Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90405.t1 | XP_003595871.2 | 99.3 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.00E+00 | 1228.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90405.t1 | Q54V77 | 60.2 | 566 | 205 | 5 | 1 | 548 | 1 | 564 | 4.4e-197 | 689.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90405.t1 | A2Q3J8 | 99.3 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.0e+00 | 1228.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90405 | MS.gene056502 | PPI |
| MS.gene90405 | MS.gene040288 | PPI |
| MS.gene90405 | MS.gene95693 | PPI |
| MS.gene008780 | MS.gene90405 | PPI |
| MS.gene90405 | MS.gene060422 | PPI |
| MS.gene90405 | MS.gene93045 | PPI |
| MS.gene000889 | MS.gene90405 | PPI |
| MS.gene62577 | MS.gene90405 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90405.t1 | MTR_2g062770 | 99.339 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1238 |
| MS.gene90405.t1 | MTR_2g062770 | 99.281 | 556 | 4 | 0 | 50 | 605 | 1 | 556 | 0.0 | 1143 |
| MS.gene90405.t1 | MTR_8g446910 | 86.190 | 601 | 78 | 3 | 1 | 599 | 1 | 598 | 0.0 | 1065 |
| MS.gene90405.t1 | MTR_8g070540 | 77.281 | 581 | 127 | 2 | 1 | 581 | 1 | 576 | 0.0 | 934 |
| MS.gene90405.t1 | MTR_1g087440 | 72.894 | 546 | 148 | 0 | 1 | 546 | 1 | 546 | 0.0 | 843 |
| MS.gene90405.t1 | MTR_8g070540 | 81.159 | 483 | 91 | 0 | 1 | 483 | 1 | 483 | 0.0 | 822 |
| MS.gene90405.t1 | MTR_8g070540 | 74.405 | 504 | 124 | 2 | 78 | 581 | 1 | 499 | 0.0 | 786 |
| MS.gene90405.t1 | MTR_1g087440 | 72.747 | 466 | 127 | 0 | 1 | 466 | 1 | 466 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90405.t1 | AT3G12670 | 77.152 | 604 | 120 | 5 | 1 | 600 | 1 | 590 | 0.0 | 946 |
| MS.gene90405.t1 | AT1G30820 | 76.578 | 602 | 135 | 3 | 1 | 600 | 1 | 598 | 0.0 | 929 |
| MS.gene90405.t1 | AT4G20320 | 77.656 | 546 | 122 | 0 | 1 | 546 | 1 | 546 | 0.0 | 887 |
| MS.gene90405.t1 | AT4G20320 | 77.656 | 546 | 122 | 0 | 1 | 546 | 1 | 546 | 0.0 | 887 |
| MS.gene90405.t1 | AT4G20320 | 77.656 | 546 | 122 | 0 | 1 | 546 | 1 | 546 | 0.0 | 887 |
| MS.gene90405.t1 | AT4G20320 | 77.656 | 546 | 122 | 0 | 1 | 546 | 1 | 546 | 0.0 | 887 |
| MS.gene90405.t1 | AT4G20320 | 77.656 | 546 | 122 | 0 | 1 | 546 | 1 | 546 | 0.0 | 887 |
| MS.gene90405.t1 | AT2G34890 | 73.675 | 547 | 144 | 0 | 1 | 547 | 1 | 547 | 0.0 | 850 |
| MS.gene90405.t1 | AT4G02120 | 70.504 | 556 | 164 | 0 | 1 | 556 | 1 | 556 | 0.0 | 828 |
| MS.gene90405.t1 | AT4G20320 | 77.062 | 497 | 114 | 0 | 50 | 546 | 1 | 497 | 0.0 | 822 |
| MS.gene90405.t1 | AT4G02120 | 67.993 | 578 | 163 | 1 | 1 | 556 | 1 | 578 | 0.0 | 822 |
| MS.gene90405.t1 | AT4G02120 | 67.446 | 556 | 142 | 1 | 1 | 556 | 1 | 517 | 0.0 | 774 |
| MS.gene90405.t1 | AT4G02120 | 71.901 | 484 | 136 | 0 | 1 | 484 | 1 | 484 | 0.0 | 735 |
| MS.gene90405.t1 | AT4G02120 | 71.674 | 466 | 132 | 0 | 1 | 466 | 1 | 466 | 0.0 | 704 |
Find 160 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCAGGTTTAATGCTTTC+AGG | 0.149698 | 2.3:+31681573 | None:intergenic |
| TCCATGATGTTCCAAATATT+TGG | 0.186481 | 2.3:-31681848 | MS.gene90405:CDS |
| ATTGGTAAACACGCCGTTTA+AGG | 0.196018 | 2.3:+31678753 | None:intergenic |
| ACAGTCCATTCCTTCAAATT+AGG | 0.252019 | 2.3:+31681082 | None:intergenic |
| ATATGAAGCCGTTTCCATTT+TGG | 0.257398 | 2.3:+31678788 | None:intergenic |
| AAAGGAATGTGCCAAATATT+TGG | 0.257788 | 2.3:+31681837 | None:intergenic |
| TGGCCAAGTGCTTCAATAAA+AGG | 0.267239 | 2.3:+31682589 | None:intergenic |
| GGATCGACTCGTGCGCCTTC+TGG | 0.270287 | 2.3:+31681594 | None:intergenic |
| GTTCTAGTTCCAGGTGGTTT+TGG | 0.275870 | 2.3:-31680374 | MS.gene90405:CDS |
| TGGAAACTATGAACGTTTCT+TGG | 0.277183 | 2.3:-31683240 | MS.gene90405:CDS |
| CCATATCTCGGCATTTGCTT+GGG | 0.290767 | 2.3:-31680293 | MS.gene90405:CDS |
| TGCATATCTTTCTGTTCTTA+AGG | 0.299148 | 2.3:-31680883 | MS.gene90405:intron |
| GAGTTTGCGCGATCTGTTCT+CGG | 0.315091 | 2.3:-31680251 | MS.gene90405:CDS |
| TACCTGCGCGGTAAGAAAAT+TGG | 0.318865 | 2.3:+31682569 | None:intergenic |
| ACACACGGGGTCTTGGCTTC+AGG | 0.329027 | 2.3:+31680197 | None:intergenic |
| CGAGTTACTTCTATCAAGAT+TGG | 0.341672 | 2.3:-31684348 | MS.gene90405:intron |
| ATCCTGAAAGCACACCAAAA+TGG | 0.348939 | 2.3:-31678802 | MS.gene90405:CDS |
| GTTCGTCAACTCAGAGGATT+AGG | 0.349087 | 2.3:-31682168 | MS.gene90405:CDS |
| CGATGTTTGTGTCATCGAAT+TGG | 0.351079 | 2.3:-31682847 | MS.gene90405:CDS |
| TTAACTATTGGAATATATAA+TGG | 0.358987 | 2.3:-31678835 | MS.gene90405:CDS |
| GGTGGTGTTGTGAGTGGACT+TGG | 0.360358 | 2.3:-31684423 | MS.gene90405:CDS |
| ATTGTGGACTGGGTTCCAGC+TGG | 0.361622 | 2.3:-31680683 | MS.gene90405:CDS |
| CCCAAGCAAATGCCGAGATA+TGG | 0.366044 | 2.3:+31680293 | None:intergenic |
| CAGCGACAAGCAAGGAGATT+GGG | 0.368896 | 2.3:+31682138 | None:intergenic |
| CCTGGTCTGGACTTGAACTC+CGG | 0.374879 | 2.3:+31679295 | None:intergenic |
| TCCATATCTCGGCATTTGCT+TGG | 0.385332 | 2.3:-31680294 | MS.gene90405:CDS |
| TTGTCCCCGCATCAGTGTTC+AGG | 0.387901 | 2.3:+31683592 | None:intergenic |
| CGCGACAATAACATCACTAC+TGG | 0.390768 | 2.3:-31683203 | MS.gene90405:CDS |
| TCTCAACGTTGTTGGCGAAC+AGG | 0.396040 | 2.3:-31682392 | MS.gene90405:intron |
| GGGAGAAGGTTTCCCTGGTC+TGG | 0.396069 | 2.3:+31679282 | None:intergenic |
| TTGAAGGTTGACCTTGATCT+TGG | 0.404413 | 2.3:-31683260 | MS.gene90405:intron |
| TGCTACAAAGCCTAATTTGA+AGG | 0.406609 | 2.3:-31681092 | MS.gene90405:CDS |
| CAAGCAGCTCTATAAGCATT+TGG | 0.409132 | 2.3:+31680540 | None:intergenic |
| ATTTGAAGGAATGGACTGTT+AGG | 0.410591 | 2.3:-31681078 | MS.gene90405:CDS |
| GTTCCTATTCTCAACGTTGT+TGG | 0.410679 | 2.3:-31682400 | MS.gene90405:CDS |
| AGAGCGTGTAGCACAGATTC+CGG | 0.412475 | 2.3:-31682892 | MS.gene90405:CDS |
| GGCCCTTCTTTACCATCAAC+CGG | 0.413804 | 2.3:+31682873 | None:intergenic |
| TTGTGGACTGGGTTCCAGCT+GGG | 0.414193 | 2.3:-31680682 | MS.gene90405:CDS |
| GAGAGAAGAGGAGATTATCT+TGG | 0.415162 | 2.3:-31683058 | MS.gene90405:CDS |
| ATCGTAAACTTATTGTGGAC+TGG | 0.423544 | 2.3:-31680694 | MS.gene90405:CDS |
| TTATCTTGGAAAGACTGTTC+AGG | 0.424532 | 2.3:-31683044 | MS.gene90405:intron |
| GGCCACGCCAAGTTAACTAT+TGG | 0.431257 | 2.3:-31678847 | MS.gene90405:CDS |
| TTTGTTGGTAAAGATGAAAC+CGG | 0.431431 | 2.3:-31679499 | MS.gene90405:CDS |
| GGAGTTACTGCTAGCAGTAT+TGG | 0.434184 | 2.3:-31684396 | MS.gene90405:CDS |
| TGAACCAAACAAAAGTTTCC+AGG | 0.435213 | 2.3:+31682433 | None:intergenic |
| CTACACGCTCTATCCACTCT+TGG | 0.436359 | 2.3:+31682904 | None:intergenic |
| GCAAATGGAGTTCTAGTTCC+AGG | 0.438733 | 2.3:-31680383 | MS.gene90405:CDS |
| ATCGAATTGGGTGGAACTAT+AGG | 0.445616 | 2.3:-31682834 | MS.gene90405:intron |
| ATATATTCCAATAGTTAACT+TGG | 0.445955 | 2.3:+31678840 | None:intergenic |
| TCATCCAATGGATCCTTAAA+CGG | 0.446129 | 2.3:-31678766 | MS.gene90405:CDS |
| GTTCATAGTTTCCAAGATCA+AGG | 0.447669 | 2.3:+31683249 | None:intergenic |
| AAATATGACACACGGGGTCT+TGG | 0.448473 | 2.3:+31680190 | None:intergenic |
| CAGATTTGCAGTCAGCAACT+TGG | 0.450020 | 2.3:+31680019 | None:intergenic |
| TTACTCAGCACTGGCCTCTT+CGG | 0.453119 | 2.3:+31678871 | None:intergenic |
| GAACTATGCGTCTTGGTTCA+AGG | 0.455601 | 2.3:-31680053 | MS.gene90405:CDS |
| AAACCTTCTCCCCTCTTCTC+AGG | 0.457038 | 2.3:-31679271 | MS.gene90405:intron |
| GTAGCACAGATTCCGGTTGA+TGG | 0.466700 | 2.3:-31682885 | MS.gene90405:CDS |
| ACTCCGCTGCAGGGTGCAAA+TGG | 0.468252 | 2.3:-31680398 | MS.gene90405:intron |
| GATGTTTGTGTCATCGAATT+GGG | 0.468762 | 2.3:-31682846 | MS.gene90405:CDS |
| TTACCTCACCACCATCATCT+AGG | 0.472354 | 2.3:+31683538 | None:intergenic |
| CCCTACCTGAACACTGATGC+GGG | 0.474129 | 2.3:-31683597 | MS.gene90405:CDS |
| TACACTTCTCCATGTTCAAA+AGG | 0.479857 | 2.3:+31683564 | None:intergenic |
| ACAGCGACAAGCAAGGAGAT+TGG | 0.479918 | 2.3:+31682137 | None:intergenic |
| ATTCCGGTTGATGGTAAAGA+AGG | 0.482274 | 2.3:-31682876 | MS.gene90405:CDS |
| CAAAGCCTAATTTGAAGGAA+TGG | 0.484796 | 2.3:-31681087 | MS.gene90405:CDS |
| ATAGGGTTCAAAGACACATA+TGG | 0.487860 | 2.3:-31680079 | MS.gene90405:intron |
| TGTGGACTGGGTTCCAGCTG+GGG | 0.488338 | 2.3:-31680681 | MS.gene90405:CDS |
| CTGAAAGCATTAAACCTGCC+AGG | 0.489038 | 2.3:-31681572 | MS.gene90405:CDS |
| CCGGAGTTCAAGTCCAGACC+AGG | 0.491996 | 2.3:-31679295 | MS.gene90405:CDS |
| GAACATAATGTTCCATATCT+CGG | 0.494147 | 2.3:-31680305 | MS.gene90405:CDS |
| GCGTGGCCGTTACTCAGCAC+TGG | 0.497771 | 2.3:+31678862 | None:intergenic |
| TCGCCAACAACGTTGAGAAT+AGG | 0.499547 | 2.3:+31682397 | None:intergenic |
| TTTGTCAAACGAACCCTGGC+AGG | 0.503537 | 2.3:+31681558 | None:intergenic |
| CACGCCGTTTAAGGATCCAT+TGG | 0.505173 | 2.3:+31678762 | None:intergenic |
| TTACTTACTTTCAATAGCAA+AGG | 0.508005 | 2.3:+31681819 | None:intergenic |
| GCCAAATATTTGGAACATCA+TGG | 0.508790 | 2.3:+31681847 | None:intergenic |
| CACTACTGGGAAAATTTACC+AGG | 0.510382 | 2.3:-31683189 | MS.gene90405:intron |
| CCTTGCTTGTCGCTGTTCAA+AGG | 0.512523 | 2.3:-31682130 | MS.gene90405:intron |
| CATATCTCGGCATTTGCTTG+GGG | 0.512883 | 2.3:-31680292 | MS.gene90405:CDS |
| AGAGAAAATACCTGAGAAGA+GGG | 0.515823 | 2.3:+31679261 | None:intergenic |
| CTGGTCTGGACTTGAACTCC+GGG | 0.516367 | 2.3:+31679296 | None:intergenic |
| TCTAGCTGAGATACCATGTC+AGG | 0.524304 | 2.3:+31679538 | None:intergenic |
| AAGCAGCTTGCGAGCCGAAG+AGG | 0.532446 | 2.3:-31678885 | MS.gene90405:CDS |
| TCGTAAACTTATTGTGGACT+GGG | 0.534430 | 2.3:-31680693 | MS.gene90405:CDS |
| ACACACCTCCATGCGACTCC+CGG | 0.535106 | 2.3:+31679480 | None:intergenic |
| TGACGAACACTGTGCTGAGT+TGG | 0.538032 | 2.3:+31682183 | None:intergenic |
| AAGAGGGGAGAAGGTTTCCC+TGG | 0.544014 | 2.3:+31679277 | None:intergenic |
| CAGTAGTGATGTTATTGTCG+CGG | 0.544782 | 2.3:+31683204 | None:intergenic |
| CAACGTTGAGAATAGGAACT+AGG | 0.545010 | 2.3:+31682404 | None:intergenic |
| TCACAATCGTAAACTTATTG+TGG | 0.546252 | 2.3:-31680699 | MS.gene90405:CDS |
| GTGACTGGTGGTGTTGTGAG+TGG | 0.547908 | 2.3:-31684429 | MS.gene90405:CDS |
| GTTATTGAGAAGGAGAGAAG+AGG | 0.552192 | 2.3:-31683070 | MS.gene90405:CDS |
| TTCCAATAGTTAACTTGGCG+TGG | 0.552646 | 2.3:+31678845 | None:intergenic |
| CCCGCATCAGTGTTCAGGTA+GGG | 0.554250 | 2.3:+31683597 | None:intergenic |
| AGTAGTGATGTTATTGTCGC+GGG | 0.554767 | 2.3:+31683205 | None:intergenic |
| ATACCTGAGAAGAGGGGAGA+AGG | 0.554788 | 2.3:+31679268 | None:intergenic |
| AGATGAAACCGGGAGTCGCA+TGG | 0.556962 | 2.3:-31679488 | MS.gene90405:CDS |
| TAGGGTTCAAAGACACATAT+GGG | 0.557381 | 2.3:-31680078 | MS.gene90405:CDS |
| TTTGGTGACAGAGGAGTGCA+AGG | 0.558985 | 2.3:-31680356 | MS.gene90405:CDS |
| AAGATATGCATCTGAAAGAC+CGG | 0.559150 | 2.3:+31680896 | None:intergenic |
| GTATCTCAGCTAGAGAGTGC+TGG | 0.559960 | 2.3:-31679529 | MS.gene90405:CDS |
| AAAGCACACCAAAATGGAAA+CGG | 0.560399 | 2.3:-31678796 | MS.gene90405:CDS |
| CAATGGCAATGGAGTGTATG+TGG | 0.560868 | 2.3:-31678734 | MS.gene90405:CDS |
| CACATACACTCCATTGCCAT+TGG | 0.561416 | 2.3:+31678735 | None:intergenic |
| CTCACAGGTTAGAATTGCTA+TGG | 0.565727 | 2.3:-31680931 | MS.gene90405:intron |
| GCGACATCGGCATAGATATG+AGG | 0.569457 | 2.3:-31679655 | MS.gene90405:intron |
| CCTCTGTCACCAAAACCACC+TGG | 0.569816 | 2.3:+31680365 | None:intergenic |
| GATCTTGAAGACGTTACCTA+TGG | 0.570323 | 2.3:-31680659 | MS.gene90405:CDS |
| ATTAGTAATCACCTCGCCAT+AGG | 0.571739 | 2.3:+31680643 | None:intergenic |
| TATTGGCGTTCAGTTTCACC+CGG | 0.573152 | 2.3:-31679314 | MS.gene90405:CDS |
| GTTGTGAGTGGACTTGGGAA+AGG | 0.573729 | 2.3:-31684417 | MS.gene90405:CDS |
| TCGATGACACAAACATCGGC+AGG | 0.574503 | 2.3:+31682852 | None:intergenic |
| AGCGACAAGCAAGGAGATTG+GGG | 0.581004 | 2.3:+31682139 | None:intergenic |
| GGCGTGTTTACCAATGGCAA+TGG | 0.581749 | 2.3:-31678745 | MS.gene90405:CDS |
| ACGCTCTATCCACTCTTGGA+TGG | 0.582799 | 2.3:+31682908 | None:intergenic |
| GGACTTCTTCTTCAAGCATG+CGG | 0.583538 | 2.3:-31684375 | MS.gene90405:CDS |
| TAGAGAAAATACCTGAGAAG+AGG | 0.583540 | 2.3:+31679260 | None:intergenic |
| AAGAGGCCAGTGCTGAGTAA+CGG | 0.583988 | 2.3:-31678868 | MS.gene90405:CDS |
| ATGGGCGGAACTATGCGTCT+TGG | 0.585423 | 2.3:-31680060 | MS.gene90405:CDS |
| CAAATGCTTATAGAGCTGCT+TGG | 0.586050 | 2.3:-31680539 | MS.gene90405:CDS |
| CAGGTTAGAATTGCTATGGT+GGG | 0.595135 | 2.3:-31680927 | MS.gene90405:CDS |
| CTGTCCCAAATAGGACCAGA+AGG | 0.596540 | 2.3:-31681609 | MS.gene90405:intron |
| ACAGGTTAGAATTGCTATGG+TGG | 0.601819 | 2.3:-31680928 | MS.gene90405:intron |
| AACGGCTTCATATCATCCAA+TGG | 0.602689 | 2.3:-31678778 | MS.gene90405:CDS |
| CCCCGCATCAGTGTTCAGGT+AGG | 0.603919 | 2.3:+31683596 | None:intergenic |
| TGAAAGCATTAAACCTGCCA+GGG | 0.604950 | 2.3:-31681571 | MS.gene90405:intron |
| GGAACTTGACGACAATGCTA+AGG | 0.607713 | 2.3:-31682015 | MS.gene90405:CDS |
| TTAAACGGCGTGTTTACCAA+TGG | 0.612577 | 2.3:-31678751 | MS.gene90405:CDS |
| GCTCTGTTGATGAGCGACAT+CGG | 0.613046 | 2.3:-31679668 | MS.gene90405:CDS |
| TGGATGGCATCTGTTATGTG+TGG | 0.613308 | 2.3:+31682924 | None:intergenic |
| ACGTCTTCAAGATCCCCAGC+TGG | 0.613669 | 2.3:+31680668 | None:intergenic |
| GAACCAAACAAAAGTTTCCA+GGG | 0.614920 | 2.3:+31682434 | None:intergenic |
| CTGGCATAAATATGACACAC+GGG | 0.619952 | 2.3:+31680183 | None:intergenic |
| TTGTTGGTAAAGATGAAACC+GGG | 0.623519 | 2.3:-31679498 | MS.gene90405:CDS |
| TTCCGGTTGATGGTAAAGAA+GGG | 0.636005 | 2.3:-31682875 | MS.gene90405:CDS |
| TAACAGATGCCATCCAAGAG+TGG | 0.637396 | 2.3:-31682917 | MS.gene90405:CDS |
| GAAGTGTATGTCCTAGATGA+TGG | 0.641742 | 2.3:-31683549 | MS.gene90405:CDS |
| TCCCTACCTGAACACTGATG+CGG | 0.643901 | 2.3:-31683598 | MS.gene90405:CDS |
| CACAGTGTTCGTCAACTCAG+AGG | 0.651975 | 2.3:-31682174 | MS.gene90405:CDS |
| GTTTGTGTCATCGAATTGGG+TGG | 0.654153 | 2.3:-31682843 | MS.gene90405:CDS |
| GCGACAATAACATCACTACT+GGG | 0.655648 | 2.3:-31683202 | MS.gene90405:CDS |
| GGCAATGGAGTGTATGTGGA+TGG | 0.656047 | 2.3:-31678730 | MS.gene90405:CDS |
| GTGGTGTTGTGAGTGGACTT+GGG | 0.661249 | 2.3:-31684422 | MS.gene90405:CDS |
| GAGAAAATACCTGAGAAGAG+GGG | 0.662325 | 2.3:+31679262 | None:intergenic |
| GCTATGGTGGGAAAATACAC+CGG | 0.667248 | 2.3:-31680915 | MS.gene90405:CDS |
| TGAAGACGTTACCTATGGCG+AGG | 0.670220 | 2.3:-31680654 | MS.gene90405:intron |
| TGTACAGGTTAATCCTGACA+TGG | 0.672934 | 2.3:-31679551 | MS.gene90405:intron |
| CCTTTGAACAGCGACAAGCA+AGG | 0.687886 | 2.3:+31682130 | None:intergenic |
| CAATTCGATGACACAAACAT+CGG | 0.692358 | 2.3:+31682848 | None:intergenic |
| AATGGAGTTCTAGTTCCAGG+TGG | 0.696761 | 2.3:-31680380 | MS.gene90405:CDS |
| CGGAGTTCAAGTCCAGACCA+GGG | 0.696905 | 2.3:-31679294 | MS.gene90405:CDS |
| TTGGTGACAGAGGAGTGCAA+GGG | 0.696940 | 2.3:-31680355 | MS.gene90405:CDS |
| TGTCCTAGATGATGGTGGTG+AGG | 0.698931 | 2.3:-31683541 | MS.gene90405:intron |
| CCTACCTGAACACTGATGCG+GGG | 0.706161 | 2.3:-31683596 | MS.gene90405:CDS |
| GTGTATGTCCTAGATGATGG+TGG | 0.734802 | 2.3:-31683546 | MS.gene90405:CDS |
| TGGCATAAATATGACACACG+GGG | 0.736014 | 2.3:+31680184 | None:intergenic |
| TGAAACCGGGAGTCGCATGG+AGG | 0.739313 | 2.3:-31679485 | MS.gene90405:intron |
| TCTGGCATAAATATGACACA+CGG | 0.743087 | 2.3:+31680182 | None:intergenic |
| GGTTCAAAGACACATATGGG+CGG | 0.745720 | 2.3:-31680075 | MS.gene90405:CDS |
| TATGACAAACATTACCTGCG+CGG | 0.781899 | 2.3:+31682557 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAATAATAATAATTA+TGG | - | chr2.3:31683786-31683805 | MS.gene90405:intron | 0.0% |
| !!! | AAAAATATTAATTAATTTTT+TGG | - | chr2.3:31682557-31682576 | MS.gene90405:intron | 0.0% |
| !! | ATAAAAGAAAAACAATATTA+AGG | + | chr2.3:31679384-31679403 | None:intergenic | 10.0% |
| !! | TTCCAAAATAAAATATATTA+AGG | + | chr2.3:31683452-31683471 | None:intergenic | 10.0% |
| !!! | ATACTATTTTTAATTGTTTT+TGG | - | chr2.3:31680174-31680193 | MS.gene90405:intron | 10.0% |
| !!! | ATTTTACAAAAATATTTTGT+AGG | - | chr2.3:31680707-31680726 | MS.gene90405:CDS | 10.0% |
| !!! | TAATATTCTGTTATTTATAT+AGG | - | chr2.3:31682420-31682439 | MS.gene90405:CDS | 10.0% |
| !!! | TATTTTAAAGAAATTTGAAA+TGG | - | chr2.3:31680450-31680469 | MS.gene90405:intron | 10.0% |
| !! | AAAAACAATATTAAGGAAAT+AGG | + | chr2.3:31679377-31679396 | None:intergenic | 15.0% |
| !! | AAAAACCAAATAATAAATAC+AGG | + | chr2.3:31680022-31680041 | None:intergenic | 15.0% |
| !! | TTAACTATTGGAATATATAA+TGG | - | chr2.3:31684329-31684348 | MS.gene90405:intron | 15.0% |
| !!! | AAACTCTTTATTTTTTGTAT+TGG | - | chr2.3:31681627-31681646 | MS.gene90405:intron | 15.0% |
| !!! | AAGTTCAATTTGTTTATTTA+AGG | - | chr2.3:31681419-31681438 | MS.gene90405:intron | 15.0% |
| !!! | ATATATATTTTTCTATCCTA+AGG | - | chr2.3:31679655-31679674 | MS.gene90405:intron | 15.0% |
| !!! | GACCTTAATATATTTTATTT+TGG | - | chr2.3:31683447-31683466 | MS.gene90405:intron | 15.0% |
| !!! | TATGTTGATTTTTTAATCTT+TGG | + | chr2.3:31682162-31682181 | None:intergenic | 15.0% |
| !!! | TTCTTTGTTTGATATAAAAT+TGG | - | chr2.3:31679234-31679253 | MS.gene90405:intron | 15.0% |
| !!! | TTTATTTTGGAATTTTTGAT+AGG | - | chr2.3:31683460-31683479 | MS.gene90405:intron | 15.0% |
| !! | AAAAAGATACAAGTTTAACA+AGG | + | chr2.3:31683060-31683079 | None:intergenic | 20.0% |
| !! | AAACATTAATGTCATATTAC+CGG | + | chr2.3:31681201-31681220 | None:intergenic | 20.0% |
| !! | AAAGTGAATGCAAATTATTA+TGG | + | chr2.3:31682329-31682348 | None:intergenic | 20.0% |
| !! | AAATATATTAAGGTCATGTT+TGG | + | chr2.3:31683442-31683461 | None:intergenic | 20.0% |
| !! | AATAGATTTAGTGTATAACT+TGG | + | chr2.3:31684231-31684250 | None:intergenic | 20.0% |
| !! | ACATAAGTATATTCAGAAAA+TGG | + | chr2.3:31679745-31679764 | None:intergenic | 20.0% |
| !! | ATATATTCCAATAGTTAACT+TGG | + | chr2.3:31684327-31684346 | None:intergenic | 20.0% |
| !! | ATTGTTATACCCTAAAATAA+AGG | + | chr2.3:31684088-31684107 | None:intergenic | 20.0% |
| !! | CTAATTTACATAAGCTAATT+TGG | - | chr2.3:31680644-31680663 | MS.gene90405:intron | 20.0% |
| !! | CTTATGGAAAAAAAATCTTA+AGG | + | chr2.3:31683326-31683345 | None:intergenic | 20.0% |
| !! | TACTATTCAAAATCATTTCT+TGG | - | chr2.3:31683947-31683966 | MS.gene90405:intron | 20.0% |
| !! | TATATTCAGAAAATGGTTAA+TGG | + | chr2.3:31679738-31679757 | None:intergenic | 20.0% |
| !! | TCATAAATCAAATGAAAAAG+TGG | + | chr2.3:31681833-31681852 | None:intergenic | 20.0% |
| !! | TCGTATGATATTAATAATCA+CGG | + | chr2.3:31681667-31681686 | None:intergenic | 20.0% |
| !! | TTCTAAGTGAAATTATTAAC+CGG | - | chr2.3:31682736-31682755 | MS.gene90405:intron | 20.0% |
| !! | TTGTTATACCCTAAAATAAA+GGG | + | chr2.3:31684087-31684106 | None:intergenic | 20.0% |
| !! | TTTCTATTGTGTATCTATTT+CGG | - | chr2.3:31681714-31681733 | MS.gene90405:intron | 20.0% |
| !!! | ATTTGCATTTTTGATAAAAC+AGG | - | chr2.3:31684248-31684267 | MS.gene90405:intron | 20.0% |
| !!! | CAAATTACTAGTTTATTGTT+GGG | - | chr2.3:31679681-31679700 | MS.gene90405:CDS | 20.0% |
| !!! | CAATGTATAAGGATTTTTTA+TGG | + | chr2.3:31681960-31681979 | None:intergenic | 20.0% |
| !!! | GTAAATTAGTAAGAGTTTTT+CGG | + | chr2.3:31680633-31680652 | None:intergenic | 20.0% |
| !!! | TATTTAATTGATTGGCTAAA+TGG | - | chr2.3:31679145-31679164 | MS.gene90405:intron | 20.0% |
| !!! | TTCTGATTTTCTTTTTCTTT+TGG | - | chr2.3:31681524-31681543 | MS.gene90405:intron | 20.0% |
| !!! | TTGTATCTTTTTCATTGATA+GGG | - | chr2.3:31683068-31683087 | MS.gene90405:CDS | 20.0% |
| !!! | TTTTTTTGACTGCATAAAAT+TGG | - | chr2.3:31679259-31679278 | MS.gene90405:intron | 20.0% |
| ! | ACACATTCAGTTTAAATAGT+AGG | + | chr2.3:31682667-31682686 | None:intergenic | 25.0% |
| ! | ACATCAAATCTCAATGTATA+AGG | + | chr2.3:31681971-31681990 | None:intergenic | 25.0% |
| ! | AGATTATTAGTATCGTTGTA+TGG | + | chr2.3:31681253-31681272 | None:intergenic | 25.0% |
| ! | AGTTTCTTTCATTGAACTAA+TGG | - | chr2.3:31682032-31682051 | MS.gene90405:intron | 25.0% |
| ! | ATAGGAATATATAGAAAGAG+AGG | + | chr2.3:31679359-31679378 | None:intergenic | 25.0% |
| ! | ATTCTTTAATTGTCAACACA+TGG | + | chr2.3:31681103-31681122 | None:intergenic | 25.0% |
| ! | CAAATAATAAATACAGGTGA+AGG | + | chr2.3:31680016-31680035 | None:intergenic | 25.0% |
| ! | CGTATGATATTAATAATCAC+GGG | + | chr2.3:31681666-31681685 | None:intergenic | 25.0% |
| ! | CTGATATGTACATATATACA+TGG | - | chr2.3:31678903-31678922 | MS.gene90405:intron | 25.0% |
| ! | CTTCACCTGTATTTATTATT+TGG | - | chr2.3:31680014-31680033 | MS.gene90405:CDS | 25.0% |
| ! | GAACAGTAAAAAGAGAAATA+AGG | + | chr2.3:31681072-31681091 | None:intergenic | 25.0% |
| ! | GATTTATATGCACATATACA+TGG | + | chr2.3:31679063-31679082 | None:intergenic | 25.0% |
| ! | TACGAGATATTTCATTTGAT+TGG | - | chr2.3:31679188-31679207 | MS.gene90405:intron | 25.0% |
| ! | TAGACTAATTCAATCCAATT+AGG | + | chr2.3:31683244-31683263 | None:intergenic | 25.0% |
| ! | TTACTTACTTTCAATAGCAA+AGG | + | chr2.3:31681348-31681367 | None:intergenic | 25.0% |
| ! | TTGACAAGAAAAAAATGGTT+TGG | + | chr2.3:31681796-31681815 | None:intergenic | 25.0% |
| ! | TTTGAATAGTAAAAGATGAC+TGG | + | chr2.3:31683938-31683957 | None:intergenic | 25.0% |
| !! | AAATGATTTTTCTTTGATGC+AGG | - | chr2.3:31680536-31680555 | MS.gene90405:CDS | 25.0% |
| !! | AATGATTTTTCTTTGATGCA+GGG | - | chr2.3:31680537-31680556 | MS.gene90405:CDS | 25.0% |
| !! | AGATTGGTATTTTTCTACTT+TGG | - | chr2.3:31678832-31678851 | MS.gene90405:CDS | 25.0% |
| !! | CATCTCTTTTTAACAACATT+AGG | + | chr2.3:31682382-31682401 | None:intergenic | 25.0% |
| !! | CTTTCTTTTATATGTGTTGA+AGG | - | chr2.3:31679888-31679907 | MS.gene90405:intron | 25.0% |
| !! | GCAAATTACTAGTTTATTGT+TGG | - | chr2.3:31679680-31679699 | MS.gene90405:CDS | 25.0% |
| !! | TATTCTTTTTCTATTGCTAG+AGG | + | chr2.3:31678873-31678892 | None:intergenic | 25.0% |
| !! | TCTATTTGTTAAATAGTGAG+AGG | - | chr2.3:31680475-31680494 | MS.gene90405:intron | 25.0% |
| !! | TTATTATGGACCACTAATTT+TGG | + | chr2.3:31682315-31682334 | None:intergenic | 25.0% |
| !!! | ACATAAGCTAATTTGGTTTT+TGG | - | chr2.3:31680651-31680670 | MS.gene90405:intron | 25.0% |
| !!! | ATTGATGAACCCTTTATTTT+AGG | - | chr2.3:31684075-31684094 | MS.gene90405:intron | 25.0% |
| !!! | CTTGTATCTTTTTCATTGAT+AGG | - | chr2.3:31683067-31683086 | MS.gene90405:CDS | 25.0% |
| !!! | GAAGTTGCTATTTAATTGAT+TGG | - | chr2.3:31679137-31679156 | MS.gene90405:intron | 25.0% |
| !!! | TTGATGAACCCTTTATTTTA+GGG | - | chr2.3:31684076-31684095 | MS.gene90405:intron | 25.0% |
| !!! | TTTGGAATTTTTGATAGGTA+TGG | - | chr2.3:31683465-31683484 | MS.gene90405:intron | 25.0% |
| !!! | TTTGTCTTTGCTTTATTTGT+AGG | - | chr2.3:31680212-31680231 | MS.gene90405:CDS | 25.0% |
| !!! | TTTTTTTCCATAAGCTTTCT+AGG | - | chr2.3:31683332-31683351 | MS.gene90405:intron | 25.0% |
| AAAGGAATGTGCCAAATATT+TGG | + | chr2.3:31681330-31681349 | None:intergenic | 30.0% | |
| AACCAGAATGACAAATTTGA+TGG | + | chr2.3:31684028-31684047 | None:intergenic | 30.0% | |
| AACTGAACGCCAATAAAAAA+TGG | + | chr2.3:31683845-31683864 | None:intergenic | 30.0% | |
| AATCAAGAATGAATGTGGAA+GGG | + | chr2.3:31684151-31684170 | None:intergenic | 30.0% | |
| ATTTGAAAAGAGTGAACAAG+TGG | + | chr2.3:31679777-31679796 | None:intergenic | 30.0% | |
| CAAAGACAAAATGAAAACCA+AGG | + | chr2.3:31680202-31680221 | None:intergenic | 30.0% | |
| CAGAAAAATTGAATCGATGA+TGG | + | chr2.3:31680430-31680449 | None:intergenic | 30.0% | |
| CGAAGTTGACAAGAAAAAAA+TGG | + | chr2.3:31681801-31681820 | None:intergenic | 30.0% | |
| GAACATAATGTTCCATATCT+CGG | - | chr2.3:31682859-31682878 | MS.gene90405:CDS | 30.0% | |
| GATGATATGTTTCAGACTTA+CGG | + | chr2.3:31682140-31682159 | None:intergenic | 30.0% | |
| GGTAATTTCTCCAAAATTAG+TGG | - | chr2.3:31682302-31682321 | MS.gene90405:intron | 30.0% | |
| GTGATAATCAAGAATGAATG+TGG | + | chr2.3:31684156-31684175 | None:intergenic | 30.0% | |
| TAATCAAGAATGAATGTGGA+AGG | + | chr2.3:31684152-31684171 | None:intergenic | 30.0% | |
| TAGAAATTCGTATCGAGATA+CGG | + | chr2.3:31681700-31681719 | None:intergenic | 30.0% | |
| TATCGTTTGTTTGTTCACTT+AGG | - | chr2.3:31679829-31679848 | MS.gene90405:intron | 30.0% | |
| TCACAATCGTAAACTTATTG+TGG | - | chr2.3:31682465-31682484 | MS.gene90405:intron | 30.0% | |
| TCCATGATGTTCCAAATATT+TGG | - | chr2.3:31681316-31681335 | MS.gene90405:intron | 30.0% | |
| TGAAATTATTAACCGGTGTA+TGG | - | chr2.3:31682743-31682762 | MS.gene90405:intron | 30.0% | |
| TGCATATCTTTCTGTTCTTA+AGG | - | chr2.3:31682281-31682300 | MS.gene90405:intron | 30.0% | |
| TTCTTGATTATCACTGCAAA+TGG | - | chr2.3:31684162-31684181 | MS.gene90405:intron | 30.0% | |
| TTTACGAGTAAAGATGCAAT+GGG | - | chr2.3:31683560-31683579 | MS.gene90405:CDS | 30.0% | |
| ! | AACTAGTAATTTGCATCCTT+AGG | + | chr2.3:31679674-31679693 | None:intergenic | 30.0% |
| ! | AACTTTTATGCTGTATGTAC+AGG | - | chr2.3:31683598-31683617 | MS.gene90405:CDS | 30.0% |
| ! | ATGATTTTTCTTTGATGCAG+GGG | - | chr2.3:31680538-31680557 | MS.gene90405:CDS | 30.0% |
| ! | CAGCAACATAAAAGATTTTG+AGG | + | chr2.3:31679008-31679027 | None:intergenic | 30.0% |
| ! | CTAGTTTATTGTTGGGATTT+TGG | - | chr2.3:31679688-31679707 | MS.gene90405:intron | 30.0% |
| ! | CTCTTTGATGTTTTCTTTTC+TGG | - | chr2.3:31679319-31679338 | MS.gene90405:CDS | 30.0% |
| ! | CTTTTAGTCTGTTATTGAGA+AGG | - | chr2.3:31680084-31680103 | MS.gene90405:intron | 30.0% |
| ! | GATTATTTTCTGTCCCAAAT+AGG | - | chr2.3:31681546-31681565 | MS.gene90405:intron | 30.0% |
| ! | TAATTGATTGGCTAAATGGA+TGG | - | chr2.3:31679149-31679168 | MS.gene90405:intron | 30.0% |
| ! | TACAAGTGGTATTTTACAAG+TGG | - | chr2.3:31680913-31680932 | MS.gene90405:CDS | 30.0% |
| ! | TATTTTGCTTTCTTGTACGA+TGG | + | chr2.3:31679455-31679474 | None:intergenic | 30.0% |
| ! | TTTGTTGGTAAAGATGAAAC+CGG | - | chr2.3:31683665-31683684 | MS.gene90405:intron | 30.0% |
| !! | AAGCTTTATTACACACGTAT+AGG | - | chr2.3:31683192-31683211 | MS.gene90405:CDS | 30.0% |
| !! | TACTTTGTGAACCTTTGTTT+TGG | - | chr2.3:31678940-31678959 | MS.gene90405:intron | 30.0% |
| !! | TTTCACTTGTCTTTTTCACT+AGG | - | chr2.3:31681128-31681147 | MS.gene90405:intron | 30.0% |
| !!! | AAGGATTTTTTATGGCAACA+GGG | + | chr2.3:31681952-31681971 | None:intergenic | 30.0% |
| !!! | ACTTTGTGAACCTTTGTTTT+GGG | - | chr2.3:31678941-31678960 | MS.gene90405:intron | 30.0% |
| !!! | TAAGGATTTTTTATGGCAAC+AGG | + | chr2.3:31681953-31681972 | None:intergenic | 30.0% |
| !!! | TGTTTTCTTTTCTGGTTTTG+AGG | - | chr2.3:31679327-31679346 | MS.gene90405:CDS | 30.0% |
| !!! | TTTAATTGTTTTTGGTGCCT+TGG | - | chr2.3:31680182-31680201 | MS.gene90405:CDS | 30.0% |
| AAAGCACACCAAAATGGAAA+CGG | - | chr2.3:31684368-31684387 | MS.gene90405:CDS | 35.0% | |
| AAGATATGCATCTGAAAGAC+CGG | + | chr2.3:31682271-31682290 | None:intergenic | 35.0% | |
| AAGCAATTGTGAGATTGTCT+GGG | - | chr2.3:31683271-31683290 | MS.gene90405:intron | 35.0% | |
| AAGCTATCCTAGAAAGCTTA+TGG | + | chr2.3:31683342-31683361 | None:intergenic | 35.0% | |
| AAGTTTAACAAGGTTCTCAG+AGG | + | chr2.3:31683050-31683069 | None:intergenic | 35.0% | |
| AATATCTCGTAACCAAGTGA+TGG | + | chr2.3:31679179-31679198 | None:intergenic | 35.0% | |
| AATTAGGCCCTTCATTAACA+AGG | + | chr2.3:31683228-31683247 | None:intergenic | 35.0% | |
| ACAGTCCATTCCTTCAAATT+AGG | + | chr2.3:31682085-31682104 | None:intergenic | 35.0% | |
| AGAAATACCGAGCACAAAAT+AGG | + | chr2.3:31679429-31679448 | None:intergenic | 35.0% | |
| AGAGAAAATACCTGAGAAGA+GGG | + | chr2.3:31683906-31683925 | None:intergenic | 35.0% | |
| AGAGGAACAATATCATCAAC+TGG | + | chr2.3:31683032-31683051 | None:intergenic | 35.0% | |
| AGTAATGCCATAGATAGACT+TGG | - | chr2.3:31680867-31680886 | MS.gene90405:intron | 35.0% | |
| ATAGGGTTCAAAGACACATA+TGG | - | chr2.3:31683085-31683104 | MS.gene90405:intron | 35.0% | |
| ATCGTAAACTTATTGTGGAC+TGG | - | chr2.3:31682470-31682489 | MS.gene90405:intron | 35.0% | |
| ATTGGAACTCTCGAACAATA+AGG | - | chr2.3:31679206-31679225 | MS.gene90405:intron | 35.0% | |
| CAAAGCCTAATTTGAAGGAA+TGG | - | chr2.3:31682077-31682096 | MS.gene90405:intron | 35.0% | |
| CAATTCGATGACACAAACAT+CGG | + | chr2.3:31680319-31680338 | None:intergenic | 35.0% | |
| CCAATAAAAAATGGATGGCT+AGG | + | chr2.3:31683836-31683855 | None:intergenic | 35.0% | |
| CGAGTTACTTCTATCAAGAT+TGG | - | chr2.3:31678816-31678835 | MS.gene90405:CDS | 35.0% | |
| CTGATGATTTATGTAACTGC+AGG | - | chr2.3:31682599-31682618 | MS.gene90405:CDS | 35.0% | |
| CTTTACGAGTAAAGATGCAA+TGG | - | chr2.3:31683559-31683578 | MS.gene90405:CDS | 35.0% | |
| GAACCAAACAAAAGTTTCCA+GGG | + | chr2.3:31680733-31680752 | None:intergenic | 35.0% | |
| GAACGCCAATAAAAAATGGA+TGG | + | chr2.3:31683841-31683860 | None:intergenic | 35.0% | |
| GATGTTTGTGTCATCGAATT+GGG | - | chr2.3:31680318-31680337 | MS.gene90405:CDS | 35.0% | |
| GCATGACGTAAATATCAACT+AGG | + | chr2.3:31679716-31679735 | None:intergenic | 35.0% | |
| GTCCATCAAATTTGTCATTC+TGG | - | chr2.3:31684023-31684042 | MS.gene90405:intron | 35.0% | |
| GTTCATAGTTTCCAAGATCA+AGG | + | chr2.3:31679918-31679937 | None:intergenic | 35.0% | |
| TAAAAGTCCAACAACACGTT+AGG | + | chr2.3:31680055-31680074 | None:intergenic | 35.0% | |
| TAAGCAATTGTGAGATTGTC+TGG | - | chr2.3:31683270-31683289 | MS.gene90405:intron | 35.0% | |
| TAATTGTCAACACATGGAAC+CGG | + | chr2.3:31681097-31681116 | None:intergenic | 35.0% | |
| TACACTTCTCCATGTTCAAA+AGG | + | chr2.3:31679603-31679622 | None:intergenic | 35.0% | |
| TAGAGAAAATACCTGAGAAG+AGG | + | chr2.3:31683907-31683926 | None:intergenic | 35.0% | |
| TAGGGTTCAAAGACACATAT+GGG | - | chr2.3:31683086-31683105 | MS.gene90405:intron | 35.0% | |
| TCACGAGTTTAATCTCGATT+TGG | - | chr2.3:31681910-31681929 | MS.gene90405:intron | 35.0% | |
| TCATCCAATGGATCCTTAAA+CGG | - | chr2.3:31684398-31684417 | MS.gene90405:CDS | 35.0% | |
| TCGTAAACTTATTGTGGACT+GGG | - | chr2.3:31682471-31682490 | MS.gene90405:intron | 35.0% | |
| TCTGGCATAAATATGACACA+CGG | + | chr2.3:31682985-31683004 | None:intergenic | 35.0% | |
| TGAACCAAACAAAAGTTTCC+AGG | + | chr2.3:31680734-31680753 | None:intergenic | 35.0% | |
| TGCTACAAAGCCTAATTTGA+AGG | - | chr2.3:31682072-31682091 | MS.gene90405:intron | 35.0% | |
| TGGAAACTATGAACGTTTCT+TGG | - | chr2.3:31679924-31679943 | MS.gene90405:intron | 35.0% | |
| TTACGAGTAAAGATGCAATG+GGG | - | chr2.3:31683561-31683580 | MS.gene90405:CDS | 35.0% | |
| TTATCTTGGAAAGACTGTTC+AGG | - | chr2.3:31680120-31680139 | MS.gene90405:intron | 35.0% | |
| TTGAAACTCCTTTGTATGAC+TGG | - | chr2.3:31681380-31681399 | MS.gene90405:intron | 35.0% | |
| TTGGAACTCTCGAACAATAA+GGG | - | chr2.3:31679207-31679226 | MS.gene90405:intron | 35.0% | |
| TTGGTTACACAAAGTTTAGG+TGG | + | chr2.3:31681777-31681796 | None:intergenic | 35.0% | |
| TTGTTAATGAAGGGCCTAAT+TGG | - | chr2.3:31683227-31683246 | MS.gene90405:CDS | 35.0% | |
| ! | ACAATGTCTCCTTTTGAACA+TGG | - | chr2.3:31679591-31679610 | MS.gene90405:intron | 35.0% |
| ! | ATATGAAGCCGTTTCCATTT+TGG | + | chr2.3:31684379-31684398 | None:intergenic | 35.0% |
| ! | ATTGCATGCTTTTCATTGAG+TGG | - | chr2.3:31681485-31681504 | MS.gene90405:intron | 35.0% |
| ! | CAAAAATATTTTGTAGGCCC+TGG | - | chr2.3:31680713-31680732 | MS.gene90405:CDS | 35.0% |
| ! | CATGCAATTAAAGTGTTTCC+AGG | + | chr2.3:31681473-31681492 | None:intergenic | 35.0% |
| ! | CTGAACATTTTGTCTTTTCC+TGG | - | chr2.3:31681452-31681471 | MS.gene90405:intron | 35.0% |
| ! | GCCAAATATTTGGAACATCA+TGG | + | chr2.3:31681320-31681339 | None:intergenic | 35.0% |
| ! | GGTTTGGTTACACAAAGTTT+AGG | + | chr2.3:31681780-31681799 | None:intergenic | 35.0% |
| ! | TTATGTTGCTGTTGCAATTG+TGG | - | chr2.3:31679017-31679036 | MS.gene90405:intron | 35.0% |
| ! | TTCTCTTTTTACTGTTCTGC+CGG | - | chr2.3:31681075-31681094 | MS.gene90405:CDS | 35.0% |
| ! | TTGTTGGTAAAGATGAAACC+GGG | - | chr2.3:31683666-31683685 | MS.gene90405:intron | 35.0% |
| !! | ATGCCTTTTATTGAAGCACT+TGG | - | chr2.3:31680572-31680591 | MS.gene90405:intron | 35.0% |
| !! | ATTTGAAGGAATGGACTGTT+AGG | - | chr2.3:31682086-31682105 | MS.gene90405:intron | 35.0% |
| !! | TGCATTTTAGCCCAAAACAA+AGG | + | chr2.3:31678954-31678973 | None:intergenic | 35.0% |
| !!! | ATGAAGTATGTTTTGGTGAC+TGG | - | chr2.3:31678720-31678739 | MS.gene90405:CDS | 35.0% |
| !!! | ATTTTTTATGGCAACAGGGA+GGG | + | chr2.3:31681948-31681967 | None:intergenic | 35.0% |
| !!! | CCTAGCCATCCATTTTTTAT+TGG | - | chr2.3:31683833-31683852 | MS.gene90405:intron | 35.0% |
| AAACTCCTTTGTATGACTGG+AGG | - | chr2.3:31681383-31681402 | MS.gene90405:intron | 40.0% | |
| AAATGACATCACAACCGCAT+CGG | + | chr2.3:31678978-31678997 | None:intergenic | 40.0% | |
| AACGGCTTCATATCATCCAA+TGG | - | chr2.3:31684386-31684405 | MS.gene90405:CDS | 40.0% | |
| AACTCCACCAAGTCTATCTA+TGG | + | chr2.3:31680877-31680896 | None:intergenic | 40.0% | |
| AATGCCATAGATAGACTTGG+TGG | - | chr2.3:31680870-31680889 | MS.gene90405:intron | 40.0% | |
| ACAATATCATCAACTGGTGC+AGG | + | chr2.3:31683026-31683045 | None:intergenic | 40.0% | |
| ACAGGTTAGAATTGCTATGG+TGG | - | chr2.3:31682236-31682255 | MS.gene90405:intron | 40.0% | |
| AGCAATTGTGAGATTGTCTG+GGG | - | chr2.3:31683272-31683291 | MS.gene90405:intron | 40.0% | |
| AGGATGTTCATTTGTTCACC+TGG | + | chr2.3:31679996-31680015 | None:intergenic | 40.0% | |
| AGTAGTGATGTTATTGTCGC+GGG | + | chr2.3:31679962-31679981 | None:intergenic | 40.0% | |
| AGTTGTGAGTTCAACACTTG+TGG | + | chr2.3:31682204-31682223 | None:intergenic | 40.0% | |
| ATCGAATTGGGTGGAACTAT+AGG | - | chr2.3:31680330-31680349 | MS.gene90405:CDS | 40.0% | |
| ATGATTCTGCATTGCAGACA+TGG | - | chr2.3:31684106-31684125 | MS.gene90405:intron | 40.0% | |
| ATGGATGGATAACCATCACT+TGG | - | chr2.3:31679164-31679183 | MS.gene90405:intron | 40.0% | |
| ATTAGTAATCACCTCGCCAT+AGG | + | chr2.3:31682524-31682543 | None:intergenic | 40.0% | |
| ATTGGTAAACACGCCGTTTA+AGG | + | chr2.3:31684414-31684433 | None:intergenic | 40.0% | |
| CAAATGCTTATAGAGCTGCT+TGG | - | chr2.3:31682625-31682644 | MS.gene90405:intron | 40.0% | |
| CAACGTTGAGAATAGGAACT+AGG | + | chr2.3:31680763-31680782 | None:intergenic | 40.0% | |
| CAAGCAGCTCTATAAGCATT+TGG | + | chr2.3:31682627-31682646 | None:intergenic | 40.0% | |
| CACTACTGGGAAAATTTACC+AGG | - | chr2.3:31679975-31679994 | MS.gene90405:intron | 40.0% | |
| CAGGTTAGAATTGCTATGGT+GGG | - | chr2.3:31682237-31682256 | MS.gene90405:intron | 40.0% | |
| CAGTAGTGATGTTATTGTCG+CGG | + | chr2.3:31679963-31679982 | None:intergenic | 40.0% | |
| CATAGCAATTCTAACCTGTG+AGG | + | chr2.3:31682235-31682254 | None:intergenic | 40.0% | |
| CCTGTCACCTTGTTAATGAA+GGG | - | chr2.3:31683218-31683237 | MS.gene90405:CDS | 40.0% | |
| CGATGTTTGTGTCATCGAAT+TGG | - | chr2.3:31680317-31680336 | MS.gene90405:CDS | 40.0% | |
| CGTTTGTTTGTTCACTTAGG+CGG | - | chr2.3:31679832-31679851 | MS.gene90405:intron | 40.0% | |
| CTCACAGGTTAGAATTGCTA+TGG | - | chr2.3:31682233-31682252 | MS.gene90405:intron | 40.0% | |
| CTGGCATAAATATGACACAC+GGG | + | chr2.3:31682984-31683003 | None:intergenic | 40.0% | |
| GAAGTGTATGTCCTAGATGA+TGG | - | chr2.3:31679615-31679634 | MS.gene90405:intron | 40.0% | |
| GAGAAAATACCTGAGAAGAG+GGG | + | chr2.3:31683905-31683924 | None:intergenic | 40.0% | |
| GAGAGAAGAGGAGATTATCT+TGG | - | chr2.3:31680106-31680125 | MS.gene90405:intron | 40.0% | |
| GATCTTGAAGACGTTACCTA+TGG | - | chr2.3:31682505-31682524 | MS.gene90405:intron | 40.0% | |
| GCGACAATAACATCACTACT+GGG | - | chr2.3:31679962-31679981 | MS.gene90405:intron | 40.0% | |
| GTTATTGAGAAGGAGAGAAG+AGG | - | chr2.3:31680094-31680113 | MS.gene90405:intron | 40.0% | |
| GTTCCTATTCTCAACGTTGT+TGG | - | chr2.3:31680764-31680783 | MS.gene90405:intron | 40.0% | |
| GTTGGTTGCATCTTTACAAG+TGG | - | chr2.3:31680899-31680918 | MS.gene90405:CDS | 40.0% | |
| TACGAGTAAAGATGCAATGG+GGG | - | chr2.3:31683562-31683581 | MS.gene90405:CDS | 40.0% | |
| TAGTTCCTCCAGTCATACAA+AGG | + | chr2.3:31681391-31681410 | None:intergenic | 40.0% | |
| TATGACAAACATTACCTGCG+CGG | + | chr2.3:31680610-31680629 | None:intergenic | 40.0% | |
| TCCTGTCACCTTGTTAATGA+AGG | - | chr2.3:31683217-31683236 | MS.gene90405:CDS | 40.0% | |
| TGGAACTCTCGAACAATAAG+GGG | - | chr2.3:31679208-31679227 | MS.gene90405:intron | 40.0% | |
| TGGCATAAATATGACACACG+GGG | + | chr2.3:31682983-31683002 | None:intergenic | 40.0% | |
| TGGCCAAGTGCTTCAATAAA+AGG | + | chr2.3:31680578-31680597 | None:intergenic | 40.0% | |
| TGTACAGGTTAATCCTGACA+TGG | - | chr2.3:31683613-31683632 | MS.gene90405:intron | 40.0% | |
| TTAAACGGCGTGTTTACCAA+TGG | - | chr2.3:31684413-31684432 | MS.gene90405:CDS | 40.0% | |
| TTGAAGGTTGACCTTGATCT+TGG | - | chr2.3:31679904-31679923 | MS.gene90405:intron | 40.0% | |
| ! | AGCACTTCCTATTTTGTGCT+CGG | - | chr2.3:31679419-31679438 | MS.gene90405:intron | 40.0% |
| ! | ATCCTGAAAGCACACCAAAA+TGG | - | chr2.3:31684362-31684381 | MS.gene90405:CDS | 40.0% |
| ! | TGCTCAATTTTGTCATGTGC+CGG | - | chr2.3:31681179-31681198 | MS.gene90405:intron | 40.0% |
| ! | TTCCAATAGTTAACTTGGCG+TGG | + | chr2.3:31684322-31684341 | None:intergenic | 40.0% |
| !! | ATTCCGGTTGATGGTAAAGA+AGG | - | chr2.3:31680288-31680307 | MS.gene90405:CDS | 40.0% |
| !! | TGAAAGCATTAAACCTGCCA+GGG | - | chr2.3:31681593-31681612 | MS.gene90405:CDS | 40.0% |
| !! | TTCCATTTTGGTGTGCTTTC+AGG | + | chr2.3:31684367-31684386 | None:intergenic | 40.0% |
| !! | TTCCGGTTGATGGTAAAGAA+GGG | - | chr2.3:31680289-31680308 | MS.gene90405:CDS | 40.0% |
| !! | TTTGTCATTCTGGTTCCTGT+TGG | - | chr2.3:31684033-31684052 | MS.gene90405:intron | 40.0% |
| !! | TTTTGGTGTGCTTTCAGGAT+TGG | + | chr2.3:31684362-31684381 | None:intergenic | 40.0% |
| !!! | AAGTATGTTTTGGTGACTGG+TGG | - | chr2.3:31678723-31678742 | MS.gene90405:CDS | 40.0% |
| !!! | AGTGCTGGTCTATCTTTTGT+TGG | - | chr2.3:31683650-31683669 | MS.gene90405:intron | 40.0% |
| !!! | GATTTTTTATGGCAACAGGG+AGG | + | chr2.3:31681949-31681968 | None:intergenic | 40.0% |
| !!! | TAGACTTGGTGGAGTTTTGT+TGG | - | chr2.3:31680881-31680900 | MS.gene90405:intron | 40.0% |
| AAATATGACACACGGGGTCT+TGG | + | chr2.3:31682977-31682996 | None:intergenic | 45.0% | |
| ACAACTATTCTGTGCCTCAC+AGG | - | chr2.3:31682218-31682237 | MS.gene90405:intron | 45.0% | |
| CAATGGCAATGGAGTGTATG+TGG | - | chr2.3:31684430-31684449 | MS.gene90405:CDS | 45.0% | |
| CACATACACTCCATTGCCAT+TGG | + | chr2.3:31684432-31684451 | None:intergenic | 45.0% | |
| CAGATTTGCAGTCAGCAACT+TGG | + | chr2.3:31683148-31683167 | None:intergenic | 45.0% | |
| CATATCTCGGCATTTGCTTG+GGG | - | chr2.3:31682872-31682891 | MS.gene90405:CDS | 45.0% | |
| CCATATCTCGGCATTTGCTT+GGG | - | chr2.3:31682871-31682890 | MS.gene90405:CDS | 45.0% | |
| CCCTTCATTAACAAGGTGAC+AGG | + | chr2.3:31683221-31683240 | None:intergenic | 45.0% | |
| CGCGACAATAACATCACTAC+TGG | - | chr2.3:31679961-31679980 | MS.gene90405:intron | 45.0% | |
| CTGGCAGGTTTAATGCTTTC+AGG | + | chr2.3:31681594-31681613 | None:intergenic | 45.0% | |
| GAACTATGCGTCTTGGTTCA+AGG | - | chr2.3:31683111-31683130 | MS.gene90405:intron | 45.0% | |
| GAATGAATGTGGAAGGGAAC+TGG | + | chr2.3:31684145-31684164 | None:intergenic | 45.0% | |
| GCAATTGTGAGATTGTCTGG+GGG | - | chr2.3:31683273-31683292 | MS.gene90405:intron | 45.0% | |
| GGAACTTGACGACAATGCTA+AGG | - | chr2.3:31681149-31681168 | MS.gene90405:intron | 45.0% | |
| GGACTTCTTCTTCAAGCATG+CGG | - | chr2.3:31678789-31678808 | MS.gene90405:CDS | 45.0% | |
| GGAGTTACTGCTAGCAGTAT+TGG | - | chr2.3:31678768-31678787 | MS.gene90405:CDS | 45.0% | |
| GGTTCAAAGACACATATGGG+CGG | - | chr2.3:31683089-31683108 | MS.gene90405:intron | 45.0% | |
| GTCAAGTAAATAGCGCCAAC+AGG | + | chr2.3:31684051-31684070 | None:intergenic | 45.0% | |
| GTTCGTCAACTCAGAGGATT+AGG | - | chr2.3:31680996-31681015 | MS.gene90405:intron | 45.0% | |
| GTTTGTGTCATCGAATTGGG+TGG | - | chr2.3:31680321-31680340 | MS.gene90405:CDS | 45.0% | |
| TAACAGATGCCATCCAAGAG+TGG | - | chr2.3:31680247-31680266 | MS.gene90405:CDS | 45.0% | |
| TACCTGCGCGGTAAGAAAAT+TGG | + | chr2.3:31680598-31680617 | None:intergenic | 45.0% | |
| TATTGGCGTTCAGTTTCACC+CGG | - | chr2.3:31683850-31683869 | MS.gene90405:intron | 45.0% | |
| TCCATATCTCGGCATTTGCT+TGG | - | chr2.3:31682870-31682889 | MS.gene90405:CDS | 45.0% | |
| TCGCCAACAACGTTGAGAAT+AGG | + | chr2.3:31680770-31680789 | None:intergenic | 45.0% | |
| TCTAGCTGAGATACCATGTC+AGG | + | chr2.3:31683629-31683648 | None:intergenic | 45.0% | |
| TGGATGGCATCTGTTATGTG+TGG | + | chr2.3:31680243-31680262 | None:intergenic | 45.0% | |
| TTACCTCACCACCATCATCT+AGG | + | chr2.3:31679629-31679648 | None:intergenic | 45.0% | |
| ! | AGCTGCTTGGAGTCTTTTGA+AGG | - | chr2.3:31682638-31682657 | MS.gene90405:intron | 45.0% |
| ! | AGGCCCTGGAAACTTTTGTT+TGG | - | chr2.3:31680727-31680746 | MS.gene90405:intron | 45.0% |
| ! | GCTATGGTGGGAAAATACAC+CGG | - | chr2.3:31682249-31682268 | MS.gene90405:intron | 45.0% |
| ! | GTGTATGTCCTAGATGATGG+TGG | - | chr2.3:31679618-31679637 | MS.gene90405:intron | 45.0% |
| !! | AATGGAGTTCTAGTTCCAGG+TGG | - | chr2.3:31682784-31682803 | MS.gene90405:intron | 45.0% |
| !! | CTGAAAGCATTAAACCTGCC+AGG | - | chr2.3:31681592-31681611 | MS.gene90405:CDS | 45.0% |
| !! | GAGTTTTGTCAAACGAACCC+TGG | + | chr2.3:31681613-31681632 | None:intergenic | 45.0% |
| !! | GCAAATGGAGTTCTAGTTCC+AGG | - | chr2.3:31682781-31682800 | MS.gene90405:intron | 45.0% |
| !!! | GTTCTAGTTCCAGGTGGTTT+TGG | - | chr2.3:31682790-31682809 | MS.gene90405:intron | 45.0% |
| !!! | AAATCATTTTAATTAAATAA+AGG | + | chr2.3:31680525-31680544 | None:intergenic | 5.0% |
| AAACCTTCTCCCCTCTTCTC+AGG | - | chr2.3:31683893-31683912 | MS.gene90405:intron | 50.0% | |
| ACAGCGACAAGCAAGGAGAT+TGG | + | chr2.3:31681030-31681049 | None:intergenic | 50.0% | |
| ACGCTCTATCCACTCTTGGA+TGG | + | chr2.3:31680259-31680278 | None:intergenic | 50.0% | |
| AGAGCGTGTAGCACAGATTC+CGG | - | chr2.3:31680272-31680291 | MS.gene90405:CDS | 50.0% | |
| AGCGACAAGCAAGGAGATTG+GGG | + | chr2.3:31681028-31681047 | None:intergenic | 50.0% | |
| ATACCTGAGAAGAGGGGAGA+AGG | + | chr2.3:31683899-31683918 | None:intergenic | 50.0% | |
| CACAGTGTTCGTCAACTCAG+AGG | - | chr2.3:31680990-31681009 | MS.gene90405:intron | 50.0% | |
| CACGCCGTTTAAGGATCCAT+TGG | + | chr2.3:31684405-31684424 | None:intergenic | 50.0% | |
| CAGCGACAAGCAAGGAGATT+GGG | + | chr2.3:31681029-31681048 | None:intergenic | 50.0% | |
| CCCAAGCAAATGCCGAGATA+TGG | + | chr2.3:31682874-31682893 | None:intergenic | 50.0% | |
| CCTTGCTTGTCGCTGTTCAA+AGG | - | chr2.3:31681034-31681053 | MS.gene90405:intron | 50.0% | |
| CCTTTGAACAGCGACAAGCA+AGG | + | chr2.3:31681037-31681056 | None:intergenic | 50.0% | |
| CTACACGCTCTATCCACTCT+TGG | + | chr2.3:31680263-31680282 | None:intergenic | 50.0% | |
| CTGTCCCAAATAGGACCAGA+AGG | - | chr2.3:31681555-31681574 | MS.gene90405:intron | 50.0% | |
| GAGTTTGCGCGATCTGTTCT+CGG | - | chr2.3:31682913-31682932 | MS.gene90405:CDS | 50.0% | |
| GCGACATCGGCATAGATATG+AGG | - | chr2.3:31683509-31683528 | MS.gene90405:intron | 50.0% | |
| GGCAATGGAGTGTATGTGGA+TGG | - | chr2.3:31684434-31684453 | MS.gene90405:CDS | 50.0% | |
| GGCCACGCCAAGTTAACTAT+TGG | - | chr2.3:31684317-31684336 | MS.gene90405:intron | 50.0% | |
| GGCCCTTCTTTACCATCAAC+CGG | + | chr2.3:31680294-31680313 | None:intergenic | 50.0% | |
| GGCGTGTTTACCAATGGCAA+TGG | - | chr2.3:31684419-31684438 | MS.gene90405:CDS | 50.0% | |
| GTAGCACAGATTCCGGTTGA+TGG | - | chr2.3:31680279-31680298 | MS.gene90405:CDS | 50.0% | |
| GTCCAACAACACGTTAGGCA+TGG | + | chr2.3:31680050-31680069 | None:intergenic | 50.0% | |
| TCCCTACCTGAACACTGATG+CGG | - | chr2.3:31679566-31679585 | MS.gene90405:intron | 50.0% | |
| TCGATGACACAAACATCGGC+AGG | + | chr2.3:31680315-31680334 | None:intergenic | 50.0% | |
| TCTCAACGTTGTTGGCGAAC+AGG | - | chr2.3:31680772-31680791 | MS.gene90405:intron | 50.0% | |
| TGAAGACGTTACCTATGGCG+AGG | - | chr2.3:31682510-31682529 | MS.gene90405:intron | 50.0% | |
| TGACGAACACTGTGCTGAGT+TGG | + | chr2.3:31680984-31681003 | None:intergenic | 50.0% | |
| TGCCATGCCTAACGTGTTGT+TGG | - | chr2.3:31680045-31680064 | MS.gene90405:CDS | 50.0% | |
| TGCGCCTTCTGGTCCTATTT+GGG | + | chr2.3:31681562-31681581 | None:intergenic | 50.0% | |
| TGCTGTTGCAATTGTGGCTG+CGG | - | chr2.3:31679023-31679042 | MS.gene90405:intron | 50.0% | |
| TTTGTCAAACGAACCCTGGC+AGG | + | chr2.3:31681609-31681628 | None:intergenic | 50.0% | |
| ! | AAGAGGCCAGTGCTGAGTAA+CGG | - | chr2.3:31684296-31684315 | MS.gene90405:intron | 50.0% |
| ! | GCTCTGTTGATGAGCGACAT+CGG | - | chr2.3:31683496-31683515 | MS.gene90405:intron | 50.0% |
| ! | GTATCTCAGCTAGAGAGTGC+TGG | - | chr2.3:31683635-31683654 | MS.gene90405:intron | 50.0% |
| ! | GTTGTGAGTGGACTTGGGAA+AGG | - | chr2.3:31678747-31678766 | MS.gene90405:CDS | 50.0% |
| ! | TTGGTGACAGAGGAGTGCAA+GGG | - | chr2.3:31682809-31682828 | MS.gene90405:intron | 50.0% |
| ! | TTTGGTGACAGAGGAGTGCA+AGG | - | chr2.3:31682808-31682827 | MS.gene90405:intron | 50.0% |
| !! | GTGGTGTTGTGAGTGGACTT+GGG | - | chr2.3:31678742-31678761 | MS.gene90405:CDS | 50.0% |
| !! | TGTCCTAGATGATGGTGGTG+AGG | - | chr2.3:31679623-31679642 | MS.gene90405:intron | 50.0% |
| !! | TTACTCAGCACTGGCCTCTT+CGG | + | chr2.3:31684296-31684315 | None:intergenic | 50.0% |
| AAGAGGGGAGAAGGTTTCCC+TGG | + | chr2.3:31683890-31683909 | None:intergenic | 55.0% | |
| ACGTCTTCAAGATCCCCAGC+TGG | + | chr2.3:31682499-31682518 | None:intergenic | 55.0% | |
| ACTCCATTTGCACCCTGCAG+CGG | + | chr2.3:31682772-31682791 | None:intergenic | 55.0% | |
| AGATGAAACCGGGAGTCGCA+TGG | - | chr2.3:31683676-31683695 | MS.gene90405:intron | 55.0% | |
| ATGGGCGGAACTATGCGTCT+TGG | - | chr2.3:31683104-31683123 | MS.gene90405:intron | 55.0% | |
| CCCGCATCAGTGTTCAGGTA+GGG | + | chr2.3:31679570-31679589 | None:intergenic | 55.0% | |
| CCCTACCTGAACACTGATGC+GGG | - | chr2.3:31679567-31679586 | MS.gene90405:intron | 55.0% | |
| CCTACCTGAACACTGATGCG+GGG | - | chr2.3:31679568-31679587 | MS.gene90405:intron | 55.0% | |
| CCTCTGTCACCAAAACCACC+TGG | + | chr2.3:31682802-31682821 | None:intergenic | 55.0% | |
| CCTGGTCTGGACTTGAACTC+CGG | + | chr2.3:31683872-31683891 | None:intergenic | 55.0% | |
| CGGAGTTCAAGTCCAGACCA+GGG | - | chr2.3:31683870-31683889 | MS.gene90405:intron | 55.0% | |
| CTGGTCTGGACTTGAACTCC+GGG | + | chr2.3:31683871-31683890 | None:intergenic | 55.0% | |
| GGGCTAAAATGCAGCCGATG+CGG | - | chr2.3:31678961-31678980 | MS.gene90405:intron | 55.0% | |
| GTGCGCCTTCTGGTCCTATT+TGG | + | chr2.3:31681563-31681582 | None:intergenic | 55.0% | |
| TTGTCCCCGCATCAGTGTTC+AGG | + | chr2.3:31679575-31679594 | None:intergenic | 55.0% | |
| ! | GGCCAATTTTCTTACCGCGC+AGG | - | chr2.3:31680593-31680612 | MS.gene90405:intron | 55.0% |
| !! | ATTGTGGACTGGGTTCCAGC+TGG | - | chr2.3:31682481-31682500 | MS.gene90405:intron | 55.0% |
| !! | GGTGGTGTTGTGAGTGGACT+TGG | - | chr2.3:31678741-31678760 | MS.gene90405:CDS | 55.0% |
| !! | GTGACTGGTGGTGTTGTGAG+TGG | - | chr2.3:31678735-31678754 | MS.gene90405:CDS | 55.0% |
| !! | TTGTGGACTGGGTTCCAGCT+GGG | - | chr2.3:31682482-31682501 | MS.gene90405:intron | 55.0% |
| !!! | CCAGGTGGTTTTGGTGACAG+AGG | - | chr2.3:31682799-31682818 | MS.gene90405:intron | 55.0% |
| AAGCAGCTTGCGAGCCGAAG+AGG | - | chr2.3:31684279-31684298 | MS.gene90405:intron | 60.0% | |
| ACACACCTCCATGCGACTCC+CGG | + | chr2.3:31683687-31683706 | None:intergenic | 60.0% | |
| ACACACGGGGTCTTGGCTTC+AGG | + | chr2.3:31682970-31682989 | None:intergenic | 60.0% | |
| ACTCCGCTGCAGGGTGCAAA+TGG | - | chr2.3:31682766-31682785 | MS.gene90405:intron | 60.0% | |
| CCCCGCATCAGTGTTCAGGT+AGG | + | chr2.3:31679571-31679590 | None:intergenic | 60.0% | |
| CCGGAGTTCAAGTCCAGACC+AGG | - | chr2.3:31683869-31683888 | MS.gene90405:intron | 60.0% | |
| CTGCAGCGGAGTCCATACAC+CGG | + | chr2.3:31682758-31682777 | None:intergenic | 60.0% | |
| GGGAGAAGGTTTCCCTGGTC+TGG | + | chr2.3:31683885-31683904 | None:intergenic | 60.0% | |
| GGTGTATGGACTCCGCTGCA+GGG | - | chr2.3:31682757-31682776 | MS.gene90405:intron | 60.0% | |
| TGAAACCGGGAGTCGCATGG+AGG | - | chr2.3:31683679-31683698 | MS.gene90405:intron | 60.0% | |
| !! | TGTGGACTGGGTTCCAGCTG+GGG | - | chr2.3:31682483-31682502 | MS.gene90405:intron | 60.0% |
| CGGTGTATGGACTCCGCTGC+AGG | - | chr2.3:31682756-31682775 | MS.gene90405:intron | 65.0% | |
| GCGTGGCCGTTACTCAGCAC+TGG | + | chr2.3:31684305-31684324 | None:intergenic | 65.0% | |
| GGCAACAGGGAGGGAGAGCA+TGG | + | chr2.3:31681939-31681958 | None:intergenic | 65.0% | |
| !! | GGATCGACTCGTGCGCCTTC+TGG | + | chr2.3:31681573-31681592 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 31678720 | 31684466 | 31678720 | ID=MS.gene90405 |
| chr2.3 | mRNA | 31678720 | 31684466 | 31678720 | ID=MS.gene90405.t1;Parent=MS.gene90405 |
| chr2.3 | exon | 31684349 | 31684466 | 31684349 | ID=MS.gene90405.t1.exon1;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31684349 | 31684466 | 31684349 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31683542 | 31683621 | 31683542 | ID=MS.gene90405.t1.exon2;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31683542 | 31683621 | 31683542 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31683190 | 31683276 | 31683190 | ID=MS.gene90405.t1.exon3;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31683190 | 31683276 | 31683190 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31683045 | 31683095 | 31683045 | ID=MS.gene90405.t1.exon4;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31683045 | 31683095 | 31683045 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31682835 | 31682952 | 31682835 | ID=MS.gene90405.t1.exon5;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31682835 | 31682952 | 31682835 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31682572 | 31682628 | 31682572 | ID=MS.gene90405.t1.exon6;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31682572 | 31682628 | 31682572 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31682393 | 31682457 | 31682393 | ID=MS.gene90405.t1.exon7;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31682393 | 31682457 | 31682393 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31682131 | 31682214 | 31682131 | ID=MS.gene90405.t1.exon8;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31682131 | 31682214 | 31682131 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31681986 | 31682036 | 31681986 | ID=MS.gene90405.t1.exon9;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31681986 | 31682036 | 31681986 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31681827 | 31681889 | 31681827 | ID=MS.gene90405.t1.exon10;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31681827 | 31681889 | 31681827 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31681572 | 31681618 | 31681572 | ID=MS.gene90405.t1.exon11;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31681572 | 31681618 | 31681572 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31681048 | 31681117 | 31681048 | ID=MS.gene90405.t1.exon12;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31681048 | 31681117 | 31681048 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31680884 | 31680946 | 31680884 | ID=MS.gene90405.t1.exon13;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31680884 | 31680946 | 31680884 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31680655 | 31680744 | 31680655 | ID=MS.gene90405.t1.exon14;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31680655 | 31680744 | 31680655 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31680527 | 31680565 | 31680527 | ID=MS.gene90405.t1.exon15;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31680527 | 31680565 | 31680527 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31680181 | 31680408 | 31680181 | ID=MS.gene90405.t1.exon16;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31680181 | 31680408 | 31680181 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31680012 | 31680097 | 31680012 | ID=MS.gene90405.t1.exon17;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31680012 | 31680097 | 31680012 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31679656 | 31679704 | 31679656 | ID=MS.gene90405.t1.exon18;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31679656 | 31679704 | 31679656 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31679486 | 31679566 | 31679486 | ID=MS.gene90405.t1.exon19;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31679486 | 31679566 | 31679486 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31679272 | 31679365 | 31679272 | ID=MS.gene90405.t1.exon20;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31679272 | 31679365 | 31679272 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| chr2.3 | exon | 31678720 | 31678916 | 31678720 | ID=MS.gene90405.t1.exon21;Parent=MS.gene90405.t1 |
| chr2.3 | CDS | 31678720 | 31678916 | 31678720 | ID=cds.MS.gene90405.t1;Parent=MS.gene90405.t1 |
| Gene Sequence |
| Protein sequence |
