Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008780.t1 | XP_003628956.1 | 98.5 | 585 | 9 | 0 | 1 | 585 | 1 | 585 | 0.00E+00 | 1180.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008780.t1 | Q54V77 | 58.5 | 568 | 216 | 6 | 1 | 550 | 1 | 566 | 2.1e-191 | 670.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008780.t1 | G7LJD6 | 98.5 | 585 | 9 | 0 | 1 | 585 | 1 | 585 | 0.0e+00 | 1180.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene008780 | MS.gene065843 | PPI |
MS.gene59897 | MS.gene008780 | PPI |
MS.gene008780 | MS.gene066907 | PPI |
MS.gene008780 | MS.gene07260 | PPI |
MS.gene008780 | MS.gene90405 | PPI |
MS.gene008780 | MS.gene60914 | PPI |
MS.gene008780 | MS.gene92237 | PPI |
MS.gene067242 | MS.gene008780 | PPI |
MS.gene008780 | MS.gene20832 | PPI |
MS.gene008780 | MS.gene005541 | PPI |
MS.gene008780 | MS.gene000841 | PPI |
MS.gene008780 | MS.gene20781 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008780.t1 | MTR_8g070540 | 97.204 | 608 | 9 | 1 | 1 | 600 | 1 | 608 | 0.0 | 1221 |
MS.gene008780.t1 | MTR_8g070540 | 96.798 | 531 | 9 | 1 | 78 | 600 | 1 | 531 | 0.0 | 1068 |
MS.gene008780.t1 | MTR_8g070540 | 98.965 | 483 | 5 | 0 | 1 | 483 | 1 | 483 | 0.0 | 990 |
MS.gene008780.t1 | MTR_2g062770 | 75.500 | 600 | 133 | 2 | 1 | 595 | 1 | 591 | 0.0 | 935 |
MS.gene008780.t1 | MTR_8g446910 | 79.781 | 549 | 111 | 0 | 1 | 549 | 1 | 549 | 0.0 | 933 |
MS.gene008780.t1 | MTR_2g062770 | 73.684 | 551 | 131 | 2 | 50 | 595 | 1 | 542 | 0.0 | 843 |
MS.gene008780.t1 | MTR_1g087440 | 71.014 | 552 | 160 | 0 | 1 | 552 | 1 | 552 | 0.0 | 831 |
MS.gene008780.t1 | MTR_1g087440 | 71.064 | 470 | 136 | 0 | 1 | 470 | 1 | 470 | 0.0 | 694 |
MS.gene008780.t1 | MTR_7g069680 | 83.636 | 55 | 9 | 0 | 545 | 599 | 27 | 81 | 7.86e-17 | 75.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008780.t1 | AT1G30820 | 80.824 | 558 | 107 | 0 | 1 | 558 | 1 | 558 | 0.0 | 944 |
MS.gene008780.t1 | AT4G20320 | 79.354 | 557 | 115 | 0 | 1 | 557 | 1 | 557 | 0.0 | 930 |
MS.gene008780.t1 | AT4G20320 | 79.354 | 557 | 115 | 0 | 1 | 557 | 1 | 557 | 0.0 | 930 |
MS.gene008780.t1 | AT4G20320 | 79.354 | 557 | 115 | 0 | 1 | 557 | 1 | 557 | 0.0 | 930 |
MS.gene008780.t1 | AT4G20320 | 79.354 | 557 | 115 | 0 | 1 | 557 | 1 | 557 | 0.0 | 930 |
MS.gene008780.t1 | AT4G20320 | 79.354 | 557 | 115 | 0 | 1 | 557 | 1 | 557 | 0.0 | 930 |
MS.gene008780.t1 | AT3G12670 | 74.585 | 602 | 140 | 4 | 1 | 600 | 1 | 591 | 0.0 | 926 |
MS.gene008780.t1 | AT4G20320 | 78.543 | 508 | 109 | 0 | 50 | 557 | 1 | 508 | 0.0 | 863 |
MS.gene008780.t1 | AT2G34890 | 69.631 | 596 | 166 | 2 | 1 | 592 | 1 | 585 | 0.0 | 862 |
MS.gene008780.t1 | AT4G02120 | 70.758 | 554 | 162 | 0 | 1 | 554 | 1 | 554 | 0.0 | 834 |
MS.gene008780.t1 | AT4G02120 | 68.056 | 576 | 162 | 1 | 1 | 554 | 1 | 576 | 0.0 | 825 |
MS.gene008780.t1 | AT4G02120 | 68.051 | 554 | 138 | 1 | 1 | 554 | 1 | 515 | 0.0 | 785 |
MS.gene008780.t1 | AT4G02120 | 71.901 | 484 | 136 | 0 | 1 | 484 | 1 | 484 | 0.0 | 736 |
MS.gene008780.t1 | AT4G02120 | 71.888 | 466 | 131 | 0 | 1 | 466 | 1 | 466 | 0.0 | 706 |
Find 136 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTCCTAATGCTTGAATAAA+AGG | 0.184572 | 8.1:+34128991 | None:intergenic |
TGGAAACTATGAGCGCTTTA+TGG | 0.191360 | 8.1:-34129737 | MS.gene008780:CDS |
CAATAAAACCACATGCTTAT+TGG | 0.209267 | 8.1:-34125348 | MS.gene008780:CDS |
AATTCCGGTCTTTCGTTTAC+TGG | 0.242005 | 8.1:-34126216 | MS.gene008780:CDS |
GCTGGTCTTGATTTAAATTC+AGG | 0.269595 | 8.1:+34126033 | None:intergenic |
TCAAGGCTAGTAACCAAATC+AGG | 0.278669 | 8.1:+34126240 | None:intergenic |
AGACCTTCTCCTTTGTTCTT+AGG | 0.281551 | 8.1:-34126009 | MS.gene008780:intron |
ATTTAAATTCAGGATGGAAT+TGG | 0.301747 | 8.1:+34126043 | None:intergenic |
CAAGTCCATTCCTCTAAATT+AGG | 0.313754 | 8.1:+34127587 | None:intergenic |
TGCTGATGGTGTTCTTGTTC+CGG | 0.314322 | 8.1:-34126949 | MS.gene008780:CDS |
GCAGAACCCTGATGCTTATA+AGG | 0.318792 | 8.1:-34126994 | MS.gene008780:intron |
GAGAGAAGAGGAGACTATTT+AGG | 0.321855 | 8.1:-34129505 | MS.gene008780:CDS |
GCTGATGGTGTTCTTGTTCC+GGG | 0.322777 | 8.1:-34126948 | MS.gene008780:CDS |
GGCAGCATGGAAGTTATTAA+AGG | 0.325780 | 8.1:-34126973 | MS.gene008780:CDS |
AATCCACGGTAAGTTTCTTT+TGG | 0.329843 | 8.1:+34127150 | None:intergenic |
CAGATTTGCATTCCTTGGTC+TGG | 0.339392 | 8.1:+34126559 | None:intergenic |
AATTGGACACCAATAAAATA+AGG | 0.343784 | 8.1:+34126060 | None:intergenic |
CCAATAAAATAAGGATGATT+AGG | 0.346134 | 8.1:+34126069 | None:intergenic |
CCATTGCCATATACATGTTC+TGG | 0.346383 | 8.1:+34125325 | None:intergenic |
CGTGTCACTGCCATCAAAAT+TGG | 0.346945 | 8.1:-34130367 | MS.gene008780:intron |
GTTACTAGCCTTGAAAATTC+CGG | 0.362954 | 8.1:-34126231 | MS.gene008780:CDS |
CATGCTGCCTTATAAGCATC+AGG | 0.376449 | 8.1:+34126987 | None:intergenic |
TATGCAGGTGAACCCTGATT+TGG | 0.380327 | 8.1:-34126253 | MS.gene008780:intron |
AACTCAAGAGCCTAATTTAG+AGG | 0.383993 | 8.1:-34127597 | MS.gene008780:CDS |
TTTACAGTCTGTCATTGATA+AGG | 0.387047 | 8.1:-34129527 | MS.gene008780:intron |
AAAGGAATGTGCCATATGTT+AGG | 0.396926 | 8.1:+34127875 | None:intergenic |
TTTATGATGTTCCTAACATA+TGG | 0.400047 | 8.1:-34127886 | MS.gene008780:CDS |
TATTGGCCAGAACATGTATA+TGG | 0.402429 | 8.1:-34125331 | MS.gene008780:CDS |
ATGAAGTATGTTCTTGTAAC+CGG | 0.407889 | 8.1:-34130463 | MS.gene008780:CDS |
TAAACTTCTCCATGTTCAAT+AGG | 0.410602 | 8.1:+34130034 | None:intergenic |
TTTACTGGAAAGGATGAAAC+TGG | 0.410810 | 8.1:-34126201 | MS.gene008780:CDS |
CCATACCTTGGCATTTGTCT+TGG | 0.413039 | 8.1:-34126858 | MS.gene008780:CDS |
TGATGTATGTGTCATAGAAT+TGG | 0.414144 | 8.1:-34129152 | MS.gene008780:CDS |
TCACCAACAACATTTAAAAC+AGG | 0.420634 | 8.1:+34128633 | None:intergenic |
GTTCTTGTTCCGGGAGGCTT+TGG | 0.420729 | 8.1:-34126939 | MS.gene008780:CDS |
AGGACTGACTCCACAAATCT+TGG | 0.421780 | 8.1:-34128470 | MS.gene008780:CDS |
GGAGTTACTGCTAGTAGTAT+TGG | 0.421969 | 8.1:-34130415 | MS.gene008780:CDS |
TTTAAAGTGCTGAACCTTCA+AGG | 0.424219 | 8.1:-34127731 | MS.gene008780:CDS |
AATGGCAATATCAATGGAAA+TGG | 0.435672 | 8.1:-34125307 | MS.gene008780:CDS |
AAAAGAAACTTACCGTGGAT+TGG | 0.438164 | 8.1:-34127148 | MS.gene008780:CDS |
AGATTTGTGGAGTCAGTCCT+TGG | 0.442781 | 8.1:+34128473 | None:intergenic |
CCTTTCTATCCAATCTTGAA+TGG | 0.443967 | 8.1:+34129213 | None:intergenic |
TTACTGATGCCATTCAAGAT+TGG | 0.445967 | 8.1:-34129222 | MS.gene008780:CDS |
TGAAAGGTGGACCTGGATCT+TGG | 0.448072 | 8.1:-34129757 | MS.gene008780:intron |
CCGGGAGGCTTTGGTGATAG+AGG | 0.449689 | 8.1:-34126930 | MS.gene008780:CDS |
CTGTAGTTATGTTATTATCA+CGG | 0.451040 | 8.1:+34129701 | None:intergenic |
GTAACCGGTGGAGTTGTTAG+TGG | 0.456269 | 8.1:-34130448 | MS.gene008780:CDS |
TGTAGTTATGTTATTATCAC+GGG | 0.456833 | 8.1:+34129702 | None:intergenic |
CCAGCATCTGTGTTCAAGTA+AGG | 0.467447 | 8.1:+34130067 | None:intergenic |
CGGTCTTTCGTTTACTGGAA+AGG | 0.473114 | 8.1:-34126211 | MS.gene008780:CDS |
GGTGGAGTTGTTAGTGGACT+TGG | 0.477877 | 8.1:-34130442 | MS.gene008780:CDS |
GGTTTGCTTCTCAAAGCTTG+TGG | 0.480162 | 8.1:-34130394 | MS.gene008780:CDS |
GTTGTTAGTGGACTTGGTAA+AGG | 0.481482 | 8.1:-34130436 | MS.gene008780:CDS |
CGAAGATGCAACTGCAAAAG+AGG | 0.481676 | 8.1:-34127108 | MS.gene008780:intron |
CCATTCAAGATTGGATAGAA+AGG | 0.482265 | 8.1:-34129213 | MS.gene008780:CDS |
TATGGCAATGGCAATATCAA+TGG | 0.482274 | 8.1:-34125313 | MS.gene008780:CDS |
CCTTACTTGAACACAGATGC+TGG | 0.484908 | 8.1:-34130067 | MS.gene008780:CDS |
TTAGTGAGACTAACCCTTGA+AGG | 0.493644 | 8.1:+34127717 | None:intergenic |
CCTCTCACACTATGCTGTGT+TGG | 0.496331 | 8.1:+34128505 | None:intergenic |
GAAGTTTATGTGTTAGATGA+TGG | 0.506063 | 8.1:-34130019 | MS.gene008780:CDS |
GCAGCATGGAAGTTATTAAA+GGG | 0.507167 | 8.1:-34126972 | MS.gene008780:CDS |
TTAAAGTGCTGAACCTTCAA+GGG | 0.509723 | 8.1:-34127730 | MS.gene008780:intron |
CTGCGGCAAGCCAAGATTTG+TGG | 0.514033 | 8.1:+34128460 | None:intergenic |
CGTGATAATAACATAACTAC+AGG | 0.519716 | 8.1:-34129700 | MS.gene008780:CDS |
ATGGGTGGTACCATGCGTCT+TGG | 0.522031 | 8.1:-34126600 | MS.gene008780:CDS |
TGCAGTTGCATCTTCGAGGT+TGG | 0.522120 | 8.1:+34127115 | None:intergenic |
TCTATGACACATACATCAGC+TGG | 0.524114 | 8.1:+34129157 | None:intergenic |
GTACCATGCGTCTTGGATCA+AGG | 0.530415 | 8.1:-34126593 | MS.gene008780:CDS |
CCAAGACAAATGCCAAGGTA+TGG | 0.530809 | 8.1:+34126858 | None:intergenic |
GAGTTTGCACGATCTGTGCT+TGG | 0.532846 | 8.1:-34126816 | MS.gene008780:CDS |
GCTCATAGTTTCCAAGATCC+AGG | 0.534065 | 8.1:+34129746 | None:intergenic |
CAAGGCTAGTAACCAAATCA+GGG | 0.538674 | 8.1:+34126241 | None:intergenic |
CGACACTCTTCAAGAGGAGT+AGG | 0.538990 | 8.1:-34125412 | MS.gene008780:CDS |
AAGAGCCTAATTTAGAGGAA+TGG | 0.540241 | 8.1:-34127592 | MS.gene008780:CDS |
AACAAAGGAGAAGGTCTCGC+TGG | 0.542869 | 8.1:+34126015 | None:intergenic |
TGAATGGCATCAGTAATATG+AGG | 0.545834 | 8.1:+34129229 | None:intergenic |
TACGAAAACATACCGGAAGC+AGG | 0.547623 | 8.1:+34128004 | None:intergenic |
ATAGAATTGGGTGGAACCAT+AGG | 0.547655 | 8.1:-34129139 | MS.gene008780:intron |
GTCTTGATTTAAATTCAGGA+TGG | 0.549077 | 8.1:+34126037 | None:intergenic |
CTCTGGTCTATAGGATCAGA+AGG | 0.551306 | 8.1:-34127768 | MS.gene008780:intron |
GGGTTTATTGCAGCAGCATG+TGG | 0.551774 | 8.1:-34125454 | MS.gene008780:CDS |
ATACCAGTGGATGGAAAAGA+AGG | 0.554549 | 8.1:-34129181 | MS.gene008780:CDS |
GTGAGAGGACTTAGAAGCCA+AGG | 0.556118 | 8.1:-34128490 | MS.gene008780:CDS |
CAGGTTCGTATAGCGATAGT+CGG | 0.558806 | 8.1:-34127449 | MS.gene008780:CDS |
TAATGCTTGAATAAAAGGCA+TGG | 0.559126 | 8.1:+34128996 | None:intergenic |
AGGTTCGTATAGCGATAGTC+GGG | 0.560772 | 8.1:-34127448 | MS.gene008780:CDS |
GGACATTTCTCATATAGAGT+AGG | 0.562572 | 8.1:-34128973 | MS.gene008780:intron |
GATGTATGTGTCATAGAATT+GGG | 0.563816 | 8.1:-34129151 | MS.gene008780:CDS |
CATTCAAGATTGGATAGAAA+GGG | 0.564546 | 8.1:-34129212 | MS.gene008780:CDS |
CCTCTATCACCAAAGCCTCC+CGG | 0.564923 | 8.1:+34126930 | None:intergenic |
GAGACATCGGCATAGATATG+AGG | 0.565174 | 8.1:-34126347 | MS.gene008780:intron |
ACTAACAGAAGCATGAACTA+AGG | 0.565322 | 8.1:+34127175 | None:intergenic |
CACCTTTGTAACTGAGAGGT+AGG | 0.566583 | 8.1:+34127403 | None:intergenic |
CTTTCCAGTAAACGAAAGAC+CGG | 0.567640 | 8.1:+34126212 | None:intergenic |
GCAGTCAAAACATGTCAGAA+TGG | 0.570788 | 8.1:-34125376 | MS.gene008780:CDS |
CCAGAACATGTATATGGCAA+TGG | 0.572749 | 8.1:-34125325 | MS.gene008780:CDS |
GTCTTACGACACTCTTCAAG+AGG | 0.577357 | 8.1:-34125418 | MS.gene008780:CDS |
AAACTTACTCTTAAAAGCAA+AGG | 0.580216 | 8.1:+34127857 | None:intergenic |
GGATGAAACTGGTCAACGCA+TGG | 0.581512 | 8.1:-34126190 | MS.gene008780:CDS |
CTTGGCTTGCCGCAGCACAA+TGG | 0.588594 | 8.1:-34128452 | MS.gene008780:intron |
GTCATTGATAAGGAGAGAAG+AGG | 0.590908 | 8.1:-34129517 | MS.gene008780:CDS |
GTGGCCCACATACCAGTGGA+TGG | 0.599867 | 8.1:-34129190 | MS.gene008780:CDS |
AAGTATGTTCTTGTAACCGG+TGG | 0.608203 | 8.1:-34130460 | MS.gene008780:CDS |
CCAACACAGCATAGTGTGAG+AGG | 0.610305 | 8.1:-34128505 | MS.gene008780:CDS |
CTGATGCTTATAAGGCAGCA+TGG | 0.613552 | 8.1:-34126986 | MS.gene008780:CDS |
GAAAACAGAATTCCATACCT+TGG | 0.619328 | 8.1:-34126870 | MS.gene008780:CDS |
ATGCTGCCTTATAAGCATCA+GGG | 0.622421 | 8.1:+34126988 | None:intergenic |
TTTGGTGATAGAGGAGTGCA+AGG | 0.626983 | 8.1:-34126921 | MS.gene008780:CDS |
GCATTCCAAGACAAATGCCA+AGG | 0.627002 | 8.1:+34126853 | None:intergenic |
ATACCTAAGAACAAAGGAGA+AGG | 0.627103 | 8.1:+34126006 | None:intergenic |
TCAGGCATGAATATGACGCA+TGG | 0.630805 | 8.1:+34126747 | None:intergenic |
AAGTCCACTAACAACTCCAC+CGG | 0.631580 | 8.1:+34130444 | None:intergenic |
CCTCCTTGATCCAAGACGCA+TGG | 0.632089 | 8.1:+34126590 | None:intergenic |
TTCCTACCTCTCAGTTACAA+AGG | 0.633542 | 8.1:-34127405 | MS.gene008780:intron |
ACAATGTCACCTATTGAACA+TGG | 0.637211 | 8.1:-34130043 | MS.gene008780:CDS |
AAGTTATTAAAGGGTGCTGA+TGG | 0.640365 | 8.1:-34126963 | MS.gene008780:CDS |
GCTTCATTGATGAGAGACAT+CGG | 0.642489 | 8.1:-34126360 | MS.gene008780:CDS |
TCAAGATTGGATAGAAAGGG+TGG | 0.643735 | 8.1:-34129209 | MS.gene008780:CDS |
ATGCGTCATATTCATGCCTG+AGG | 0.644315 | 8.1:-34126745 | MS.gene008780:intron |
GTTTATGTGTTAGATGATGG+TGG | 0.645751 | 8.1:-34130016 | MS.gene008780:CDS |
TTGCCAAAAGAAACTTACCG+TGG | 0.648783 | 8.1:-34127153 | MS.gene008780:CDS |
TATTCACCTTTGTAACTGAG+AGG | 0.649970 | 8.1:+34127399 | None:intergenic |
GGTACTGGATGAGAATGCAA+AGG | 0.651465 | 8.1:-34128046 | MS.gene008780:CDS |
TGTGTTAGATGATGGTGGTG+AGG | 0.651660 | 8.1:-34130011 | MS.gene008780:intron |
GGTAGCTGAAATCCAATCCA+CGG | 0.653489 | 8.1:+34127136 | None:intergenic |
CAACATTTAAAACAGGAACA+AGG | 0.654878 | 8.1:+34128640 | None:intergenic |
TGTTCTGGCCAATAAGCATG+TGG | 0.658134 | 8.1:+34125340 | None:intergenic |
AACTACAGGAAAGATTTACC+AGG | 0.661602 | 8.1:-34129686 | MS.gene008780:intron |
AAGGGTGGCCCACATACCAG+TGG | 0.675486 | 8.1:-34129194 | MS.gene008780:CDS |
AGAGAGTAACCATTGTGCTG+CGG | 0.681776 | 8.1:+34128443 | None:intergenic |
ACATGTATACCTAAGAACAA+AGG | 0.686784 | 8.1:+34126000 | None:intergenic |
GTATGTGTCATAGAATTGGG+TGG | 0.689147 | 8.1:-34129148 | MS.gene008780:CDS |
GAGGACATATTTCCAGACCA+AGG | 0.692543 | 8.1:-34126571 | MS.gene008780:CDS |
GATGGTGTTCTTGTTCCGGG+AGG | 0.722498 | 8.1:-34126945 | MS.gene008780:CDS |
TGAAACTGGTCAACGCATGG+AGG | 0.725488 | 8.1:-34126187 | MS.gene008780:intron |
CCATGCGTCTTGGATCAAGG+AGG | 0.777994 | 8.1:-34126590 | MS.gene008780:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAATAATAAAATTAAAAT+TGG | + | chr8.1:34128245-34128264 | None:intergenic | 0.0% |
!! | ATAATATAATATAATACCAT+TGG | - | chr8.1:34129939-34129958 | MS.gene008780:intron | 10.0% |
!! | CTTTAAACAAAAATAAATAA+TGG | + | chr8.1:34125568-34125587 | None:intergenic | 10.0% |
!!! | TTATTTTCTCAAATTATTAT+CGG | - | chr8.1:34127540-34127559 | MS.gene008780:intron | 10.0% |
!! | AATTTGAATTTAAATTCTTC+TGG | - | chr8.1:34126720-34126739 | MS.gene008780:intron | 15.0% |
!!! | AAGAGTGAAATATTTATTTT+TGG | - | chr8.1:34128437-34128456 | MS.gene008780:intron | 15.0% |
!!! | ATATTTTTATTCCTTGAAAA+TGG | - | chr8.1:34128285-34128304 | MS.gene008780:intron | 15.0% |
!!! | TATTTATTTTTGGCTTTTTT+AGG | + | chr8.1:34125813-34125832 | None:intergenic | 15.0% |
!!! | TCCTTATTTTTATTTTTCAA+TGG | - | chr8.1:34129888-34129907 | MS.gene008780:intron | 15.0% |
!!! | TTAAAGTTTGAATTTTTGAA+GGG | - | chr8.1:34125582-34125601 | MS.gene008780:intron | 15.0% |
!!! | TTTAAAGTTTGAATTTTTGA+AGG | - | chr8.1:34125581-34125600 | MS.gene008780:intron | 15.0% |
!! | AAACATGCACTAAATTAATT+AGG | + | chr8.1:34126297-34126316 | None:intergenic | 20.0% |
!! | ACAAAGATCTTCATAATATA+TGG | - | chr8.1:34126467-34126486 | MS.gene008780:intron | 20.0% |
!! | ATAAAAATAAGGAAATGCAA+TGG | + | chr8.1:34129881-34129900 | None:intergenic | 20.0% |
!! | ATGATCAATTAAAGTTAACA+TGG | + | chr8.1:34129796-34129815 | None:intergenic | 20.0% |
!! | GCCATTGAAAAATAAAAATA+AGG | + | chr8.1:34129892-34129911 | None:intergenic | 20.0% |
!! | TATAAAATCATCTTATCTGT+AGG | - | chr8.1:34127942-34127961 | MS.gene008780:intron | 20.0% |
!! | TGCATTTAATATTTGATATC+AGG | - | chr8.1:34128559-34128578 | MS.gene008780:intron | 20.0% |
!! | TTCAATGAATGAGATTTATT+AGG | - | chr8.1:34129332-34129351 | MS.gene008780:intron | 20.0% |
!!! | AACAAAAATAAATAATGGGT+AGG | + | chr8.1:34125563-34125582 | None:intergenic | 20.0% |
!!! | AATATATGGTTTTGATGTTA+TGG | - | chr8.1:34126481-34126500 | MS.gene008780:intron | 20.0% |
!!! | ACAAAAATAAATAATGGGTA+GGG | + | chr8.1:34125562-34125581 | None:intergenic | 20.0% |
!!! | ATAAGATATACCAATTTTGA+TGG | + | chr8.1:34125403-34125422 | None:intergenic | 20.0% |
!!! | ATTTTTTACATAGATCTCAA+AGG | + | chr8.1:34127178-34127197 | None:intergenic | 20.0% |
!!! | GAAAAGGTTATTTTATATGT+TGG | + | chr8.1:34127215-34127234 | None:intergenic | 20.0% |
!!! | TACAACAATTTAAAACCAAA+GGG | + | chr8.1:34126840-34126859 | None:intergenic | 20.0% |
!!! | TAGTTTTTTTTTTTTTGGAG+AGG | - | chr8.1:34127023-34127042 | MS.gene008780:intron | 20.0% |
!!! | TGTTTTTCTAACTAACAAAA+AGG | + | chr8.1:34130231-34130250 | None:intergenic | 20.0% |
!!! | TTATCTCTTATTTTTCTGAA+AGG | - | chr8.1:34128112-34128131 | MS.gene008780:intron | 20.0% |
!!! | TTTTACAAATTATTTTCCTC+TGG | - | chr8.1:34127972-34127991 | MS.gene008780:intron | 20.0% |
! | AAACAACACATCTAAAAATG+GGG | - | chr8.1:34130069-34130088 | MS.gene008780:CDS | 25.0% |
! | AAACTTACTCTTAAAAGCAA+AGG | + | chr8.1:34127903-34127922 | None:intergenic | 25.0% |
! | AATTGGACACCAATAAAATA+AGG | + | chr8.1:34129700-34129719 | None:intergenic | 25.0% |
! | AATTTAGTGCATGTTTAGAT+CGG | - | chr8.1:34126301-34126320 | MS.gene008780:intron | 25.0% |
! | AGATTCTCAAGATCATTATT+TGG | - | chr8.1:34126151-34126170 | MS.gene008780:intron | 25.0% |
! | ATATCATTACGAAAACATAC+CGG | + | chr8.1:34127763-34127782 | None:intergenic | 25.0% |
! | ATTTAAATTCAGGATGGAAT+TGG | + | chr8.1:34129717-34129736 | None:intergenic | 25.0% |
! | CATGAAATAGAACAAATTGA+GGG | + | chr8.1:34128068-34128087 | None:intergenic | 25.0% |
! | CATTATAGTATATGCACAAA+AGG | - | chr8.1:34127604-34127623 | MS.gene008780:intron | 25.0% |
! | CCAATAAAATAAGGATGATT+AGG | + | chr8.1:34129691-34129710 | None:intergenic | 25.0% |
! | CCATGTAACAACTATAAAAA+CGG | + | chr8.1:34127049-34127068 | None:intergenic | 25.0% |
! | CTGTAGTTATGTTATTATCA+CGG | + | chr8.1:34126059-34126078 | None:intergenic | 25.0% |
! | GAAACAACACATCTAAAAAT+GGG | - | chr8.1:34130068-34130087 | MS.gene008780:CDS | 25.0% |
! | TAATGTCTTACAACACTAAA+TGG | - | chr8.1:34127152-34127171 | MS.gene008780:CDS | 25.0% |
! | TGTAGTTATGTTATTATCAC+GGG | + | chr8.1:34126058-34126077 | None:intergenic | 25.0% |
! | TTATTACATCTTTACACTAG+CGG | + | chr8.1:34126419-34126438 | None:intergenic | 25.0% |
! | TTTACAAAGGTTTGATACTT+TGG | + | chr8.1:34129992-34130011 | None:intergenic | 25.0% |
! | TTTATGATGTTCCTAACATA+TGG | - | chr8.1:34127871-34127890 | MS.gene008780:CDS | 25.0% |
!! | AAGACTTCACATTTTTACAA+AGG | + | chr8.1:34130005-34130024 | None:intergenic | 25.0% |
!! | AGAATTGAGATGTTAACTTT+TGG | - | chr8.1:34130256-34130275 | MS.gene008780:intron | 25.0% |
!! | ATATGATCTTCAACTTTTGT+AGG | - | chr8.1:34129825-34129844 | MS.gene008780:intron | 25.0% |
!! | ATTTTATAGTTCAGCAGTTT+TGG | + | chr8.1:34127930-34127949 | None:intergenic | 25.0% |
!! | CTACAACAATTTAAAACCAA+AGG | + | chr8.1:34126841-34126860 | None:intergenic | 25.0% |
!! | TATTTACAAAGTTTTCCCTT+TGG | - | chr8.1:34126822-34126841 | MS.gene008780:CDS | 25.0% |
!! | TGATGACTCAATATTTTATG+TGG | - | chr8.1:34129286-34129305 | MS.gene008780:intron | 25.0% |
!! | TTCACTCTTTAAAAAATCTC+AGG | + | chr8.1:34128426-34128445 | None:intergenic | 25.0% |
!! | TTCTTACTAGTTGGTTATTT+TGG | - | chr8.1:34125652-34125671 | MS.gene008780:intron | 25.0% |
!! | TTTTTATTGCGGTAAAATAC+AGG | - | chr8.1:34126893-34126912 | MS.gene008780:CDS | 25.0% |
!!! | AGAATCTTGACTCTTTATTT+TGG | - | chr8.1:34125976-34125995 | MS.gene008780:intron | 25.0% |
!!! | ATGGTGTTATTTTCTACTTT+AGG | - | chr8.1:34126500-34126519 | MS.gene008780:intron | 25.0% |
!!! | CAAAAATAAATAATGGGTAG+GGG | + | chr8.1:34125561-34125580 | None:intergenic | 25.0% |
!!! | CCTAATCATCCTTATTTTAT+TGG | - | chr8.1:34129688-34129707 | MS.gene008780:CDS | 25.0% |
!!! | GAATTCTAAAACTGTTATTG+TGG | - | chr8.1:34126951-34126970 | MS.gene008780:CDS | 25.0% |
!!! | GACATGTAAGTTTTAAATTG+TGG | + | chr8.1:34126996-34127015 | None:intergenic | 25.0% |
!!! | TTTAGTTCTAATCGTTTGAA+GGG | - | chr8.1:34125616-34125635 | MS.gene008780:intron | 25.0% |
!!! | TTTGTTTTCTGAACATGAAA+AGG | + | chr8.1:34127231-34127250 | None:intergenic | 25.0% |
!!! | TTTTAGTTCTAATCGTTTGA+AGG | - | chr8.1:34125615-34125634 | MS.gene008780:intron | 25.0% |
!!! | TTTTTTTTCTTTGCTGCAAA+AGG | + | chr8.1:34125452-34125471 | None:intergenic | 25.0% |
AATGATCTCTAGTATTATGC+AGG | - | chr8.1:34129489-34129508 | MS.gene008780:intron | 30.0% | |
AATGGCAATATCAATGGAAA+TGG | - | chr8.1:34130450-34130469 | MS.gene008780:CDS | 30.0% | |
ACATGTATACCTAAGAACAA+AGG | + | chr8.1:34129760-34129779 | None:intergenic | 30.0% | |
ACTAACTCCTTCATATCTTA+TGG | - | chr8.1:34126182-34126201 | MS.gene008780:intron | 30.0% | |
ATAATTCCATGAACATGACA+AGG | + | chr8.1:34126105-34126124 | None:intergenic | 30.0% | |
ATATGCAAGTAAGCATGTTA+GGG | + | chr8.1:34128482-34128501 | None:intergenic | 30.0% | |
ATGAAGTATGTTCTTGTAAC+CGG | - | chr8.1:34125294-34125313 | MS.gene008780:CDS | 30.0% | |
ATGTGATTATTTACTTGCGA+TGG | - | chr8.1:34126919-34126938 | MS.gene008780:CDS | 30.0% | |
ATTTAAATTCTTCTGGATGC+AGG | - | chr8.1:34126727-34126746 | MS.gene008780:intron | 30.0% | |
CAATAAAACCACATGCTTAT+TGG | - | chr8.1:34130409-34130428 | MS.gene008780:CDS | 30.0% | |
CATTCAAGATTGGATAGAAA+GGG | - | chr8.1:34126545-34126564 | MS.gene008780:intron | 30.0% | |
CCATGAAATAGAACAAATTG+AGG | + | chr8.1:34128069-34128088 | None:intergenic | 30.0% | |
CGTGATAATAACATAACTAC+AGG | - | chr8.1:34126057-34126076 | MS.gene008780:CDS | 30.0% | |
GAAGTTTATGTGTTAGATGA+TGG | - | chr8.1:34125738-34125757 | MS.gene008780:intron | 30.0% | |
GATGTATGTGTCATAGAATT+GGG | - | chr8.1:34126606-34126625 | MS.gene008780:CDS | 30.0% | |
GGAAACAACACATCTAAAAA+TGG | - | chr8.1:34130067-34130086 | MS.gene008780:CDS | 30.0% | |
GGTGAATAGCTTAAACTTTA+TGG | - | chr8.1:34128373-34128392 | MS.gene008780:intron | 30.0% | |
GTCTTGATTTAAATTCAGGA+TGG | + | chr8.1:34129723-34129742 | None:intergenic | 30.0% | |
GTTAATGTCAAAACACAACA+GGG | - | chr8.1:34130283-34130302 | MS.gene008780:intron | 30.0% | |
TAAACTTCTCCATGTTCAAT+AGG | + | chr8.1:34125726-34125745 | None:intergenic | 30.0% | |
TAAATTAATTAGGCAGTACC+TGG | + | chr8.1:34126287-34126306 | None:intergenic | 30.0% | |
TAATGCTTGAATAAAAGGCA+TGG | + | chr8.1:34126764-34126783 | None:intergenic | 30.0% | |
TAATTCCATGAACATGACAA+GGG | + | chr8.1:34126104-34126123 | None:intergenic | 30.0% | |
TAGGGATCAAAAACACATAT+GGG | - | chr8.1:34129139-34129158 | MS.gene008780:intron | 30.0% | |
TATGATTGAAGATATGCCAA+TGG | + | chr8.1:34129958-34129977 | None:intergenic | 30.0% | |
TGAATGCATGTTTGATACTT+TGG | + | chr8.1:34130112-34130131 | None:intergenic | 30.0% | |
TGATGTATGTGTCATAGAAT+TGG | - | chr8.1:34126605-34126624 | MS.gene008780:CDS | 30.0% | |
TGTCCTAATGCTTGAATAAA+AGG | + | chr8.1:34126769-34126788 | None:intergenic | 30.0% | |
TTAGAGTCCATAAGATATGA+AGG | + | chr8.1:34126192-34126211 | None:intergenic | 30.0% | |
TTGTCATGTTCATGGAATTA+TGG | - | chr8.1:34126104-34126123 | MS.gene008780:intron | 30.0% | |
TTTACAGTCTGTCATTGATA+AGG | - | chr8.1:34126230-34126249 | MS.gene008780:CDS | 30.0% | |
! | AACAAATGAACCTTGTTTCA+AGG | - | chr8.1:34125850-34125869 | MS.gene008780:intron | 30.0% |
! | ACAAATGAACCTTGTTTCAA+GGG | - | chr8.1:34125851-34125870 | MS.gene008780:intron | 30.0% |
! | ATGCCTTTTATTCAAGCATT+AGG | - | chr8.1:34126763-34126782 | MS.gene008780:CDS | 30.0% |
! | ATTATTTTCCTCTGGTCTAT+AGG | - | chr8.1:34127980-34127999 | MS.gene008780:intron | 30.0% |
! | CAACATTTAAAACAGGAACA+AGG | + | chr8.1:34127120-34127139 | None:intergenic | 30.0% |
! | CAAGGTTCATTTGTTTGTTA+TGG | + | chr8.1:34125845-34125864 | None:intergenic | 30.0% |
! | CCTCAATTTGTTCTATTTCA+TGG | - | chr8.1:34128066-34128085 | MS.gene008780:intron | 30.0% |
! | GCTTTTTAGACAAAATTACC+TGG | - | chr8.1:34126367-34126386 | MS.gene008780:CDS | 30.0% |
! | GTTGCATTTTTCTTACTAGT+TGG | - | chr8.1:34125643-34125662 | MS.gene008780:intron | 30.0% |
! | GTTTCAATCTGAAGTATATG+TGG | + | chr8.1:34127469-34127488 | None:intergenic | 30.0% |
! | TCACCAACAACATTTAAAAC+AGG | + | chr8.1:34127127-34127146 | None:intergenic | 30.0% |
! | TGAGATGTTAACTTTTGGAT+TGG | - | chr8.1:34130261-34130280 | MS.gene008780:intron | 30.0% |
! | TGTTTGAACTGTTTTGTGTA+GGG | - | chr8.1:34129121-34129140 | MS.gene008780:intron | 30.0% |
! | TTGAACTACATGCATTTTCA+AGG | - | chr8.1:34130046-34130065 | MS.gene008780:CDS | 30.0% |
! | TTGTTTGAACTGTTTTGTGT+AGG | - | chr8.1:34129120-34129139 | MS.gene008780:intron | 30.0% |
! | TTTTATTCCTTGAAAATGGC+AGG | - | chr8.1:34128289-34128308 | MS.gene008780:intron | 30.0% |
!! | CCGTTTTTATAGTTGTTACA+TGG | - | chr8.1:34127046-34127065 | MS.gene008780:intron | 30.0% |
!! | CTAAAACTTAGTTGTTTCTC+AGG | - | chr8.1:34127690-34127709 | MS.gene008780:intron | 30.0% |
!! | GTTCCTGTTTTAAATGTTGT+TGG | - | chr8.1:34127121-34127140 | MS.gene008780:CDS | 30.0% |
!! | TGTTTTCAAGATTGTACCTA+TGG | + | chr8.1:34126637-34126656 | None:intergenic | 30.0% |
!!! | CATTTTTTTCCCTTGAAACA+AGG | + | chr8.1:34125863-34125882 | None:intergenic | 30.0% |
!!! | GACTCTTTATTTTGGTTGAA+AGG | - | chr8.1:34125984-34126003 | MS.gene008780:intron | 30.0% |
!!! | TCTTTATTTTGGTTGAAAGG+TGG | - | chr8.1:34125987-34126006 | MS.gene008780:intron | 30.0% |
!!! | TGACTGGAACTTTTTAGTTT+AGG | - | chr8.1:34127664-34127683 | MS.gene008780:intron | 30.0% |
AAAAGAAACTTACCGTGGAT+TGG | - | chr8.1:34128609-34128628 | MS.gene008780:intron | 35.0% | |
AAAGGAATGTGCCATATGTT+AGG | + | chr8.1:34127885-34127904 | None:intergenic | 35.0% | |
AAAGTTGCGTTATGTTTGCA+GGG | - | chr8.1:34127831-34127850 | MS.gene008780:intron | 35.0% | |
AACTACAGGAAAGATTTACC+AGG | - | chr8.1:34126071-34126090 | MS.gene008780:CDS | 35.0% | |
AACTCAAGAGCCTAATTTAG+AGG | - | chr8.1:34128160-34128179 | MS.gene008780:intron | 35.0% | |
AAGAGCCTAATTTAGAGGAA+TGG | - | chr8.1:34128165-34128184 | MS.gene008780:intron | 35.0% | |
AAGCAACTAACTTAAATCCC+AGG | + | chr8.1:34130187-34130206 | None:intergenic | 35.0% | |
AATATTGAGTCATCAGCACA+AGG | + | chr8.1:34129281-34129300 | None:intergenic | 35.0% | |
ACAATGTCACCTATTGAACA+TGG | - | chr8.1:34125714-34125733 | MS.gene008780:intron | 35.0% | |
ACATGCTTACTTGCATATGT+CGG | - | chr8.1:34128484-34128503 | MS.gene008780:CDS | 35.0% | |
AGCAACTAACTTAAATCCCA+GGG | + | chr8.1:34130186-34130205 | None:intergenic | 35.0% | |
ATACCTAAGAACAAAGGAGA+AGG | + | chr8.1:34129754-34129773 | None:intergenic | 35.0% | |
CAAGTCCATTCCTCTAAATT+AGG | + | chr8.1:34128173-34128192 | None:intergenic | 35.0% | |
CAATCTTGAAAACATTCCTC+AGG | - | chr8.1:34126643-34126662 | MS.gene008780:intron | 35.0% | |
CATATGCAAGTAAGCATGTT+AGG | + | chr8.1:34128483-34128502 | None:intergenic | 35.0% | |
CATGGTATATGTTCATTTGC+AGG | - | chr8.1:34127064-34127083 | MS.gene008780:intron | 35.0% | |
CCATTCAAGATTGGATAGAA+AGG | - | chr8.1:34126544-34126563 | MS.gene008780:intron | 35.0% | |
CCTTTCTATCCAATCTTGAA+TGG | + | chr8.1:34126547-34126566 | None:intergenic | 35.0% | |
CGGTGAGTTTGACAAAATTA+CGG | + | chr8.1:34126399-34126418 | None:intergenic | 35.0% | |
CTATTTAGGAAAAACTGTCC+AGG | - | chr8.1:34126266-34126285 | MS.gene008780:intron | 35.0% | |
GAAAACAGAATTCCATACCT+TGG | - | chr8.1:34128887-34128906 | MS.gene008780:intron | 35.0% | |
GCAGCATGGAAGTTATTAAA+GGG | - | chr8.1:34128785-34128804 | MS.gene008780:intron | 35.0% | |
GGACATTTCTCATATAGAGT+AGG | - | chr8.1:34126784-34126803 | MS.gene008780:CDS | 35.0% | |
GGTTAATGTCAAAACACAAC+AGG | - | chr8.1:34130282-34130301 | MS.gene008780:intron | 35.0% | |
GTAGGGATCAAAAACACATA+TGG | - | chr8.1:34129138-34129157 | MS.gene008780:intron | 35.0% | |
TAAAGTTGCGTTATGTTTGC+AGG | - | chr8.1:34127830-34127849 | MS.gene008780:intron | 35.0% | |
TACCGCAATAAAAAGACTTC+CGG | + | chr8.1:34126887-34126906 | None:intergenic | 35.0% | |
TATGGCAATGGCAATATCAA+TGG | - | chr8.1:34130444-34130463 | MS.gene008780:CDS | 35.0% | |
TATTCACCTTTGTAACTGAG+AGG | + | chr8.1:34128361-34128380 | None:intergenic | 35.0% | |
TATTGGCCAGAACATGTATA+TGG | - | chr8.1:34130426-34130445 | MS.gene008780:CDS | 35.0% | |
TGAATGGCATCAGTAATATG+AGG | + | chr8.1:34126531-34126550 | None:intergenic | 35.0% | |
TGTTTGTATTCACGTGAGTT+TGG | - | chr8.1:34130144-34130163 | MS.gene008780:intron | 35.0% | |
TTACTGATGCCATTCAAGAT+TGG | - | chr8.1:34126535-34126554 | MS.gene008780:intron | 35.0% | |
TTTACTGGAAAGGATGAAAC+TGG | - | chr8.1:34129556-34129575 | MS.gene008780:intron | 35.0% | |
! | AATCCACGGTAAGTTTCTTT+TGG | + | chr8.1:34128610-34128629 | None:intergenic | 35.0% |
! | ACGCATGGACTTTTAGTATT+CGG | + | chr8.1:34128998-34129017 | None:intergenic | 35.0% |
! | ACTAACAGAAGCATGAACTA+AGG | + | chr8.1:34128585-34128604 | None:intergenic | 35.0% |
! | GATTCTAGCTAGACTTCATT+AGG | - | chr8.1:34129851-34129870 | MS.gene008780:intron | 35.0% |
! | GTGCACATTTGTTGATATGT+AGG | + | chr8.1:34127439-34127458 | None:intergenic | 35.0% |
! | GTTTATGTGTTAGATGATGG+TGG | - | chr8.1:34125741-34125760 | MS.gene008780:intron | 35.0% |
! | TTTTGCAGATTTGCATTCCT+TGG | + | chr8.1:34129206-34129225 | None:intergenic | 35.0% |
! | TTTTTCTTTGCTGCAAAAGG+TGG | + | chr8.1:34125449-34125468 | None:intergenic | 35.0% |
!! | AAGTTATTAAAGGGTGCTGA+TGG | - | chr8.1:34128794-34128813 | MS.gene008780:intron | 35.0% |
!! | ATTGGATTTTGATCACTCAC+TGG | + | chr8.1:34128227-34128246 | None:intergenic | 35.0% |
!! | GCTGGTCTTGATTTAAATTC+AGG | + | chr8.1:34129727-34129746 | None:intergenic | 35.0% |
!! | GTTACTAGCCTTGAAAATTC+CGG | - | chr8.1:34129526-34129545 | MS.gene008780:intron | 35.0% |
!! | TTAAAGTGCTGAACCTTCAA+GGG | - | chr8.1:34128027-34128046 | MS.gene008780:CDS | 35.0% |
!! | TTATAGTTCAGCAGTTTTGG+AGG | + | chr8.1:34127927-34127946 | None:intergenic | 35.0% |
!! | TTTAAAGTGCTGAACCTTCA+AGG | - | chr8.1:34128026-34128045 | MS.gene008780:CDS | 35.0% |
!!! | CTCTTATTTTTCTGAAAGGC+TGG | - | chr8.1:34128116-34128135 | MS.gene008780:intron | 35.0% |
!!! | TATAGTTCAGCAGTTTTGGA+GGG | + | chr8.1:34127926-34127945 | None:intergenic | 35.0% |
AAGTATGTTCTTGTAACCGG+TGG | - | chr8.1:34125297-34125316 | MS.gene008780:CDS | 40.0% | |
AAGTTGCGTTATGTTTGCAG+GGG | - | chr8.1:34127832-34127851 | MS.gene008780:intron | 40.0% | |
AATTCCGGTCTTTCGTTTAC+TGG | - | chr8.1:34129541-34129560 | MS.gene008780:intron | 40.0% | |
AGACCTTCTCCTTTGTTCTT+AGG | - | chr8.1:34129748-34129767 | MS.gene008780:CDS | 40.0% | |
AGTAAGCATGTTAGGGAGTT+AGG | + | chr8.1:34128475-34128494 | None:intergenic | 40.0% | |
AGTTTCCCTTGTCATGTTCA+TGG | - | chr8.1:34126096-34126115 | MS.gene008780:intron | 40.0% | |
ATACCAGTGGATGGAAAAGA+AGG | - | chr8.1:34126576-34126595 | MS.gene008780:CDS | 40.0% | |
ATAGAATTGGGTGGAACCAT+AGG | - | chr8.1:34126618-34126637 | MS.gene008780:CDS | 40.0% | |
ATGCTGCCTTATAAGCATCA+GGG | + | chr8.1:34128772-34128791 | None:intergenic | 40.0% | |
CAAATGTGCCAGTGTTGTAA+CGG | + | chr8.1:34127504-34127523 | None:intergenic | 40.0% | |
CAACACATCTAAAAATGGGG+TGG | - | chr8.1:34130072-34130091 | MS.gene008780:CDS | 40.0% | |
CAAGCACATGTACTTCATGA+AGG | + | chr8.1:34128513-34128532 | None:intergenic | 40.0% | |
CAAGGCTAGTAACCAAATCA+GGG | + | chr8.1:34129519-34129538 | None:intergenic | 40.0% | |
CCAGAACATGTATATGGCAA+TGG | - | chr8.1:34130432-34130451 | MS.gene008780:CDS | 40.0% | |
CCATTGCCATATACATGTTC+TGG | + | chr8.1:34130435-34130454 | None:intergenic | 40.0% | |
CTTTCCAGTAAACGAAAGAC+CGG | + | chr8.1:34129548-34129567 | None:intergenic | 40.0% | |
GAGAGAAGAGGAGACTATTT+AGG | - | chr8.1:34126252-34126271 | MS.gene008780:intron | 40.0% | |
GCAATCATACTACTCTTGAC+TGG | - | chr8.1:34127648-34127667 | MS.gene008780:intron | 40.0% | |
GCACGAGTTTGGTAAAATCA+CGG | - | chr8.1:34126323-34126342 | MS.gene008780:intron | 40.0% | |
GCAGTCAAAACATGTCAGAA+TGG | - | chr8.1:34130381-34130400 | MS.gene008780:CDS | 40.0% | |
GCTTCATTGATGAGAGACAT+CGG | - | chr8.1:34129397-34129416 | MS.gene008780:intron | 40.0% | |
GGAGTTACTGCTAGTAGTAT+TGG | - | chr8.1:34125342-34125361 | MS.gene008780:CDS | 40.0% | |
GGATCAAAAACACATATGGG+TGG | - | chr8.1:34129142-34129161 | MS.gene008780:CDS | 40.0% | |
GGCAGCATGGAAGTTATTAA+AGG | - | chr8.1:34128784-34128803 | MS.gene008780:intron | 40.0% | |
GTATGTGTCATAGAATTGGG+TGG | - | chr8.1:34126609-34126628 | MS.gene008780:CDS | 40.0% | |
GTCACAGGTGGGAAAAAAAA+GGG | + | chr8.1:34126131-34126150 | None:intergenic | 40.0% | |
GTCATTGATAAGGAGAGAAG+AGG | - | chr8.1:34126240-34126259 | MS.gene008780:CDS | 40.0% | |
TAAACCAATGTACACACCTC+AGG | + | chr8.1:34129031-34129050 | None:intergenic | 40.0% | |
TAGACCCTGTCTCTTAGATA+TGG | - | chr8.1:34129366-34129385 | MS.gene008780:intron | 40.0% | |
TCAAGATTGGATAGAAAGGG+TGG | - | chr8.1:34126548-34126567 | MS.gene008780:intron | 40.0% | |
TCAAGGCTAGTAACCAAATC+AGG | + | chr8.1:34129520-34129539 | None:intergenic | 40.0% | |
TCTATGACACATACATCAGC+TGG | + | chr8.1:34126603-34126622 | None:intergenic | 40.0% | |
TGATCTTGAGAATCTGTCAC+AGG | + | chr8.1:34126146-34126165 | None:intergenic | 40.0% | |
TGGAAACTATGAGCGCTTTA+TGG | - | chr8.1:34126020-34126039 | MS.gene008780:CDS | 40.0% | |
TGTCACAGGTGGGAAAAAAA+AGG | + | chr8.1:34126132-34126151 | None:intergenic | 40.0% | |
TTAGTGAGACTAACCCTTGA+AGG | + | chr8.1:34128043-34128062 | None:intergenic | 40.0% | |
TTCCTACCTCTCAGTTACAA+AGG | - | chr8.1:34128352-34128371 | MS.gene008780:intron | 40.0% | |
TTGCCAAAAGAAACTTACCG+TGG | - | chr8.1:34128604-34128623 | MS.gene008780:intron | 40.0% | |
! | ACGAAAGACCGGAATTTTCA+AGG | + | chr8.1:34129537-34129556 | None:intergenic | 40.0% |
! | AGGTGCTAACAACTTTTGCT+TGG | - | chr8.1:34127084-34127103 | MS.gene008780:intron | 40.0% |
! | CACCGGAAGTCTTTTTATTG+CGG | - | chr8.1:34126882-34126901 | MS.gene008780:CDS | 40.0% |
! | TTCTCAATTTTGCCTGCTTC+CGG | - | chr8.1:34127741-34127760 | MS.gene008780:CDS | 40.0% |
! | TTTTCCATCCACTGGTATGT+GGG | + | chr8.1:34126574-34126593 | None:intergenic | 40.0% |
!! | CTTAGTTGTTTCTCAGGTAC+TGG | - | chr8.1:34127696-34127715 | MS.gene008780:intron | 40.0% |
!! | GTTGTTAGTGGACTTGGTAA+AGG | - | chr8.1:34125321-34125340 | MS.gene008780:CDS | 40.0% |
!!! | ATACGAACCTGCCATTTTCA+AGG | + | chr8.1:34128299-34128318 | None:intergenic | 40.0% |
!!! | TCTGACATGTTTTGACTGCT+GGG | + | chr8.1:34130380-34130399 | None:intergenic | 40.0% |
!!! | TGTGGCTGCAATTTTAGTTG+TGG | - | chr8.1:34126969-34126988 | MS.gene008780:CDS | 40.0% |
!!! | TTCTGACATGTTTTGACTGC+TGG | + | chr8.1:34130381-34130400 | None:intergenic | 40.0% |
AAGTCCACTAACAACTCCAC+CGG | + | chr8.1:34125316-34125335 | None:intergenic | 45.0% | |
ACAAAATTACGGTGTGTGCC+AGG | + | chr8.1:34126388-34126407 | None:intergenic | 45.0% | |
ACATTCCTCAGGCTTCTTCA+TGG | - | chr8.1:34126654-34126673 | MS.gene008780:intron | 45.0% | |
AGAGAGTAACCATTGTGCTG+CGG | + | chr8.1:34127317-34127336 | None:intergenic | 45.0% | |
AGATTTGTGGAGTCAGTCCT+TGG | + | chr8.1:34127287-34127306 | None:intergenic | 45.0% | |
AGGTTCGTATAGCGATAGTC+GGG | - | chr8.1:34128309-34128328 | MS.gene008780:intron | 45.0% | |
AGTTGCGTTATGTTTGCAGG+GGG | - | chr8.1:34127833-34127852 | MS.gene008780:intron | 45.0% | |
ATGCGTCATATTCATGCCTG+AGG | - | chr8.1:34129012-34129031 | MS.gene008780:intron | 45.0% | |
CACCTTTGTAACTGAGAGGT+AGG | + | chr8.1:34128357-34128376 | None:intergenic | 45.0% | |
CAGATTTGCATTCCTTGGTC+TGG | + | chr8.1:34129201-34129220 | None:intergenic | 45.0% | |
CAGGTTCGTATAGCGATAGT+CGG | - | chr8.1:34128308-34128327 | MS.gene008780:intron | 45.0% | |
CATGCTGCCTTATAAGCATC+AGG | + | chr8.1:34128773-34128792 | None:intergenic | 45.0% | |
CCAAGACAAATGCCAAGGTA+TGG | + | chr8.1:34128902-34128921 | None:intergenic | 45.0% | |
CCAGCATCTGTGTTCAAGTA+AGG | + | chr8.1:34125693-34125712 | None:intergenic | 45.0% | |
CCATACCTTGGCATTTGTCT+TGG | - | chr8.1:34128899-34128918 | MS.gene008780:intron | 45.0% | |
CCTTACTTGAACACAGATGC+TGG | - | chr8.1:34125690-34125709 | MS.gene008780:intron | 45.0% | |
CGAAGATGCAACTGCAAAAG+AGG | - | chr8.1:34128649-34128668 | MS.gene008780:CDS | 45.0% | |
CGGTCTTTCGTTTACTGGAA+AGG | - | chr8.1:34129546-34129565 | MS.gene008780:intron | 45.0% | |
CTCTGGTCTATAGGATCAGA+AGG | - | chr8.1:34127989-34128008 | MS.gene008780:intron | 45.0% | |
CTGATGCTTATAAGGCAGCA+TGG | - | chr8.1:34128771-34128790 | MS.gene008780:intron | 45.0% | |
CTTCTGATCCTATAGACCAG+AGG | + | chr8.1:34127991-34128010 | None:intergenic | 45.0% | |
CTTGAGAATCTGTCACAGGT+GGG | + | chr8.1:34126142-34126161 | None:intergenic | 45.0% | |
GAGACATCGGCATAGATATG+AGG | - | chr8.1:34129410-34129429 | MS.gene008780:intron | 45.0% | |
GAGGACATATTTCCAGACCA+AGG | - | chr8.1:34129186-34129205 | MS.gene008780:CDS | 45.0% | |
GCAGAACCCTGATGCTTATA+AGG | - | chr8.1:34128763-34128782 | MS.gene008780:intron | 45.0% | |
GCAGCCATATCTAAGAGACA+GGG | + | chr8.1:34129373-34129392 | None:intergenic | 45.0% | |
GCATTCCAAGACAAATGCCA+AGG | + | chr8.1:34128907-34128926 | None:intergenic | 45.0% | |
GCTCATAGTTTCCAAGATCC+AGG | + | chr8.1:34126014-34126033 | None:intergenic | 45.0% | |
GGTAGCTGAAATCCAATCCA+CGG | + | chr8.1:34128624-34128643 | None:intergenic | 45.0% | |
GTCTTACGACACTCTTCAAG+AGG | - | chr8.1:34130339-34130358 | MS.gene008780:intron | 45.0% | |
TACGAAAACATACCGGAAGC+AGG | + | chr8.1:34127756-34127775 | None:intergenic | 45.0% | |
TATGCAGGTGAACCCTGATT+TGG | - | chr8.1:34129504-34129523 | MS.gene008780:CDS | 45.0% | |
TCAGGCATGAATATGACGCA+TGG | + | chr8.1:34129013-34129032 | None:intergenic | 45.0% | |
TCTAACCATGAAGAAGCCTG+AGG | + | chr8.1:34126662-34126681 | None:intergenic | 45.0% | |
TCTTGAGAATCTGTCACAGG+TGG | + | chr8.1:34126143-34126162 | None:intergenic | 45.0% | |
TGCAGCCATATCTAAGAGAC+AGG | + | chr8.1:34129374-34129393 | None:intergenic | 45.0% | |
TGTTCTGGCCAATAAGCATG+TGG | + | chr8.1:34130420-34130439 | None:intergenic | 45.0% | |
TGTTTAGATCGGCACGAGTT+TGG | - | chr8.1:34126312-34126331 | MS.gene008780:intron | 45.0% | |
! | AGGACTGACTCCACAAATCT+TGG | - | chr8.1:34127287-34127306 | MS.gene008780:intron | 45.0% |
! | CGTGTCACTGCCATCAAAAT+TGG | - | chr8.1:34125390-34125409 | MS.gene008780:CDS | 45.0% |
! | CTTTTCCATCCACTGGTATG+TGG | + | chr8.1:34126575-34126594 | None:intergenic | 45.0% |
! | CTTTTGCAGTTGCATCTTCG+AGG | + | chr8.1:34128649-34128668 | None:intergenic | 45.0% |
! | GGTACTGGATGAGAATGCAA+AGG | - | chr8.1:34127711-34127730 | MS.gene008780:intron | 45.0% |
! | GGTTTGCTTCTCAAAGCTTG+TGG | - | chr8.1:34125363-34125382 | MS.gene008780:CDS | 45.0% |
! | TGCTGATGGTGTTCTTGTTC+CGG | - | chr8.1:34128808-34128827 | MS.gene008780:intron | 45.0% |
! | TTTGGTGATAGAGGAGTGCA+AGG | - | chr8.1:34128836-34128855 | MS.gene008780:intron | 45.0% |
!! | TGTGTTAGATGATGGTGGTG+AGG | - | chr8.1:34125746-34125765 | MS.gene008780:intron | 45.0% |
!! | TTTTGGTTGAAAGGTGGACC+TGG | - | chr8.1:34125993-34126012 | MS.gene008780:intron | 45.0% |
!! | AAAAAAAAAAAACTATAAAA+AGG | + | chr8.1:34127018-34127037 | None:intergenic | 5.0% |
!! | TTTAAACAAAAATAAATAAT+GGG | + | chr8.1:34125567-34125586 | None:intergenic | 5.0% |
!!! | GTTATTTTATTATTTATTTT+TGG | + | chr8.1:34125823-34125842 | None:intergenic | 5.0% |
!!! | TTTTATAGTTTTTTTTTTTT+TGG | - | chr8.1:34127018-34127037 | MS.gene008780:intron | 5.0% |
AACAAAGGAGAAGGTCTCGC+TGG | + | chr8.1:34129745-34129764 | None:intergenic | 50.0% | |
AACCGCAACATCGTTTGCAC+CGG | - | chr8.1:34126865-34126884 | MS.gene008780:CDS | 50.0% | |
CATGACAAGGGAAACTTGCC+TGG | + | chr8.1:34126092-34126111 | None:intergenic | 50.0% | |
CATGCCTGAGGTGTGTACAT+TGG | - | chr8.1:34129024-34129043 | MS.gene008780:intron | 50.0% | |
CCAACACAGCATAGTGTGAG+AGG | - | chr8.1:34127252-34127271 | MS.gene008780:intron | 50.0% | |
CCTCTCACACTATGCTGTGT+TGG | + | chr8.1:34127255-34127274 | None:intergenic | 50.0% | |
CGACACTCTTCAAGAGGAGT+AGG | - | chr8.1:34130345-34130364 | MS.gene008780:intron | 50.0% | |
GAGTTTGCACGATCTGTGCT+TGG | - | chr8.1:34128941-34128960 | MS.gene008780:intron | 50.0% | |
GGATGAAACTGGTCAACGCA+TGG | - | chr8.1:34129567-34129586 | MS.gene008780:intron | 50.0% | |
GGGTTTATTGCAGCAGCATG+TGG | - | chr8.1:34130303-34130322 | MS.gene008780:intron | 50.0% | |
GTAACCGGTGGAGTTGTTAG+TGG | - | chr8.1:34125309-34125328 | MS.gene008780:CDS | 50.0% | |
GTACCATGCGTCTTGGATCA+AGG | - | chr8.1:34129164-34129183 | MS.gene008780:CDS | 50.0% | |
GTGAGAGGACTTAGAAGCCA+AGG | - | chr8.1:34127267-34127286 | MS.gene008780:intron | 50.0% | |
TCGTGTGTCCGTTACAACAC+TGG | - | chr8.1:34127493-34127512 | MS.gene008780:intron | 50.0% | |
TGAAACTGGTCAACGCATGG+AGG | - | chr8.1:34129570-34129589 | MS.gene008780:intron | 50.0% | |
TGAAAGGTGGACCTGGATCT+TGG | - | chr8.1:34126000-34126019 | MS.gene008780:intron | 50.0% | |
TGCAAACGATGTTGCGGTTG+CGG | + | chr8.1:34126864-34126883 | None:intergenic | 50.0% | |
TGCAGTTGCATCTTCGAGGT+TGG | + | chr8.1:34128645-34128664 | None:intergenic | 50.0% | |
TTCCGGTGCAAACGATGTTG+CGG | + | chr8.1:34126870-34126889 | None:intergenic | 50.0% | |
! | GCTGATGGTGTTCTTGTTCC+GGG | - | chr8.1:34128809-34128828 | MS.gene008780:intron | 50.0% |
! | GGACCTTCTTTTCCATCCAC+TGG | + | chr8.1:34126582-34126601 | None:intergenic | 50.0% |
!! | GGTGGAGTTGTTAGTGGACT+TGG | - | chr8.1:34125315-34125334 | MS.gene008780:CDS | 50.0% |
ATGGGTGGTACCATGCGTCT+TGG | - | chr8.1:34129157-34129176 | MS.gene008780:CDS | 55.0% | |
CAGAATCACTGCGAGTCCCT+GGG | - | chr8.1:34130167-34130186 | MS.gene008780:intron | 55.0% | |
CCATGCGTCTTGGATCAAGG+AGG | - | chr8.1:34129167-34129186 | MS.gene008780:CDS | 55.0% | |
CCTCCTTGATCCAAGACGCA+TGG | + | chr8.1:34129170-34129189 | None:intergenic | 55.0% | |
CCTCTATCACCAAAGCCTCC+CGG | + | chr8.1:34128830-34128849 | None:intergenic | 55.0% | |
CTGCGGCAAGCCAAGATTTG+TGG | + | chr8.1:34127300-34127319 | None:intergenic | 55.0% | |
GATGGTGTTCTTGTTCCGGG+AGG | - | chr8.1:34128812-34128831 | MS.gene008780:intron | 55.0% | |
GTTCTTGTTCCGGGAGGCTT+TGG | - | chr8.1:34128818-34128837 | MS.gene008780:intron | 55.0% | |
AAGGGTGGCCCACATACCAG+TGG | - | chr8.1:34126563-34126582 | MS.gene008780:CDS | 60.0% | |
GCAGAATCACTGCGAGTCCC+TGG | - | chr8.1:34130166-34130185 | MS.gene008780:intron | 60.0% | |
GTGGCCCACATACCAGTGGA+TGG | - | chr8.1:34126567-34126586 | MS.gene008780:CDS | 60.0% | |
! | CCGGGAGGCTTTGGTGATAG+AGG | - | chr8.1:34128827-34128846 | MS.gene008780:intron | 60.0% |
!! | CTTGGCTTGCCGCAGCACAA+TGG | - | chr8.1:34127305-34127324 | MS.gene008780:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 34125294 | 34130485 | 34125294 | ID=MS.gene008780 |
chr8.1 | mRNA | 34125294 | 34130485 | 34125294 | ID=MS.gene008780.t1;Parent=MS.gene008780 |
chr8.1 | exon | 34130368 | 34130485 | 34130368 | ID=MS.gene008780.t1.exon1;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34130368 | 34130485 | 34130368 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34130012 | 34130091 | 34130012 | ID=MS.gene008780.t1.exon2;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34130012 | 34130091 | 34130012 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34129687 | 34129773 | 34129687 | ID=MS.gene008780.t1.exon3;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34129687 | 34129773 | 34129687 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34129492 | 34129542 | 34129492 | ID=MS.gene008780.t1.exon4;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34129492 | 34129542 | 34129492 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34129140 | 34129257 | 34129140 | ID=MS.gene008780.t1.exon5;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34129140 | 34129257 | 34129140 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34128974 | 34129030 | 34128974 | ID=MS.gene008780.t1.exon6;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34128974 | 34129030 | 34128974 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34128629 | 34128693 | 34128629 | ID=MS.gene008780.t1.exon7;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34128629 | 34128693 | 34128629 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34128453 | 34128536 | 34128453 | ID=MS.gene008780.t1.exon8;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34128453 | 34128536 | 34128453 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34128017 | 34128067 | 34128017 | ID=MS.gene008780.t1.exon9;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34128017 | 34128067 | 34128017 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34127865 | 34127927 | 34127865 | ID=MS.gene008780.t1.exon10;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34127865 | 34127927 | 34127865 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34127731 | 34127777 | 34127731 | ID=MS.gene008780.t1.exon11;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34127731 | 34127777 | 34127731 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34127553 | 34127622 | 34127553 | ID=MS.gene008780.t1.exon12;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34127553 | 34127622 | 34127553 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34127406 | 34127468 | 34127406 | ID=MS.gene008780.t1.exon13;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34127406 | 34127468 | 34127406 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34127109 | 34127198 | 34127109 | ID=MS.gene008780.t1.exon14;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34127109 | 34127198 | 34127109 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34126746 | 34127012 | 34126746 | ID=MS.gene008780.t1.exon15;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34126746 | 34127012 | 34126746 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34126552 | 34126637 | 34126552 | ID=MS.gene008780.t1.exon16;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34126552 | 34126637 | 34126552 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34126348 | 34126396 | 34126348 | ID=MS.gene008780.t1.exon17;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34126348 | 34126396 | 34126348 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34126188 | 34126268 | 34126188 | ID=MS.gene008780.t1.exon18;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34126188 | 34126268 | 34126188 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34126010 | 34126103 | 34126010 | ID=MS.gene008780.t1.exon19;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34126010 | 34126103 | 34126010 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
chr8.1 | exon | 34125294 | 34125475 | 34125294 | ID=MS.gene008780.t1.exon20;Parent=MS.gene008780.t1 |
chr8.1 | CDS | 34125294 | 34125475 | 34125294 | ID=cds.MS.gene008780.t1;Parent=MS.gene008780.t1 |
Gene Sequence |
Protein sequence |