Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90265.t1 | XP_003608343.1 | 98.6 | 283 | 4 | 0 | 1 | 283 | 1 | 283 | 1.90E-165 | 591.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90265.t1 | Q9FGF0 | 76.2 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 2.7e-125 | 449.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90265.t1 | G7JU06 | 98.6 | 283 | 4 | 0 | 1 | 283 | 1 | 283 | 1.3e-165 | 591.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053623 | MS.gene90265 | 0.931181 | 5.52E-94 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90265.t1 | MTR_4g092840 | 98.587 | 283 | 4 | 0 | 1 | 283 | 1 | 283 | 0.0 | 582 |
| MS.gene90265.t1 | MTR_4g092840 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 9.37e-175 | 482 |
| MS.gene90265.t1 | MTR_3g111310 | 69.258 | 283 | 85 | 2 | 1 | 282 | 1 | 282 | 1.90e-146 | 412 |
| MS.gene90265.t1 | MTR_3g111310 | 69.258 | 283 | 85 | 2 | 1 | 282 | 51 | 332 | 4.42e-146 | 413 |
| MS.gene90265.t1 | MTR_5g067240 | 66.545 | 275 | 90 | 2 | 1 | 275 | 39 | 311 | 1.75e-137 | 390 |
| MS.gene90265.t1 | MTR_5g067240 | 63.212 | 193 | 69 | 2 | 1 | 193 | 39 | 229 | 7.41e-90 | 266 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90265.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene90265.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene90265.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene90265.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene90265.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene90265.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene90265.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene90265.t1 | AT5G64460 | 76.033 | 242 | 55 | 2 | 40 | 279 | 1 | 241 | 4.06e-135 | 382 |
| MS.gene90265.t1 | AT5G64460 | 76.033 | 242 | 55 | 2 | 40 | 279 | 1 | 241 | 4.06e-135 | 382 |
| MS.gene90265.t1 | AT5G64460 | 76.033 | 242 | 55 | 2 | 40 | 279 | 1 | 241 | 4.06e-135 | 382 |
| MS.gene90265.t1 | AT1G58280 | 65.580 | 276 | 94 | 1 | 1 | 276 | 43 | 317 | 1.92e-133 | 380 |
| MS.gene90265.t1 | AT1G58280 | 65.580 | 276 | 94 | 1 | 1 | 276 | 28 | 302 | 3.30e-133 | 379 |
| MS.gene90265.t1 | AT2G17280 | 67.041 | 267 | 86 | 2 | 6 | 271 | 5 | 270 | 4.37e-133 | 378 |
| MS.gene90265.t1 | AT2G17280 | 67.041 | 267 | 86 | 2 | 6 | 271 | 5 | 270 | 4.37e-133 | 378 |
| MS.gene90265.t1 | AT1G58280 | 67.164 | 268 | 87 | 1 | 9 | 276 | 35 | 301 | 1.08e-132 | 378 |
| MS.gene90265.t1 | AT1G58280 | 60.133 | 301 | 94 | 2 | 1 | 276 | 43 | 342 | 3.45e-127 | 365 |
| MS.gene90265.t1 | AT5G64460 | 77.000 | 200 | 43 | 2 | 82 | 279 | 1 | 199 | 4.45e-112 | 322 |
| MS.gene90265.t1 | AT1G09935 | 49.180 | 244 | 103 | 1 | 9 | 252 | 6 | 228 | 5.13e-82 | 247 |
| MS.gene90265.t1 | AT1G09935 | 48.760 | 242 | 103 | 1 | 9 | 250 | 6 | 226 | 2.28e-81 | 245 |
| MS.gene90265.t1 | AT1G09932 | 41.975 | 243 | 126 | 1 | 16 | 258 | 17 | 244 | 1.77e-67 | 211 |
| MS.gene90265.t1 | AT1G09932 | 43.103 | 232 | 117 | 1 | 16 | 247 | 17 | 233 | 2.78e-67 | 209 |
| MS.gene90265.t1 | AT1G09932 | 41.176 | 238 | 125 | 1 | 21 | 258 | 15 | 237 | 4.96e-64 | 202 |
| MS.gene90265.t1 | AT1G09932 | 37.449 | 243 | 112 | 2 | 16 | 258 | 17 | 219 | 1.58e-50 | 166 |
Find 74 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACAGCTGTTGGGGTATT+TGG | 0.191261 | 4.2:-20267527 | MS.gene90265:CDS |
| AGCAATATGGATTGCGTTGC+CGG | 0.276019 | 4.2:-20270070 | None:intergenic |
| TTTCACACTCTAACTACATT+TGG | 0.307340 | 4.2:-20265187 | MS.gene90265:CDS |
| CGAACTTTGCCGTGAACATT+TGG | 0.328841 | 4.2:-20267390 | MS.gene90265:intron |
| AACGGATGTGCTGCCTCTTA+TGG | 0.353393 | 4.2:-20267480 | MS.gene90265:CDS |
| CGTAAACATGTTCGTTCCTC+TGG | 0.353503 | 4.2:-20269884 | MS.gene90265:CDS |
| GGATGAAAATGTCGAGAAAC+AGG | 0.364230 | 4.2:-20264665 | MS.gene90265:CDS |
| CCTGCATTTGCCACCATAAG+AGG | 0.370940 | 4.2:+20267467 | None:intergenic |
| GATGCTCATCTCACTCCTCT+TGG | 0.375412 | 4.2:-20269929 | MS.gene90265:CDS |
| CACTCCTCTTGGATGGGAAC+AGG | 0.403646 | 4.2:-20269918 | MS.gene90265:CDS |
| GGACTTTGCAAACAGCTGTT+GGG | 0.407826 | 4.2:-20267535 | MS.gene90265:CDS |
| AAAGGAGGAACTGGCAGCTA+GGG | 0.425635 | 4.2:-20266349 | MS.gene90265:CDS |
| TATCCAGGCAAGATACCTTC+AGG | 0.427271 | 4.2:-20264712 | MS.gene90265:CDS |
| AATTGCCCACCAATTGTTGC+TGG | 0.429050 | 4.2:-20267413 | MS.gene90265:CDS |
| CAAAGTTCGCCAGCAACAAT+TGG | 0.431400 | 4.2:+20267404 | None:intergenic |
| TGTTGGGGTATTTGGTGGGG+AGG | 0.433278 | 4.2:-20267519 | MS.gene90265:CDS |
| AGATGAGCATCAAAATAATC+AGG | 0.437848 | 4.2:+20269941 | None:intergenic |
| CAAAGGAGGAACTGGCAGCT+AGG | 0.439691 | 4.2:-20266350 | MS.gene90265:CDS |
| AGGACTTTGCAAACAGCTGT+TGG | 0.439773 | 4.2:-20267536 | MS.gene90265:CDS |
| GATATTTCTTTCTTCACCAA+GGG | 0.440479 | 4.2:+20265151 | None:intergenic |
| GGAGGAACTGGCAGCTAGGG+GGG | 0.440908 | 4.2:-20266346 | MS.gene90265:CDS |
| CCTCTTATGGTGGCAAATGC+AGG | 0.448697 | 4.2:-20267467 | MS.gene90265:CDS |
| AAGAGAGACAAAGGAGGAAC+TGG | 0.456446 | 4.2:-20266358 | MS.gene90265:CDS |
| CAGCTGTTGGGGTATTTGGT+GGG | 0.460056 | 4.2:-20267523 | MS.gene90265:CDS |
| CATGGAGCGAAGCTCACAAT+TGG | 0.460292 | 4.2:+20264869 | None:intergenic |
| CTCATCTCACTCCTCTTGGA+TGG | 0.475264 | 4.2:-20269925 | MS.gene90265:CDS |
| GTTGGGGTATTTGGTGGGGA+GGG | 0.478766 | 4.2:-20267518 | MS.gene90265:CDS |
| AGCCCTGAAGGTATCTTGCC+TGG | 0.483296 | 4.2:+20264709 | None:intergenic |
| CAATTGTGAGCTTCGCTCCA+TGG | 0.485079 | 4.2:-20264868 | MS.gene90265:CDS |
| ACAGCTGTTGGGGTATTTGG+TGG | 0.489900 | 4.2:-20267524 | MS.gene90265:CDS |
| GGATATTTCTTTCTTCACCA+AGG | 0.490934 | 4.2:+20265150 | None:intergenic |
| GGATAATGTAAGAGAGACAA+AGG | 0.493248 | 4.2:-20266367 | MS.gene90265:CDS |
| TAGACAGTGATGAGGATGTT+TGG | 0.508871 | 4.2:-20266395 | MS.gene90265:CDS |
| AGGCAAGATACCTTCAGGGC+TGG | 0.510044 | 4.2:-20264707 | MS.gene90265:CDS |
| CTAGGCTTGTCCAGCCCTGA+AGG | 0.512267 | 4.2:+20264697 | None:intergenic |
| TCCAATTAATACCTCATCAA+AGG | 0.521069 | 4.2:+20269827 | None:intergenic |
| GGGATACACTGATGATAAAA+CGG | 0.532332 | 4.2:-20267498 | MS.gene90265:CDS |
| ATCCAGGCAAGATACCTTCA+GGG | 0.537040 | 4.2:-20264711 | MS.gene90265:CDS |
| GCATCAACAACTAACTATCC+AGG | 0.537929 | 4.2:-20264727 | MS.gene90265:CDS |
| ATTTGCGTACCAAATGTTCA+CGG | 0.540428 | 4.2:+20267381 | None:intergenic |
| AGTTCGCCAGCAACAATTGG+TGG | 0.541305 | 4.2:+20267407 | None:intergenic |
| TGGAAATGATTGCCACCCCT+TGG | 0.547988 | 4.2:-20265167 | MS.gene90265:CDS |
| ATGAAAATGTCGAGAAACAG+GGG | 0.561938 | 4.2:-20264663 | MS.gene90265:CDS |
| TCCCTTGAGCGTGTCTCACA+AGG | 0.562690 | 4.2:+20270008 | None:intergenic |
| TCATCTCACTCCTCTTGGAT+GGG | 0.565857 | 4.2:-20269924 | MS.gene90265:CDS |
| AGCTGTTGGGGTATTTGGTG+GGG | 0.570094 | 4.2:-20267522 | MS.gene90265:CDS |
| GCTTCGCTCCATGGTCCTTG+TGG | 0.578334 | 4.2:-20264859 | MS.gene90265:CDS |
| CAAGGGATCCACAATGTGGA+AGG | 0.581062 | 4.2:-20269992 | MS.gene90265:CDS |
| CTTTCTATCCACAAGGACCA+TGG | 0.586011 | 4.2:+20264851 | None:intergenic |
| ACAGTGATGAGGATGTTTGG+TGG | 0.587514 | 4.2:-20266392 | MS.gene90265:CDS |
| GACTTTGCAAACAGCTGTTG+GGG | 0.588956 | 4.2:-20267534 | MS.gene90265:CDS |
| GGACAAGCCTAGTGATGCTG+TGG | 0.593967 | 4.2:-20264686 | MS.gene90265:CDS |
| TAACGGAAACAAACACGAGC+CGG | 0.596669 | 4.2:+20270051 | None:intergenic |
| TCATCGCTTCTCCTTTGATG+AGG | 0.598983 | 4.2:-20269838 | MS.gene90265:intron |
| CACCTTGTGAGACACGCTCA+AGG | 0.601658 | 4.2:-20270010 | MS.gene90265:CDS |
| AGGAGGAACTGGCAGCTAGG+GGG | 0.601826 | 4.2:-20266347 | MS.gene90265:CDS |
| GATGAAAATGTCGAGAAACA+GGG | 0.608952 | 4.2:-20264664 | MS.gene90265:CDS |
| TTTCTTTCTTCACCAAGGGG+TGG | 0.614051 | 4.2:+20265155 | None:intergenic |
| AAGGAGGAACTGGCAGCTAG+GGG | 0.614949 | 4.2:-20266348 | MS.gene90265:CDS |
| TGATGAGGATGTTTGGTGGA+AGG | 0.616744 | 4.2:-20266388 | MS.gene90265:CDS |
| GATCTTGTTAATTAATCCAG+AGG | 0.617260 | 4.2:+20269868 | None:intergenic |
| AATGCAGGAAATAGCTTCCG+TGG | 0.617766 | 4.2:-20267452 | MS.gene90265:CDS |
| ACCTTGTGAGACACGCTCAA+GGG | 0.620665 | 4.2:-20270009 | MS.gene90265:CDS |
| ATATTTCTTTCTTCACCAAG+GGG | 0.623337 | 4.2:+20265152 | None:intergenic |
| GTTCGCCAGCAACAATTGGT+GGG | 0.629718 | 4.2:+20267408 | None:intergenic |
| ATACTCACTTTCTATCCACA+AGG | 0.636262 | 4.2:+20264844 | None:intergenic |
| CGCTCAAGGGATCCACAATG+TGG | 0.645094 | 4.2:-20269996 | MS.gene90265:CDS |
| GGATGTGCTGCCTCTTATGG+TGG | 0.662408 | 4.2:-20267477 | MS.gene90265:CDS |
| GTTTCAGATAGACAGTGATG+AGG | 0.665843 | 4.2:-20266403 | MS.gene90265:intron |
| TAATGTAAGAGAGACAAAGG+AGG | 0.671000 | 4.2:-20266364 | MS.gene90265:CDS |
| TCAACCTGTTCCCATCCAAG+AGG | 0.684422 | 4.2:+20269914 | None:intergenic |
| ATAGCGATTGTGACACACAG+TGG | 0.725382 | 4.2:-20265217 | MS.gene90265:CDS |
| TGAAAATGTCGAGAAACAGG+GGG | 0.746521 | 4.2:-20264662 | MS.gene90265:CDS |
| TATGACTTGAAATTGCACCA+CGG | 0.752320 | 4.2:+20267435 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATTAATGATATATGT+TGG | + | chr4.2:20268534-20268553 | None:intergenic | 10.0% |
| !! | TGTATATAAATTAGTAATAA+AGG | - | chr4.2:20267901-20267920 | MS.gene90265:intron | 10.0% |
| !!! | ATTTGTTTAATTTATGTTTT+TGG | - | chr4.2:20269950-20269969 | MS.gene90265:CDS | 10.0% |
| !!! | TAATTGTTTCATATATATTT+TGG | - | chr4.2:20267158-20267177 | MS.gene90265:intron | 10.0% |
| !!! | TATTATTTTCCATATTTAAA+TGG | + | chr4.2:20266929-20266948 | None:intergenic | 10.0% |
| !! | AAATTAGTAATAAAGGAAAA+AGG | - | chr4.2:20267908-20267927 | MS.gene90265:intron | 15.0% |
| !! | AATAAAGTAATGTAAAATAG+GGG | + | chr4.2:20268820-20268839 | None:intergenic | 15.0% |
| !! | ACATTAAATGAAAAATATGA+TGG | + | chr4.2:20266525-20266544 | None:intergenic | 15.0% |
| !! | GAATAAAGTAATGTAAAATA+GGG | + | chr4.2:20268821-20268840 | None:intergenic | 15.0% |
| !! | GATTGAAAAAAAAAAAAGAA+AGG | - | chr4.2:20265915-20265934 | MS.gene90265:intron | 15.0% |
| !!! | ATAGAGTTTATATTTTGAAA+GGG | + | chr4.2:20269922-20269941 | None:intergenic | 15.0% |
| !!! | GTTTGAATTTTATGAAAATA+TGG | - | chr4.2:20266545-20266564 | MS.gene90265:intron | 15.0% |
| !!! | TATTTTTCATATTAAAATGG+TGG | + | chr4.2:20266121-20266140 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTCATTTTCAAA+CGG | - | chr4.2:20268563-20268582 | MS.gene90265:intron | 15.0% |
| !!! | TTTTTTTTTTTCAATCAACA+TGG | + | chr4.2:20265911-20265930 | None:intergenic | 15.0% |
| !! | AAAACTAGATTGAAAAAACA+AGG | + | chr4.2:20266966-20266985 | None:intergenic | 20.0% |
| !! | AGAGACTAATATAAACATAA+AGG | + | chr4.2:20268288-20268307 | None:intergenic | 20.0% |
| !! | AGGAAATAAAAAATACAACA+GGG | + | chr4.2:20267048-20267067 | None:intergenic | 20.0% |
| !! | GAACCAAAAAAAAATGTTAA+AGG | - | chr4.2:20268467-20268486 | MS.gene90265:intron | 20.0% |
| !! | GATTATTAGAACTGATATAT+TGG | - | chr4.2:20269337-20269356 | MS.gene90265:intron | 20.0% |
| !! | GGAATAAAGTAATGTAAAAT+AGG | + | chr4.2:20268822-20268841 | None:intergenic | 20.0% |
| !! | TAGAAATAAAAAACACAACA+AGG | + | chr4.2:20266249-20266268 | None:intergenic | 20.0% |
| !! | TTGAATGAAAAAGAAAGAAA+AGG | - | chr4.2:20266719-20266738 | MS.gene90265:intron | 20.0% |
| !!! | AAGTAAATGATTGACTTATT+TGG | - | chr4.2:20269811-20269830 | MS.gene90265:intron | 20.0% |
| !!! | AGCCTATTTTTCATTTAATT+GGG | - | chr4.2:20265076-20265095 | MS.gene90265:intron | 20.0% |
| !!! | ATTTTCCATATTTAAATGGT+GGG | + | chr4.2:20266925-20266944 | None:intergenic | 20.0% |
| !!! | ATTTTGCTATCAAATTCTTT+TGG | + | chr4.2:20267633-20267652 | None:intergenic | 20.0% |
| !!! | GATAGAGTTTATATTTTGAA+AGG | + | chr4.2:20269923-20269942 | None:intergenic | 20.0% |
| !!! | TATTTTCCATATTTAAATGG+TGG | + | chr4.2:20266926-20266945 | None:intergenic | 20.0% |
| !!! | TGCTTTACATTCTTTAATTT+GGG | - | chr4.2:20269709-20269728 | MS.gene90265:intron | 20.0% |
| !!! | TTGATATTAACATTGACTTA+TGG | - | chr4.2:20268031-20268050 | MS.gene90265:intron | 20.0% |
| !!! | TTTAATTTGAAAGTTGACTT+TGG | - | chr4.2:20266401-20266420 | MS.gene90265:intron | 20.0% |
| !!! | TTTTGCTATCAAATTCTTTT+GGG | + | chr4.2:20267632-20267651 | None:intergenic | 20.0% |
| ! | AAAAATAACAACGAAAAAGC+TGG | - | chr4.2:20268618-20268637 | MS.gene90265:intron | 25.0% |
| ! | AAAATGTGGAGAAAATTGTA+AGG | + | chr4.2:20268064-20268083 | None:intergenic | 25.0% |
| ! | AAATTATCTTCCACCATTAT+TGG | + | chr4.2:20269190-20269209 | None:intergenic | 25.0% |
| ! | ACAAACTAACATACTAACAT+TGG | + | chr4.2:20265491-20265510 | None:intergenic | 25.0% |
| ! | ATAAAAAACACAACAAGGAT+AGG | + | chr4.2:20266244-20266263 | None:intergenic | 25.0% |
| ! | ATATTCCAATCTACTAATGA+AGG | + | chr4.2:20265223-20265242 | None:intergenic | 25.0% |
| ! | ATCTACTATGAATAATCAGT+AGG | - | chr4.2:20267768-20267787 | MS.gene90265:intron | 25.0% |
| ! | ATTTCCTCAGGATTAAATTT+GGG | - | chr4.2:20267061-20267080 | MS.gene90265:intron | 25.0% |
| ! | CAATGTTAATATCAAGACTA+AGG | + | chr4.2:20268026-20268045 | None:intergenic | 25.0% |
| ! | CAATTTAGTAACAGAAATTG+TGG | + | chr4.2:20265391-20265410 | None:intergenic | 25.0% |
| ! | CATCTAAATTCCAATTAGTT+TGG | + | chr4.2:20266486-20266505 | None:intergenic | 25.0% |
| ! | CCAAAAAAAAATGTTAAAGG+TGG | - | chr4.2:20268470-20268489 | MS.gene90265:intron | 25.0% |
| ! | CTTCAACTAATGAAAATAAC+TGG | + | chr4.2:20269378-20269397 | None:intergenic | 25.0% |
| ! | GAGGAAATAAAAAATACAAC+AGG | + | chr4.2:20267049-20267068 | None:intergenic | 25.0% |
| ! | GGAAAATGAAAGATGTTAAT+AGG | + | chr4.2:20266100-20266119 | None:intergenic | 25.0% |
| ! | GTGCTTTACATTCTTTAATT+TGG | - | chr4.2:20269708-20269727 | MS.gene90265:intron | 25.0% |
| ! | TAACGTGTATTATACAAGAT+TGG | + | chr4.2:20265807-20265826 | None:intergenic | 25.0% |
| ! | TAAGTACATGTTAACATTGT+GGG | + | chr4.2:20265607-20265626 | None:intergenic | 25.0% |
| ! | TATCTTGACAGTTAAAAGAT+TGG | + | chr4.2:20267485-20267504 | None:intergenic | 25.0% |
| ! | TATTCCAATCTACTAATGAA+GGG | + | chr4.2:20265222-20265241 | None:intergenic | 25.0% |
| ! | TATTTCCTCAGGATTAAATT+TGG | - | chr4.2:20267060-20267079 | MS.gene90265:intron | 25.0% |
| ! | TCAAAAGTTAGTCATTTCAA+TGG | - | chr4.2:20266576-20266595 | MS.gene90265:CDS | 25.0% |
| ! | TGAAGATTCATGTAGTTATA+TGG | - | chr4.2:20269393-20269412 | MS.gene90265:intron | 25.0% |
| ! | TGATGCTTAATCATTACTTT+CGG | + | chr4.2:20266008-20266027 | None:intergenic | 25.0% |
| ! | TTAAGTACATGTTAACATTG+TGG | + | chr4.2:20265608-20265627 | None:intergenic | 25.0% |
| ! | TTATCTTCTATGAGCAAATA+GGG | - | chr4.2:20267998-20268017 | MS.gene90265:intron | 25.0% |
| ! | TTTAGCATTTCAAATTAACC+AGG | - | chr4.2:20265890-20265909 | MS.gene90265:intron | 25.0% |
| ! | TTTATCTTCTATGAGCAAAT+AGG | - | chr4.2:20267997-20268016 | MS.gene90265:intron | 25.0% |
| !! | ACTTCTGTTAATTTTGTAGT+TGG | + | chr4.2:20267978-20267997 | None:intergenic | 25.0% |
| !! | AGTAAACAACATTGTTACTT+TGG | + | chr4.2:20265763-20265782 | None:intergenic | 25.0% |
| !! | TAGGAAAAATATAGAAGTGT+AGG | + | chr4.2:20266886-20266905 | None:intergenic | 25.0% |
| !! | TGACAATAAATTTAAAGCTC+AGG | - | chr4.2:20267878-20267897 | MS.gene90265:intron | 25.0% |
| !! | TGATGCTTAATCATTACTTT+TGG | + | chr4.2:20266008-20266027 | None:intergenic | 25.0% |
| !!! | AAGCAATAGAATCTTTTTTC+TGG | + | chr4.2:20269419-20269438 | None:intergenic | 25.0% |
| !!! | ATCTAGTTTTAACAAGAGAA+AGG | - | chr4.2:20266976-20266995 | MS.gene90265:intron | 25.0% |
| !!! | CAGCCTATTTTTCATTTAAT+TGG | - | chr4.2:20265075-20265094 | MS.gene90265:intron | 25.0% |
| !!! | CCACCTTTAACATTTTTTTT+TGG | + | chr4.2:20268473-20268492 | None:intergenic | 25.0% |
| !!! | CGGTACTTTTAAGTTTTAAA+TGG | + | chr4.2:20267735-20267754 | None:intergenic | 25.0% |
| !!! | GAACATATTTTTACCTGTTT+CGG | - | chr4.2:20267372-20267391 | MS.gene90265:intron | 25.0% |
| !!! | GTAAACAACATTGTTACTTT+GGG | + | chr4.2:20265762-20265781 | None:intergenic | 25.0% |
| !!! | GTTGTATTTTTTATTTCCTC+AGG | - | chr4.2:20267049-20267068 | MS.gene90265:intron | 25.0% |
| !!! | TTAACATTGACTTATGGATA+TGG | - | chr4.2:20268037-20268056 | MS.gene90265:intron | 25.0% |
| !!! | TTCATATATATTTTGGCTTC+AGG | - | chr4.2:20267165-20267184 | MS.gene90265:intron | 25.0% |
| !!! | TTTTTTTTTAACTCGGTATC+CGG | + | chr4.2:20265154-20265173 | None:intergenic | 25.0% |
| AAAAATCAACAGCAGGAAAA+AGG | + | chr4.2:20268145-20268164 | None:intergenic | 30.0% | |
| AAGCCATCGTTTAATTATTG+GGG | - | chr4.2:20269242-20269261 | MS.gene90265:intron | 30.0% | |
| AAGGTTATATGAAATGTGTG+TGG | - | chr4.2:20265181-20265200 | MS.gene90265:CDS | 30.0% | |
| AAGTGTATACTATCACTCTT+TGG | - | chr4.2:20268774-20268793 | MS.gene90265:intron | 30.0% | |
| AATAAATCTTGAGTACCTTC+AGG | + | chr4.2:20267089-20267108 | None:intergenic | 30.0% | |
| ACTATGAATAATCAGTAGGA+TGG | - | chr4.2:20267772-20267791 | MS.gene90265:intron | 30.0% | |
| ACTGTTTAGCAATTTCATGT+AGG | - | chr4.2:20265416-20265435 | MS.gene90265:intron | 30.0% | |
| ACTTTGTTAATACTCAGGAA+TGG | - | chr4.2:20268445-20268464 | MS.gene90265:intron | 30.0% | |
| AGATGAGCATCAAAATAATC+AGG | + | chr4.2:20264783-20264802 | None:intergenic | 30.0% | |
| ATATTTCTTTCTTCACCAAG+GGG | + | chr4.2:20269572-20269591 | None:intergenic | 30.0% | |
| ATTACTTTCGGCAACAAAAA+GGG | + | chr4.2:20265996-20266015 | None:intergenic | 30.0% | |
| CAAGCCATCGTTTAATTATT+GGG | - | chr4.2:20269241-20269260 | MS.gene90265:intron | 30.0% | |
| CATGTGAGAAACACTAAAAT+TGG | - | chr4.2:20268858-20268877 | MS.gene90265:intron | 30.0% | |
| CATTTCCCACCATTTAAATA+TGG | - | chr4.2:20266917-20266936 | MS.gene90265:intron | 30.0% | |
| GATATTTCTTTCTTCACCAA+GGG | + | chr4.2:20269573-20269592 | None:intergenic | 30.0% | |
| GATCTTGTTAATTAATCCAG+AGG | + | chr4.2:20264856-20264875 | None:intergenic | 30.0% | |
| GCGAAAAATTTCAATGCTTA+CGG | + | chr4.2:20265328-20265347 | None:intergenic | 30.0% | |
| GGAACATATTCCAAACTAAT+TGG | - | chr4.2:20266473-20266492 | MS.gene90265:intron | 30.0% | |
| GGCCCAATTAAATGAAAAAT+AGG | + | chr4.2:20265081-20265100 | None:intergenic | 30.0% | |
| GTAATTCACAGTTAATTGAC+CGG | - | chr4.2:20267600-20267619 | MS.gene90265:intron | 30.0% | |
| GTCAATTAACTGTGAATTAC+AGG | + | chr4.2:20267600-20267619 | None:intergenic | 30.0% | |
| TAAAGGCAACAGTTAAATGT+TGG | + | chr4.2:20268271-20268290 | None:intergenic | 30.0% | |
| TAATTCACAGTTAATTGACC+GGG | - | chr4.2:20267601-20267620 | MS.gene90265:intron | 30.0% | |
| TACTCTATTGTGACCAATAA+TGG | - | chr4.2:20269174-20269193 | MS.gene90265:intron | 30.0% | |
| TATTCCCTTCATTAGTAGAT+TGG | - | chr4.2:20265215-20265234 | MS.gene90265:CDS | 30.0% | |
| TCATTTCTTTCGCTGTATTA+AGG | - | chr4.2:20268241-20268260 | MS.gene90265:intron | 30.0% | |
| TCCAATTAATACCTCATCAA+AGG | + | chr4.2:20264897-20264916 | None:intergenic | 30.0% | |
| TGTACTTAACATCTCATATC+TGG | - | chr4.2:20265619-20265638 | MS.gene90265:intron | 30.0% | |
| TTACTGTTGTTCTTTCCATA+CGG | - | chr4.2:20266038-20266057 | MS.gene90265:intron | 30.0% | |
| TTAGTCATTTCAATGGTTGA+CGG | - | chr4.2:20266583-20266602 | MS.gene90265:CDS | 30.0% | |
| TTGCTATATCTAGTAAGCTT+GGG | + | chr4.2:20269124-20269143 | None:intergenic | 30.0% | |
| TTGGAAAGAGTCATACATAT+TGG | + | chr4.2:20269045-20269064 | None:intergenic | 30.0% | |
| TTTCACACTCTAACTACATT+TGG | - | chr4.2:20269534-20269553 | MS.gene90265:intron | 30.0% | |
| ! | ATAATTTTGTAACTGCGTTG+AGG | - | chr4.2:20267121-20267140 | MS.gene90265:intron | 30.0% |
| ! | TAGGAAAAGAATAGAAGTGT+AGG | + | chr4.2:20266081-20266100 | None:intergenic | 30.0% |
| ! | TCCTTTGATGAGGTATTAAT+TGG | - | chr4.2:20264893-20264912 | MS.gene90265:intron | 30.0% |
| ! | TCTAGTCTTTAACAAGAGAA+AGG | - | chr4.2:20266172-20266191 | MS.gene90265:intron | 30.0% |
| ! | TCTGCAATCAACATTTTTGT+AGG | - | chr4.2:20266204-20266223 | MS.gene90265:intron | 30.0% |
| !! | AATTTTTCGCAGTCATTTTC+CGG | - | chr4.2:20265338-20265357 | MS.gene90265:intron | 30.0% |
| !! | ATTACTTTTGGCAGCAAAAA+GGG | + | chr4.2:20266800-20266819 | None:intergenic | 30.0% |
| !! | CAGTATCGAACAAATTTTAC+AGG | - | chr4.2:20267815-20267834 | MS.gene90265:intron | 30.0% |
| !! | GTTAGTTTGTTAGTAGTTGT+TGG | - | chr4.2:20265501-20265520 | MS.gene90265:intron | 30.0% |
| !! | TCTTTCTTTTTCATTCAACC+TGG | + | chr4.2:20266717-20266736 | None:intergenic | 30.0% |
| !!! | AAATTCTTTTGGGTTTATCC+CGG | + | chr4.2:20267622-20267641 | None:intergenic | 30.0% |
| !!! | TACATATTGGCTGTTGATTT+TGG | + | chr4.2:20269032-20269051 | None:intergenic | 30.0% |
| !!! | TGTTTTTGGTTCAGTATGAT+AGG | - | chr4.2:20269964-20269983 | MS.gene90265:CDS | 30.0% |
| AACAAGTTCAATCCTCATCT+TGG | - | chr4.2:20267432-20267451 | MS.gene90265:CDS | 35.0% | |
| ACAAGTTCAATCCTCATCTT+GGG | - | chr4.2:20267433-20267452 | MS.gene90265:CDS | 35.0% | |
| AGCCATCGTTTAATTATTGG+GGG | - | chr4.2:20269243-20269262 | MS.gene90265:intron | 35.0% | |
| AGCGAGTAACACAAAAACAT+AGG | + | chr4.2:20266312-20266331 | None:intergenic | 35.0% | |
| AGTGGAGTGATAACTGATAA+GGG | + | chr4.2:20265551-20265570 | None:intergenic | 35.0% | |
| ATACGAATGCAATAACCGTA+TGG | + | chr4.2:20266860-20266879 | None:intergenic | 35.0% | |
| ATACTCACTTTCTATCCACA+AGG | + | chr4.2:20269880-20269899 | None:intergenic | 35.0% | |
| ATCACTCTTTGGTTGTTTGT+GGG | - | chr4.2:20268785-20268804 | MS.gene90265:intron | 35.0% | |
| ATCATAAACCACAAGCATTC+AGG | + | chr4.2:20268195-20268214 | None:intergenic | 35.0% | |
| ATGAAAATGTCGAGAAACAG+GGG | - | chr4.2:20270058-20270077 | MS.gene90265:CDS | 35.0% | |
| ATGTTAACATTGTGGGATGT+AGG | + | chr4.2:20265600-20265619 | None:intergenic | 35.0% | |
| ATTTGCGTACCAAATGTTCA+CGG | + | chr4.2:20267343-20267362 | None:intergenic | 35.0% | |
| CAAAGCAATGATGTCAAACA+AGG | + | chr4.2:20265301-20265320 | None:intergenic | 35.0% | |
| CATTACTTTCGGCAACAAAA+AGG | + | chr4.2:20265997-20266016 | None:intergenic | 35.0% | |
| CCAAGACTTTGTTAATACTC+AGG | - | chr4.2:20268440-20268459 | MS.gene90265:intron | 35.0% | |
| CCTGAGTATTAACAAAGTCT+TGG | + | chr4.2:20268443-20268462 | None:intergenic | 35.0% | |
| CGAAACACAAATTACTAGGT+CGG | + | chr4.2:20269626-20269645 | None:intergenic | 35.0% | |
| CTGAAAAGTAAGATTGCAAC+TGG | + | chr4.2:20267526-20267545 | None:intergenic | 35.0% | |
| GAAGCGAAACACAAATTACT+AGG | + | chr4.2:20269630-20269649 | None:intergenic | 35.0% | |
| GAGTATTAACAAAGTCTTGG+AGG | + | chr4.2:20268440-20268459 | None:intergenic | 35.0% | |
| GATGAAAATGTCGAGAAACA+GGG | - | chr4.2:20270057-20270076 | MS.gene90265:CDS | 35.0% | |
| GCAAGCCATCGTTTAATTAT+TGG | - | chr4.2:20269240-20269259 | MS.gene90265:intron | 35.0% | |
| GGATAATGTAAGAGAGACAA+AGG | - | chr4.2:20268354-20268373 | MS.gene90265:intron | 35.0% | |
| GGATATTTCTTTCTTCACCA+AGG | + | chr4.2:20269574-20269593 | None:intergenic | 35.0% | |
| GGATGAGATCTTATACAATC+AGG | + | chr4.2:20268923-20268942 | None:intergenic | 35.0% | |
| GGGAAATGAAAGATGGTAAT+AGG | + | chr4.2:20266905-20266924 | None:intergenic | 35.0% | |
| GGGATACACTGATGATAAAA+CGG | - | chr4.2:20267223-20267242 | MS.gene90265:intron | 35.0% | |
| GTTTATGTTACATTGTCGTG+TGG | - | chr4.2:20266270-20266289 | MS.gene90265:intron | 35.0% | |
| TAACCGTATGGATAGAAGAA+CGG | + | chr4.2:20266848-20266867 | None:intergenic | 35.0% | |
| TAATGTAAGAGAGACAAAGG+AGG | - | chr4.2:20268357-20268376 | MS.gene90265:intron | 35.0% | |
| TATCACTCTTTGGTTGTTTG+TGG | - | chr4.2:20268784-20268803 | MS.gene90265:intron | 35.0% | |
| TATGACTTGAAATTGCACCA+CGG | + | chr4.2:20267289-20267308 | None:intergenic | 35.0% | |
| TATGTATGACTCTTTCCAAC+AGG | - | chr4.2:20269046-20269065 | MS.gene90265:intron | 35.0% | |
| TCTATTGTGACCAATAATGG+TGG | - | chr4.2:20269177-20269196 | MS.gene90265:intron | 35.0% | |
| TCTCACATGCAGTATTTACA+GGG | + | chr4.2:20268847-20268866 | None:intergenic | 35.0% | |
| TGTTAACATTGTGGGATGTA+GGG | + | chr4.2:20265599-20265618 | None:intergenic | 35.0% | |
| TTACCGTTCTTCTATCCATA+CGG | - | chr4.2:20266842-20266861 | MS.gene90265:intron | 35.0% | |
| TTCTCACATGCAGTATTTAC+AGG | + | chr4.2:20268848-20268867 | None:intergenic | 35.0% | |
| ! | AAATGGTGGGAAATGAAAGA+TGG | + | chr4.2:20266912-20266931 | None:intergenic | 35.0% |
| ! | AACACTTCTTCTTTTGTCAC+AGG | + | chr4.2:20268108-20268127 | None:intergenic | 35.0% |
| ! | ACACTTCTTCTTTTGTCACA+GGG | + | chr4.2:20268107-20268126 | None:intergenic | 35.0% |
| ! | ATCGTTTTGCAACGATGTAA+CGG | + | chr4.2:20264690-20264709 | None:intergenic | 35.0% |
| ! | CTTGCTATATCTAGTAAGCT+TGG | + | chr4.2:20269125-20269144 | None:intergenic | 35.0% |
| ! | GATTAAATTTGGGATCCTGA+AGG | - | chr4.2:20267071-20267090 | MS.gene90265:intron | 35.0% |
| !! | AGTTTGTTAGTAGTTGTTGG+AGG | - | chr4.2:20265504-20265523 | MS.gene90265:intron | 35.0% |
| !! | CAGTTGCAATCTTACTTTTC+AGG | - | chr4.2:20267524-20267543 | MS.gene90265:CDS | 35.0% |
| !! | CATTACTTTTGGCAGCAAAA+AGG | + | chr4.2:20266801-20266820 | None:intergenic | 35.0% |
| !! | CTTACTTTTCAGGAGGATTA+GGG | - | chr4.2:20267534-20267553 | MS.gene90265:CDS | 35.0% |
| !! | TAAAAGTACCGTGCATCATA+GGG | - | chr4.2:20267744-20267763 | MS.gene90265:intron | 35.0% |
| !! | TCTGTTTTTCACTTGAACTC+AGG | - | chr4.2:20269457-20269476 | MS.gene90265:intron | 35.0% |
| !! | TCTTACTTTTCAGGAGGATT+AGG | - | chr4.2:20267533-20267552 | MS.gene90265:CDS | 35.0% |
| !! | TTAAAAGTACCGTGCATCAT+AGG | - | chr4.2:20267743-20267762 | MS.gene90265:intron | 35.0% |
| !! | TTACTTTTCAGGAGGATTAG+GGG | - | chr4.2:20267535-20267554 | MS.gene90265:CDS | 35.0% |
| !! | TTGCAATCTTACTTTTCAGG+AGG | - | chr4.2:20267527-20267546 | MS.gene90265:CDS | 35.0% |
| !!! | GTTGATTTTGGTTGGATTGT+GGG | + | chr4.2:20269020-20269039 | None:intergenic | 35.0% |
| !!! | TATTGGCTGTTGATTTTGGT+TGG | + | chr4.2:20269028-20269047 | None:intergenic | 35.0% |
| !!! | TGTTGATTTTGGTTGGATTG+TGG | + | chr4.2:20269021-20269040 | None:intergenic | 35.0% |
| AAATTACTAGGTCGGAGGAA+CGG | + | chr4.2:20269618-20269637 | None:intergenic | 40.0% | |
| AACAAAGTCTTGGAGGTTTC+TGG | + | chr4.2:20268433-20268452 | None:intergenic | 40.0% | |
| AACACAAATTACTAGGTCGG+AGG | + | chr4.2:20269623-20269642 | None:intergenic | 40.0% | |
| AATGGTTTCCATACTCAGAC+TGG | + | chr4.2:20267717-20267736 | None:intergenic | 40.0% | |
| ACATGCAGTATTTACAGGGA+CGG | + | chr4.2:20268843-20268862 | None:intergenic | 40.0% | |
| ACATGGACGAAAGGAAGTAA+AGG | + | chr4.2:20268996-20269015 | None:intergenic | 40.0% | |
| ACGTCAAGACACATTTGTTC+CGG | + | chr4.2:20265360-20265379 | None:intergenic | 40.0% | |
| AGTAATCGACGTTGTTGTAG+GGG | - | chr4.2:20267010-20267029 | MS.gene90265:intron | 40.0% | |
| AGTCTCACCGATCAATAGTA+GGG | + | chr4.2:20265104-20265123 | None:intergenic | 40.0% | |
| ATACTTTCCCAGTCTGAGTA+TGG | - | chr4.2:20267706-20267725 | MS.gene90265:intron | 40.0% | |
| ATGACTCTTTCCAACAGGAA+GGG | - | chr4.2:20269051-20269070 | MS.gene90265:intron | 40.0% | |
| ATGGACGAAAGGAAGTAAAG+GGG | + | chr4.2:20268994-20269013 | None:intergenic | 40.0% | |
| ATGGTTTCCATACTCAGACT+GGG | + | chr4.2:20267716-20267735 | None:intergenic | 40.0% | |
| CACGAGTAATGCATATGCAT+AGG | + | chr4.2:20266367-20266386 | None:intergenic | 40.0% | |
| CAGTAATCGACGTTGTTGTA+GGG | - | chr4.2:20267009-20267028 | MS.gene90265:intron | 40.0% | |
| CATAACTACTCTTCCGAAAC+AGG | + | chr4.2:20267388-20267407 | None:intergenic | 40.0% | |
| CATGGACGAAAGGAAGTAAA+GGG | + | chr4.2:20268995-20269014 | None:intergenic | 40.0% | |
| GACCCCCAATAATTAAACGA+TGG | + | chr4.2:20269248-20269267 | None:intergenic | 40.0% | |
| GACGAGCAATACATAAACAC+AGG | + | chr4.2:20264988-20265007 | None:intergenic | 40.0% | |
| GAGCAATACATAAACACAGG+AGG | + | chr4.2:20264985-20265004 | None:intergenic | 40.0% | |
| GAGTGGAGTGATAACTGATA+AGG | + | chr4.2:20265552-20265571 | None:intergenic | 40.0% | |
| GCATCAACAACTAACTATCC+AGG | - | chr4.2:20269994-20270013 | MS.gene90265:CDS | 40.0% | |
| GGATCCCAAATTTAATCCTG+AGG | + | chr4.2:20267068-20267087 | None:intergenic | 40.0% | |
| GGATGAAAATGTCGAGAAAC+AGG | - | chr4.2:20270056-20270075 | MS.gene90265:CDS | 40.0% | |
| GTCACAATAGAGTACAGCAA+AGG | + | chr4.2:20269168-20269187 | None:intergenic | 40.0% | |
| GTTTCAGATAGACAGTGATG+AGG | - | chr4.2:20268318-20268337 | MS.gene90265:intron | 40.0% | |
| TACTAACACCGTGAGTCATT+CGG | - | chr4.2:20265779-20265798 | MS.gene90265:intron | 40.0% | |
| TAGACAGTGATGAGGATGTT+TGG | - | chr4.2:20268326-20268345 | MS.gene90265:intron | 40.0% | |
| TATGACTCTTTCCAACAGGA+AGG | - | chr4.2:20269050-20269069 | MS.gene90265:intron | 40.0% | |
| TATGCATTACTCGTGTTGTC+TGG | - | chr4.2:20266372-20266391 | MS.gene90265:CDS | 40.0% | |
| TATGTATTGCTCGTCCTTTG+TGG | - | chr4.2:20264993-20265012 | MS.gene90265:intron | 40.0% | |
| TCAGTAATCGACGTTGTTGT+AGG | - | chr4.2:20267008-20267027 | MS.gene90265:intron | 40.0% | |
| TGAAAATGTCGAGAAACAGG+GGG | - | chr4.2:20270059-20270078 | MS.gene90265:CDS | 40.0% | |
| TGATCACGCTAGTAGTCTTT+GGG | - | chr4.2:20266452-20266471 | MS.gene90265:intron | 40.0% | |
| TGTCAACTAGATTGCTTGCT+TGG | - | chr4.2:20265272-20265291 | MS.gene90265:intron | 40.0% | |
| TGTTTAACACCAACAGTTGC+AGG | + | chr4.2:20269743-20269762 | None:intergenic | 40.0% | |
| TTGATCACGCTAGTAGTCTT+TGG | - | chr4.2:20266451-20266470 | MS.gene90265:intron | 40.0% | |
| ! | GACTGATTCCCTGAATTTGT+CGG | - | chr4.2:20265120-20265139 | MS.gene90265:intron | 40.0% |
| ! | TCCACATTTTTCCTCATGCA+GGG | - | chr4.2:20268074-20268093 | MS.gene90265:intron | 40.0% |
| ! | TTCGCTTCTCTTGTTATGTG+AGG | - | chr4.2:20269642-20269661 | MS.gene90265:intron | 40.0% |
| ! | TTTCACTTGAACTCAGGTTG+TGG | - | chr4.2:20269463-20269482 | MS.gene90265:intron | 40.0% |
| ! | TTTTCATCCACAGCATCACT+AGG | + | chr4.2:20270045-20270064 | None:intergenic | 40.0% |
| ! | TTTTGTCTCCTTCCACATTG+TGG | + | chr4.2:20264740-20264759 | None:intergenic | 40.0% |
| !! | AAAAGTACCGTGCATCATAG+GGG | - | chr4.2:20267745-20267764 | MS.gene90265:intron | 40.0% |
| !!! | TCCTGCTGTTGATTTTTCAC+TGG | - | chr4.2:20268148-20268167 | MS.gene90265:intron | 40.0% |
| AAGAGAGACAAAGGAGGAAC+TGG | - | chr4.2:20268363-20268382 | MS.gene90265:intron | 45.0% | |
| AATCCTCATCTTGGGATGAC+AGG | - | chr4.2:20267441-20267460 | MS.gene90265:CDS | 45.0% | |
| AATGCAGGAAATAGCTTCCG+TGG | - | chr4.2:20267269-20267288 | MS.gene90265:intron | 45.0% | |
| AATTACTAGGTCGGAGGAAC+GGG | + | chr4.2:20269617-20269636 | None:intergenic | 45.0% | |
| AATTGCCCACCAATTGTTGC+TGG | - | chr4.2:20267308-20267327 | MS.gene90265:intron | 45.0% | |
| ACAGTGATGAGGATGTTTGG+TGG | - | chr4.2:20268329-20268348 | MS.gene90265:intron | 45.0% | |
| AGGACTTTGCAAACAGCTGT+TGG | - | chr4.2:20267185-20267204 | MS.gene90265:intron | 45.0% | |
| AGTAGATCCCCTATGATGCA+CGG | + | chr4.2:20267755-20267774 | None:intergenic | 45.0% | |
| ATAGCGATTGTGACACACAG+TGG | - | chr4.2:20269504-20269523 | MS.gene90265:intron | 45.0% | |
| ATCCAGGCAAGATACCTTCA+GGG | - | chr4.2:20270010-20270029 | MS.gene90265:CDS | 45.0% | |
| ATTGTGGGAACATGGACGAA+AGG | + | chr4.2:20269005-20269024 | None:intergenic | 45.0% | |
| CAAAGTTCGCCAGCAACAAT+TGG | + | chr4.2:20267320-20267339 | None:intergenic | 45.0% | |
| CACAATTGGCAAAGCTGCAA+AGG | + | chr4.2:20269841-20269860 | None:intergenic | 45.0% | |
| CAGTCTCACCGATCAATAGT+AGG | + | chr4.2:20265105-20265124 | None:intergenic | 45.0% | |
| CATACGAATGCAAGACCGTA+TGG | + | chr4.2:20266056-20266075 | None:intergenic | 45.0% | |
| CCTAAGAGCCGACAAATTCA+GGG | + | chr4.2:20265131-20265150 | None:intergenic | 45.0% | |
| CGAACTTTGCCGTGAACATT+TGG | - | chr4.2:20267331-20267350 | MS.gene90265:intron | 45.0% | |
| CGTAAACATGTTCGTTCCTC+TGG | - | chr4.2:20264837-20264856 | MS.gene90265:intron | 45.0% | |
| CTTTCTATCCACAAGGACCA+TGG | + | chr4.2:20269873-20269892 | None:intergenic | 45.0% | |
| GACGACGAATCTGACTTAGA+GGG | - | chr4.2:20269764-20269783 | MS.gene90265:intron | 45.0% | |
| GACTTTGCAAACAGCTGTTG+GGG | - | chr4.2:20267187-20267206 | MS.gene90265:intron | 45.0% | |
| GATCAAGTTCCTGCAACTGT+TGG | - | chr4.2:20269731-20269750 | MS.gene90265:intron | 45.0% | |
| GCCAGTGAAAAATCAACAGC+AGG | + | chr4.2:20268152-20268171 | None:intergenic | 45.0% | |
| GGACTTTGCAAACAGCTGTT+GGG | - | chr4.2:20267186-20267205 | MS.gene90265:intron | 45.0% | |
| GGAGTGATAACTGATAAGGG+TGG | + | chr4.2:20265548-20265567 | None:intergenic | 45.0% | |
| GTCTCACCGATCAATAGTAG+GGG | + | chr4.2:20265103-20265122 | None:intergenic | 45.0% | |
| TAACGGAAACAAACACGAGC+CGG | + | chr4.2:20264673-20264692 | None:intergenic | 45.0% | |
| TAACTGATAAGGGTGGTCTC+AGG | + | chr4.2:20265541-20265560 | None:intergenic | 45.0% | |
| TAAGATTGCAACTGGTGTGC+AGG | + | chr4.2:20267518-20267537 | None:intergenic | 45.0% | |
| TATCCAGGCAAGATACCTTC+AGG | - | chr4.2:20270009-20270028 | MS.gene90265:CDS | 45.0% | |
| TATTGCTCGTCCTTTGTGGT+TGG | - | chr4.2:20264997-20265016 | MS.gene90265:intron | 45.0% | |
| TCAACTTGGACCAACCACAA+AGG | + | chr4.2:20265010-20265029 | None:intergenic | 45.0% | |
| TCATCGCTTCTCCTTTGATG+AGG | - | chr4.2:20264883-20264902 | MS.gene90265:intron | 45.0% | |
| TCATCTCACTCCTCTTGGAT+GGG | - | chr4.2:20264797-20264816 | MS.gene90265:intron | 45.0% | |
| TCCATGCAGCAAAGTCAACT+TGG | + | chr4.2:20265024-20265043 | None:intergenic | 45.0% | |
| TCCCTGCATGAGGAAAAATG+TGG | + | chr4.2:20268078-20268097 | None:intergenic | 45.0% | |
| TCTCACCGATCAATAGTAGG+GGG | + | chr4.2:20265102-20265121 | None:intergenic | 45.0% | |
| TGACGACGAATCTGACTTAG+AGG | - | chr4.2:20269763-20269782 | MS.gene90265:intron | 45.0% | |
| TGGACGAAAGGAAGTAAAGG+GGG | + | chr4.2:20268993-20269012 | None:intergenic | 45.0% | |
| TTCAAGTGCCTGAATGCTTG+TGG | - | chr4.2:20268184-20268203 | MS.gene90265:intron | 45.0% | |
| TTGGTTGGATTGTGGGAACA+TGG | + | chr4.2:20269013-20269032 | None:intergenic | 45.0% | |
| TTTCTTTCTTCACCAAGGGG+TGG | + | chr4.2:20269569-20269588 | None:intergenic | 45.0% | |
| ! | ACTCAGACTGGGAAAGTATG+AGG | + | chr4.2:20267705-20267724 | None:intergenic | 45.0% |
| ! | ACTGGGAAAGTATGAGGTAC+AGG | + | chr4.2:20267699-20267718 | None:intergenic | 45.0% |
| ! | CAAACAGCTGTTGGGGTATT+TGG | - | chr4.2:20267194-20267213 | MS.gene90265:intron | 45.0% |
| ! | CTCCACATTTTTCCTCATGC+AGG | - | chr4.2:20268073-20268092 | MS.gene90265:intron | 45.0% |
| ! | GATTGGTACCGAATGACTCA+CGG | + | chr4.2:20265790-20265809 | None:intergenic | 45.0% |
| ! | GGTATTGAGAGCTTACTGCT+TGG | + | chr4.2:20269595-20269614 | None:intergenic | 45.0% |
| ! | TCCAAGTTGACTTTGCTGCA+TGG | - | chr4.2:20265020-20265039 | MS.gene90265:intron | 45.0% |
| ! | TGATGAGGATGTTTGGTGGA+AGG | - | chr4.2:20268333-20268352 | MS.gene90265:intron | 45.0% |
| !! | GTTAAAAAAAAAAAAAAAAA+AGG | - | chr4.2:20265162-20265181 | MS.gene90265:CDS | 5.0% |
| !!! | TAATATTTTTCATATTAAAA+TGG | + | chr4.2:20266124-20266143 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTAACT+CGG | + | chr4.2:20265161-20265180 | None:intergenic | 5.0% |
| AAAGGAGGAACTGGCAGCTA+GGG | - | chr4.2:20268372-20268391 | MS.gene90265:intron | 50.0% | |
| AACGGATGTGCTGCCTCTTA+TGG | - | chr4.2:20267241-20267260 | MS.gene90265:intron | 50.0% | |
| ACCTTGTGAGACACGCTCAA+GGG | - | chr4.2:20264712-20264731 | MS.gene90265:CDS | 50.0% | |
| AGTTCGCCAGCAACAATTGG+TGG | + | chr4.2:20267317-20267336 | None:intergenic | 50.0% | |
| ATTACTAGGTCGGAGGAACG+GGG | + | chr4.2:20269616-20269635 | None:intergenic | 50.0% | |
| CAACCTGTCATCCCAAGATG+AGG | + | chr4.2:20267447-20267466 | None:intergenic | 50.0% | |
| CAAGGGATCCACAATGTGGA+AGG | - | chr4.2:20264729-20264748 | MS.gene90265:CDS | 50.0% | |
| CAATTGTGAGCTTCGCTCCA+TGG | - | chr4.2:20269853-20269872 | MS.gene90265:CDS | 50.0% | |
| CATGGAGCGAAGCTCACAAT+TGG | + | chr4.2:20269855-20269874 | None:intergenic | 50.0% | |
| CCTCTTATGGTGGCAAATGC+AGG | - | chr4.2:20267254-20267273 | MS.gene90265:intron | 50.0% | |
| CCTGCATTTGCCACCATAAG+AGG | + | chr4.2:20267257-20267276 | None:intergenic | 50.0% | |
| CTCATCTCACTCCTCTTGGA+TGG | - | chr4.2:20264796-20264815 | MS.gene90265:intron | 50.0% | |
| GATCTCATCACCCTTCCTGT+TGG | + | chr4.2:20269064-20269083 | None:intergenic | 50.0% | |
| GATGCTCATCTCACTCCTCT+TGG | - | chr4.2:20264792-20264811 | MS.gene90265:intron | 50.0% | |
| GCCTAAGAGCCGACAAATTC+AGG | + | chr4.2:20265132-20265151 | None:intergenic | 50.0% | |
| GGACGAAAGGAAGTAAAGGG+GGG | + | chr4.2:20268992-20269011 | None:intergenic | 50.0% | |
| GTTCGCCAGCAACAATTGGT+GGG | + | chr4.2:20267316-20267335 | None:intergenic | 50.0% | |
| TCAACCTGTTCCCATCCAAG+AGG | + | chr4.2:20264810-20264829 | None:intergenic | 50.0% | |
| TGGAAATGATTGCCACCCCT+TGG | - | chr4.2:20269554-20269573 | MS.gene90265:intron | 50.0% | |
| TGTGGGATGTAGGGTTGACT+TGG | + | chr4.2:20265590-20265609 | None:intergenic | 50.0% | |
| TTGGGCCCCCTACTATTGAT+CGG | - | chr4.2:20265094-20265113 | MS.gene90265:intron | 50.0% | |
| ! | ACAGCTGTTGGGGTATTTGG+TGG | - | chr4.2:20267197-20267216 | MS.gene90265:intron | 50.0% |
| ! | AGCTGTTGGGGTATTTGGTG+GGG | - | chr4.2:20267199-20267218 | MS.gene90265:intron | 50.0% |
| ! | CAGCTGTTGGGGTATTTGGT+GGG | - | chr4.2:20267198-20267217 | MS.gene90265:intron | 50.0% |
| ! | GACTTGGTAGCTGGCAGTTA+AGG | + | chr4.2:20265574-20265593 | None:intergenic | 50.0% |
| !! | CCCTGAATTTGTCGGCTCTT+AGG | - | chr4.2:20265128-20265147 | MS.gene90265:intron | 50.0% |
| !! | GAATTTGTCGGCTCTTAGGC+CGG | - | chr4.2:20265132-20265151 | MS.gene90265:intron | 50.0% |
| !! | TGTAGGGTTGACTTGGTAGC+TGG | + | chr4.2:20265583-20265602 | None:intergenic | 50.0% |
| AAGGAGGAACTGGCAGCTAG+GGG | - | chr4.2:20268373-20268392 | MS.gene90265:intron | 55.0% | |
| AGGAAGTAAAGGGGGGCTTC+TGG | + | chr4.2:20268985-20269004 | None:intergenic | 55.0% | |
| AGGCAAGATACCTTCAGGGC+TGG | - | chr4.2:20270014-20270033 | MS.gene90265:CDS | 55.0% | |
| AGGGATGAACTCCCTGCATG+AGG | + | chr4.2:20268088-20268107 | None:intergenic | 55.0% | |
| CAAAGGAGGAACTGGCAGCT+AGG | - | chr4.2:20268371-20268390 | MS.gene90265:intron | 55.0% | |
| CACCTTGTGAGACACGCTCA+AGG | - | chr4.2:20264711-20264730 | MS.gene90265:CDS | 55.0% | |
| CACTCCTCTTGGATGGGAAC+AGG | - | chr4.2:20264803-20264822 | MS.gene90265:intron | 55.0% | |
| CGCTCAAGGGATCCACAATG+TGG | - | chr4.2:20264725-20264744 | MS.gene90265:CDS | 55.0% | |
| GGACAAGCCTAGTGATGCTG+TGG | - | chr4.2:20270035-20270054 | MS.gene90265:CDS | 55.0% | |
| GGATGTGCTGCCTCTTATGG+TGG | - | chr4.2:20267244-20267263 | MS.gene90265:intron | 55.0% | |
| GGGGGGTGGAGTTCTTAAAC+TGG | - | chr4.2:20268392-20268411 | MS.gene90265:intron | 55.0% | |
| GGTAGCTGGCAGTTAAGGAG+TGG | + | chr4.2:20265569-20265588 | None:intergenic | 55.0% | |
| TCCCTTGAGCGTGTCTCACA+AGG | + | chr4.2:20264716-20264735 | None:intergenic | 55.0% | |
| ! | GTTGGGGTATTTGGTGGGGA+GGG | - | chr4.2:20267203-20267222 | MS.gene90265:intron | 55.0% |
| ! | TGTTGGGGTATTTGGTGGGG+AGG | - | chr4.2:20267202-20267221 | MS.gene90265:intron | 55.0% |
| !! | AGCCCTGAAGGTATCTTGCC+TGG | + | chr4.2:20270015-20270034 | None:intergenic | 55.0% |
| AGGAGGAACTGGCAGCTAGG+GGG | - | chr4.2:20268374-20268393 | MS.gene90265:intron | 60.0% | |
| CTAGGCTTGTCCAGCCCTGA+AGG | + | chr4.2:20270027-20270046 | None:intergenic | 60.0% | |
| GCGTCACTGATGCGCTGTGT+TGG | - | chr4.2:20265948-20265967 | MS.gene90265:intron | 60.0% | |
| GCTTCGCTCCATGGTCCTTG+TGG | - | chr4.2:20269862-20269881 | MS.gene90265:CDS | 60.0% | |
| GGAGGAACTGGCAGCTAGGG+GGG | - | chr4.2:20268375-20268394 | MS.gene90265:intron | 65.0% | |
| GGAACTGGCAGCTAGGGGGG+TGG | - | chr4.2:20268378-20268397 | MS.gene90265:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 20264657 | 20270086 | 20264657 | ID=MS.gene90265 |
| chr4.2 | mRNA | 20264657 | 20270086 | 20264657 | ID=MS.gene90265.t1;Parent=MS.gene90265 |
| chr4.2 | exon | 20269839 | 20270086 | 20269839 | ID=MS.gene90265.t1.exon1;Parent=MS.gene90265.t1 |
| chr4.2 | CDS | 20269839 | 20270086 | 20269839 | ID=cds.MS.gene90265.t1;Parent=MS.gene90265.t1 |
| chr4.2 | exon | 20267391 | 20267556 | 20267391 | ID=MS.gene90265.t1.exon2;Parent=MS.gene90265.t1 |
| chr4.2 | CDS | 20267391 | 20267556 | 20267391 | ID=cds.MS.gene90265.t1;Parent=MS.gene90265.t1 |
| chr4.2 | exon | 20266574 | 20266648 | 20266574 | ID=MS.gene90265.t1.exon3;Parent=MS.gene90265.t1 |
| chr4.2 | CDS | 20266574 | 20266648 | 20266574 | ID=cds.MS.gene90265.t1;Parent=MS.gene90265.t1 |
| chr4.2 | exon | 20266330 | 20266418 | 20266330 | ID=MS.gene90265.t1.exon4;Parent=MS.gene90265.t1 |
| chr4.2 | CDS | 20266330 | 20266418 | 20266330 | ID=cds.MS.gene90265.t1;Parent=MS.gene90265.t1 |
| chr4.2 | exon | 20265145 | 20265264 | 20265145 | ID=MS.gene90265.t1.exon5;Parent=MS.gene90265.t1 |
| chr4.2 | CDS | 20265145 | 20265264 | 20265145 | ID=cds.MS.gene90265.t1;Parent=MS.gene90265.t1 |
| chr4.2 | exon | 20264852 | 20264896 | 20264852 | ID=MS.gene90265.t1.exon6;Parent=MS.gene90265.t1 |
| chr4.2 | CDS | 20264852 | 20264896 | 20264852 | ID=cds.MS.gene90265.t1;Parent=MS.gene90265.t1 |
| chr4.2 | exon | 20264657 | 20264765 | 20264657 | ID=MS.gene90265.t1.exon7;Parent=MS.gene90265.t1 |
| chr4.2 | CDS | 20264657 | 20264765 | 20264657 | ID=cds.MS.gene90265.t1;Parent=MS.gene90265.t1 |
| Gene Sequence |
| Protein sequence |
