:CDS
AGCTCAAAACCAAGCACCAG+AGG 0.612912 2.3:+17339718 MS.gene90136:CDS
AAATGAGCCGAAGCTTGATG+TGG 0.621857 2.3:+17339050 MS.gene90136:CDS
GTTGCAACATCACTTATCGA+TGG 0.625758 2.3:+17334823 MS.gene90136:CDS
TCATGATGATCCTGCTGGAG+TGG 0.625967 2.3:+17332046 MS.gene90136:CDS
AGAGAATATCAACTACGGAA+AGG 0.631891 2.3:-17333924 None:intergenic
CTGACCTCTGTATACTCGAA+AGG 0.633276 2.3:-17335030 None:intergenic
AAGGCATCCAAATTGGAGAA+GGG 0.633969 2.3:+17337103 MS.gene90136:CDS
CAAAACCAAGCACCAGAGGT+CGG 0.635046 2.3:+17339722 MS.gene90136:CDS
ATGCGACCTGAATCTCAGGA+AGG 0.635988 2.3:+17334339 MS.gene90136:CDS
ATTACCTTGATACGTACTAG+TGG 0.637391 2.3:-17336537 None:intergenic
ATGAATCCAATCTACCGGCA+CGG 0.638112 2.3:+17340624 MS.gene90136:CDS
GCAGCAACTTCCATCCAAAG+TGG 0.643383 2.3:+17340349 MS.gene90136:CDS
AGACGCCACATGCTGTGCAG+TGG 0.645348 2.3:+17334316 MS.gene90136:intron
TGCAGCTGGAGCTGATAGTG+CGG 0.647636 2.3:+17339657 MS.gene90136:CDS
GCTTCAAGTGACGATGCCAA+AGG 0.650911 2.3:+17340394 MS.gene90136:CDS
AGTACAATATTGATGAAACA+CGG 0.651026 2.3:+17338810 MS.gene90136:CDS
GTACAATATTGATGAAACAC+GGG 0.651638 2.3:+17338811 MS.gene90136:CDS
CCAAAGTGGTGCTGATGATG+GGG 0.653522 2.3:+17340363 MS.gene90136:CDS
ACAATGAAGTCTAGAAAGCG+TGG 0.653525 2.3:-17334632 None:intergenic
CGATGCCAAAGGAAATGCAG+TGG 0.653686 2.3:+17340405 MS.gene90136:CDS
TTTCCATGAATAGTAAACAC+AGG 0.658477 2.3:-17332023 None:intergenic
GTCGATTTCATGCTACTCGG+TGG 0.665649 2.3:+17331093 MS.gene90136:CDS
GGCAAACCAACATTGAAATG+CGG 0.666565 2.3:-17332002 None:intergenic
GCATCTCAAACTACAACCAG+AGG 0.674182 2.3:+17339757 MS.gene90136:CDS
AAACCCTAAAGATCCATCAA+GGG 0.678157 2.3:-17339839 None:intergenic
GCAAAATTGAGGATTCAGAA+CGG 0.680935 2.3:+17337850 MS.gene90136:CDS
TTAAAGGTATCTTAGTAGGG+CGG 0.695776 2.3:-17334996 None:intergenic
GCTACACAGTCTTCTAAACG+GGG 0.703226 2.3:+17340680 MS.gene90136:CDS
CCGGCCTTTCGAGTATACAG+AGG 0.728303 2.3:+17335026 MS.gene90136:CDS
CTACACAGTCTTCTAAACGG+GGG 0.738244 2.3:+17340681 MS.gene90136:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.3 gene 17330952 17341548 17330952 ID=MS.gene90136
chr2.3 mRNA 17330952 17341548 17330952 ID=MS.gene90136.t1;Parent=MS.gene90136
chr2.3 exon 17330952 17331250 17330952 ID=MS.gene90136.t1.exon1;Parent=MS.gene90136.t1
chr2.3 CDS 17330952 17331250 17330952 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17331977 17332067 17331977 ID=MS.gene90136.t1.exon2;Parent=MS.gene90136.t1
chr2.3 CDS 17331977 17332067 17331977 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17333919 17334038 17333919 ID=MS.gene90136.t1.exon3;Parent=MS.gene90136.t1
chr2.3 CDS 17333919 17334038 17333919 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17334156 17334224 17334156 ID=MS.gene90136.t1.exon4;Parent=MS.gene90136.t1
chr2.3 CDS 17334156 17334224 17334156 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17334318 17334409 17334318 ID=MS.gene90136.t1.exon5;Parent=MS.gene90136.t1
chr2.3 CDS 17334318 17334409 17334318 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17334589 17334691 17334589 ID=MS.gene90136.t1.exon6;Parent=MS.gene90136.t1
chr2.3 CDS 17334589 17334691 17334589 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17334778 17334885 17334778 ID=MS.gene90136.t1.exon7;Parent=MS.gene90136.t1
chr2.3 CDS 17334778 17334885 17334778 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17334985 17335047 17334985 ID=MS.gene90136.t1.exon8;Parent=MS.gene90136.t1
chr2.3 CDS 17334985 17335047 17334985 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17336106 17336177 17336106 ID=MS.gene90136.t1.exon9;Parent=MS.gene90136.t1
chr2.3 CDS 17336106 17336177 17336106 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17336477 17336554 17336477 ID=MS.gene90136.t1.exon10;Parent=MS.gene90136.t1
chr2.3 CDS 17336477 17336554 17336477 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17336916 17336978 17336916 ID=MS.gene90136.t1.exon11;Parent=MS.gene90136.t1
chr2.3 CDS 17336916 17336978 17336916 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17337070 17337130 17337070 ID=MS.gene90136.t1.exon12;Parent=MS.gene90136.t1
chr2.3 CDS 17337070 17337130 17337070 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17337850 17337932 17337850 ID=MS.gene90136.t1.exon13;Parent=MS.gene90136.t1
chr2.3 CDS 17337850 17337932 17337850 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17338719 17338832 17338719 ID=MS.gene90136.t1.exon14;Parent=MS.gene90136.t1
chr2.3 CDS 17338719 17338832 17338719 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17339030 17339107 17339030 ID=MS.gene90136.t1.exon15;Parent=MS.gene90136.t1
chr2.3 CDS 17339030 17339107 17339030 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17339438 17339509 17339438 ID=MS.gene90136.t1.exon16;Parent=MS.gene90136.t1
chr2.3 CDS 17339438 17339509 17339438 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17339640 17339875 17339640 ID=MS.gene90136.t1.exon17;Parent=MS.gene90136.t1
chr2.3 CDS 17339640 17339875 17339640 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17340345 17340447 17340345 ID=MS.gene90136.t1.exon18;Parent=MS.gene90136.t1
chr2.3 CDS 17340345 17340447 17340345 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17340620 17340808 17340620 ID=MS.gene90136.t1.exon19;Parent=MS.gene90136.t1
chr2.3 CDS 17340620 17340808 17340620 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
chr2.3 exon 17341516 17341548 17341516 ID=MS.gene90136.t1.exon20;Parent=MS.gene90136.t1
chr2.3 CDS 17341516 17341548 17341516 ID=cds.MS.gene90136.t1;Parent=MS.gene90136.t1
Gene Sequence

>MS.gene90136

ATGGCGGACGCTGAAGAAAACACGCTTCGAATCCTAATAGCAACCGATTGTCACTTAGGTTACATGGAGAAAGACGAAGTTCGACGCCATGATTCGTTTCAAGCATTTGAAGAAATTTGCTCAATAGCGGAAAAGAAGCATGTCGATTTCATGCTACTCGGTGGTGACCTCTTCCATGAAAATAAACCTTCTAGGTCAACTTTAGTCAAAGCTATTGAGATTCTAAGAAGATACTGTCTCAATGATCGTCCTGTTCCTTTTCAAGTTGTTAGCGATCAAACTCTCAATTTTCAGAACACGTTCGTTTCTTACACTCTCATTCTTCTTCTTTTTTTGTTTTTCTTATAGTTTCTTTATATTATCTTGTGAATTTAATGACTATGAAAAATACTAGTAGTTGTTATATTCATTAATTGACATGCAACACATCATTGGATGCATGTGTAAAATACTTTTGCACTGTCAGTGTATGTATAGTTATTTAACTCTAATGTTGTGTACTAAATGATGATTTTGATGGTTATTATGTGTTATAGTTAGTGAATGTTAAGTTGCAACGTAGTAGAGACACTTCTGATTGAAGACGTGTCTGACATGTGGACGTGTCTGACACCACTGACACATGCAATTATATTCAATTATATCATTTGCTAAAATTATTACCGGACATGTCAGTGTCGTGTCCATTGCCTGTGCAATTATAACGTTTTTTTTAGGTCGTTGCAAATAAAAAAATGTTGCTTTTCGTGTCCTAACTCCTAACATCGTATGTGACCCAATAAAATCATGCCATTTGGTCCAATAAATTGACGTCATGGACTAAAAGCAAACCGTTTTTGAACTTGTAGGATATCGAGTCGAAAAAACTTACAGGTATTAAAACCAAAAAAACGCTATAAACACTGGGACTAAAATCATATGTAAACCTTTTTGATATTCTATTGTTTACTAAATAATGACGACTTTTGTGGTTTTTATGTGTGATTAGTTAGTGAATGTTATGTTGTGGAATTTTTTTTTTACAGGTTTGGTCATGTAAATTATGAAGATCCGCATTTCAATGTTGGTTTGCCTGTGTTTACTATTCATGGAAATCATGATGATCCTGCTGGAGTGGTATGTGTCATGTGCATCTTTGATATTGTTGTTTGTTATATCTGTAGTGTTTGATTGGTCTTTTTTGTTTTGCTAAATGGTTGTCGTGTTTACTTGTGTCACTAACTTAGGACCTGTTTGGATTGACTTATTTGAGCTTATTTACTGTCATAATCATTTGTTAGCTGTTTGAAAGATTTATAAAAACGACATAATGAGACAGTATATAGTTTATATGAAATCAATTTAATTTAATTTTATATTATGTTTTAGAAATAACTTACAGACAAGCACTTGATGAAGATGTTTATCCAAACAAGGCCTTACATAGTTGGTGCTAATCAACTTCGTTATCAGTGGAGTCTTTGTATTAGGATATAGACTTTGGCTTCTGCAAGGTGAGGGGTTCACTTTAGATGGGTAAATTGTGGAGTTATAACCAGTTTATTTGAAAATTGAAGCTTTATATTTGAAGTTTTAGCAATGTCGTAGTTTGTTATTCGCATGTATGCATTTGGTCATAATTCAATTAGTGGTTATAACTTTACACCTCATAGTACACTACTTAGTTCACTTTAGAGGAGACAAATCGCTATAACTTGTTCAGGGTATATGTAAATAAATCCAACGAGCTTGAGTTGGTTTGTTCTTTCCTTTATTTAAACATGGTCAATCAAGAAGAAAGATGATCCGAAGAAATAACTTTTCAGGAAATTCTGTGTTTGTTGGAAATTATTGGTCCTTTTGAAAGTTGGCATTTTCTAACTTCTGACATGATCTGTGGTGATATTTGGTTGTTAAAATGCATTTTACTTGCAATGTTGATCTCATTACTTTAGTAACGTTAAATAGCTAGGAGTTGGAACAAGGGCATCAATTATAAACCGGGAACTCAGTGATTGTCGAAGAGGTGAAGGGGGATGATATTTTATCTTTACTTGGGGTTGGGTGGGTGCTAAAGATCACTGAAGGCGTTAATATTTCCCATGGACTTGGAAGTGTATTTTGGCTGGTTATCAACACTGCACTGGCGATAAATATTTATATCTGTTTAATTATTCATTTATTTCACCATTGAATTTTGATCAAGATGGCATTGGATGAAAATATGTTGCTTGGGAATTTTGTTTTCAAATTGTAGCTATGGCTAGAGTTGTTAGCCTTGTATTTTGAATTGTAGCAAGAAAAATTCAGAGTAGCATTGAGAAATGTGTTGTTTATACTACATAGTTAAAACTCAAGATTTTTAATATTATACCTAGATTGTATGTAATGCTGAAGGTTTGATGATCTTTATTTATTTTGCTTCTTTGTTTCTGATAGAGGACCTCCGAATAGGTGGGTTTATACTTTATACTAGGAAAAATAGGAGGAACAAGCGATTTAGAACCTTAGGGACTATTAATAAAAATAGCAGAATAATAACTGCCTTTTCAGTTTTGGTGGGATTTGTACAGGGGTAGTTGTTTATAAGGTAATTAAATTAAGGGAATAGTTTGGGACATCTTGTGAGAGTGAACTTAATTGAGAGGAGGGAGAGAACCAGGTCTCTCAAACAAATGGCGATTACAAGGAGAGTTTCTGTAGTACATTCTTGATCTGTGCTTCAGTATCATCTGGATACTGATTCTGAAGTGGGTTTTTTAAGATAAAGATTGGCTTTTTGTAATGTTTCCAATCCATTTCTACTAGTTTCCCACTGATATATGTGGTAAATTGTTCATTTACATTCTAAGGGAACTGATTTTATTTCACTCTATTTTAGCTAGATATATACTTGCTCACATTAATATTTTGTCTACTTAATCCTATTCTGTTTACAACTATTCTAAACTAAGAAAAATTGTATGTGTCGTCGAATGATTATGACAGGACAACCTTTCCGTAGTTGATATTCTCTCAGCATGTAATCTAGTCAACTACTTTGGAAAAACGGTTCTTGGGGGTTCTGGTGTTGGTCAGATCACTATCAATCCTATTCTCATAAAGAAGGTTTGTTGCTGAGTACTGTTACACTGATCCACACACTAAAAGGGGGTGGTGGATATGAGAAAAGCAGGATGGTCATGAATCTCATTTTGTCCTGAGATCTATTTTTATGAATGGCAGGGTTCAACAGCTGTAGCTCTATATGGCCTTGGGAACATTAGAGATGAAAGACTTAATAGGATGTTTCAAGTACTCAATTGATAAACTTTACTCTCAAGTCTCAAGTAGTTCATTCATATATTTAAGTGCACTAAAATATGTATGTGGTTTATTCTTTTTCAGACGCCACATGCTGTGCAGTGGATGCGACCTGAATCTCAGGAAGGGTGTGAAGTTTCTGATTGGTTCAACATTCTGGTACTTCATCAGAACAGGTTGTCTATCTTTGTGTCTAACTTTTTTGAAAGATTGTGTTTAATATCACCAAAATGTGTTGATTAACCCAAGATCTACACATTTAAAAATTATTTGTCGTGTAAATGTTGTTCAGTGTGTGAGATTTAAGATTTCAATCAATGTGACAATTGATGTTGTTTTGAACAATGGTATGCAGAGTGAAAACAAATCCCAAAAATGCAATAAATGAGCACTTCCTGCCACGCTTTCTAGACTTCATTGTATGGGGGCATGAGCACGAATGTTTGGTTGACCCTCAGGTTAGCTGTTTAAACATATCTTACGTGAGCTCAGATAGACACGTGTTGCGTTCTGCAAACTTAATATGGATTTTAATTTTCTTCAGGAAGTTCCAGGGATGGGATTTCATATTTCACAACCAGGATCGTCGGTTGCAACATCACTTATCGATGGAGAATCGAAGCCAAAACATGTGCTTCTTTTGGAAATTAAGGTTGTGTATATAATGAGAAACTTAATGACTCTTCATTGTAGTAACTATTGTCATATCTATATATTCTATATAAGTTCTTGACATAATTATTCTTGACAGGGAAATCAGTACCGCCCTACTAAGATACCTTTAACATCTGTCCGGCCTTTCGAGTATACAGAGGTCAGGTGATATTGTTTTGTTTTCATTTGTAATTACTCCCTCCGTCTCTTTAAATATGGCTCTTTGAACTACTAATACACAAGAATTAAGAAAGTTGGTTAATTTAGTTTGTAGCATCAAATTTGTTAATGGTTTATATTACTTTTCCAAAATTACACTTAAAATTGTCGGGACTTATCATCTCACTCTTTCCACTTAATTAATTTGTATTGTGACTCATCACTCCACCTCTTTTTCCAATCCTCAAGAGAGAGAGATGATGAAGTAATCAAGGTATTTTGGGTTAAAAAAAAAAAACTTAAATGCAGTTTTGGTCCTCCTATTTTAAAAGGACAAGACATAGATGCAGTTCTATGTGTGTTGTTTTTGTTGTTCCTCCCACAAAAAGGTAGTTTTTTTTAAATACAATTTTTTTGCACTTTTTTTTAATAAAAAATACAAAAACTGTCTCTTTGTGAGAGGAGCAACAAAAACAGCACATGTAGAACTGCATCTAAGTTTTGTCCATTTTAAAAACCGATTTTTTGGTTCCCCAATTTCACATTTTTCTGAATTTTCATGTCATGTCTCATTTTTGGGTCATTTTCCTGATGTGGCCTATTCATTAATGGCGTGGCAAAAATTATTAGACATTTTTTTTGTTGACACGGATACACAATGTGGCCATATAAGCCTTGTCACATCATTAATGAATAGACCACATCGGCATAGATCACCCCAAAATGGGATGGGGTGGAAAATTCAGGAAAAAAAAAAGTAAAATTGGGGTGCCAAAAAATCAGTTTTTTAAAGTGGAGGGACCAAAACTTTTTTTTTTAGATAACATAAAATAAGGAGACCAAAAGTGCAGTCAAGCCAAAAAACTATTAATGCAAGAGATAATTTGGAGGGTGTCTAATAAAAAGGGGCAAATAATTTCTCAAAATAGTCTTGTATTAACTTTATAAAGGTATCGAGGGAATATATCAGTTAAGTCCAACAAAATTCATTTCTCGAATTCATGACATTTACATCCGTCTTATAGGTTTTCAATAACCATATAAATCTTTATAATGCAGGTAGTACTAAAAGATATGCCTGATATTGATTCCAATGATCAGAATTCTATTCTTGAACATCTTGACAAAGTGGTATGTGTGGGTTTCTTGATATTGAATGAAAGTTCTTTTTCTTATGCCGTATAATTTGTTGTGCCCTTTTTCTTGTTAATTAGTTTTTGGGGAGAGGACCACCTAGGTTTCTTTTCTCAAAAGTCGTAGGGGCCAATGGTTTGGCTATAGACATGATTTTTGATAGAAATCAATGCACTGTTTGACCCATGTAGCTGACCTTACCTAGTGGCGTAAAACTTGGTTTTTGTTGTATATTTATGTAGAGATATGCGATCATATGTGTATCAACATTATTTTGATAATAGATGATTTTACAGGTTGAGAAGCTTATAGAAAAATCTAGTAAGAAGGTTGTCCAAAGAGCAGAACTTAAGCTTCCACTAGTACGTATCAAGGTAATTTCTATAAACCGGAGCATGACTTTCGAACACTTCTATATTCTAGGACACTTCCTCCTGTTTAGCATTTCAATTTGCAGGAAGTTTGATCTGCAATTCATGATTCTATAATCTCGCTGGTTTTGATATGACACTTGTATTCTATAAAAGGTAGTAATTTCATGATACCAAACCAATTAAATTCTATCCATCGTGCATGGAGTAGGATTTACAAATCCCTCAAAAGACAGTTTGTTATTAATATTTATTTGAACTTATGTTCAGTGTATTGATTTTAATGACATCTAGTTTTATAAGATATTACATTATGTTTTCTGGCATGACTCCAGGTCTCCAACTAATAAAACTTATTTTACAGGTAGATTACTCTGGATTTATGACTATAAATCCTCAAAGATTTGGGCAGAAATATGTAGGAAAGGTGATTTTCTATCATTCTTCCTAAATAACTGTGCTAATGCTGATTTTACTTGGAAGTTTTTTCTATTGTTGATTGGTCATCCTTATATTAGGTTGCAAACCCGCAAGACATTCTTATATTTTCAAAGGCATCCAAATTGGAGAAGGGTGCAGGTAATCTAAATATTTTTTTTTTAACTTTCTTTACCAGTTCATTTGACATTATCAACGCATTATTTGCCAGTTAAAATATCCAACACAGACATCTTTTATTAGTTATCTTGCTGAATCTAGATATAGTTTATCTTTATTTCACATTTTAGGTTGCAAAGTACATTTTATGTGCAGGTTTATCCATTTATTTTGAAGTTCAGTTTAATCTTGTTCACTCCAACATTTGACGCTGTTACTTTGAGTATGACGGATCCCTTTGTGATTTATTTTAAGCACCAGTTTGCCATGCCTTAGTAGCTCCTTGCAATATCCCATATAGAATATTACACATCCATATTAGTGACCCAAATTATAATTCACAAGATTCATATCCTTTAATTCAAAAAGCAATGCAGAGAGCATAAAACCACCTACATAGGATATTTATATAATTAATGGATGCTATACACATTTAAACTTTTGTGTTTATTTCCGAGTTACACATCCTTTTTGTTTTTTTGTTTTGATTAGGAATTTCCCCGAGTTACGCATCCTTTTTGTTTTTTTGTTATGATTAGAAATTTAGAATCAACATTAAGGTAATGTTTAAGTAATATTATTGGTTATGTTAATAATTGCTTACAAGGCATATGCAATCTCTGTTGAAGCAACTAAAATACCATGTTGGTTAAGTTGCATCTGGGAATTTGATTGTTTACCCCTACACTATTCATTTGTAGGCAAAATTGAGGATTCAGAACGGCTTCGTCCAGAAGAATTAAATCAACAGAACATAGAGGCTTTGGTTGCTGAAAATAATCTGGTATTTTATTCATTTTGTACTTTAATCCTTTAGTCTTCCTATATATTCCTATTTCGACAATGAACAACCACATAGGTTTATGTGACTCACTGACTGTGCATTTGTTATGAACCTTCACGTGGCATCCGGTAGAATCTTTCTTTCGATTATGGTTAAAACAAGAAGCAGACTAGTCCTTGACAGAACCCATCCTATACTAACAGAGTTTCCTAGAAAAATGATTTCTTTTATGTTTGCAATACCAGTCTTGCTGTTTCGAAAGGCTACAAATAATGAAGTGATTCTTATCAAACTACTACTGATAAGGAAGGATTCTGCTATTCAGAATCTTATCACGATAAAGAAATAAAACCACTGCTGATGATAAAGGTTCTGTTATCCAGAATCTTATCAAGATAAAAAACTTCAAAAGCATAATTTATCAGAGATCAAATAATCCTAATCAACAATTCCTAATTAGCAGAAGTTTAAAAAGATAAAATAATCCTACTGAATCAGTAATTCAAGATTTAAGCTGGTGTCTTCTTGTTCCTCTGGTGCTATGTGCCTATATAAGTAGTAGTGTATATTTTTAAATTCACAATTTAATTTTCTTGGGAACTCTCAGAACCTCTGGGTTGGGCCTAACTCAACCTTAGCGATGCCCACCTTTACTGGACAACTTCATTAGTATCTGGAATTCTAGATTGACTTTACTTTTGTTGAAGGTAAGATATATAAATTTAAAGAAATGCTAGTATAATTTTATTTTATCTCTGATGTATTTAACTCTTGATGGTTTTGCAGAAAATGGAGATACTTCCAGTCAATGATTTGGATATTGCTTTACACAATTTTGTGAACAAGGATGATAAAATGGCATTTTACACTTGTGTACAGTACAATATTGATGAAACACGGGTGAGATTCTTTATGATATTTATCCATTTTTATGCTTTTGTGTGTGATACTCATGCTGGAGCATCTACTACATATTGTATTCGACACCCTATTTATTAAGAATGAGTACATTATTTCTTCATTTTTTTTTTTGTTTGTGTTATGTTAATGTCATAACCCTCCTCTTCCCGTGATGACTAACTTTTCTGCTTGCGCAGAACAAAATTGCTAAGGATTCAAATGAGCCGAAGCTTGATGTGGAAGATTTAGTTGTTAAAGTTGGAGAATGCTTTGAGGTTAGAAGTTTCACCACTGTTTTTCATTAGTTTAGGAATCGATTATTCTCCATTAAATTTAGCCTTAGGTTAAAAGTTCACTTCGCCTATTGGAAGGCCTTTATTACTAGGGCTTTCATAAAATAGCATTATAGTGGTTGCAGATAATCTAGGTACTACAGTTGCCTATGTCCTCTTGACCTTCATCAATCTCCTTTTCTTTTTGCAATATTTGCAACTACTGAGCCTTCGTGATTCTTTGATTAGGTCATTGTGATCAGAATTATTTAGTGGACAGAACATACACGTAAGTGTGATCAGTGACTGATATCGCTCTCCTTTTTGTTCTAGGAACGTGTTAAGGAACGATCCACACGCTCCAAGGACTCTTCACAGTTCACTCCTGGTGCTCAGTCCTTTGAGGTAAATCCAACAAATGATATTATACATTGATACTTGCTATTGCATTTGAAAATTATGGAAAAAGCAGGGTTTTGGGCAAGTGATATTATTCATGACCTTCATTCTTAGCTTATCTCTTTATTCCGTACAGGGTTTTCAAGGCAGAAGTGCAGCTGGAGCTGATAGTGCGGTTTCCTTCAGCGATGATGAAGATGCCATGCCAACATCAAGCTCAAAACCAAGCACCAGAGGTCGGAAAGGATCTGTTGCATCTCAAACTACAACCAGAGGAAGAGGAAGGGGCAGGGGTAGGGGAAGAGGCAAGGATTCCAGCACCTTGAAGCAGACAACCCTTGATGGATCTTTAGGGTTTCGCCCTTCTCAAAGGTTGCATTTGCTAAGAAATAAATCATTTTAGTTACTTTTTTCATTTCTATGCAACAAAGTAAATCCAGAGGGGATACGGAAGTGATGATGACTAAAAAATGAGCTCCTCCCTTAGCCCCGCCCCCCCCCCCCCCCCCCCCTCCCTCCTCTCAAAGAATGAGTTCATTTTTATTTAATGTCCAACAGTATCCAATTGAACAAACATGTCTTTACAGTGAGAATATATTTATCCCATTTCAGTATATATTCATATTATTATTAGAGTCATGACTCTGATACCCAACTTTGCTGCTTCATGCATCCCTGTTGCTTTAGCCAGTGTGAACAAAGCACTTTTTAGATCATGAAAAGAATCTAAAGTTAGATTATTTTTGCCATTTTAGGGTTTAGATAAAGTCATTCTGATTTTCCCTTGACAGTGTCTTGACTGTGAATATGCATCCAACATGATTTCATTGACTTGATGCAGGTCTGCAGCAACTTCCATCCAAAGTGGTGCTGATGATGGGGATAATATGGCTTCAAGTGACGATGCCAAAGGAAATGCAGTGGAAGAGATTGATGACAGTTCGGTATGGATTAATGCAAGTTCCTTCAAATATGAAATATATTAAGATCTTTGGTTCAGCTATAGTTTGATTTCTACAGCCTGACAATTTTGTGTGCATTGAACTGTAATTTGTCACGAAATATCCTTGACATACTAAATTATTAAGTAACCTGCTGCATCTTATATTTGCATAGGACAATGAATCCAATCTACCGGCACGGAAAAGGGCTGCTCCAAGGGGAAGAGGTAGAGGTGCTACACAGTCTTCTAAACGGGGGAGGAAAACAGAAAACTCTTCAATCCATAGAATGCTCATGAACAATGACGACGACGACGATGATGATGACAATCCTCAAAAGAGATTAAATACGTCTCAACCTCGGGTTTGTGCTCCCTTTCAACTCTTCACCTGTTTCTTATAGGATCTATATTACTAATGCAAAATGCTTATTTGAACAAATGATGGTCCATCTTGTGTTCTTTTACATTTACTACTCATTACCCTTTATGGTACCCATAGTAATTATAGCCAGCAGAACATGAGAATTTTATTTATGCTTGGGTGGCAAAGACCTCAGATATTCCAAATTAAATGTCACAAAAATGTTGATCGGGATACTTTTGATAGATCACCTTGAAATCCGCATGATTCTCTTAATTTCTGTATTTGGCACTTGCAAATAAATTTTTGTTGGTGTTTCATTCAGTCGAACTAAACGATGTTAAGATTAACTGAAGGGGGAATTGATTGCTGACTTTTTTATCTATACTTTTGCTTATGCCTCTTATCACCATGTTGCCAAGATCTGTTTTTAGCAAATATAAAATGCAGTTGTGGTCAGTTTGGTCAAGTCTTGCCATGGTGCTATGACATGGCGGATTTTGTGCCAGCTGCAACACCTATTGTATTTGGATTCGCCATGTCTCTGCCATAGGCCGCAACACCCTGTTTATATGGCAGATTTTTTGGCTCACCGTCATAATCTGTCATCCGCTATTGATAACACTGGTTGATAGTGGAACTTTTTGATTCATAACTTTCTTTGGAGTTGTGTGGTTTCATGGAACTAAGCCCTTTTCTTGTTTTTAGGTGACAAGAAACTATGGAGCTATCAGAAGATGA
Protein sequence

>MS.gene90136.t1

MADAEENTLRILIATDCHLGYMEKDEVRRHDSFQAFEEICSIAEKKHVDFMLLGGDLFHENKPSRSTLVKAIEILRRYCLNDRPVPFQVVSDQTLNFQNTFGHVNYEDPHFNVGLPVFTIHGNHDDPAGVDNLSVVDILSACNLVNYFGKTVLGGSGVGQITINPILIKKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCEVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFIVWGHEHECLVDPQEVPGMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLTSVRPFEYTEVVLKDMPDIDSNDQNSILEHLDKVVEKLIEKSSKKVVQRAELKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASKLEKGAGKIEDSERLRPEELNQQNIEALVAENNLKMEILPVNDLDIALHNFVNKDDKMAFYTCVQYNIDETRNKIAKDSNEPKLDVEDLVVKVGECFEERVKERSTRSKDSSQFTPGAQSFEGFQGRSAAGADSAVSFSDDEDAMPTSSSKPSTRGRKGSVASQTTTRGRGRGRGRGRGKDSSTLKQTTLDGSLGFRPSQRSAATSIQSGADDGDNMASSDDAKGNAVEEIDDSSDNESNLPARKRAAPRGRGRGATQSSKRGRKTENSSIHRMLMNNDDDDDDDDNPQKRLNTSQPRVTRNYGAIRR