AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052020.t1 MTR_2g098830 84.899 1629 141 7 1 1587 1 1566 0.0 2775
MS.gene052020.t1 MTR_2g098830 82.792 1354 132 6 272 1587 9 1299 0.0 2238
MS.gene052020.t1 MTR_2g098830 66.434 429 93 5 1 422 644 1028 1.03e-171 553
MS.gene052020.t1 MTR_2g098830 55.263 152 32 1 1226 1341 8 159 9.35e-39 159
MS.gene052020.t1 MTR_4g067090 54.312 661 253 11 958 1588 2 643 0.0 667
MS.gene052020.t1 MTR_4g067090 54.545 429 141 6 4 423 5 388 2.35e-139 445
MS.gene052020.t1 MTR_4g067090 37.681 138 75 3 824 958 360 489 3.89e-14 78.2
MS.gene052020.t1 MTR_2g098720 66.575 365 121 1 958 1322 1 364 6.81e-158 485
MS.gene052020.t1 MTR_2g098720 68.524 359 94 6 1 351 1 348 3.09e-150 465
MS.gene052020.t1 MTR_2g098710 64.110 365 121 4 964 1322 6 366 1.89e-149 464
MS.gene052020.t1 MTR_2g098710 66.391 363 97 8 7 355 6 357 3.77e-145 452
MS.gene052020.t1 MTR_2g098730 69.182 318 79 6 1 310 1 307 3.49e-132 417
MS.gene052020.t1 MTR_2g098730 62.577 326 120 2 958 1282 1 325 5.40e-131 414
MS.gene052020.t1 MTR_0002s1280 61.424 337 88 3 958 1291 1 298 2.38e-128 403
MS.gene052020.t1 MTR_0002s1280 60.983 346 77 4 1 336 1 298 4.27e-126 397
MS.gene052020.t1 MTR_2g098770 52.959 338 80 4 958 1292 1 262 1.71e-97 320
MS.gene052020.t1 MTR_2g098770 50.407 369 82 7 1 353 1 284 6.56e-96 315
MS.gene052020.t1 MTR_8g463810 76.471 51 12 0 1311 1361 31 81 1.90e-18 90.1
MS.gene052020.t1 MTR_8g463810 42.735 117 61 2 821 932 31 146 2.36e-14 77.8
MS.gene052020.t1 MTR_2g098740 58.065 62 26 0 961 1022 23 84 9.67e-14 69.3
MS.gene052020.t1 MTR_2g098780 53.846 65 30 0 958 1022 1 65 4.06e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052020.t1 AT1G05950 44.444 306 137 6 961 1265 14 287 4.99e-71 249
MS.gene052020.t1 AT1G05950 41.853 313 137 6 4 310 14 287 1.12e-61 222
MS.gene052020.t1 AT1G05950 50.000 84 38 2 1402 1485 444 523 5.45e-13 74.3
MS.gene052020.t1 AT1G05950 44.444 306 137 6 961 1265 14 287 7.77e-71 249
MS.gene052020.t1 AT1G05950 41.853 313 137 6 4 310 14 287 1.65e-61 222
MS.gene052020.t1 AT1G05950 43.697 119 60 3 1402 1520 444 555 5.87e-14 77.4
MS.gene052020.t1 AT1G05950 44.444 306 137 6 961 1265 14 287 7.77e-71 249
MS.gene052020.t1 AT1G05950 41.853 313 137 6 4 310 14 287 1.65e-61 222
MS.gene052020.t1 AT1G05950 43.697 119 60 3 1402 1520 444 555 5.87e-14 77.4
MS.gene052020.t1 AT1G05950 44.444 306 137 6 961 1265 14 287 2.98e-70 249
MS.gene052020.t1 AT1G05950 41.853 313 137 6 4 310 14 287 5.23e-61 222
MS.gene052020.t1 AT1G05950 46.053 152 75 3 1402 1553 444 588 5.23e-27 119
MS.gene052020.t1 AT1G05950 44.444 306 137 6 961 1265 14 287 7.12e-70 248
MS.gene052020.t1 AT1G05950 41.853 313 137 6 4 310 14 287 1.11e-60 221
MS.gene052020.t1 AT1G05950 43.125 160 84 3 1402 1561 444 596 2.55e-24 110

Find 254 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAGAATTTGTGGCATTTA+AGG 0.143029 2.2:-3967376 MS.gene052020:CDS
CAAGCTACTGTAAGAGTTAA+AGG 0.144942 2.2:-3961868 MS.gene052020:CDS
AATCCATTCTGAGATTATTT+TGG 0.183672 2.2:+3970998 None:intergenic
GAGAACTGCTTCTTGCATTT+TGG 0.220926 2.2:-3972196 MS.gene052020:CDS
CCTTCTTACTGTCGACTAAA+AGG 0.232115 2.2:+3967142 None:intergenic
GAATATGTCATGAAAATAAT+TGG 0.240093 2.2:-3962066 MS.gene052020:CDS
TGTTGGAACTATTTGCATTC+AGG 0.252524 2.2:+3963537 None:intergenic
TAGTATTGATATTATGCTTT+TGG 0.260280 2.2:-3966533 MS.gene052020:CDS
TAGTATTGATATTATGCTTT+TGG 0.260280 2.2:-3971559 MS.gene052020:CDS
ACTTTCTGCTGTTGAGATAT+TGG 0.266453 2.2:+3968496 None:intergenic
TAATCTCAGAATGGATTTCT+AGG 0.271070 2.2:-3970992 MS.gene052020:intron
TAATCTCAGACTGGATTTCT+AGG 0.277824 2.2:-3964667 MS.gene052020:intron
GCTGGCAGAAATACCTATTC+TGG 0.286037 2.2:-3973993 MS.gene052020:CDS
TCTGAGATTATTTCGGAATA+AGG 0.286569 2.2:+3964680 None:intergenic
ATGGGCCACCCCTCTATATT+AGG 0.295067 2.2:+3972256 None:intergenic
CTTTCAATTAAATCTTTGAT+AGG 0.306694 2.2:+3966412 None:intergenic
GTCCTACTGTGGATGCAATT+AGG 0.307282 2.2:-3974045 MS.gene052020:CDS
TATTCTTCTTTGAGTTTAGA+TGG 0.308246 2.2:+3969140 None:intergenic
TTCAAAAGTTGCCGTCCTTT+TGG 0.316213 2.2:-3972233 MS.gene052020:CDS
ATTCTGTCACTTCATGCTTT+GGG 0.320249 2.2:+3964399 None:intergenic
TAGGGCATTTCTTGAACATT+TGG 0.321250 2.2:-3974026 MS.gene052020:CDS
CCTTTGAAGCTATGAAAGTT+TGG 0.321313 2.2:+3963498 None:intergenic
TTCTGTGTGAATTTCATATA+CGG 0.322544 2.2:+3972382 None:intergenic
ATGGGCCATCCCTCTATATC+TGG 0.332584 2.2:+3967180 None:intergenic
TTTCTTTAACTTCAAGCTTC+GGG 0.333801 2.2:+3970614 None:intergenic
AAGCTGTCTTCTCTTTGCTC+TGG 0.340297 2.2:+3971517 None:intergenic
GGAAAGTTACACTGTGTATT+CGG 0.348170 2.2:-3966512 MS.gene052020:CDS
TCCTACTGTGGATGCAATTA+GGG 0.352068 2.2:-3974044 MS.gene052020:CDS
CTTTCAGTTAAATCTTTGAT+AGG 0.353682 2.2:+3971438 None:intergenic
GATTCTGTCACTTCATGCTT+TGG 0.355327 2.2:+3964398 None:intergenic
TGTTGAAATTATCTGCAATC+AGG 0.361667 2.2:+3968668 None:intergenic
TGTCAAGAAAGACGAGGATA+TGG 0.366263 2.2:-3969717 MS.gene052020:CDS
ACCGTTACAGCCTTCTATAA+TGG 0.369036 2.2:+3962653 None:intergenic
ACAGCAGAAAGTTGCAAAAC+AGG 0.369097 2.2:-3968485 MS.gene052020:intron
TTCATTAACTTGTAAAGTAT+TGG 0.372964 2.2:+3969103 None:intergenic
AAGAAGTGTTCCTAATATAG+AGG 0.376503 2.2:-3972266 MS.gene052020:CDS
CCTTTGGTCAAAAGAAGTTC+TGG 0.377104 2.2:-3971071 MS.gene052020:CDS
AATCCAGTCTGAGATTATTT+CGG 0.378818 2.2:+3964673 None:intergenic
GGATAGCGTCCGGGGTCCTT+TGG 0.378838 2.2:-3971087 MS.gene052020:intron
GCTACTTTAGTATCACTTCC+TGG 0.382812 2.2:+3964332 None:intergenic
AAGTATTGGCAATATGCTTC+TGG 0.385074 2.2:+3969117 None:intergenic
ATTCTGTAACTTCAAGCTTC+GGG 0.385213 2.2:+3970722 None:intergenic
GCATAGTGCCAATACTTTAC+AGG 0.385936 2.2:-3964186 MS.gene052020:intron
TTGATCTTGCAGGAACTAGA+TGG 0.390794 2.2:-3962088 MS.gene052020:intron
ATTTCTTTAACTTCAAGCTT+CGG 0.395244 2.2:+3970613 None:intergenic
GTCCTACTGTGGATGCAGTT+AGG 0.395558 2.2:-3968582 MS.gene052020:CDS
ACTTTCTGCTGTTGTGATAG+TGG 0.399168 2.2:+3973962 None:intergenic
TGTCAAGAAAGACGAGGATA+TGG 0.399475 2.2:-3970473 MS.gene052020:CDS
GCATCCAGAGCTAGAATTTG+TGG 0.406085 2.2:-3967385 MS.gene052020:CDS
GAATCCAGAGCTAGAATTTG+TGG 0.406085 2.2:-3972455 MS.gene052020:CDS
TGTCAAGGAAGACTGGGATA+TGG 0.407345 2.2:-3964258 MS.gene052020:CDS
AAGTTAGAATCCATTATAGA+AGG 0.407710 2.2:-3962663 MS.gene052020:CDS
GATTCTGTAACTTCAAGCTT+CGG 0.409278 2.2:+3970721 None:intergenic
AGCTGGATATTCTGCTGTTA+AGG 0.413381 2.2:-3971987 MS.gene052020:CDS
CAAGTTTCTGAAGATACAAA+TGG 0.414948 2.2:-3967042 MS.gene052020:CDS
AGCACAAGAGCCAAAATTAG+AGG 0.415770 2.2:+3961732 None:intergenic
TCAACGAGGTCAGTTTGATC+AGG 0.416526 2.2:+3967288 None:intergenic
GAAGCCTTTGCTGGCAGCAT+TGG 0.419671 2.2:+3968535 None:intergenic
GTTGGAACTATTTGCATTCA+GGG 0.426572 2.2:+3963538 None:intergenic
AGCTGTCTTCTCTTTGCTCT+GGG 0.427005 2.2:+3971518 None:intergenic
TCCTACTGTGGATGCAGTTA+GGG 0.428934 2.2:-3968581 MS.gene052020:CDS
TCCACATCAACAAGGTCAAC+AGG 0.433578 2.2:+3972358 None:intergenic
AGAATCACATGTAAGTAGTA+AGG 0.440778 2.2:-3964381 MS.gene052020:CDS
GTTCCACCACTGATGGGGTA+TGG 0.442038 2.2:-3967098 MS.gene052020:CDS
TAAAAGTGTACATATATCAT+AGG 0.444300 2.2:+3972297 None:intergenic
CACTTTGCAAAGTCCGTGCC+AGG 0.445701 2.2:-3962535 MS.gene052020:intron
TTCACTTACCTGTAAAGTAT+TGG 0.447276 2.2:+3964178 None:intergenic
GTTAAGAAGCCTTCGAGAAA+CGG 0.450657 2.2:-3972040 MS.gene052020:CDS
CTCATCTTTGGATAGCGTCC+GGG 0.454500 2.2:-3971096 MS.gene052020:intron
GTGATTCTGTCAAGGAAGAC+TGG 0.454947 2.2:-3964265 MS.gene052020:CDS
CATAGCTTCGAAGAGGAAGA+TGG 0.455683 2.2:-3968620 MS.gene052020:CDS
GATCTTCTCAAGATTTGTGT+TGG 0.457122 2.2:+3963520 None:intergenic
TGTCAAGGAAGACCAGGATA+TGG 0.457685 2.2:-3969186 MS.gene052020:CDS
AATGCCACAAATTCTAGCTC+TGG 0.460242 2.2:+3967381 None:intergenic
TACAATCACGCAGTGTGGTT+CGG 0.461292 2.2:-3969927 MS.gene052020:CDS
TCACGGCTAGAAGCCTTTGC+TGG 0.462181 2.2:+3968526 None:intergenic
TAGGGCATTCGTTGAACACT+TGG 0.464155 2.2:-3968563 MS.gene052020:CDS
TGTCAAGAAAGATCATGATA+TGG 0.466559 2.2:-3970095 MS.gene052020:CDS
GGCTTGTTATCAAGACCAAC+AGG 0.469791 2.2:+3970379 None:intergenic
GGTCAAGAAAGACCATGATA+TGG 0.470543 2.2:-3969339 MS.gene052020:CDS
GGTCAAGAAAGACCATGATA+TGG 0.470543 2.2:-3969906 MS.gene052020:CDS
CTGTCAAGAAAGACGAGGAT+AGG 0.472021 2.2:-3970285 MS.gene052020:CDS
CCAAACTTTCATAGCTTCAA+AGG 0.473411 2.2:-3963498 MS.gene052020:CDS
TACAATCATGCAGTGTGGTT+CGG 0.473677 2.2:-3969360 MS.gene052020:CDS
CAAACTTTCATAGCTTCAAA+GGG 0.477401 2.2:-3963497 MS.gene052020:CDS
AATGCCACAAATTCTAGCTC+TGG 0.478850 2.2:+3972451 None:intergenic
ATAGGTATTTCTGCCAGCAT+TGG 0.486764 2.2:+3973998 None:intergenic
AGTTGGTTATTCTGCTGTAA+AGG 0.487889 2.2:-3966938 MS.gene052020:CDS
ATGGTTGTGGTATAACTATA+CGG 0.491124 2.2:-3964289 MS.gene052020:CDS
CCTTCTTACTATCGACCAAA+AGG 0.491760 2.2:+3972218 None:intergenic
TGCTCACAGTCGACAGCTGA+TGG 0.492405 2.2:-3966448 MS.gene052020:CDS
TCTTCAGCAGCGCGCGATAG+AGG 0.496928 2.2:-3963267 MS.gene052020:CDS
ATTGATCTTGATAACAAGCC+AGG 0.497827 2.2:-3964350 MS.gene052020:CDS
TCAAAAGAAGTTCTGGCAGT+TGG 0.500806 2.2:-3971064 MS.gene052020:CDS
TTCATATACGGTAACAAAGC+TGG 0.503834 2.2:+3972394 None:intergenic
TCAATGCTCTTATACGAAAG+AGG 0.506318 2.2:-3963451 MS.gene052020:CDS
ATCTCTTGCTTCGCGAGGAA+AGG 0.507021 2.2:+3961807 None:intergenic
AGTAGCGAGGGCATGTCTGC+TGG 0.509063 2.2:-3970583 MS.gene052020:CDS
AGTGGAGGATAATCCAGAAT+AGG 0.512689 2.2:+3973980 None:intergenic
GGTACATGGTTAAGAAATCA+AGG 0.515023 2.2:-3962633 MS.gene052020:CDS
TGCAGCTCTTAATCAGAAAG+AGG 0.516884 2.2:-3969396 MS.gene052020:CDS
ATTGGATTGCCAGGCTGAGA+AGG 0.517463 2.2:-3963669 MS.gene052020:intron
TAGAAGGCTGTAACGGTACA+TGG 0.518312 2.2:-3962647 MS.gene052020:CDS
GATAGAGATACACTATAAGT+TGG 0.520216 2.2:+3962037 None:intergenic
CAACGAGGTCAGTTTGATCA+GGG 0.524231 2.2:+3967289 None:intergenic
ATTCCAAAATAATCTCAGAA+TGG 0.526151 2.2:-3971001 MS.gene052020:CDS
GATAAACTTCAAACCTCGCT+AGG 0.526955 2.2:+3969026 None:intergenic
GTTACAATAGTTTCGCTGCA+TGG 0.528534 2.2:+3970655 None:intergenic
GAAATTCATGTAAGTAGCGA+GGG 0.529019 2.2:-3970595 MS.gene052020:CDS
TGCTCACAGTCGATCAGTGA+AGG 0.529950 2.2:-3971474 MS.gene052020:CDS
GAAAGATCATGGTATGGATG+TGG 0.532023 2.2:-3969522 MS.gene052020:CDS
AGTTATCCACATCCATATCA+TGG 0.533909 2.2:+3969327 None:intergenic
TTCTGCTGTTGAGATATTGG+AGG 0.535331 2.2:+3968499 None:intergenic
TGTCAAGAAAGACGAGGATA+GGG 0.535707 2.2:-3970284 MS.gene052020:CDS
TGTTATCAAGACCAACAGAC+AGG 0.535916 2.2:+3970680 None:intergenic
AGTTGTCCACATCCATATCC+TGG 0.536631 2.2:+3969174 None:intergenic
ATTGGATTGGCAGGCTGAGA+AGG 0.536680 2.2:-3968800 MS.gene052020:intron
GAAAGACGAGGATAGGGATG+TGG 0.537369 2.2:-3970278 MS.gene052020:CDS
GAGATACACTATAAGTTGGT+AGG 0.538498 2.2:+3962041 None:intergenic
CTATCAAAGATTTAATTGAA+AGG 0.539397 2.2:-3966411 MS.gene052020:intron
AGTTATTCACATCCATATCA+TGG 0.539702 2.2:+3969894 None:intergenic
TGCAGCTCTTAATCAGAAAG+AGG 0.539794 2.2:-3969963 MS.gene052020:CDS
GTTCTATCACTGATGGGGTA+CGG 0.540451 2.2:-3972174 MS.gene052020:CDS
GTTGACCAAATTTAGAAGTG+TGG 0.541024 2.2:-3961767 MS.gene052020:CDS
ACATGTAAGTAGAGAGGTCA+TGG 0.543710 2.2:-3969267 MS.gene052020:CDS
GACTTTGAGTATTCGTGCGA+GGG 0.544336 2.2:-3961841 MS.gene052020:CDS
GAAAGACGAGGATATGGATG+TGG 0.544971 2.2:-3969711 MS.gene052020:CDS
GAAAGACGAGGATATGGATG+TGG 0.544971 2.2:-3970467 MS.gene052020:CDS
CTATCAAAGATTTAACTGAA+AGG 0.547353 2.2:-3971437 MS.gene052020:intron
TTCATATATATTAACAACGC+TGG 0.548393 2.2:+3967324 None:intergenic
TGATCCAATGCTGCCAGCAA+AGG 0.549274 2.2:-3968539 MS.gene052020:CDS
AAAATTCAGAGATGGTTAGC+TGG 0.549868 2.2:-3963221 MS.gene052020:intron
CAGAAAGAGAACAATGGTTG+TGG 0.553769 2.2:-3964302 MS.gene052020:CDS
GAAAGATCATGATATGGATG+TGG 0.554210 2.2:-3970089 MS.gene052020:CDS
GTTGAAATTATCTGCAATCA+GGG 0.555509 2.2:+3968669 None:intergenic
TTCTGCTGTTAAGGAAGCTG+CGG 0.557671 2.2:-3971978 MS.gene052020:CDS
GCCTGTTGACCTTGTTGATG+TGG 0.558017 2.2:-3972359 MS.gene052020:CDS
AGAAGTGTTCCTAATATAGA+GGG 0.564122 2.2:-3972265 MS.gene052020:CDS
CAGAAAGAGGACAACGGTTG+CGG 0.564386 2.2:-3969383 MS.gene052020:CDS
AGTAGAGAGGTCATGGCTGT+TGG 0.566221 2.2:-3969260 MS.gene052020:CDS
GGAAGACTGGGATATGGATG+TGG 0.567799 2.2:-3964252 MS.gene052020:CDS
GGTTCTGTCAAGAAAGATCA+TGG 0.569305 2.2:-3969533 MS.gene052020:CDS
AAGTTTCTGAAGATACAAAT+GGG 0.569815 2.2:-3967041 MS.gene052020:CDS
GAAAGACCATGATATGGATG+TGG 0.569888 2.2:-3969333 MS.gene052020:CDS
AGTAGCGAGGCCCTGTCTGT+TGG 0.570221 2.2:-3970691 MS.gene052020:CDS
GGAAGACCAGGATATGGATG+TGG 0.572264 2.2:-3969180 MS.gene052020:CDS
TAGTTTGCAAGATTCAAAGC+TGG 0.573315 2.2:-3964435 MS.gene052020:CDS
CTGAGAAGGTTGTTTCAACA+AGG 0.573360 2.2:-3968786 MS.gene052020:CDS
GAATCACATGTAAGTAGTGA+GGG 0.573633 2.2:-3969839 MS.gene052020:CDS
GAATCACATGTAAGTAGTGA+GGG 0.573633 2.2:-3970217 MS.gene052020:CDS
ATTCCGAAATAATCTCAGAC+TGG 0.575612 2.2:-3964676 MS.gene052020:CDS
GAATCACATGTAAGTAGTAA+GGG 0.576164 2.2:-3964380 MS.gene052020:CDS
GCTCACAGTCGACAGCTGAT+GGG 0.576900 2.2:-3966447 MS.gene052020:CDS
TAGTTTGCAAGATTCAAAGC+TGG 0.577178 2.2:-3970758 MS.gene052020:CDS
AGTAGCGAGGGCATGTCTGT+TGG 0.578107 2.2:-3969449 MS.gene052020:CDS
AGTAGCGAGGGCATGTCTGT+TGG 0.578107 2.2:-3969638 MS.gene052020:CDS
AGTAGCGAGGGCATGTCTGT+TGG 0.578107 2.2:-3970016 MS.gene052020:CDS
GCTCTTATACGAAAGAGGAA+TGG 0.578484 2.2:-3963446 MS.gene052020:CDS
AGTAGTGAGGGCATGTCTGT+TGG 0.581264 2.2:-3969827 MS.gene052020:CDS
AGTAGTGAGGGCATGTCTGT+TGG 0.581264 2.2:-3970205 MS.gene052020:CDS
TTTCTGATTAAGAGCTGCAA+TGG 0.582464 2.2:+3969967 None:intergenic
CAGAAAGAGAACAACGGTTG+CGG 0.583594 2.2:-3969761 MS.gene052020:CDS
CAGAAAGAGAACAACGGTTG+CGG 0.583594 2.2:-3970328 MS.gene052020:CDS
ACATTTGGTTGATCCAATGC+TGG 0.584375 2.2:-3974011 MS.gene052020:CDS
GAATCACATGTAAGTAGCGA+GGG 0.587107 2.2:-3969461 MS.gene052020:CDS
GAATCACATGTAAGTAGCGA+GGG 0.587107 2.2:-3970028 MS.gene052020:CDS
TGTCAAGAAAGATCATGGTA+TGG 0.587316 2.2:-3969528 MS.gene052020:CDS
TGTATCTTCAGAAACTTGAT+CGG 0.587578 2.2:+3967047 None:intergenic
TCCATTATAGAAGGCTGTAA+CGG 0.587717 2.2:-3962654 MS.gene052020:CDS
TCAAACTGACCTCGTTGATG+TGG 0.592152 2.2:-3967283 MS.gene052020:CDS
ACATTTGATCCGTTTCTCGA+AGG 0.593383 2.2:+3972031 None:intergenic
AGTAGTGAGGGCATGCCTGT+TGG 0.593797 2.2:-3970394 MS.gene052020:CDS
CATGGTTAAGAAATCAAGGA+AGG 0.596747 2.2:-3962629 MS.gene052020:CDS
TATAGTGTATCTCTATCAGA+TGG 0.596779 2.2:-3962031 MS.gene052020:intron
TATACGAAAGAGGAATGGAC+TGG 0.597795 2.2:-3963441 MS.gene052020:intron
AGAAAGCACATCACTGAGGG+TGG 0.598680 2.2:-3963635 MS.gene052020:CDS
TACACAGTGTAGTTCTGTCA+AGG 0.599872 2.2:-3969201 MS.gene052020:CDS
TAGTTCTGTCAAGGAAGACC+AGG 0.600042 2.2:-3969192 MS.gene052020:CDS
TCTGCTGTAAAGGAAGCTAC+CGG 0.601256 2.2:-3966928 MS.gene052020:intron
ATCTGATGTGTGTCCTACTG+TGG 0.606281 2.2:-3968593 MS.gene052020:CDS
GAATCACATGTAAGTAGCGA+GGG 0.607142 2.2:-3969650 MS.gene052020:CDS
GCGCGCGATAGAGGATGAGA+TGG 0.608807 2.2:-3963258 MS.gene052020:CDS
AGGATGCACATTACTGAGGG+TGG 0.608899 2.2:-3968766 MS.gene052020:CDS
ATAGCTTCGAAGAGGAAGAT+GGG 0.609022 2.2:-3968619 MS.gene052020:CDS
ACAAAAGATAGAAAATTCAT+CGG 0.609701 2.2:-3969078 MS.gene052020:CDS
AGAAATTCATGTAAGTAGCG+AGG 0.609941 2.2:-3970596 MS.gene052020:CDS
AACAAGGATGCACATTACTG+AGG 0.610296 2.2:-3968770 MS.gene052020:CDS
GTAATATGAAAATTCAGAGA+TGG 0.610374 2.2:-3963229 MS.gene052020:CDS
AGAACATGTCTTGCCTGGCA+CGG 0.612050 2.2:+3962522 None:intergenic
AAAAGAAAGCACATCACTGA+GGG 0.612477 2.2:-3963638 MS.gene052020:CDS
TGATTCTGTCAAGGAAGACT+GGG 0.612643 2.2:-3964264 MS.gene052020:CDS
GCACAAGAGCCAAAATTAGA+GGG 0.616086 2.2:+3961733 None:intergenic
ACAAGGATGCACATTACTGA+GGG 0.616230 2.2:-3968769 MS.gene052020:CDS
AAAGTTTCATAGCTTCGAAG+AGG 0.617952 2.2:-3968627 MS.gene052020:CDS
AGAAGCACATGCAAGTAGTG+AGG 0.620392 2.2:-3970407 MS.gene052020:CDS
TGACCATACCCCATCAGTGG+TGG 0.620761 2.2:+3967095 None:intergenic
TCTGCTGTTAAGGAAGCTGC+GGG 0.620915 2.2:-3971977 MS.gene052020:intron
CTTAATCAGAAAGAGAAGAA+CGG 0.621054 2.2:-3970523 MS.gene052020:CDS
GGACTTTGAGTATTCGTGCG+AGG 0.621197 2.2:-3961842 MS.gene052020:CDS
TCATCTTTGGATAGCGTCCG+GGG 0.622008 2.2:-3971095 MS.gene052020:intron
AGAATCACATGTAAGTAGTG+AGG 0.623531 2.2:-3969840 MS.gene052020:CDS
AGAATCACATGTAAGTAGTG+AGG 0.623531 2.2:-3970218 MS.gene052020:CDS
ATCAGATGTGTGTCCTACTG+TGG 0.625859 2.2:-3974056 MS.gene052020:CDS
GCTGCAATGGTATCATTGCA+TGG 0.627458 2.2:+3969980 None:intergenic
GAAGCACATGCAAGTAGTGA+GGG 0.627601 2.2:-3970406 MS.gene052020:CDS
GAGATATTGGAGGTGCATCA+CGG 0.628198 2.2:+3968509 None:intergenic
GCTCACAGTCGATCAGTGAA+GGG 0.630222 2.2:-3971473 MS.gene052020:CDS
TAAGATTTGTGCTGATGCCA+CGG 0.632079 2.2:-3968719 MS.gene052020:CDS
TATACGGTGTGATTCTGTCA+AGG 0.633610 2.2:-3964273 MS.gene052020:CDS
TGAATGTACAAGACCTAGCG+AGG 0.635184 2.2:-3969039 MS.gene052020:intron
GCTGAATCTCTTGCTTCGCG+AGG 0.639784 2.2:+3961802 None:intergenic
AGAATCACATGTAAGTAGAG+AGG 0.640253 2.2:-3969273 MS.gene052020:CDS
TGCGGTACAATCACGCAGTG+TGG 0.640998 2.2:-3969932 MS.gene052020:CDS
AGAATCACATGTAAGTAGCG+AGG 0.643178 2.2:-3969462 MS.gene052020:CDS
AGAATCACATGTAAGTAGCG+AGG 0.643178 2.2:-3970029 MS.gene052020:CDS
TAAGAGTAAAAGATTGACAG+AGG 0.645315 2.2:-3962565 MS.gene052020:CDS
GCCCTAATTGCATCCACAGT+AGG 0.646089 2.2:+3974043 None:intergenic
TGCGGTACAATTACTCAGTG+TGG 0.649902 2.2:-3969554 MS.gene052020:CDS
TGCGGTACAATTACTCAGTG+TGG 0.649902 2.2:-3970121 MS.gene052020:CDS
AGAATCACATGTAAGTAGCG+AGG 0.650167 2.2:-3969651 MS.gene052020:CDS
CTTACTATCGACCAAAAGGA+CGG 0.651257 2.2:+3972222 None:intergenic
CAGAAAGAGGACAACGATTG+CGG 0.653164 2.2:-3969950 MS.gene052020:CDS
GTTACAATAGTATCACTGCA+TGG 0.654081 2.2:+3969602 None:intergenic
GTTACAATAGTATCACTGCA+TGG 0.654081 2.2:+3970169 None:intergenic
GTTACAATAGTATCACTGCA+TGG 0.654081 2.2:+3970547 None:intergenic
CTGACCTCGTTGATGTGGAG+CGG 0.656253 2.2:-3967278 MS.gene052020:CDS
TTTCGGAATAAGGAAGCACG+TGG 0.656466 2.2:+3964690 None:intergenic
CACTGACCATACCCCATCAG+TGG 0.656521 2.2:+3967092 None:intergenic
GCTGCAATAGTATCACTGCA+TGG 0.660142 2.2:+3969413 None:intergenic
GCTGCAATAGTATCACTGCA+TGG 0.660142 2.2:+3969791 None:intergenic
ATGTTCCAGATATAGAGGGA+TGG 0.660253 2.2:-3967185 MS.gene052020:CDS
TTCTGCTGTTGTGATAGTGG+AGG 0.662009 2.2:+3973965 None:intergenic
GCTGCGATAGTATCACTGCA+TGG 0.662438 2.2:+3970358 None:intergenic
CTTAATCAGAAAGAGAACAA+TGG 0.663283 2.2:-3964308 MS.gene052020:CDS
GTTATCAAGACCAACAGACA+GGG 0.665338 2.2:+3970681 None:intergenic
AGAATCACATATAAGTAGCG+AGG 0.674734 2.2:-3970704 MS.gene052020:CDS
GCCCTAACTGCATCCACAGT+AGG 0.676357 2.2:+3968580 None:intergenic
TACTGTAAGAGTTAAAGGAG+TGG 0.676898 2.2:-3961863 MS.gene052020:CDS
ACTGCTGCTCCACATCAACA+AGG 0.680622 2.2:+3972350 None:intergenic
TGCGATACAATTACACAGTG+TGG 0.681454 2.2:-3970499 MS.gene052020:CDS
GTGTTCCTAATATAGAGGGG+TGG 0.688067 2.2:-3972261 MS.gene052020:CDS
TGCGGTACAATCATGCAGTG+TGG 0.699609 2.2:-3969365 MS.gene052020:CDS
AAACTTTCATAGCTTCAAAG+GGG 0.703519 2.2:-3963496 MS.gene052020:CDS
CTTAATCAGAAAGAGAACAA+CGG 0.713656 2.2:-3969767 MS.gene052020:CDS
CTTAATCAGAAAGAGAACAA+CGG 0.713656 2.2:-3970334 MS.gene052020:CDS
GAAGTGTTCCTAATATAGAG+GGG 0.718089 2.2:-3972264 MS.gene052020:CDS
GTGGAAGTACTCGACAACTG+AGG 0.732838 2.2:+3971034 None:intergenic
CTTAATCAGAAAGAGGACAA+CGG 0.738632 2.2:-3969389 MS.gene052020:CDS
GTGGAAGTACTCGACAACTG+AGG 0.740853 2.2:+3964709 None:intergenic
TGATTCTGTCAAGAAAGACG+AGG 0.743036 2.2:-3969723 MS.gene052020:CDS
TGATTCTGTCAAGAAAGACG+AGG 0.743036 2.2:-3970290 MS.gene052020:CDS
TGGTTCTGTCAAGAAAGACG+AGG 0.753667 2.2:-3970479 MS.gene052020:CDS
CTTGATCAGAAAGAGAACAG+CGG 0.754686 2.2:-3969236 MS.gene052020:CDS
GCTGCCGCTCCACATCAACG+AGG 0.812823 2.2:+3967274 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.2 gene 3961729 3974086 3961729 ID=MS.gene052020
chr2.2 mRNA 3961729 3974086 3961729 ID=MS.gene052020.t1;Parent=MS.gene052020
chr2.2 exon 3973964 3974086 3973964 ID=MS.gene052020.t1.exon1;Parent=MS.gene052020.t1
chr2.2 CDS 3973964 3974086 3973964 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3971978 3972521 3971978 ID=MS.gene052020.t1.exon2;Parent=MS.gene052020.t1
chr2.2 CDS 3971978 3972521 3971978 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3971438 3971588 3971438 ID=MS.gene052020.t1.exon3;Parent=MS.gene052020.t1
chr2.2 CDS 3971438 3971588 3971438 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3970993 3971103 3970993 ID=MS.gene052020.t1.exon4;Parent=MS.gene052020.t1
chr2.2 CDS 3970993 3971103 3970993 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3969040 3970795 3969040 ID=MS.gene052020.t1.exon5;Parent=MS.gene052020.t1
chr2.2 CDS 3969040 3970795 3969040 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3968486 3968809 3968486 ID=MS.gene052020.t1.exon6;Parent=MS.gene052020.t1
chr2.2 CDS 3968486 3968809 3968486 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3966929 3967451 3966929 ID=MS.gene052020.t1.exon7;Parent=MS.gene052020.t1
chr2.2 CDS 3966929 3967451 3966929 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3966412 3966562 3966412 ID=MS.gene052020.t1.exon8;Parent=MS.gene052020.t1
chr2.2 CDS 3966412 3966562 3966412 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3964668 3964778 3964668 ID=MS.gene052020.t1.exon9;Parent=MS.gene052020.t1
chr2.2 CDS 3964668 3964778 3964668 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3964187 3964472 3964187 ID=MS.gene052020.t1.exon10;Parent=MS.gene052020.t1
chr2.2 CDS 3964187 3964472 3964187 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3963442 3963678 3963442 ID=MS.gene052020.t1.exon11;Parent=MS.gene052020.t1
chr2.2 CDS 3963442 3963678 3963442 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3963222 3963291 3963222 ID=MS.gene052020.t1.exon12;Parent=MS.gene052020.t1
chr2.2 CDS 3963222 3963291 3963222 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3962536 3962708 3962536 ID=MS.gene052020.t1.exon13;Parent=MS.gene052020.t1
chr2.2 CDS 3962536 3962708 3962536 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3962032 3962098 3962032 ID=MS.gene052020.t1.exon14;Parent=MS.gene052020.t1
chr2.2 CDS 3962032 3962098 3962032 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
chr2.2 exon 3961729 3961898 3961729 ID=MS.gene052020.t1.exon15;Parent=MS.gene052020.t1
chr2.2 CDS 3961729 3961898 3961729 ID=cds.MS.gene052020.t1;Parent=MS.gene052020.t1
Gene Sequence

>MS.gene052020

ATGGGTGTATCAGATGTGTGTCCTACTGTGGATGCAATTAGGGCATTTCTTGAACATTTGGTTGATCCAATGCTGGCAGAAATACCTATTCTGGATTATCCTCCACTATCACAACAGCAGAAAGTTGCAAAACAGGTTTTTTTTATTTTTTATTTTTTTATTTATCTTGAAACTTTTGTTATGGCAATTCAAAGTTTAATTAACATCTAGGTGATTATTGATAGAGTTAAATCATATTTAGTTAGTTTGTTAATAATTAGTTTGTGGTCAATTTCTGTGGACTAGTTCATATAGAGTTAGCTCTGCTTTGGCTTTAAATGGGTCCCGTTAGTGCACAGTGGGATGTTAGTGCACGGTGGGATTGATCTCCTTAGACCGGATATCGAGTTTTCAAAAGAAAAATAATAAAAAATAATAATAATTTGAGTAAGTTAGTTTGTTATTAGGTTCTAGTTGTGAGTTGTTAGAGATAGTTAGGTGAATATTTAAGGAACAATTGCATGTGTGGTCCTTTAAGTTTAACCTTCATTTCGTGTTGGTCTTTAAGTTTAATTTTTTCCAAATTGGTTCTTTATGATACATTTTGTTTTCACAGTTAGCCTTTAGGTTATCTTCCCGTTGCATTATAGTCATTGTTTTAGGTTCGTAAATTTTAACCATTCCTTCTAAATGAAGACATTGTTGCGAACAATGAGATACTGGGGTTTTAATGTTTTTGGATTTGAGAATTTAGATTTAAGTGAGAGGAGAATGGATTTGGACATGTTTGACATGTCTATATAAATTTTCTCAAAATTAAAATGTCATACCTGCTTCATTTTAACAGAACTTGTTAAGAAGGCTAGAAGTGAGTATATAACGTAACATAAAAGACCAATTCGGGAAAATAAAAACTTAAAGGACCAATCCGGGAAAAAAGGTTAGACTTAAAGGACTGCAGATGTAATTTTTCCTATATTTAACTAGTGTGTAGTTTTTCTTTTCCTTTTTCTGATGCAACTTGTGTGCAGTTGGTACTATATATAGATGTGATGTAAAGTGTAAGATACACAAGTCCCACAAGTGAATCATTTGAGAAATATAGTTTACAGTTTTAGTTTTTCCTTTTTAAGTGTTTTAACTCAAAGTGTGTGTTCATTCTTATTATAGTTACAACAATGATTTGGAACTGATTTTGGTTGGCCCTTATGGATAATGTTTTGCCACATATGCCAATGTAGATGAAAAATGTTGTAATATTGATAATTTCTTATCACCAACTATTCTTATGTTCTTTTAATGAGGCATTTCACATGATATCTCTGAGTTAGGGGTTGTGTAGCAGTAAGTCAGATTCATAAATAAACCGAATCACCATTTTCCTTCATGCATGTAAATTGCTATAGTAAAATGTGTCTTCCATATTATTTACTAAAATTATCTTTTGAACTTTTGGGGCTAGTATCCTTCTGGTATGTTTAAGTTTGTCTCAATGCAATTCTTAAAAAAAAAAATAATAATTGAAGTTCCTATTTGATTTTAAAGTTCAAGAACCACTAGTATTAAGTTGCATGATTATGGTGTAGGTGCATGCTGTTGTGTTACTGTACAACTATTACCACAGAAAACAGAATCCAGAGCTAGAATTTGTGGCATTTAGTGAATTTTGCAAGTTGATTGTGGATCTGAGACCAGCTTTGTTACCGTATATGAAATTCACACAGAAGCCTGTTGACCTTGTTGATGTGGAGCAGCAGTTGTCATTAACAGAAAAAGCAATCGTGAGTTCCTATGATATATGTACACTTTTAGACGCGTCAAGAAGTGTTCCTAATATAGAGGGGTGGCCCATTTCAAAAGTTGCCGTCCTTTTGGTCGATAGTAAGAAGGAGAACTGCTTCTTGCATTTTGGTTCTATCACTGATGGGGTACGGTCATTGATTGAAAAAGAAGTGGATACCTCCAATAAAATTTCTGAAGTTACCACCTCCAGTAAAATTTCTGAAGTTACAAGTGAAATCAAAACATACAAAAAAAGAAGAGTCGTTAAGAAGCCTTCGAGAAACGGATCAAATGTTGATGAAGATCGAATTTTGCAAGCTGGATATTCTGCTGTTAAGGAAGCTGCGGGTAATTATCCTTCTTCTACAGAAAGATTGCAATAGCTATTGTTAGCAACTATAGTACTTTAGTTTTAAGTGTATTTGTAAGTTATTATCTCCTTTTTTATTTTTCCAATTTATTTAACCTGGTAAAGATGTCCACATGACAATATGAAATATCACGCTGTATACTTTACGTTATCTATATATTTTGAGGTTAATATCAGAACATACTTTGTTCTTCCTTATTTTTCTGTATAGTAAATAGTTTTTTCTCTATTAAATTCTTCTTGTAGCATCTTGTGTTTTGATTTAATATATCATTATTTCTTAATTTATCTTTTAACAGGAGTTTTTTATTCATAAAAGTCGAATACTATTCTGGTATCAATATTTCTTATTTCACCTTATGAACAGGTGTCAATAGTATTGATATTATGCTTTTGGAAAGTTACACTGTGTATTCCCAGAGCAAAGAGAAGACAGCTTCACGCTTTTATATAATGAAGTGCTCACAGTCGATCAGTGAAGGGTTTACTCAAGTTCCTATCAAAGATTTAACTGAAAGGTTCGTTACAATTGGTATGGTTTTCCTATTGGCTGATCACTGTCTCAAGGGTGAATTGCGTAACTGTGTCCGGTTTTTCCATTGATGCGAAGAAAAGGTTTCGTTTTTGTTTCATCCATTCAGTTAGATTAATTTTCCCTTGTCCAAAGAAAAGTCGAATATACATTGTTTGCATACCAGGAATTGTCTTCACTTCTAAATCTAGTTATAAACTTTTTTTATGAATCTGTACATGTTGACTTATAAACATCCATTTTGATAGTCATTTTATATCTGATTGTTAACAAACTTGTGTCTGCTTCTCGTTGACATTTTATATCTCATCTTTGGATAGCGTCCGGGGTCCTTTGGTCAAAAGAAGTTCTGGCAGTTGGACGATCACCTCAGTTGTCGAGTACTTCCACATGCTTCCTTATTCCAAAATAATCTCAGAATGGATTTCTAGGTTGGTATAATTCTACTTTCCCTTTTTCTGATGCCCAATTTAGATTGATTTACAATAATGAATTCTGACCTCATAATTAAAGCCTTGGAAACATAACATAGATTTCCTCAAATTATTTCTCATTTCCATTTTATGCTCTCTTTTGCCCATCTTTCCATAAGATAATGATGGCTATTTGCATATTATGTTCTTTGTAGAGAAACATTCTCAAGTAGTTTGCAAGATTCAAAGCTGGCTGATAAACAATTCCCGAAGCTTGAAGTTACAGAATCACATATAAGTAGCGAGGCCCTGTCTGTTGGTCTTGATAACAAGCCATGCAGCGAAACTATTGTAACTCTTAATCAGAAGCAACTCCCGAAGCTTGAAGTTAAAGAAATTCATGTAAGTAGCGAGGGCATGTCTGCTGGTCTTGATAACAAGCCATGCAGTGATACTATTGTAACTCTTAATCAGAAAGAGAAGAACGGCTGCGATACAATTACACAGTGTGGTTCTGTCAAGAAAGACGAGGATATGGATGTGGATAACTCTTCAAGAAAGAAAACAAATCTTGAAGTTACAGAAGCACATGCAAGTAGTGAGGGCATGCCTGTTGGTCTTGATAACAAGCCATGCAGTGATACTATCGCAGCTCTTAATCAGAAAGAGAACAACGGTTGCGGTACAATTACACAGTGTGATTCTGTCAAGAAAGACGAGGATAGGGATGTGGATAACTCTTCAACAAAGAAAACAAATCTTGAAGTTACAGAATCACATGTAAGTAGTGAGGGCATGTCTGTTGGTCTTGATAACAAGCCATGCAGTGATACTATTGTAACTCTTAATCAAAAAGAGAAGAACGGCTGCGGTACAATTACTCAGTGTGGTTCTGTCAAGAAAGATCATGATATGGATGTGGATAACTGTTCAACAAAGAAAACAAATCTTGAAGTTACAGAATCACATGTAAGTAGCGAGGGCATGTCTGTTGGTCTTGATAACAAGCCATGCAATGATACCATTGCAGCTCTTAATCAGAAAGAGGACAACGATTGCGGTACAATCACGCAGTGTGGTTCGGTCAAGAAAGACCATGATATGGATGTGAATAACTCTTCAAGAAAGAAAACAAATCTTGAAGTTACAGAATCACATGTAAGTAGTGAGGGCATGTCTGTTGGTCTTGATAACAAGCCATGCAGTGATACTATTGCAGCTCTTAATCAGAAAGAGAACAACGGTTGCGGTACAATTACACAGTGTGATTCTGTCAAGAAAGACGAGGATATGGATGTGGATAACTCTTCAACAAAGAAAACAAATCTTGAAGTTGCAGAATCACATGTAAGTAGCGAGGGCATGTCTGTTGGTCTTGATAACAAGCCATGCAGTGATACTATTGTAACTCTTGATCAAAAAGAGAAGAACGGCTGCGGTACAATTACTCAGTGTGGTTCTGTCAAGAAAGATCATGGTATGGATGTGGATAACTGTTCAACAAAGAAAACAAATCTTGAAGTTACAGAATCACATGTAAGTAGCGAGGGCATGTCTGTTGGTCTTGATAACAAGCCATGCAGTGATACTATTGCAGCTCTTAATCAGAAAGAGGACAACGGTTGCGGTACAATCATGCAGTGTGGTTCGGTCAAGAAAGACCATGATATGGATGTGGATAACTCATCAAGAAAGAAAACAAATCTTCAAGTTTCAGAATCACATGTAAGTAGAGAGGTCATGGCTGTTGGTCTTGATCAGAAAGAGAACAGCGGTTGCAATAAAATTACACAGTGTAGTTCTGTCAAGGAAGACCAGGATATGGATGTGGACAACTCTTCAACTTTTCCATCTAAACTCAAAGAAGAATACCAGAAGCATATTGCCAATACTTTACAAGTTAATGAAGAACAAAAGATAGAAAATTCATCGGTGCAACATCACTCAAATGAATGTACAAGACCTAGCGAGGTTTGAAGTTTATCTTATCTCAAAATACTATTGTATATGTTTTAGACTATTTTTTGTATTAAGTAAACTCTTACCAGTGGAGTCTATAGAACTGCTAAAGTACATAGACTCTAGACTCGAGTTTTTACTATTTCCTTTGCTGTTGAGATGGATTTTTCTTAAAAAATCAGTTTCGAGGCTTTTCTAATACATATCATCTCCCATCTAACTACATGCCATTGGATTGGCAGGCTGAGAAGGTTGTTTCAACAAGGATGCACATTACTGAGGGTGGAATCAAAGATGAATCTGCTTTTGATAAGATTTGTGCTGATGCCACGGTTGAAAACGAATCCAAAGAAAAATGTACCCTGATTGCAGATAATTTCAACACAGATTTTGAGAAAGTTCAAAGTTTCATAGCTTCGAAGAGGAAGATGGGTCGATCTGATGTGTGTCCTACTGTGGATGCAGTTAGGGCATTCGTTGAACACTTGGTTGATCCAATGCTGCCAGCAAAGGCTTCTAGCCGTGATGCACCTCCAATATCTCAACAGCAGAAAGTTGCAAAACAGGTTTCTTCATTCATCTTTCTTGACCCTTTTGTTATAGCAATCCAAAGATTAACGCCTAGGTCATTATTTGAAATGATTTAGACCATTTTTTTGTTCAATATTGTTATTATTCTCTGCTTGGAGTGTTATGGATTAATAACAATACTTGCAACCAATGAGAACAACCAAAACCGTTAACATAAGAACGCAATTAACCAACCAACCAAAACCAGAAAATAAACCACTAACCAACAGTAACAAATAAGAGAGAAGGAAGAAGATAGCACCTAGAATTTACGTGGCTCAGCCTTACAGATCTGCTACAGGGAAGAGAGCACAAAACAATTTCACCATGATGAGGAACAATATAACAATCCCATGCCATAGAGTTTTCCCTTGGCCCCTTGCAATACCTTGATCTCTCAATCTTTCTAATCTTTACACAATGTAGAAAATTTACATGAAACACTTCACACTATGATTACCCCTTAGTATAGTGGCATTCCCTAGCTATACAAAAATTTCAAATCTTTAAACAACTTGGTGTCCCTGCCTCACTAGATTTGACCTGCTTCACTTAAGAGGAGGTAGGCTTAAGATTAATTTTTTTTTAGGTATAATCCTGTAAAAAATAGAGGCAAATTTTTCTTGAATGTGCTTGAATTCTTCACACCCAGCAACATGCTTGCTTAATTTATATGGATGGTAATTACAATGATAGAAAATGAAAGATGCAATTTACTAGGGAACAATTAAGTTAGCACTACTTCCTAAGATACACTGAAGTTGTTCTACTTGATATTTTGGAAATGAAACATTAAAGTGGTCTTCGAAGTAGGGAACGTGAAACATTAATTGGTTTTTGTTTCCAACAATCCCTTTTAATTAAAACCTTGTCTCGAGAAAATGTTTTGCCACATATGGCAATGTAGATGAAAAGTGTTGTGATATTGATCATTTCTCTTCGCCGAGTCTTGTTCTGCACTTTTTAATGAGGAGTTTTACATTATATGATACCTCGTTATTCATTATTTGATCAGTGTTCTTCATATCAGGTGCATTCTGTTGTGTTACTGTACAACTATTACCACAGAAAACAGCATCCAGAGCTAGAATTTGTGGCATTTAAGGACTTTTGCAAGTTGATTGTGGGTCTGAGACCAGCGTTGTTAATATATATGAAATTCACGCAAAACCCTGATCAAACTGACCTCGTTGATGTGGAGCGGCAGCTTTCATTAACAGAAAAAGCGATAGCTAGTTCGTGTGATATATGTACATGTTTAGATGCGTCAAAAAATGTTCCAGATATAGAGGGATGGCCCATTTCAAAAGTTGCAATCCTTTTAGTCGACAGTAAGAAGGAGAACTGCTTGTTGCGTTTTTGTTCCACCACTGATGGGGTATGGTCAGTGATCGAAAAAGACGTGGATTCTTCCGATCAAGTTTCTGAAGATACAAATGGGCTCAAACATACATACAAAAAGAGAAGAGTCATTCAGAATCCTACAAAAAACGGATTAAATGTTGATGATGAATTTTTGCTAGTTGGTTATTCTGCTGTAAAGGAAGCTACCGGTAATCATCCTTCTTCTACAGAAATTTTGCCATAGCTATTATTAGAAACTATAGTTTTTTAGTTTAATTTACTTGTAGTTAAAATCACAGGTCAGGGTACATTCTCCCGTGTCAGTTTTTTCTCTTTTCCTTTTAAGTTTTCCAATTATGCTGTATACTTCTCTTATGTTTTCCATATATTTCGAGGTTAATATCCGATACATAATTTGTTATTCTTTATTTTCTGCATAATAAACAGCTTTTCTCTATTAAAATGTTACTGTAGTATATTGCATTTCGAGTTAATCTATCATTATCTCGTAATTTATGTTTTAACTGGTGTTTTTGATTGATAAACGTCGAATATGATTCTTGTATGCAATACAGGTGTCAATAGTATTGATATTATGCTTTTGGAAAGTTACACTGTGTATTCGGAAAGCAAAGAGAAGACAGCTTCACGCTTTTATATAATGAAGTGCTCACAGTCGACAGCTGATGGGTCTATTCAAGTTCCTATCAAAGATTTAATTGAAAGGTTCGTTGTAATTGGTATGGTTTTGCAATTGGCTGATGACTCATATCTCAAGAGTGAATTTGCATAGCTGTGACAAGCTTTTCCATTGATAGGATAAAAAGTTGCCTTTTTTCATCCATTCAGTTTGATTAATTTTCCCTTGTCGCCGAAAAGTCAAGTATACTTTGTTTGCATACCAAGAATTGTTTTCACTTCTAAATCAAGTTATCAACTTTTTATGAATTTGTTTGGATAGCTACCTATTCGCCAGAATGTTACATTCTGATCATAAGACTGTTTGTTCTGGGCTTTAGACAATATATGATTGTATAATGATCTACTTGGAAAGCTGACCTACACGATCTTATTTATCATGGAGTGGTACTTGTAATTCAATACTTTAATATGAAAATTGCTGTTGACACATTGCATAAGGCTGTGACACACCAGTAATTTACCTAAATACCCCTTCGGTAGTTAACTGTCGAGAAAAAATAAACCCGGCTGTAGTTAACTACCGAGGAAAACCTCGGTAGTTAACTACCGAGGAAAATGAAAACTCAAATTATCATCATCATCTTCCTTGGTTTACTGGTATTTTGGTTCAATTCATTCCCTTCACAATCCATTTGTTCCTTGTTCCTGCAACTAATTTTTGTTCCTCGTTGCATTAAAAAAAACGAAAGTTAACAAATCTGTTGGGTTCTTCTGAATGCTTTCAAATACTCTGAACCATCTTAAATTCCAATTCTTCTAGTTTATGTGATTATTACATTTTTATGGGGTTTCGATTTTTGCAATTCGTGCTTCACTTCTCAAAACCCAAACACTCTCTTCCCAAATTACATCAACGTTTCTTATCGCTACAAAATTCTTCAAACTTTGATGAACGCCTCATTCTCCATCAAATCTCCCAACTTTTACCAATACCCACTTCCAAAACCCCAGAATCACAATCAGAATCCAAATCCGTTGATGGGTTTTTGTCCCCTGAAGTTAATAGATTGGAGGAGAAGAAAGTGAAATAGAAAAAAAAAATGAAAATTGACAAGTAAACCAAGGAAGATGATGATGATAATTTGAGTTTTCATTTTCCTCGGTAGTTAACTACCGAGGTTTTCCTCGGTAGTTAACTGCAGCCGGGTTTATTTTTCCTCGGCAGTTAACTACCGAAGGGGTATTTAGGTAAATTACTGGTGTGTCACAGCCTTATGCAATGTGTCAACAACAATTTTCCTTTAATATTTGCCCGGTTCTTGTAAAATAGTAAATCTGATTGTTAACCAATACAAAATTGTAATTTGATTATTCTCGAGAGCTTTTAGCTGCTCTGCTATAACTGTTTTTTTCTCAATTCTGTTAGAATGAATTCAATTCAGTTACATGAAGGAGGTGGGTCTATTTATAGATTGATCCTAACTGCCTCTAGCAGACTGACACATGTCAGTCAGCTTTCCCTAGATGACTGGCAGTTGCCAGTTAATTCAGTTAGGCAGTTACAGGTTGTTAGGGAAGTTACAAGGGATATAATCTAGTGTGGTGTAATCTATCATGATCATTATGTTCGCTTGCTATCTATTCTAGAGTCATTCCTTCAATATTAACAAACTCCGTGTTTGCTTCTCCATAACATTTTATATTTATCTTTTGATAGCTTCCGGGGTCCTTTACTCAAAAAGAGTTCTAGCAGTTGGACGATCACCTCAGTTGTCGAGTACTTCCACGTGCTTCCTTATTCCGAAATAATCTCAGACTGGATTTCTAGGTTGGTGTAATTCACCTTTCCCTTTTCTGATTCCCGATTTAGATCGATTTACAGTAATGAATTCTGAACTCATGATTAGAAGTCTTAGAAACATAACATATTTCCTCAAATTATTTCTCATTTCCATTTTATGTTTTCTTTGGAACCTCTTTCTGTAAGATAAGGATGATTATTTGTGTAAAATTTTCTTTGTAGAGAAACATTCTCAAATAGTTTGCAAGATTCAAAGCTGGCAGAGAAACAATTCCCAAAGCATGAAGTGACAGAATCACATGTAAGTAGTAAGGGCTTGTATATTGATCTTGATAACAAGCCAGGAAGTGATACTAAAGTAGCTCTTAATCAGAAAGAGAACAATGGTTGTGGTATAACTATACGGTGTGATTCTGTCAAGGAAGACTGGGATATGGATGTGGACAAGTCTTTAGTTTTACCATCTAAAAGTAAAGAATGTCAGAAGCATAGTGCCAATACTTTACAGGTAAGTGAAGATCAAAAGATAGAAAATCCATCGGTGCAACACCACTCAAATGAATGTACAAGACCTAGCAAGGTTTGAAGTTCATCTTTTCTCAAACTACTTTGTTTATTACCTTCCTTCTTCTGACTTCAGTTGATGTTTTATTGCTAGAGTTGAAAAGTGTTCATTGATGTGATTTGACAAGTTATATGTTGAATATGCACCCCGCACATAGTATTAAATAATGTTTAGATTCTATGGTTGATGTTTTAAACAATATTTTTATTGTACCAAGTAAACTCCTACTAGTAGAGGTTTTGATTATTTCCTTTGTTGTCGAGTCGTGATGGCTCTTAGTTAGAGAATATAGTTTCTTGCCCTCTCTCTTGAAGGAGGTTCCCCTACTTCTACGTTGCCTTTTTTGCTAAGAAATTTTTTTCTTAAAAGAAAAGCACTTTCAAAGCTTTTCCAATATTTATTTACATATATAGATTATCTCTAATCCAGCTACACGACATTGGATTGCCAGGCTGAGAAGGTTGTTTCAAAAAGAAAGCACATCACTGAGGGTGGAATCAAAGATCAATCTGCTTTTGATAAAATTTGTGCCGGTACCACTTTTGAAAATGATTCAGTAGAAAAATGTACCCTGAATGCAAATAGTTCCAACACAAATCTTGAGAAGATCCAAACTTTCATAGCTTCAAAGGGGACGATACTGTCACAAACTGCTCTCAATGCTCTTATACGAAAGAGGAATGGACTGGTAAAAGCCTCTTATAATCAATAATGTTGAATTACAGTCAAAACTTATATGCTTCTGTGTTATATATTTGTACTGCTATTGTCATCAATTATTCGACCTGTTTATTTTATGGACCTTTACATTTATCTAAGATTATGTTTCTTTGAGCAGGCTCTTCAGCAGCGCGCGATAGAGGATGAGATGGCTGTGTGTAATATGAAAATTCAGAGATGGTTAGCTGGTATGTTTCCTTTATTGGTTGTTTGTCATTACTTCTAATTTTGCTTCTCTTCTGCATTCTTCTATCTATAAGGTTTTTCCCCTTATGATAGATTTGTGGTCTGGCATAAATGGTACTGGTTTATTTACGTGATTATTAACTTCTTATAGACATTTACTCCCATCTCGCTGTCACTCCAAATTGTTAAATTTTTTTTTGCCAGTATTTGGATTTCATAAATTTAACTAGCACATTTTATCCTTGAACCGAATCTAAAGCTGCTTTGAGAATCTTGAATTTTCAATATGAAAATGATGTATTAATGACCACAAATTTCTTTTTCCGTTTCACCAGAAGATTATATCTGCATGGTGCCAACTAAATGCGATATTTTTCTGTTGTGCAATATGGAATACCGATAATTTTTTAAATTAACTGACTTGTGTGAATTGATTTATTCCTCTACACTACCATTTATATATCGACCATGTGAAGATGAAAACAAATTATTGTTTGTGTTTTCTTGTCAAACAGGCGAGGAAGATGACTTTGAATTAAAGTTAGAATCCATTATAGAAGGCTGTAACGGTACATGGTTAAGAAATCAAGGAAGGATGTGTCAATATCTTGATGATCAATGCTTACCTCCATCTGTTAAGAGTAAAAGATTGACAGAGGCAGTGCTCACTTTGCAAAGTCCGTGCCAGGCAAGACATGTTCTTTATTAATACTTGCTTTAATTTTTGAGTAAAACAAGAGAAAATGAATACTTATTAATTTTATTTAGTTTTATAAATGCATAATCCGGCGAATGTTGCTATTTTATTGGAAGCATATTACTAGAAGAGTACAGCAATGTAGGATAAATATTTAGTATGGGAAACATGTATACAAGTCCAATGATCAAGAGGATATATAATAAGAAGAAACAATAATTTAAACTGTGAGAAAAAAGTATATAAAATGTTTTAAGAGGCCATAAGCAACTTATCAAGTGGAGTTGTGGTGTGGAATGATGCCAAAGGTATCAATTCTTGTGATTTTATGCTGCCGAATGCATCTTTTTAAAGAAATGTAGTTTGACACATTATTAATTTCCCTTCATCTTTGTATAAGTACTTGAAAATTCTGTTTGATCTTGCAGGAACTAGATGGAATATGTCATGAAAATAATTGGATCCTACCAACTTATAGTGTATCTCTATCAGATGGTAAGACTACCTAACTAAGGTTGCTTGTACAATGCACCATTAGCAGCATGCAATTCTGGCTCAGTTGTAGAATGACATATTTTATTGATCATACATCTTACGATTTGTTATATTTGGTAATTAACTTTTGAAGGTGAATTTCAAGCTACTGTAAGAGTTAAAGGAGTGGACTTTGAGTATTCGTGCGAGGGAAATGCATGCTCCTTTCCTCGCGAAGCAAGAGATTCAGCTGCTGCTCAAATGTTGACCAAATTTAGAAGTGTGGCAAAAAATCAGCCCTCTAATTTTGGCTCTTGTGCTTGA

Protein sequence

>MS.gene052020.t1

MGVSDVCPTVDAIRAFLEHLVDPMLAEIPILDYPPLSQQQKVHAVVLLYNYYHRKQNPELEFVAFSEFCKLIVDLRPALLPYMKFTQKPVDLVDVEQQLSLTEKAIVSSYDICTLLDASRSVPNIEGWPISKVAVLLVDSKKENCFLHFGSITDGVRSLIEKEVDTSNKISEVTTSSKISEVTSEIKTYKKRRVVKKPSRNGSNVDEDRILQAGYSAVKEAAGVNSIDIMLLESYTVYSQSKEKTASRFYIMKCSQSISEGFTQVPIKDLTESVRGPLVKRSSGSWTITSVVEYFHMLPYSKIISEWISRETFSSSLQDSKLADKQFPKLEVTESHISSEALSVGLDNKPCSETIVTLNQKQLPKLEVKEIHVSSEGMSAGLDNKPCSDTIVTLNQKEKNGCDTITQCGSVKKDEDMDVDNSSRKKTNLEVTEAHASSEGMPVGLDNKPCSDTIAALNQKENNGCGTITQCDSVKKDEDRDVDNSSTKKTNLEVTESHVSSEGMSVGLDNKPCSDTIVTLNQKEKNGCGTITQCGSVKKDHDMDVDNCSTKKTNLEVTESHVSSEGMSVGLDNKPCNDTIAALNQKEDNDCGTITQCGSVKKDHDMDVNNSSRKKTNLEVTESHVSSEGMSVGLDNKPCSDTIAALNQKENNGCGTITQCDSVKKDEDMDVDNSSTKKTNLEVAESHVSSEGMSVGLDNKPCSDTIVTLDQKEKNGCGTITQCGSVKKDHGMDVDNCSTKKTNLEVTESHVSSEGMSVGLDNKPCSDTIAALNQKEDNGCGTIMQCGSVKKDHDMDVDNSSRKKTNLQVSESHVSREVMAVGLDQKENSGCNKITQCSSVKEDQDMDVDNSSTFPSKLKEEYQKHIANTLQVNEEQKIENSSVQHHSNECTRPSEAEKVVSTRMHITEGGIKDESAFDKICADATVENESKEKCTLIADNFNTDFEKVQSFIASKRKMGRSDVCPTVDAVRAFVEHLVDPMLPAKASSRDAPPISQQQKVAKQVHSVVLLYNYYHRKQHPELEFVAFKDFCKLIVGLRPALLIYMKFTQNPDQTDLVDVERQLSLTEKAIASSCDICTCLDASKNVPDIEGWPISKVAILLVDSKKENCLLRFCSTTDGVWSVIEKDVDSSDQVSEDTNGLKHTYKKRRVIQNPTKNGLNVDDEFLLVGYSAVKEATGVNSIDIMLLESYTVYSESKEKTASRFYIMKCSQSTADGSIQVPIKDLIESFRGPLLKKSSSSWTITSVVEYFHVLPYSEIISDWISRETFSNSLQDSKLAEKQFPKHEVTESHVSSKGLYIDLDNKPGSDTKVALNQKENNGCGITIRCDSVKEDWDMDVDKSLVLPSKSKECQKHSANTLQAEKVVSKRKHITEGGIKDQSAFDKICAGTTFENDSVEKCTLNANSSNTNLEKIQTFIASKGTILSQTALNALIRKRNGLALQQRAIEDEMAVCNMKIQRWLAGEEDDFELKLESIIEGCNGTWLRNQGRMCQYLDDQCLPPSVKSKRLTEAVLTLQSPCQELDGICHENNWILPTYSVSLSDGEFQATVRVKGVDFEYSCEGNACSFPREARDSAAAQMLTKFRSVAKNQPSNFGSCA