Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053623.t1 | XP_003608343.1 | 98.6 | 283 | 4 | 0 | 1 | 283 | 1 | 283 | 1.90E-165 | 591.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053623.t1 | Q9FGF0 | 76.2 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 2.7e-125 | 449.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053623.t1 | G7JU06 | 98.6 | 283 | 4 | 0 | 1 | 283 | 1 | 283 | 1.3e-165 | 591.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053623 | MS.gene08361 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene053623 | MS.gene90265 | 0.931181 | 5.52E-94 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053623.t1 | MTR_4g092840 | 98.587 | 283 | 4 | 0 | 1 | 283 | 1 | 283 | 0.0 | 582 |
| MS.gene053623.t1 | MTR_4g092840 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 9.37e-175 | 482 |
| MS.gene053623.t1 | MTR_3g111310 | 69.258 | 283 | 85 | 2 | 1 | 282 | 1 | 282 | 1.90e-146 | 412 |
| MS.gene053623.t1 | MTR_3g111310 | 69.258 | 283 | 85 | 2 | 1 | 282 | 51 | 332 | 4.42e-146 | 413 |
| MS.gene053623.t1 | MTR_5g067240 | 66.545 | 275 | 90 | 2 | 1 | 275 | 39 | 311 | 1.75e-137 | 390 |
| MS.gene053623.t1 | MTR_5g067240 | 63.212 | 193 | 69 | 2 | 1 | 193 | 39 | 229 | 7.41e-90 | 266 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053623.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene053623.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene053623.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene053623.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene053623.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene053623.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene053623.t1 | AT5G64460 | 76.157 | 281 | 64 | 2 | 1 | 279 | 1 | 280 | 6.57e-160 | 446 |
| MS.gene053623.t1 | AT5G64460 | 76.033 | 242 | 55 | 2 | 40 | 279 | 1 | 241 | 4.06e-135 | 382 |
| MS.gene053623.t1 | AT5G64460 | 76.033 | 242 | 55 | 2 | 40 | 279 | 1 | 241 | 4.06e-135 | 382 |
| MS.gene053623.t1 | AT5G64460 | 76.033 | 242 | 55 | 2 | 40 | 279 | 1 | 241 | 4.06e-135 | 382 |
| MS.gene053623.t1 | AT1G58280 | 65.580 | 276 | 94 | 1 | 1 | 276 | 43 | 317 | 1.92e-133 | 380 |
| MS.gene053623.t1 | AT1G58280 | 65.580 | 276 | 94 | 1 | 1 | 276 | 28 | 302 | 3.30e-133 | 379 |
| MS.gene053623.t1 | AT2G17280 | 67.041 | 267 | 86 | 2 | 6 | 271 | 5 | 270 | 4.37e-133 | 378 |
| MS.gene053623.t1 | AT2G17280 | 67.041 | 267 | 86 | 2 | 6 | 271 | 5 | 270 | 4.37e-133 | 378 |
| MS.gene053623.t1 | AT1G58280 | 67.164 | 268 | 87 | 1 | 9 | 276 | 35 | 301 | 1.08e-132 | 378 |
| MS.gene053623.t1 | AT1G58280 | 60.133 | 301 | 94 | 2 | 1 | 276 | 43 | 342 | 3.45e-127 | 365 |
| MS.gene053623.t1 | AT5G64460 | 77.000 | 200 | 43 | 2 | 82 | 279 | 1 | 199 | 4.45e-112 | 322 |
| MS.gene053623.t1 | AT1G09935 | 49.180 | 244 | 103 | 1 | 9 | 252 | 6 | 228 | 5.13e-82 | 247 |
| MS.gene053623.t1 | AT1G09935 | 48.760 | 242 | 103 | 1 | 9 | 250 | 6 | 226 | 2.28e-81 | 245 |
| MS.gene053623.t1 | AT1G09932 | 41.975 | 243 | 126 | 1 | 16 | 258 | 17 | 244 | 1.77e-67 | 211 |
| MS.gene053623.t1 | AT1G09932 | 43.103 | 232 | 117 | 1 | 16 | 247 | 17 | 233 | 2.78e-67 | 209 |
| MS.gene053623.t1 | AT1G09932 | 41.176 | 238 | 125 | 1 | 21 | 258 | 15 | 237 | 4.96e-64 | 202 |
| MS.gene053623.t1 | AT1G09932 | 37.449 | 243 | 112 | 2 | 16 | 258 | 17 | 219 | 1.58e-50 | 166 |
Find 75 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACAGCTGTTGGGGTATT+TGG | 0.191261 | 4.4:-21656864 | MS.gene053623:CDS |
| AGCAATATGGATTGCGTTGC+CGG | 0.276019 | 4.4:-21659405 | None:intergenic |
| TTTCACACTCTAACTACATT+TGG | 0.307340 | 4.4:-21654551 | MS.gene053623:CDS |
| CGAACTTTGCCGTGAACATT+TGG | 0.328841 | 4.4:-21656727 | MS.gene053623:intron |
| AACGGATGTGCTGCCTCTTA+TGG | 0.353393 | 4.4:-21656817 | MS.gene053623:CDS |
| CGTAAACATGTTCGTTCCTC+TGG | 0.353503 | 4.4:-21659219 | MS.gene053623:CDS |
| GGATGAAAATGTCGAGAAAC+AGG | 0.364230 | 4.4:-21654026 | MS.gene053623:CDS |
| CCTGCATTTGCCACCATAAG+AGG | 0.370940 | 4.4:+21656804 | None:intergenic |
| GATGCTCATCTCACTCCTCT+TGG | 0.375412 | 4.4:-21659264 | MS.gene053623:CDS |
| CACTCCTCTTGGATGGGAAC+AGG | 0.403646 | 4.4:-21659253 | MS.gene053623:CDS |
| GGACTTTGCAAACAGCTGTT+GGG | 0.407826 | 4.4:-21656872 | MS.gene053623:CDS |
| AGCATCAACAACTAACTATC+CGG | 0.418415 | 4.4:-21654089 | MS.gene053623:CDS |
| AAAGGAGGAACTGGCAGCTA+GGG | 0.425635 | 4.4:-21655686 | MS.gene053623:CDS |
| TATCCGGGCAAGATACCTTC+AGG | 0.427271 | 4.4:-21654073 | MS.gene053623:CDS |
| AATTGCCCACCAATTGTTGC+TGG | 0.429050 | 4.4:-21656750 | MS.gene053623:CDS |
| CAAAGTTCGCCAGCAACAAT+TGG | 0.431400 | 4.4:+21656741 | None:intergenic |
| TGTTGGGGTATTTGGTGGGG+AGG | 0.433278 | 4.4:-21656856 | MS.gene053623:CDS |
| AGATGAGCATCAAAATAATC+AGG | 0.437848 | 4.4:+21659276 | None:intergenic |
| CAAAGGAGGAACTGGCAGCT+AGG | 0.439691 | 4.4:-21655687 | MS.gene053623:CDS |
| AGGACTTTGCAAACAGCTGT+TGG | 0.439773 | 4.4:-21656873 | MS.gene053623:CDS |
| GATATTTCTTTCTTCACCAA+GGG | 0.440479 | 4.4:+21654515 | None:intergenic |
| GGAGGAACTGGCAGCTAGGG+GGG | 0.440908 | 4.4:-21655683 | MS.gene053623:CDS |
| CCTCTTATGGTGGCAAATGC+AGG | 0.448697 | 4.4:-21656804 | MS.gene053623:CDS |
| AAGAGAGACAAAGGAGGAAC+TGG | 0.456446 | 4.4:-21655695 | MS.gene053623:CDS |
| CAGCTGTTGGGGTATTTGGT+GGG | 0.460056 | 4.4:-21656860 | MS.gene053623:CDS |
| CATGGAGCGAAGCTCACAAT+TGG | 0.460292 | 4.4:+21654233 | None:intergenic |
| CTCATCTCACTCCTCTTGGA+TGG | 0.475264 | 4.4:-21659260 | MS.gene053623:CDS |
| GTTGGGGTATTTGGTGGGGA+GGG | 0.478766 | 4.4:-21656855 | MS.gene053623:CDS |
| CAATTGTGAGCTTCGCTCCA+TGG | 0.485079 | 4.4:-21654232 | MS.gene053623:CDS |
| ACAGCTGTTGGGGTATTTGG+TGG | 0.489900 | 4.4:-21656861 | MS.gene053623:CDS |
| GGATATTTCTTTCTTCACCA+AGG | 0.490934 | 4.4:+21654514 | None:intergenic |
| GGATAATGTAAGAGAGACAA+AGG | 0.493248 | 4.4:-21655704 | MS.gene053623:CDS |
| TAGACAGTGATGAGGATGTT+TGG | 0.508871 | 4.4:-21655732 | MS.gene053623:CDS |
| CTAGGCTTGTCCAGCCCTGA+AGG | 0.512267 | 4.4:+21654058 | None:intergenic |
| GGGCAAGATACCTTCAGGGC+TGG | 0.518060 | 4.4:-21654068 | MS.gene053623:CDS |
| TCCAATTAATACCTCATCAA+AGG | 0.521069 | 4.4:+21659162 | None:intergenic |
| GGGATACACTGATGATAAAA+CGG | 0.532332 | 4.4:-21656835 | MS.gene053623:CDS |
| AGCCCTGAAGGTATCTTGCC+CGG | 0.535829 | 4.4:+21654070 | None:intergenic |
| ATTTGCGTACCAAATGTTCA+CGG | 0.540428 | 4.4:+21656718 | None:intergenic |
| AGTTCGCCAGCAACAATTGG+TGG | 0.541305 | 4.4:+21656744 | None:intergenic |
| TGGAAATGATTGCCACCCCT+TGG | 0.547988 | 4.4:-21654531 | MS.gene053623:CDS |
| ATCCGGGCAAGATACCTTCA+GGG | 0.554632 | 4.4:-21654072 | MS.gene053623:CDS |
| ATGAAAATGTCGAGAAACAG+GGG | 0.561938 | 4.4:-21654024 | MS.gene053623:CDS |
| TCCCTTGAGCGTGTCTCACA+AGG | 0.562690 | 4.4:+21659343 | None:intergenic |
| TCATCTCACTCCTCTTGGAT+GGG | 0.565857 | 4.4:-21659259 | MS.gene053623:CDS |
| AGCTGTTGGGGTATTTGGTG+GGG | 0.570094 | 4.4:-21656859 | MS.gene053623:CDS |
| GCTTCGCTCCATGGTCCTTG+TGG | 0.578334 | 4.4:-21654223 | MS.gene053623:CDS |
| CAAGGGATCCACAATGTGGA+AGG | 0.581062 | 4.4:-21659327 | MS.gene053623:CDS |
| CTTTCTATCCACAAGGACCA+TGG | 0.586011 | 4.4:+21654215 | None:intergenic |
| ACAGTGATGAGGATGTTTGG+TGG | 0.587514 | 4.4:-21655729 | MS.gene053623:CDS |
| GCATCAACAACTAACTATCC+GGG | 0.587893 | 4.4:-21654088 | MS.gene053623:CDS |
| GACTTTGCAAACAGCTGTTG+GGG | 0.588956 | 4.4:-21656871 | MS.gene053623:CDS |
| GGACAAGCCTAGTGATGCTG+TGG | 0.593967 | 4.4:-21654047 | MS.gene053623:CDS |
| TAACGGAAACAAACACGAGC+CGG | 0.596669 | 4.4:+21659386 | None:intergenic |
| TCATCGCTTCTCCTTTGATG+AGG | 0.598983 | 4.4:-21659173 | MS.gene053623:intron |
| CACCTTGTGAGACACGCTCA+AGG | 0.601658 | 4.4:-21659345 | MS.gene053623:CDS |
| AGGAGGAACTGGCAGCTAGG+GGG | 0.601826 | 4.4:-21655684 | MS.gene053623:CDS |
| GATGAAAATGTCGAGAAACA+GGG | 0.608952 | 4.4:-21654025 | MS.gene053623:CDS |
| TTTCTTTCTTCACCAAGGGG+TGG | 0.614051 | 4.4:+21654519 | None:intergenic |
| AAGGAGGAACTGGCAGCTAG+GGG | 0.614949 | 4.4:-21655685 | MS.gene053623:CDS |
| TGATGAGGATGTTTGGTGGA+AGG | 0.616744 | 4.4:-21655725 | MS.gene053623:CDS |
| GATCTTGTTAATTAATCCAG+AGG | 0.617260 | 4.4:+21659203 | None:intergenic |
| AATGCAGGAAATAGCTTCCG+TGG | 0.617766 | 4.4:-21656789 | MS.gene053623:CDS |
| ACCTTGTGAGACACGCTCAA+GGG | 0.620665 | 4.4:-21659344 | MS.gene053623:CDS |
| ATATTTCTTTCTTCACCAAG+GGG | 0.623337 | 4.4:+21654516 | None:intergenic |
| GTTCGCCAGCAACAATTGGT+GGG | 0.629718 | 4.4:+21656745 | None:intergenic |
| ATACTCACTTTCTATCCACA+AGG | 0.636262 | 4.4:+21654208 | None:intergenic |
| CGCTCAAGGGATCCACAATG+TGG | 0.645094 | 4.4:-21659331 | MS.gene053623:CDS |
| GGATGTGCTGCCTCTTATGG+TGG | 0.662408 | 4.4:-21656814 | MS.gene053623:CDS |
| GTTTCAGATAGACAGTGATG+AGG | 0.665843 | 4.4:-21655740 | MS.gene053623:intron |
| TAATGTAAGAGAGACAAAGG+AGG | 0.671000 | 4.4:-21655701 | MS.gene053623:CDS |
| TCAACCTGTTCCCATCCAAG+AGG | 0.684422 | 4.4:+21659249 | None:intergenic |
| ATAGCGATTGTGACACACAG+TGG | 0.725382 | 4.4:-21654581 | MS.gene053623:CDS |
| TGAAAATGTCGAGAAACAGG+GGG | 0.746521 | 4.4:-21654023 | MS.gene053623:CDS |
| TATGACTTGAAATTGCACCA+CGG | 0.752320 | 4.4:+21656772 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATTAATGATATATGT+TGG | + | chr4.4:21657892-21657911 | None:intergenic | 10.0% |
| !! | TGTATATAAATTAGTAATAA+AGG | - | chr4.4:21657260-21657279 | MS.gene053623:intron | 10.0% |
| !!! | TAATTGTTTCATATATATTT+TGG | - | chr4.4:21656517-21656536 | MS.gene053623:intron | 10.0% |
| !!! | TATTATTTTCCATATTTAAA+TGG | + | chr4.4:21656288-21656307 | None:intergenic | 10.0% |
| !! | AAATTAGTAATAAAGGAAAA+AGG | - | chr4.4:21657267-21657286 | MS.gene053623:intron | 15.0% |
| !! | AATAAAGTAATGTAAAATAG+GGG | + | chr4.4:21658150-21658169 | None:intergenic | 15.0% |
| !! | ACATTAAATGAAAAATATGA+TGG | + | chr4.4:21655884-21655903 | None:intergenic | 15.0% |
| !! | GAATAAAGTAATGTAAAATA+GGG | + | chr4.4:21658151-21658170 | None:intergenic | 15.0% |
| !! | TTGATTGAAAAAAAAAAGAA+AGG | - | chr4.4:21655273-21655292 | MS.gene053623:intron | 15.0% |
| !!! | ATTAGAGTTTATATTTTGAA+AGG | + | chr4.4:21659255-21659274 | None:intergenic | 15.0% |
| !!! | GTTTGAATTTTATGAAAATA+TGG | - | chr4.4:21655904-21655923 | MS.gene053623:intron | 15.0% |
| !!! | TATTTTTCATATTAAAATGG+TGG | + | chr4.4:21655480-21655499 | None:intergenic | 15.0% |
| !!! | TTAGAGTTTATATTTTGAAA+GGG | + | chr4.4:21659254-21659273 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTCATTTTCAAA+CGG | - | chr4.4:21657921-21657940 | MS.gene053623:intron | 15.0% |
| !! | AAAACTAGATTGAAAAAACA+AGG | + | chr4.4:21656325-21656344 | None:intergenic | 20.0% |
| !! | AGAGACTAATATAAACATAA+AGG | + | chr4.4:21657647-21657666 | None:intergenic | 20.0% |
| !! | AGGAAATAAAAAATACAACA+GGG | + | chr4.4:21656407-21656426 | None:intergenic | 20.0% |
| !! | ATAAAAAACACAACAAGTAT+AGG | + | chr4.4:21655603-21655622 | None:intergenic | 20.0% |
| !! | GAACCAAAAAAAAATGTTAA+AGG | - | chr4.4:21657826-21657845 | MS.gene053623:intron | 20.0% |
| !! | GATTATTAGAACTGATATAT+TGG | - | chr4.4:21658669-21658688 | MS.gene053623:intron | 20.0% |
| !! | GGAATAAAGTAATGTAAAAT+AGG | + | chr4.4:21658152-21658171 | None:intergenic | 20.0% |
| !! | TTGAATGAAAAAGAAAGAAA+AGG | - | chr4.4:21656078-21656097 | MS.gene053623:intron | 20.0% |
| !!! | AAGTAAATGATTGACTTATT+TGG | - | chr4.4:21659143-21659162 | MS.gene053623:intron | 20.0% |
| !!! | AGCCTATTTTTCATTTAATT+GGG | - | chr4.4:21654437-21654456 | MS.gene053623:intron | 20.0% |
| !!! | ATTTTCCATATTTAAATGGT+GGG | + | chr4.4:21656284-21656303 | None:intergenic | 20.0% |
| !!! | ATTTTGCTATCAAATTCTTT+TGG | + | chr4.4:21656992-21657011 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTCAATCAACA+TGG | + | chr4.4:21655271-21655290 | None:intergenic | 20.0% |
| !!! | TATTTTCCATATTTAAATGG+TGG | + | chr4.4:21656285-21656304 | None:intergenic | 20.0% |
| !!! | TGCTTTACATTCTTTAATTT+GGG | - | chr4.4:21659041-21659060 | MS.gene053623:intron | 20.0% |
| !!! | TTGATATTAACATTGACTTA+TGG | - | chr4.4:21657390-21657409 | MS.gene053623:intron | 20.0% |
| !!! | TTTAATTTGAAAGTTGACTT+TGG | - | chr4.4:21655760-21655779 | MS.gene053623:intron | 20.0% |
| !!! | TTTTGCTATCAAATTCTTTT+GGG | + | chr4.4:21656991-21657010 | None:intergenic | 20.0% |
| ! | AAAAAATCTTGAGTACCTTT+AGG | + | chr4.4:21656448-21656467 | None:intergenic | 25.0% |
| ! | AAAAATAACAACGAAAAAGC+TGG | - | chr4.4:21657976-21657995 | MS.gene053623:intron | 25.0% |
| ! | AAAATGTGGAGAAAATTGTA+AGG | + | chr4.4:21657423-21657442 | None:intergenic | 25.0% |
| ! | AAATTATCTTCCACCATTAT+TGG | + | chr4.4:21658520-21658539 | None:intergenic | 25.0% |
| ! | ACAAACTAACATACTAACAT+TGG | + | chr4.4:21654851-21654870 | None:intergenic | 25.0% |
| ! | ATATTCCAATCTACTAATGA+AGG | + | chr4.4:21654583-21654602 | None:intergenic | 25.0% |
| ! | ATCTACTATGAATAATCAGT+AGG | - | chr4.4:21657127-21657146 | MS.gene053623:intron | 25.0% |
| ! | ATTTCCTCAGGATTAAATTT+GGG | - | chr4.4:21656420-21656439 | MS.gene053623:intron | 25.0% |
| ! | CAATGTTAATATCAAGACTA+AGG | + | chr4.4:21657385-21657404 | None:intergenic | 25.0% |
| ! | CAATTTAGTAACAGAAATTG+TGG | + | chr4.4:21654751-21654770 | None:intergenic | 25.0% |
| ! | CATCTAAATTCCAATTAGTT+TGG | + | chr4.4:21655845-21655864 | None:intergenic | 25.0% |
| ! | CCAAAAAAAAATGTTAAAGG+TGG | - | chr4.4:21657829-21657848 | MS.gene053623:intron | 25.0% |
| ! | GAGGAAATAAAAAATACAAC+AGG | + | chr4.4:21656408-21656427 | None:intergenic | 25.0% |
| ! | GGAAAATGAAAGATGTTAAT+AGG | + | chr4.4:21655459-21655478 | None:intergenic | 25.0% |
| ! | GTGCTTTACATTCTTTAATT+TGG | - | chr4.4:21659040-21659059 | MS.gene053623:intron | 25.0% |
| ! | TAACGTGTATTATACAAGAT+TGG | + | chr4.4:21655167-21655186 | None:intergenic | 25.0% |
| ! | TAAGTACATGTTAACATTGT+GGG | + | chr4.4:21654967-21654986 | None:intergenic | 25.0% |
| ! | TATCTTGACAGTTAAAAGAT+TGG | + | chr4.4:21656844-21656863 | None:intergenic | 25.0% |
| ! | TATTCCAATCTACTAATGAA+GGG | + | chr4.4:21654582-21654601 | None:intergenic | 25.0% |
| ! | TATTTCCTCAGGATTAAATT+TGG | - | chr4.4:21656419-21656438 | MS.gene053623:intron | 25.0% |
| ! | TCAAAAGTTAGTCATTTCAA+TGG | - | chr4.4:21655935-21655954 | MS.gene053623:CDS | 25.0% |
| ! | TGAAGATTCATGTAGTTATA+TGG | - | chr4.4:21658725-21658744 | MS.gene053623:intron | 25.0% |
| ! | TTAAGTACATGTTAACATTG+TGG | + | chr4.4:21654968-21654987 | None:intergenic | 25.0% |
| ! | TTATCTTCTATGAGCAAATA+GGG | - | chr4.4:21657357-21657376 | MS.gene053623:intron | 25.0% |
| ! | TTTAGCATTTCAAATTAACC+AGG | - | chr4.4:21655250-21655269 | MS.gene053623:intron | 25.0% |
| ! | TTTATCTTCTATGAGCAAAT+AGG | - | chr4.4:21657356-21657375 | MS.gene053623:intron | 25.0% |
| !! | ACTTCTGTTAATTTTGTAGT+TGG | + | chr4.4:21657337-21657356 | None:intergenic | 25.0% |
| !! | AGTAAACAACATTGTTACTT+TGG | + | chr4.4:21655123-21655142 | None:intergenic | 25.0% |
| !! | GTGAAATATCAATTTTGTGT+TGG | + | chr4.4:21658274-21658293 | None:intergenic | 25.0% |
| !! | TAGGAAAAATATAGAAGTGT+AGG | + | chr4.4:21656245-21656264 | None:intergenic | 25.0% |
| !! | TGACAATAAATTTAAAGCTC+AGG | - | chr4.4:21657237-21657256 | MS.gene053623:intron | 25.0% |
| !! | TGATGCTTAATCATTACTTT+TGG | + | chr4.4:21656171-21656190 | None:intergenic | 25.0% |
| !!! | AAGCAATAGAATCTTTTTTC+TGG | + | chr4.4:21658751-21658770 | None:intergenic | 25.0% |
| !!! | ATCTAGTTTTAACAAGAGAA+AGG | - | chr4.4:21656335-21656354 | MS.gene053623:intron | 25.0% |
| !!! | CAGCCTATTTTTCATTTAAT+TGG | - | chr4.4:21654436-21654455 | MS.gene053623:intron | 25.0% |
| !!! | CCACCTTTAACATTTTTTTT+TGG | + | chr4.4:21657832-21657851 | None:intergenic | 25.0% |
| !!! | CGGTACTTTTAAGTTTTAAA+TGG | + | chr4.4:21657094-21657113 | None:intergenic | 25.0% |
| !!! | GAACATATTTTTACCTGTTT+CGG | - | chr4.4:21656731-21656750 | MS.gene053623:CDS | 25.0% |
| !!! | GTAAACAACATTGTTACTTT+GGG | + | chr4.4:21655122-21655141 | None:intergenic | 25.0% |
| !!! | GTTGTATTTTTTATTTCCTC+AGG | - | chr4.4:21656408-21656427 | MS.gene053623:intron | 25.0% |
| !!! | TTAACATTGACTTATGGATA+TGG | - | chr4.4:21657396-21657415 | MS.gene053623:intron | 25.0% |
| !!! | TTCATATATATTTTGGCTTC+AGG | - | chr4.4:21656524-21656543 | MS.gene053623:intron | 25.0% |
| !!! | TTTTTTTTTAACTCGGTATC+CGG | + | chr4.4:21654515-21654534 | None:intergenic | 25.0% |
| AAAAATCAACAGCAGGAAAA+AGG | + | chr4.4:21657504-21657523 | None:intergenic | 30.0% | |
| AAGCCATCGTTTAATTATTG+GGG | - | chr4.4:21658572-21658591 | MS.gene053623:intron | 30.0% | |
| AAGGTTATATGAAATGTGTG+TGG | - | chr4.4:21654541-21654560 | MS.gene053623:CDS | 30.0% | |
| AAGTGTATACTATCACTCTT+TGG | - | chr4.4:21658104-21658123 | MS.gene053623:intron | 30.0% | |
| ACTATGAATAATCAGTAGGA+TGG | - | chr4.4:21657131-21657150 | MS.gene053623:intron | 30.0% | |
| ACTGTTTAGCAATTTCATGT+AGG | - | chr4.4:21654776-21654795 | MS.gene053623:intron | 30.0% | |
| ACTTTGTTAATACTCAGGAA+TGG | - | chr4.4:21657804-21657823 | MS.gene053623:intron | 30.0% | |
| AGATGAGCATCAAAATAATC+AGG | + | chr4.4:21654144-21654163 | None:intergenic | 30.0% | |
| AGCGAGTAATACAAAAACAT+AGG | + | chr4.4:21655671-21655690 | None:intergenic | 30.0% | |
| ATATTTCTTTCTTCACCAAG+GGG | + | chr4.4:21658904-21658923 | None:intergenic | 30.0% | |
| ATTACTTTCGGCAACAAAAA+GGG | + | chr4.4:21655354-21655373 | None:intergenic | 30.0% | |
| CAAGCCATCGTTTAATTATT+GGG | - | chr4.4:21658571-21658590 | MS.gene053623:intron | 30.0% | |
| CATTTCCCACCATTTAAATA+TGG | - | chr4.4:21656276-21656295 | MS.gene053623:intron | 30.0% | |
| CTACATGAATCTTCAACTAA+TGG | + | chr4.4:21658720-21658739 | None:intergenic | 30.0% | |
| CTTCAACTAATGGAAATAAC+TGG | + | chr4.4:21658710-21658729 | None:intergenic | 30.0% | |
| GATATTTCTTTCTTCACCAA+GGG | + | chr4.4:21658905-21658924 | None:intergenic | 30.0% | |
| GATCTTGTTAATTAATCCAG+AGG | + | chr4.4:21654217-21654236 | None:intergenic | 30.0% | |
| GCGAAAAATTTCAATGCTTA+CGG | + | chr4.4:21654688-21654707 | None:intergenic | 30.0% | |
| GGAACATATTCCAAACTAAT+TGG | - | chr4.4:21655832-21655851 | MS.gene053623:intron | 30.0% | |
| GGCCCAATTAAATGAAAAAT+AGG | + | chr4.4:21654442-21654461 | None:intergenic | 30.0% | |
| GTAATTCACAGTTAATTGAC+CGG | - | chr4.4:21656959-21656978 | MS.gene053623:intron | 30.0% | |
| GTCAATTAACTGTGAATTAC+AGG | + | chr4.4:21656959-21656978 | None:intergenic | 30.0% | |
| TAAAGGCAACAGTTAAATGT+TGG | + | chr4.4:21657630-21657649 | None:intergenic | 30.0% | |
| TAATTCACAGTTAATTGACC+GGG | - | chr4.4:21656960-21656979 | MS.gene053623:intron | 30.0% | |
| TACTCTATTGTGACCAATAA+TGG | - | chr4.4:21658504-21658523 | MS.gene053623:intron | 30.0% | |
| TATTCCCTTCATTAGTAGAT+TGG | - | chr4.4:21654575-21654594 | MS.gene053623:CDS | 30.0% | |
| TCATTTCTTTCGCTGTATTA+AGG | - | chr4.4:21657600-21657619 | MS.gene053623:intron | 30.0% | |
| TCCAATTAATACCTCATCAA+AGG | + | chr4.4:21654258-21654277 | None:intergenic | 30.0% | |
| TGATGCTTGATCATTACTTT+CGG | + | chr4.4:21655366-21655385 | None:intergenic | 30.0% | |
| TGTACTTAACATCTCATATC+TGG | - | chr4.4:21654979-21654998 | MS.gene053623:intron | 30.0% | |
| TTACTGTTGTTCTTTCCATA+CGG | - | chr4.4:21655396-21655415 | MS.gene053623:intron | 30.0% | |
| TTAGTCATTTCAATGGTTGA+CGG | - | chr4.4:21655942-21655961 | MS.gene053623:CDS | 30.0% | |
| TTGCTATATCTAGTAAGCTT+GGG | + | chr4.4:21658454-21658473 | None:intergenic | 30.0% | |
| TTGGAAAGAGTCATACATAT+TGG | + | chr4.4:21658375-21658394 | None:intergenic | 30.0% | |
| TTTCACACTCTAACTACATT+TGG | - | chr4.4:21658866-21658885 | MS.gene053623:intron | 30.0% | |
| ! | ATAATTTTGTAACTGCGTTG+AGG | - | chr4.4:21656480-21656499 | MS.gene053623:intron | 30.0% |
| ! | GATTAAATTTGGGATCCTAA+AGG | - | chr4.4:21656430-21656449 | MS.gene053623:intron | 30.0% |
| ! | TAGGAAAAGAATAGAAGTGT+AGG | + | chr4.4:21655440-21655459 | None:intergenic | 30.0% |
| ! | TCCTTTGATGAGGTATTAAT+TGG | - | chr4.4:21654254-21654273 | MS.gene053623:intron | 30.0% |
| ! | TCTAGTCTTTAACAAGAGAA+AGG | - | chr4.4:21655531-21655550 | MS.gene053623:intron | 30.0% |
| ! | TCTGCAATCAACATTTTTGT+AGG | - | chr4.4:21655563-21655582 | MS.gene053623:intron | 30.0% |
| !! | AATTTTTCGCAGTCATTTTC+CGG | - | chr4.4:21654698-21654717 | MS.gene053623:intron | 30.0% |
| !! | ATTACTTTTGGCAGCAAAAA+GGG | + | chr4.4:21656159-21656178 | None:intergenic | 30.0% |
| !! | CAGTATCGAACAAATTTTAC+AGG | - | chr4.4:21657174-21657193 | MS.gene053623:intron | 30.0% |
| !! | GTTAGTTTGTTAGTAGTTGT+TGG | - | chr4.4:21654861-21654880 | MS.gene053623:intron | 30.0% |
| !! | TCTGTTTTTCAATTGAACTC+AGG | - | chr4.4:21658789-21658808 | MS.gene053623:intron | 30.0% |
| !! | TCTTTCTTTTTCATTCAACC+TGG | + | chr4.4:21656076-21656095 | None:intergenic | 30.0% |
| !!! | AAATTCTTTTGGGTTTATCC+CGG | + | chr4.4:21656981-21657000 | None:intergenic | 30.0% |
| !!! | TACATATTGGCTGTTGATTT+TGG | + | chr4.4:21658362-21658381 | None:intergenic | 30.0% |
| AGCATCAACAACTAACTATC+CGG | - | chr4.4:21659328-21659347 | MS.gene053623:CDS | 35.0% | |
| AGCCATCGTTTAATTATTGG+GGG | - | chr4.4:21658573-21658592 | MS.gene053623:intron | 35.0% | |
| AGTGGAGTGATAACTGATAA+GGG | + | chr4.4:21654911-21654930 | None:intergenic | 35.0% | |
| ATACGAATGCAATAACCGTA+TGG | + | chr4.4:21656219-21656238 | None:intergenic | 35.0% | |
| ATACTCACTTTCTATCCACA+AGG | + | chr4.4:21659212-21659231 | None:intergenic | 35.0% | |
| ATCACTCTTTGGTTGTTTGT+GGG | - | chr4.4:21658115-21658134 | MS.gene053623:intron | 35.0% | |
| ATGAAAATGTCGAGAAACAG+GGG | - | chr4.4:21659393-21659412 | MS.gene053623:CDS | 35.0% | |
| ATGTTAACATTGTGGGATGT+AGG | + | chr4.4:21654960-21654979 | None:intergenic | 35.0% | |
| ATTTGCGTACCAAATGTTCA+CGG | + | chr4.4:21656702-21656721 | None:intergenic | 35.0% | |
| CAAAGCAATGATGTCAAACA+AGG | + | chr4.4:21654661-21654680 | None:intergenic | 35.0% | |
| CATTACTTTCGGCAACAAAA+AGG | + | chr4.4:21655355-21655374 | None:intergenic | 35.0% | |
| CCAAGACTTTGTTAATACTC+AGG | - | chr4.4:21657799-21657818 | MS.gene053623:intron | 35.0% | |
| CCTGAGTATTAACAAAGTCT+TGG | + | chr4.4:21657802-21657821 | None:intergenic | 35.0% | |
| CGAAACACAAATTACTAGGT+CGG | + | chr4.4:21658958-21658977 | None:intergenic | 35.0% | |
| CTGAAAAGTAAGATTGCAAC+TGG | + | chr4.4:21656885-21656904 | None:intergenic | 35.0% | |
| GAAGCGAAACACAAATTACT+AGG | + | chr4.4:21658962-21658981 | None:intergenic | 35.0% | |
| GAGTATTAACAAAGTCTTGG+AGG | + | chr4.4:21657799-21657818 | None:intergenic | 35.0% | |
| GATGAAAATGTCGAGAAACA+GGG | - | chr4.4:21659392-21659411 | MS.gene053623:CDS | 35.0% | |
| GCAAGCCATCGTTTAATTAT+TGG | - | chr4.4:21658570-21658589 | MS.gene053623:intron | 35.0% | |
| GGATAATGTAAGAGAGACAA+AGG | - | chr4.4:21657713-21657732 | MS.gene053623:intron | 35.0% | |
| GGATATTTCTTTCTTCACCA+AGG | + | chr4.4:21658906-21658925 | None:intergenic | 35.0% | |
| GGATGAGATCTTATACAATC+AGG | + | chr4.4:21658253-21658272 | None:intergenic | 35.0% | |
| GGGAAATGAAAGATGGTAAT+AGG | + | chr4.4:21656264-21656283 | None:intergenic | 35.0% | |
| GGGATACACTGATGATAAAA+CGG | - | chr4.4:21656582-21656601 | MS.gene053623:intron | 35.0% | |
| GTTTATGTTACATTGTCGTG+TGG | - | chr4.4:21655629-21655648 | MS.gene053623:intron | 35.0% | |
| TAACCGTATGGATAGAAGAA+CGG | + | chr4.4:21656207-21656226 | None:intergenic | 35.0% | |
| TAATGTAAGAGAGACAAAGG+AGG | - | chr4.4:21657716-21657735 | MS.gene053623:intron | 35.0% | |
| TATCACTCTTTGGTTGTTTG+TGG | - | chr4.4:21658114-21658133 | MS.gene053623:intron | 35.0% | |
| TATGACTTGAAATTGCACCA+CGG | + | chr4.4:21656648-21656667 | None:intergenic | 35.0% | |
| TATGTATGACTCTTTCCAAC+AGG | - | chr4.4:21658376-21658395 | MS.gene053623:intron | 35.0% | |
| TCTATTGTGACCAATAATGG+TGG | - | chr4.4:21658507-21658526 | MS.gene053623:intron | 35.0% | |
| TCTCACATGCAGTATTAACA+GGG | + | chr4.4:21658177-21658196 | None:intergenic | 35.0% | |
| TGTTAACATTGTGGGATGTA+GGG | + | chr4.4:21654959-21654978 | None:intergenic | 35.0% | |
| TGTTTAACACTAACAGTTGC+AGG | + | chr4.4:21659075-21659094 | None:intergenic | 35.0% | |
| TTACCGTTCTTCTATCCATA+CGG | - | chr4.4:21656201-21656220 | MS.gene053623:intron | 35.0% | |
| TTCTCACATGCAGTATTAAC+AGG | + | chr4.4:21658178-21658197 | None:intergenic | 35.0% | |
| ! | AAATGGTGGGAAATGAAAGA+TGG | + | chr4.4:21656271-21656290 | None:intergenic | 35.0% |
| ! | AACACTTCTTCTTTTGTCAC+AGG | + | chr4.4:21657467-21657486 | None:intergenic | 35.0% |
| ! | ACACTTCTTCTTTTGTCACA+GGG | + | chr4.4:21657466-21657485 | None:intergenic | 35.0% |
| ! | ATCGTTTTGCAACGATGTAA+CGG | + | chr4.4:21654051-21654070 | None:intergenic | 35.0% |
| ! | CTTGCTATATCTAGTAAGCT+TGG | + | chr4.4:21658455-21658474 | None:intergenic | 35.0% |
| ! | TTTCAATTGAACTCAGGTTG+TGG | - | chr4.4:21658795-21658814 | MS.gene053623:intron | 35.0% |
| !! | AGTTTGTTAGTAGTTGTTGG+AGG | - | chr4.4:21654864-21654883 | MS.gene053623:intron | 35.0% |
| !! | ATCTTACTTTTCAGGAGGAT+TGG | - | chr4.4:21656891-21656910 | MS.gene053623:intron | 35.0% |
| !! | CAGTTGCAATCTTACTTTTC+AGG | - | chr4.4:21656883-21656902 | MS.gene053623:intron | 35.0% |
| !! | CATGTGAGAAGCACTAAAAT+TGG | - | chr4.4:21658188-21658207 | MS.gene053623:intron | 35.0% |
| !! | CATTACTTTTGGCAGCAAAA+AGG | + | chr4.4:21656160-21656179 | None:intergenic | 35.0% |
| !! | TAAAAGTACCGTGCATCATA+GGG | - | chr4.4:21657103-21657122 | MS.gene053623:intron | 35.0% |
| !! | TCTTACTTTTCAGGAGGATT+GGG | - | chr4.4:21656892-21656911 | MS.gene053623:intron | 35.0% |
| !! | TTAAAAGTACCGTGCATCAT+AGG | - | chr4.4:21657102-21657121 | MS.gene053623:intron | 35.0% |
| !! | TTGCAATCTTACTTTTCAGG+AGG | - | chr4.4:21656886-21656905 | MS.gene053623:intron | 35.0% |
| !!! | GTTGATTTTGGTTGGATTGT+GGG | + | chr4.4:21658350-21658369 | None:intergenic | 35.0% |
| !!! | TATTGGCTGTTGATTTTGGT+TGG | + | chr4.4:21658358-21658377 | None:intergenic | 35.0% |
| !!! | TGTTGATTTTGGTTGGATTG+TGG | + | chr4.4:21658351-21658370 | None:intergenic | 35.0% |
| AAATTACTAGGTCGGAGGAA+CGG | + | chr4.4:21658950-21658969 | None:intergenic | 40.0% | |
| AACAAAGTCTTGGAGGTTTC+TGG | + | chr4.4:21657792-21657811 | None:intergenic | 40.0% | |
| AACAAGTTCAATCCTCGTCT+TGG | - | chr4.4:21656791-21656810 | MS.gene053623:CDS | 40.0% | |
| AACACAAATTACTAGGTCGG+AGG | + | chr4.4:21658955-21658974 | None:intergenic | 40.0% | |
| AATGGTTTCCATACTCAGAC+AGG | + | chr4.4:21657076-21657095 | None:intergenic | 40.0% | |
| ACAAGTTCAATCCTCGTCTT+GGG | - | chr4.4:21656792-21656811 | MS.gene053623:CDS | 40.0% | |
| ACATGCAGTATTAACAGGGA+CGG | + | chr4.4:21658173-21658192 | None:intergenic | 40.0% | |
| ACATGGACGAAAGGAAGTAA+AGG | + | chr4.4:21658326-21658345 | None:intergenic | 40.0% | |
| ACGTCAAGACACATTTGTTC+CGG | + | chr4.4:21654720-21654739 | None:intergenic | 40.0% | |
| AGTCTCACCGATCAATAGTA+GGG | + | chr4.4:21654465-21654484 | None:intergenic | 40.0% | |
| ATACGAATGCAAGAACCGTA+TGG | + | chr4.4:21655414-21655433 | None:intergenic | 40.0% | |
| ATACTTTCCCTGTCTGAGTA+TGG | - | chr4.4:21657065-21657084 | MS.gene053623:intron | 40.0% | |
| ATCAGAAACCACAAGCATTC+AGG | + | chr4.4:21657554-21657573 | None:intergenic | 40.0% | |
| ATGACTCTTTCCAACAGGAA+GGG | - | chr4.4:21658381-21658400 | MS.gene053623:intron | 40.0% | |
| ATGGACGAAAGGAAGTAAAG+GGG | + | chr4.4:21658324-21658343 | None:intergenic | 40.0% | |
| ATGGTTTCCATACTCAGACA+GGG | + | chr4.4:21657075-21657094 | None:intergenic | 40.0% | |
| CATAACTACTCTTCCGAAAC+AGG | + | chr4.4:21656747-21656766 | None:intergenic | 40.0% | |
| CATGGACGAAAGGAAGTAAA+GGG | + | chr4.4:21658325-21658344 | None:intergenic | 40.0% | |
| GACCCCCAATAATTAAACGA+TGG | + | chr4.4:21658578-21658597 | None:intergenic | 40.0% | |
| GACGAGCAATACATAAACAC+AGG | + | chr4.4:21654349-21654368 | None:intergenic | 40.0% | |
| GACGAGTAATGCATATGCAT+AGG | + | chr4.4:21655726-21655745 | None:intergenic | 40.0% | |
| GAGCAATACATAAACACAGG+AGG | + | chr4.4:21654346-21654365 | None:intergenic | 40.0% | |
| GAGTGGAGTGATAACTGATA+AGG | + | chr4.4:21654912-21654931 | None:intergenic | 40.0% | |
| GCATCAACAACTAACTATCC+GGG | - | chr4.4:21659329-21659348 | MS.gene053623:CDS | 40.0% | |
| GGATCCCAAATTTAATCCTG+AGG | + | chr4.4:21656427-21656446 | None:intergenic | 40.0% | |
| GGATGAAAATGTCGAGAAAC+AGG | - | chr4.4:21659391-21659410 | MS.gene053623:CDS | 40.0% | |
| GTCACAATAGAGTACAGCAA+AGG | + | chr4.4:21658498-21658517 | None:intergenic | 40.0% | |
| GTTTCAGATAGACAGTGATG+AGG | - | chr4.4:21657677-21657696 | MS.gene053623:intron | 40.0% | |
| TACTAACACCGTGAGTCATT+CGG | - | chr4.4:21655139-21655158 | MS.gene053623:intron | 40.0% | |
| TAGACAGTGATGAGGATGTT+TGG | - | chr4.4:21657685-21657704 | MS.gene053623:intron | 40.0% | |
| TATGACTCTTTCCAACAGGA+AGG | - | chr4.4:21658380-21658399 | MS.gene053623:intron | 40.0% | |
| TATGCATTACTCGTCTTGTC+TGG | - | chr4.4:21655731-21655750 | MS.gene053623:CDS | 40.0% | |
| TATGTATTGCTCGTCCTTTG+TGG | - | chr4.4:21654354-21654373 | MS.gene053623:intron | 40.0% | |
| TCAGTAATCGACGTTGTTGT+AGG | - | chr4.4:21656367-21656386 | MS.gene053623:intron | 40.0% | |
| TGAAAATGTCGAGAAACAGG+GGG | - | chr4.4:21659394-21659413 | MS.gene053623:CDS | 40.0% | |
| TGATCACGCTAGTAGTCTTT+GGG | - | chr4.4:21655811-21655830 | MS.gene053623:intron | 40.0% | |
| TGCTTCTGATCCTATCATAC+TGG | + | chr4.4:21659312-21659331 | None:intergenic | 40.0% | |
| TGTCAACTAGATTGCTTGCT+TGG | - | chr4.4:21654632-21654651 | MS.gene053623:intron | 40.0% | |
| TTGATCACGCTAGTAGTCTT+TGG | - | chr4.4:21655810-21655829 | MS.gene053623:intron | 40.0% | |
| ! | GACTGATTCCCTGAATTAGT+CGG | - | chr4.4:21654481-21654500 | MS.gene053623:intron | 40.0% |
| ! | TCCACATTTTTCCTCATGCA+GGG | - | chr4.4:21657433-21657452 | MS.gene053623:intron | 40.0% |
| ! | TGCTTTTCGTCCAGTATGAT+AGG | - | chr4.4:21659299-21659318 | MS.gene053623:CDS | 40.0% |
| ! | TTCGCTTCTCTTGTTATGTG+AGG | - | chr4.4:21658974-21658993 | MS.gene053623:intron | 40.0% |
| ! | TTTTCATCCACAGCATCACT+AGG | + | chr4.4:21659380-21659399 | None:intergenic | 40.0% |
| ! | TTTTGTCTCCTTCCACATTG+TGG | + | chr4.4:21654101-21654120 | None:intergenic | 40.0% |
| !! | AAAAGTACCGTGCATCATAG+GGG | - | chr4.4:21657104-21657123 | MS.gene053623:intron | 40.0% |
| !! | CTTACTTTTCAGGAGGATTG+GGG | - | chr4.4:21656893-21656912 | MS.gene053623:intron | 40.0% |
| !! | TTACTTTTCAGGAGGATTGG+GGG | - | chr4.4:21656894-21656913 | MS.gene053623:intron | 40.0% |
| !!! | TCCTGCTGTTGATTTTTCAC+TGG | - | chr4.4:21657507-21657526 | MS.gene053623:intron | 40.0% |
| AAGAGAGACAAAGGAGGAAC+TGG | - | chr4.4:21657722-21657741 | MS.gene053623:intron | 45.0% | |
| AATGCAGGAAATAGCTTCCG+TGG | - | chr4.4:21656628-21656647 | MS.gene053623:intron | 45.0% | |
| AATTACTAGGTCGGAGGAAC+GGG | + | chr4.4:21658949-21658968 | None:intergenic | 45.0% | |
| AATTGCCCACCAATTGTTGC+TGG | - | chr4.4:21656667-21656686 | MS.gene053623:intron | 45.0% | |
| ACAGTGATGAGGATGTTTGG+TGG | - | chr4.4:21657688-21657707 | MS.gene053623:intron | 45.0% | |
| AGGACTTTGCAAACAGCTGT+TGG | - | chr4.4:21656544-21656563 | MS.gene053623:intron | 45.0% | |
| AGTAGATCCCCTATGATGCA+CGG | + | chr4.4:21657114-21657133 | None:intergenic | 45.0% | |
| ATAGCGATTGTGACACACAG+TGG | - | chr4.4:21658836-21658855 | MS.gene053623:intron | 45.0% | |
| ATTGTGGGAACATGGACGAA+AGG | + | chr4.4:21658335-21658354 | None:intergenic | 45.0% | |
| CAAAGTTCGCCAGCAACAAT+TGG | + | chr4.4:21656679-21656698 | None:intergenic | 45.0% | |
| CACAATTGGCAAAGCTGCAA+AGG | + | chr4.4:21659173-21659192 | None:intergenic | 45.0% | |
| CAGTCTCACCGATCAATAGT+AGG | + | chr4.4:21654466-21654485 | None:intergenic | 45.0% | |
| CCTAAGAGCCGACTAATTCA+GGG | + | chr4.4:21654492-21654511 | None:intergenic | 45.0% | |
| CGAACTTTGCCGTGAACATT+TGG | - | chr4.4:21656690-21656709 | MS.gene053623:intron | 45.0% | |
| CGTAAACATGTTCGTTCCTC+TGG | - | chr4.4:21654198-21654217 | MS.gene053623:intron | 45.0% | |
| CTTTCTATCCACAAGGACCA+TGG | + | chr4.4:21659205-21659224 | None:intergenic | 45.0% | |
| GACGACGAATCTGACTTAGA+GGG | - | chr4.4:21659096-21659115 | MS.gene053623:intron | 45.0% | |
| GACTTTGCAAACAGCTGTTG+GGG | - | chr4.4:21656546-21656565 | MS.gene053623:intron | 45.0% | |
| GCCAGTGAAAAATCAACAGC+AGG | + | chr4.4:21657511-21657530 | None:intergenic | 45.0% | |
| GGACTTTGCAAACAGCTGTT+GGG | - | chr4.4:21656545-21656564 | MS.gene053623:intron | 45.0% | |
| GGAGTGATAACTGATAAGGG+TGG | + | chr4.4:21654908-21654927 | None:intergenic | 45.0% | |
| GTCTCACCGATCAATAGTAG+GGG | + | chr4.4:21654464-21654483 | None:intergenic | 45.0% | |
| TAACGGAAACAAACACGAGC+CGG | + | chr4.4:21654034-21654053 | None:intergenic | 45.0% | |
| TAACTGATAAGGGTGGTCTC+AGG | + | chr4.4:21654901-21654920 | None:intergenic | 45.0% | |
| TAAGATTGCAACTGGTGTGC+AGG | + | chr4.4:21656877-21656896 | None:intergenic | 45.0% | |
| TATTGCTCGTCCTTTGTGGT+TGG | - | chr4.4:21654358-21654377 | MS.gene053623:intron | 45.0% | |
| TCAACTTGGACCAACCACAA+AGG | + | chr4.4:21654371-21654390 | None:intergenic | 45.0% | |
| TCATCGCTTCTCCTTTGATG+AGG | - | chr4.4:21654244-21654263 | MS.gene053623:intron | 45.0% | |
| TCATCTCACTCCTCTTGGAT+GGG | - | chr4.4:21654158-21654177 | MS.gene053623:intron | 45.0% | |
| TCCATGCAGCAAAGTCAACT+TGG | + | chr4.4:21654385-21654404 | None:intergenic | 45.0% | |
| TCCCTGCATGAGGAAAAATG+TGG | + | chr4.4:21657437-21657456 | None:intergenic | 45.0% | |
| TCTCACCGATCAATAGTAGG+GGG | + | chr4.4:21654463-21654482 | None:intergenic | 45.0% | |
| TGACGACGAATCTGACTTAG+AGG | - | chr4.4:21659095-21659114 | MS.gene053623:intron | 45.0% | |
| TGGACGAAAGGAAGTAAAGG+GGG | + | chr4.4:21658323-21658342 | None:intergenic | 45.0% | |
| TTCAAGTGCCTGAATGCTTG+TGG | - | chr4.4:21657543-21657562 | MS.gene053623:intron | 45.0% | |
| TTGGTTGGATTGTGGGAACA+TGG | + | chr4.4:21658343-21658362 | None:intergenic | 45.0% | |
| TTTCTTTCTTCACCAAGGGG+TGG | + | chr4.4:21658901-21658920 | None:intergenic | 45.0% | |
| ! | ACAGGGAAAGTATGAGGTAC+AGG | + | chr4.4:21657058-21657077 | None:intergenic | 45.0% |
| ! | ACTCAGACAGGGAAAGTATG+AGG | + | chr4.4:21657064-21657083 | None:intergenic | 45.0% |
| ! | CAAACAGCTGTTGGGGTATT+TGG | - | chr4.4:21656553-21656572 | MS.gene053623:intron | 45.0% |
| ! | CTCCACATTTTTCCTCATGC+AGG | - | chr4.4:21657432-21657451 | MS.gene053623:intron | 45.0% |
| ! | GATTGGTACCGAATGACTCA+CGG | + | chr4.4:21655150-21655169 | None:intergenic | 45.0% |
| ! | GGTATTGAGAGCTTACTGCT+TGG | + | chr4.4:21658927-21658946 | None:intergenic | 45.0% |
| ! | TCCAAGTTGACTTTGCTGCA+TGG | - | chr4.4:21654381-21654400 | MS.gene053623:intron | 45.0% |
| ! | TGATGAGGATGTTTGGTGGA+AGG | - | chr4.4:21657692-21657711 | MS.gene053623:intron | 45.0% |
| !! | AGTTAAAAAAAAAAAAAAAA+AGG | - | chr4.4:21654522-21654541 | MS.gene053623:CDS | 5.0% |
| !!! | TAATATTTTTCATATTAAAA+TGG | + | chr4.4:21655483-21655502 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTAACT+CGG | + | chr4.4:21654522-21654541 | None:intergenic | 5.0% |
| AAAGGAGGAACTGGCAGCTA+GGG | - | chr4.4:21657731-21657750 | MS.gene053623:intron | 50.0% | |
| AACGGATGTGCTGCCTCTTA+TGG | - | chr4.4:21656600-21656619 | MS.gene053623:intron | 50.0% | |
| AATCCTCGTCTTGGGATGAC+AGG | - | chr4.4:21656800-21656819 | MS.gene053623:CDS | 50.0% | |
| ACCTTGTGAGACACGCTCAA+GGG | - | chr4.4:21654073-21654092 | MS.gene053623:CDS | 50.0% | |
| AGTTCGCCAGCAACAATTGG+TGG | + | chr4.4:21656676-21656695 | None:intergenic | 50.0% | |
| ATCCGGGCAAGATACCTTCA+GGG | - | chr4.4:21659345-21659364 | MS.gene053623:CDS | 50.0% | |
| ATTACTAGGTCGGAGGAACG+GGG | + | chr4.4:21658948-21658967 | None:intergenic | 50.0% | |
| CAAGGGATCCACAATGTGGA+AGG | - | chr4.4:21654090-21654109 | MS.gene053623:CDS | 50.0% | |
| CAATTGTGAGCTTCGCTCCA+TGG | - | chr4.4:21659185-21659204 | MS.gene053623:CDS | 50.0% | |
| CATGGAGCGAAGCTCACAAT+TGG | + | chr4.4:21659187-21659206 | None:intergenic | 50.0% | |
| CCTCTTATGGTGGCAAATGC+AGG | - | chr4.4:21656613-21656632 | MS.gene053623:intron | 50.0% | |
| CCTGCATTTGCCACCATAAG+AGG | + | chr4.4:21656616-21656635 | None:intergenic | 50.0% | |
| CTCATCTCACTCCTCTTGGA+TGG | - | chr4.4:21654157-21654176 | MS.gene053623:intron | 50.0% | |
| GATCTCATCACCCTTCCTGT+TGG | + | chr4.4:21658394-21658413 | None:intergenic | 50.0% | |
| GATGCTCATCTCACTCCTCT+TGG | - | chr4.4:21654153-21654172 | MS.gene053623:intron | 50.0% | |
| GCCTAAGAGCCGACTAATTC+AGG | + | chr4.4:21654493-21654512 | None:intergenic | 50.0% | |
| GGACGAAAGGAAGTAAAGGG+GGG | + | chr4.4:21658322-21658341 | None:intergenic | 50.0% | |
| GTTCGCCAGCAACAATTGGT+GGG | + | chr4.4:21656675-21656694 | None:intergenic | 50.0% | |
| TATCCGGGCAAGATACCTTC+AGG | - | chr4.4:21659344-21659363 | MS.gene053623:CDS | 50.0% | |
| TCAACCTGTTCCCATCCAAG+AGG | + | chr4.4:21654171-21654190 | None:intergenic | 50.0% | |
| TGGAAATGATTGCCACCCCT+TGG | - | chr4.4:21658886-21658905 | MS.gene053623:intron | 50.0% | |
| TGTCGAGAAACAGGGGGTTT+AGG | - | chr4.4:21659400-21659419 | MS.gene053623:CDS | 50.0% | |
| TTGGGCCCCCTACTATTGAT+CGG | - | chr4.4:21654455-21654474 | MS.gene053623:intron | 50.0% | |
| ! | ACAGCTGTTGGGGTATTTGG+TGG | - | chr4.4:21656556-21656575 | MS.gene053623:intron | 50.0% |
| ! | AGCTGTTGGGGTATTTGGTG+GGG | - | chr4.4:21656558-21656577 | MS.gene053623:intron | 50.0% |
| ! | CAGCTGTTGGGGTATTTGGT+GGG | - | chr4.4:21656557-21656576 | MS.gene053623:intron | 50.0% |
| ! | CCCTGAATTAGTCGGCTCTT+AGG | - | chr4.4:21654489-21654508 | MS.gene053623:intron | 50.0% |
| ! | GAATTAGTCGGCTCTTAGGC+CGG | - | chr4.4:21654493-21654512 | MS.gene053623:intron | 50.0% |
| ! | GACTTGGTAGCTGGCAGTTA+AGG | + | chr4.4:21654934-21654953 | None:intergenic | 50.0% |
| AAGGAGGAACTGGCAGCTAG+GGG | - | chr4.4:21657732-21657751 | MS.gene053623:intron | 55.0% | |
| AGGGATGAACTCCCTGCATG+AGG | + | chr4.4:21657447-21657466 | None:intergenic | 55.0% | |
| CAAAGGAGGAACTGGCAGCT+AGG | - | chr4.4:21657730-21657749 | MS.gene053623:intron | 55.0% | |
| CAACCTGTCATCCCAAGACG+AGG | + | chr4.4:21656806-21656825 | None:intergenic | 55.0% | |
| CACCTTGTGAGACACGCTCA+AGG | - | chr4.4:21654072-21654091 | MS.gene053623:CDS | 55.0% | |
| CACTCCTCTTGGATGGGAAC+AGG | - | chr4.4:21654164-21654183 | MS.gene053623:intron | 55.0% | |
| CGCTCAAGGGATCCACAATG+TGG | - | chr4.4:21654086-21654105 | MS.gene053623:CDS | 55.0% | |
| GGACAAGCCTAGTGATGCTG+TGG | - | chr4.4:21659370-21659389 | MS.gene053623:CDS | 55.0% | |
| GGATGTGCTGCCTCTTATGG+TGG | - | chr4.4:21656603-21656622 | MS.gene053623:intron | 55.0% | |
| GGGGGGTGGAGTTCTTAAAC+TGG | - | chr4.4:21657751-21657770 | MS.gene053623:intron | 55.0% | |
| GGTAGCTGGCAGTTAAGGAG+TGG | + | chr4.4:21654929-21654948 | None:intergenic | 55.0% | |
| TCCCTTGAGCGTGTCTCACA+AGG | + | chr4.4:21654077-21654096 | None:intergenic | 55.0% | |
| TGTGGGATGTAGGGTCGACT+TGG | + | chr4.4:21654950-21654969 | None:intergenic | 55.0% | |
| ! | GTTGGGGTATTTGGTGGGGA+GGG | - | chr4.4:21656562-21656581 | MS.gene053623:intron | 55.0% |
| ! | TGTTGGGGTATTTGGTGGGG+AGG | - | chr4.4:21656561-21656580 | MS.gene053623:intron | 55.0% |
| !! | AGCCCTGAAGGTATCTTGCC+CGG | + | chr4.4:21659350-21659369 | None:intergenic | 55.0% |
| !! | TGTAGGGTCGACTTGGTAGC+TGG | + | chr4.4:21654943-21654962 | None:intergenic | 55.0% |
| AGGAGGAACTGGCAGCTAGG+GGG | - | chr4.4:21657733-21657752 | MS.gene053623:intron | 60.0% | |
| CTAGGCTTGTCCAGCCCTGA+AGG | + | chr4.4:21659362-21659381 | None:intergenic | 60.0% | |
| GCGTCACTGATGCGCTGTGT+TGG | - | chr4.4:21655306-21655325 | MS.gene053623:intron | 60.0% | |
| GCTTCGCTCCATGGTCCTTG+TGG | - | chr4.4:21659194-21659213 | MS.gene053623:CDS | 60.0% | |
| GGGCAAGATACCTTCAGGGC+TGG | - | chr4.4:21659349-21659368 | MS.gene053623:CDS | 60.0% | |
| GGAGGAACTGGCAGCTAGGG+GGG | - | chr4.4:21657734-21657753 | MS.gene053623:intron | 65.0% | |
| GGAACTGGCAGCTAGGGGGG+TGG | - | chr4.4:21657737-21657756 | MS.gene053623:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 21654018 | 21659421 | 21654018 | ID=MS.gene053623 |
| chr4.4 | mRNA | 21654018 | 21659421 | 21654018 | ID=MS.gene053623.t1;Parent=MS.gene053623 |
| chr4.4 | exon | 21659174 | 21659421 | 21659174 | ID=MS.gene053623.t1.exon1;Parent=MS.gene053623.t1 |
| chr4.4 | CDS | 21659174 | 21659421 | 21659174 | ID=cds.MS.gene053623.t1;Parent=MS.gene053623.t1 |
| chr4.4 | exon | 21656728 | 21656893 | 21656728 | ID=MS.gene053623.t1.exon2;Parent=MS.gene053623.t1 |
| chr4.4 | CDS | 21656728 | 21656893 | 21656728 | ID=cds.MS.gene053623.t1;Parent=MS.gene053623.t1 |
| chr4.4 | exon | 21655911 | 21655985 | 21655911 | ID=MS.gene053623.t1.exon3;Parent=MS.gene053623.t1 |
| chr4.4 | CDS | 21655911 | 21655985 | 21655911 | ID=cds.MS.gene053623.t1;Parent=MS.gene053623.t1 |
| chr4.4 | exon | 21655667 | 21655755 | 21655667 | ID=MS.gene053623.t1.exon4;Parent=MS.gene053623.t1 |
| chr4.4 | CDS | 21655667 | 21655755 | 21655667 | ID=cds.MS.gene053623.t1;Parent=MS.gene053623.t1 |
| chr4.4 | exon | 21654509 | 21654628 | 21654509 | ID=MS.gene053623.t1.exon5;Parent=MS.gene053623.t1 |
| chr4.4 | CDS | 21654509 | 21654628 | 21654509 | ID=cds.MS.gene053623.t1;Parent=MS.gene053623.t1 |
| chr4.4 | exon | 21654216 | 21654260 | 21654216 | ID=MS.gene053623.t1.exon6;Parent=MS.gene053623.t1 |
| chr4.4 | CDS | 21654216 | 21654260 | 21654216 | ID=cds.MS.gene053623.t1;Parent=MS.gene053623.t1 |
| chr4.4 | exon | 21654018 | 21654126 | 21654018 | ID=MS.gene053623.t1.exon7;Parent=MS.gene053623.t1 |
| chr4.4 | CDS | 21654018 | 21654126 | 21654018 | ID=cds.MS.gene053623.t1;Parent=MS.gene053623.t1 |
| Gene Sequence |
| Protein sequence |
