Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90797.t1 | XP_003592792.2 | 95.7 | 417 | 6 | 2 | 1 | 415 | 1 | 407 | 3.10E-217 | 764.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90797.t1 | O64886 | 67.2 | 360 | 104 | 4 | 55 | 412 | 81 | 428 | 1.7e-131 | 470.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90797.t1 | A0A396K4D2 | 95.7 | 417 | 6 | 2 | 1 | 415 | 1 | 407 | 2.2e-217 | 764.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054291 | MS.gene90797 | 0.848632 | 5.42E-60 | -1.69E-46 |
| MS.gene054775 | MS.gene90797 | -0.803188 | 3.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90797.t1 | MTR_1g116110 | 95.631 | 412 | 6 | 2 | 6 | 415 | 1 | 402 | 0.0 | 796 |
| MS.gene90797.t1 | MTR_1g116110 | 99.038 | 312 | 3 | 0 | 104 | 415 | 1 | 312 | 0.0 | 640 |
| MS.gene90797.t1 | MTR_1g116110 | 98.936 | 282 | 3 | 0 | 134 | 415 | 1 | 282 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90797.t1 | AT2G44520 | 67.222 | 360 | 104 | 4 | 55 | 412 | 81 | 428 | 4.57e-173 | 491 |
Find 126 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCGGCTGCTTTGTATTTC+TGG | 0.083161 | 1.4:-88114054 | MS.gene90797:CDS |
| CGGTGCTATTCCACCACTTT+TGG | 0.152134 | 1.4:-88116692 | MS.gene90797:CDS |
| CTTGCCTGCCTTTGATCTTT+TGG | 0.182188 | 1.4:+88112692 | None:intergenic |
| TTGCTGGTGGTTGCAACATC+TGG | 0.235101 | 1.4:-88117868 | MS.gene90797:CDS |
| TCTAATCCCTTTGGGTTTCT+TGG | 0.239936 | 1.4:-88113523 | MS.gene90797:CDS |
| TTCAGATGGGCTGCAGCTTC+TGG | 0.254382 | 1.4:-88114103 | MS.gene90797:intron |
| CTGGGCATCCTCTGTTGGTT+TGG | 0.287378 | 1.4:-88116988 | MS.gene90797:CDS |
| TTGACTCGTTCTCCTCATTA+TGG | 0.287688 | 1.4:+88117055 | None:intergenic |
| TACTCTCTTGCTGATCCATC+TGG | 0.304688 | 1.4:-88113585 | MS.gene90797:CDS |
| CTCTATATATCTAATCCCTT+TGG | 0.314375 | 1.4:-88113532 | MS.gene90797:CDS |
| AAAACTAAATTATAGTTTGC+TGG | 0.324778 | 1.4:-88117884 | MS.gene90797:intron |
| CCACCATGTTTAAGAGGAAT+TGG | 0.325402 | 1.4:-88118249 | MS.gene90797:CDS |
| TCTATATATCTAATCCCTTT+GGG | 0.339285 | 1.4:-88113531 | MS.gene90797:CDS |
| CATGCTTTCCTATACTTGCT+TGG | 0.339997 | 1.4:-88117803 | MS.gene90797:CDS |
| ACTAAATAGTTTGATTCTTC+CGG | 0.355070 | 1.4:-88114071 | MS.gene90797:CDS |
| ACTGGATTTGTGTTGGGGAG+TGG | 0.363487 | 1.4:-88117844 | MS.gene90797:CDS |
| GCATCCTCTGTTGGTTTGGC+TGG | 0.366724 | 1.4:-88116984 | MS.gene90797:CDS |
| TCACTACCTGCGTTGCTAGT+AGG | 0.367115 | 1.4:+88116955 | None:intergenic |
| ATCTCCCTCGCTCGTCACTA+TGG | 0.371552 | 1.4:-88118076 | MS.gene90797:CDS |
| AGGAGGAGAGAGATGAAGAT+TGG | 0.373127 | 1.4:+88118126 | None:intergenic |
| ATGCTTTCCTATACTTGCTT+GGG | 0.376660 | 1.4:-88117802 | MS.gene90797:CDS |
| ATCTGCCAGCACTTTAAATC+AGG | 0.389440 | 1.4:-88117761 | MS.gene90797:intron |
| GGTTCACCTGAGACGAGCTT+TGG | 0.397137 | 1.4:+88118033 | None:intergenic |
| AATTGACGAGTCTGGAATAC+AGG | 0.401617 | 1.4:+88118215 | None:intergenic |
| AACCCCAAAATTGCGATGAT+TGG | 0.401857 | 1.4:-88118274 | None:intergenic |
| TCTGGGACTGGATTTGTGTT+GGG | 0.408286 | 1.4:-88117850 | MS.gene90797:CDS |
| GATGAGATCGGTGGACTTAG+AGG | 0.410832 | 1.4:+88118096 | None:intergenic |
| TGCTGGTGGTTGCAACATCT+GGG | 0.425974 | 1.4:-88117867 | MS.gene90797:CDS |
| CAGTACCTCATGCAGTTGGC+TGG | 0.427514 | 1.4:-88117007 | MS.gene90797:CDS |
| CACTACCTGCGTTGCTAGTA+GGG | 0.429355 | 1.4:+88116956 | None:intergenic |
| AACTCTCCAAAGCTCGTCTC+AGG | 0.438797 | 1.4:-88118039 | MS.gene90797:intron |
| CGAAGAGGAATTGACGAGTC+TGG | 0.444141 | 1.4:+88118207 | None:intergenic |
| GTGGACTTAGAGGCGGAAAC+AGG | 0.444880 | 1.4:+88118106 | None:intergenic |
| CATGGTACCCAAGCAAGTAT+AGG | 0.445696 | 1.4:+88117795 | None:intergenic |
| TGGGCTTGCTGCTTCCAACC+TGG | 0.449902 | 1.4:-88116785 | MS.gene90797:CDS |
| ATCTGGGACTGGATTTGTGT+TGG | 0.470508 | 1.4:-88117851 | MS.gene90797:CDS |
| TTGGCACCACCATGTTTAAG+AGG | 0.472232 | 1.4:-88118255 | MS.gene90797:CDS |
| GAGACGAGCTTTGGAGAGTT+CGG | 0.473314 | 1.4:+88118042 | None:intergenic |
| GTTGGCTGGGCATCCTCTGT+TGG | 0.479779 | 1.4:-88116993 | MS.gene90797:CDS |
| AGATTCATCCCGTAAATACA+TGG | 0.482928 | 1.4:-88116729 | MS.gene90797:CDS |
| CAGACTAATATGTTAGCTGC+TGG | 0.486361 | 1.4:-88116805 | MS.gene90797:CDS |
| AGAGAGATGAAGATTGGAAG+AGG | 0.487459 | 1.4:+88118132 | None:intergenic |
| CGTTGACTTCTAAGAAGTGT+TGG | 0.489983 | 1.4:+88112779 | None:intergenic |
| TGAAGAAGAAGAAGAGAAGG+TGG | 0.492582 | 1.4:+88118156 | None:intergenic |
| CTGGGACTGGATTTGTGTTG+GGG | 0.498026 | 1.4:-88117849 | MS.gene90797:CDS |
| TACTTGCTTGGGTACCATGA+TGG | 0.499620 | 1.4:-88117791 | MS.gene90797:CDS |
| GTGGTTGCAACATCTGGGAC+TGG | 0.501533 | 1.4:-88117862 | MS.gene90797:CDS |
| GAGAGATGAAGATTGGAAGA+GGG | 0.506932 | 1.4:+88118133 | None:intergenic |
| CAAAAGATCAAAGGCAGGCA+AGG | 0.508343 | 1.4:-88112691 | MS.gene90797:CDS |
| TCTGAAGTTTCCACAGAGGA+TGG | 0.508508 | 1.4:+88112736 | None:intergenic |
| GGGTGAAGAAGAAGAAGAGA+AGG | 0.509150 | 1.4:+88118153 | None:intergenic |
| TGAAGTTTCCACAGAGGATG+GGG | 0.513270 | 1.4:+88112738 | None:intergenic |
| ATCCCGTAAATACATGGGTG+GGG | 0.515022 | 1.4:-88116723 | MS.gene90797:CDS |
| GGATTTGTGTTGGGGAGTGG+TGG | 0.515506 | 1.4:-88117841 | MS.gene90797:CDS |
| AGTAACCTGATTTAAAGTGC+TGG | 0.526743 | 1.4:+88117756 | None:intergenic |
| CTGAAGTTTCCACAGAGGAT+GGG | 0.528347 | 1.4:+88112737 | None:intergenic |
| GAAGTTGTGAAGAGACGAAG+AGG | 0.532052 | 1.4:+88118192 | None:intergenic |
| TGGGCGGAAAACAGCATTGG+TGG | 0.535298 | 1.4:-88113565 | MS.gene90797:CDS |
| AGACTAATATGTTAGCTGCT+GGG | 0.538050 | 1.4:-88116804 | MS.gene90797:CDS |
| TCCGAGCTCTTTCCTTAGTG+CGG | 0.538953 | 1.4:+88112875 | None:intergenic |
| CATCCCGTAAATACATGGGT+GGG | 0.539017 | 1.4:-88116724 | MS.gene90797:CDS |
| TGCCAGAAATACAAAGCAGC+CGG | 0.540109 | 1.4:+88114052 | None:intergenic |
| CACAATTACCCCAAAAGTGG+TGG | 0.543366 | 1.4:+88116682 | None:intergenic |
| GTACACAATTACCCCAAAAG+TGG | 0.545961 | 1.4:+88116679 | None:intergenic |
| AAACAGCATTGGTGGCTATG+AGG | 0.548674 | 1.4:-88113557 | MS.gene90797:CDS |
| ACTCTCTTGCTGATCCATCT+GGG | 0.554804 | 1.4:-88113584 | MS.gene90797:CDS |
| TATTACACAATGTCGTATGA+AGG | 0.554978 | 1.4:+88112607 | None:intergenic |
| GCAATGGAAGCATATGCTAC+AGG | 0.556784 | 1.4:+88112652 | None:intergenic |
| ATCTGGGCGGAAAACAGCAT+TGG | 0.557115 | 1.4:-88113568 | MS.gene90797:CDS |
| TCAGAGATGTATGACAAGAA+TGG | 0.558162 | 1.4:-88112718 | MS.gene90797:CDS |
| AGTCAAAGGCCACTGCCCTC+AGG | 0.558809 | 1.4:-88117038 | MS.gene90797:CDS |
| TCCCGTAAATACATGGGTGG+GGG | 0.566400 | 1.4:-88116722 | MS.gene90797:CDS |
| AGTACCTCATGCAGTTGGCT+GGG | 0.566631 | 1.4:-88117006 | MS.gene90797:CDS |
| AACGGGGAGATAAAGAAGAC+TGG | 0.572845 | 1.4:+88112840 | None:intergenic |
| TTCTTAGAAGTCAACGCAGA+GGG | 0.574626 | 1.4:-88112772 | MS.gene90797:CDS |
| AATGGTAACCAAAAGATCAA+AGG | 0.578992 | 1.4:-88112700 | MS.gene90797:CDS |
| GGCAGATGCAGCAACCATCA+TGG | 0.579018 | 1.4:+88117777 | None:intergenic |
| CGTGAGGACTATGCTGCGGG+AGG | 0.580386 | 1.4:-88113995 | MS.gene90797:CDS |
| AAAAGATCAAAGGCAGGCAA+GGG | 0.583612 | 1.4:-88112690 | MS.gene90797:CDS |
| CAAGCAAGTATAGGAAAGCA+TGG | 0.584361 | 1.4:+88117804 | None:intergenic |
| ACCGCACTAAGGAAAGAGCT+CGG | 0.586450 | 1.4:-88112876 | MS.gene90797:CDS |
| ACGGGATGAATCTGCTTCAA+CGG | 0.587749 | 1.4:+88116739 | None:intergenic |
| TCAAGAATGATGCCATAATG+AGG | 0.587815 | 1.4:-88117067 | MS.gene90797:CDS |
| TAATGAGGAGAACGAGTCAA+AGG | 0.594303 | 1.4:-88117052 | MS.gene90797:CDS |
| TATTGCAAGTGTAAGTGCAG+TGG | 0.601469 | 1.4:+88112927 | None:intergenic |
| TGTCGTGAGGACTATGCTGC+GGG | 0.601768 | 1.4:-88113998 | MS.gene90797:CDS |
| ACTAAATTATAGTTTGCTGG+TGG | 0.602277 | 1.4:-88117881 | MS.gene90797:intron |
| GTTATGCGTCCTGAGGGCAG+TGG | 0.605804 | 1.4:+88117029 | None:intergenic |
| CATATGCCAAGAAACCCAAA+GGG | 0.606346 | 1.4:+88113517 | None:intergenic |
| AGGTACTGTTATGCGTCCTG+AGG | 0.608440 | 1.4:+88117022 | None:intergenic |
| AAATGAATACAGAACCAGGT+TGG | 0.610247 | 1.4:+88116771 | None:intergenic |
| GACTTAGAGGCGGAAACAGG+AGG | 0.611061 | 1.4:+88118109 | None:intergenic |
| GTTTCCATAGTGACGAGCGA+GGG | 0.612164 | 1.4:+88118072 | None:intergenic |
| TCATCCCGTAAATACATGGG+TGG | 0.614519 | 1.4:-88116725 | MS.gene90797:CDS |
| GTGAGGACTATGCTGCGGGA+GGG | 0.614597 | 1.4:-88113994 | MS.gene90797:intron |
| TCATATGCCAAGAAACCCAA+AGG | 0.617515 | 1.4:+88113516 | None:intergenic |
| CCAATTCCTCTTAAACATGG+TGG | 0.621027 | 1.4:+88118249 | None:intergenic |
| ACAATGTCGTATGAAGGAGC+AGG | 0.622299 | 1.4:+88112613 | None:intergenic |
| TAAGCAAGGGCCATAAAATG+TGG | 0.623266 | 1.4:+88114025 | None:intergenic |
| ACGAGCGAGGGAGATGAGAT+CGG | 0.623642 | 1.4:+88118084 | None:intergenic |
| GTAACCAAAAGATCAAAGGC+AGG | 0.624561 | 1.4:-88112696 | MS.gene90797:CDS |
| AGTTTCCATAGTGACGAGCG+AGG | 0.625401 | 1.4:+88118071 | None:intergenic |
| ATAACAGTACCTCATGCAGT+TGG | 0.628319 | 1.4:-88117011 | MS.gene90797:CDS |
| TTTGAAATCCCCATCCTCTG+TGG | 0.629315 | 1.4:-88112746 | MS.gene90797:CDS |
| GGTACTGTTATGCGTCCTGA+GGG | 0.629374 | 1.4:+88117023 | None:intergenic |
| ATTCCAATTCCTCTTAAACA+TGG | 0.631936 | 1.4:+88118246 | None:intergenic |
| GCTTCTAATTCACCGCCGCA+CGG | 0.637444 | 1.4:-88112806 | MS.gene90797:CDS |
| CCTCACGACACATATAAGCA+AGG | 0.639408 | 1.4:+88114011 | None:intergenic |
| ATGGAAGCATATGCTACAGG+TGG | 0.647561 | 1.4:+88112655 | None:intergenic |
| CTCACGACACATATAAGCAA+GGG | 0.650006 | 1.4:+88114012 | None:intergenic |
| GATGCCCAGCCAACTGCATG+AGG | 0.652113 | 1.4:+88117002 | None:intergenic |
| GATTCATCCCGTAAATACAT+GGG | 0.664572 | 1.4:-88116728 | MS.gene90797:CDS |
| TGTGCCAGCCAAACCAACAG+AGG | 0.665249 | 1.4:+88116980 | None:intergenic |
| CACAGCCCTACTAGCAACGC+AGG | 0.666638 | 1.4:-88116961 | MS.gene90797:intron |
| ATACAAATGAATACAGAACC+AGG | 0.669177 | 1.4:+88116767 | None:intergenic |
| ATTGACGAGTCTGGAATACA+GGG | 0.669841 | 1.4:+88118216 | None:intergenic |
| AGCGAGGGAGATGAGATCGG+TGG | 0.677460 | 1.4:+88118087 | None:intergenic |
| GAGATCGGTGGACTTAGAGG+CGG | 0.679183 | 1.4:+88118099 | None:intergenic |
| CCTTGCTTATATGTGTCGTG+AGG | 0.692006 | 1.4:-88114011 | MS.gene90797:CDS |
| TCTATAAAACGAAAACGCTG+CGG | 0.692808 | 1.4:+88112900 | None:intergenic |
| AGTGTTGGTTATCCGTGCGG+CGG | 0.696361 | 1.4:+88112794 | None:intergenic |
| GTGTCGTGAGGACTATGCTG+CGG | 0.715426 | 1.4:-88113999 | MS.gene90797:CDS |
| AGAAGTGTTGGTTATCCGTG+CGG | 0.717760 | 1.4:+88112791 | None:intergenic |
| CTCTTGCTGATCCATCTGGG+CGG | 0.721838 | 1.4:-88113581 | MS.gene90797:CDS |
| CTTCTTAGAAGTCAACGCAG+AGG | 0.741087 | 1.4:-88112773 | MS.gene90797:CDS |
| CATCTCTGAAGTTTCCACAG+AGG | 0.745544 | 1.4:+88112732 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAATAAAAGTGAA+AGG | + | chr1.4:88112859-88112878 | None:intergenic | 10.0% |
| !!! | ATTTTAATATATAGCTATTT+AGG | + | chr1.4:88115961-88115980 | None:intergenic | 10.0% |
| !!! | CAAATTATTTTGAAATTATA+TGG | - | chr1.4:88116944-88116963 | MS.gene90797:intron | 10.0% |
| !!! | CATTTTTTTTTTTTTTTTGA+GGG | + | chr1.4:88117123-88117142 | None:intergenic | 10.0% |
| !! | ACATAATTAGATCTATTAAA+TGG | - | chr1.4:88113753-88113772 | MS.gene90797:intron | 15.0% |
| !! | ATTAATATGATAGAACATTA+TGG | - | chr1.4:88113345-88113364 | MS.gene90797:intron | 15.0% |
| !!! | AAATGTTGATAAAAAATCTA+AGG | + | chr1.4:88113731-88113750 | None:intergenic | 15.0% |
| !!! | GCATTTTTTTTTTTTTTTTG+AGG | + | chr1.4:88117124-88117143 | None:intergenic | 15.0% |
| !!! | TTATTTTAGTATTAGACAAT+TGG | - | chr1.4:88116415-88116434 | MS.gene90797:intron | 15.0% |
| !! | AGATTATAAGCATGAAAAAT+TGG | + | chr1.4:88116317-88116336 | None:intergenic | 20.0% |
| !! | ATAAACTATCACAATTTACT+GGG | + | chr1.4:88115619-88115638 | None:intergenic | 20.0% |
| !! | CAAATATAAAACTTTGTATG+TGG | + | chr1.4:88115018-88115037 | None:intergenic | 20.0% |
| !! | GAATTCAAAATTGTTCAATT+AGG | + | chr1.4:88114681-88114700 | None:intergenic | 20.0% |
| !! | TATAAACTATCACAATTTAC+TGG | + | chr1.4:88115620-88115639 | None:intergenic | 20.0% |
| !! | TGAATGAATGAAAAATATTG+AGG | + | chr1.4:88117192-88117211 | None:intergenic | 20.0% |
| !! | TGGAACCTTATAATAATAAT+AGG | - | chr1.4:88114357-88114376 | MS.gene90797:intron | 20.0% |
| !! | TTTGTATAAATAAGGTCATT+TGG | + | chr1.4:88114718-88114737 | None:intergenic | 20.0% |
| !!! | AAAACTAAATTATAGTTTGC+TGG | - | chr1.4:88112984-88113003 | MS.gene90797:intron | 20.0% |
| !!! | ACCTTATTTATACAAACAAA+GGG | - | chr1.4:88114722-88114741 | MS.gene90797:intron | 20.0% |
| !!! | CTTTTGATTCTCTTTAATTT+GGG | + | chr1.4:88114543-88114562 | None:intergenic | 20.0% |
| !!! | GAAATTAACGAAAAAGTATA+TGG | - | chr1.4:88114474-88114493 | MS.gene90797:intron | 20.0% |
| !!! | GTTTTACTTGTATATGAATT+AGG | - | chr1.4:88113427-88113446 | MS.gene90797:intron | 20.0% |
| !!! | TCTTTTGATTCTCTTTAATT+TGG | + | chr1.4:88114544-88114563 | None:intergenic | 20.0% |
| !!! | TTAAATCAGGTTACTTTTTT+AGG | - | chr1.4:88113120-88113139 | MS.gene90797:intron | 20.0% |
| !!! | TTTAGTTTTTAGATATCACA+TGG | + | chr1.4:88114282-88114301 | None:intergenic | 20.0% |
| ! | AAAAAAAATGCATGTTACAC+TGG | - | chr1.4:88117133-88117152 | MS.gene90797:intron | 25.0% |
| ! | AAAAGGCTTGAAATTCAAAA+AGG | + | chr1.4:88117628-88117647 | None:intergenic | 25.0% |
| ! | AAACTACAGTAACAAAACAA+GGG | + | chr1.4:88114431-88114450 | None:intergenic | 25.0% |
| ! | AATATGATAGAACATTATGG+TGG | - | chr1.4:88113348-88113367 | MS.gene90797:intron | 25.0% |
| ! | ACTAAATAGTTTGATTCTTC+CGG | - | chr1.4:88116797-88116816 | MS.gene90797:CDS | 25.0% |
| ! | ACTGTAGATGAATAACTTAA+TGG | + | chr1.4:88116626-88116645 | None:intergenic | 25.0% |
| ! | AGGGACCTATTATTATTATA+AGG | + | chr1.4:88114365-88114384 | None:intergenic | 25.0% |
| ! | ATAAAAGAGACGAAATTGAT+TGG | - | chr1.4:88113560-88113579 | MS.gene90797:CDS | 25.0% |
| ! | ATATGAATTAGGAAAGATAG+AGG | - | chr1.4:88113438-88113457 | MS.gene90797:intron | 25.0% |
| ! | ATGAAATTTATGTTGCTGTA+TGG | - | chr1.4:88117536-88117555 | MS.gene90797:intron | 25.0% |
| ! | CATAGGCTATAATCTTAAAT+AGG | + | chr1.4:88117519-88117538 | None:intergenic | 25.0% |
| ! | GTATAGTTAGTGATATTGAT+AGG | - | chr1.4:88114515-88114534 | MS.gene90797:intron | 25.0% |
| ! | GTTTATATAGTGATGAAGTT+TGG | - | chr1.4:88116914-88116933 | MS.gene90797:intron | 25.0% |
| ! | TACAGCAACATAAATTTCAT+AGG | + | chr1.4:88117536-88117555 | None:intergenic | 25.0% |
| ! | TATACAATCACCATTTGAAT+TGG | - | chr1.4:88117777-88117796 | MS.gene90797:CDS | 25.0% |
| ! | TCCTTTCTTTCAAATTCAAA+GGG | - | chr1.4:88115042-88115061 | MS.gene90797:intron | 25.0% |
| ! | TCTATATATCTAATCCCTTT+GGG | - | chr1.4:88117337-88117356 | MS.gene90797:intron | 25.0% |
| ! | TGAAAATAACCCACAAAAAA+AGG | + | chr1.4:88116749-88116768 | None:intergenic | 25.0% |
| ! | TTAACGAAATCCAATTCAAA+TGG | + | chr1.4:88117790-88117809 | None:intergenic | 25.0% |
| !! | AGAAAAACATTTGAGGTTTA+AGG | + | chr1.4:88113979-88113998 | None:intergenic | 25.0% |
| !! | ATTTTTCATTCATTCAGTGA+TGG | - | chr1.4:88117196-88117215 | MS.gene90797:intron | 25.0% |
| !! | CCAAAAAAATGTTATTTGTG+CGG | + | chr1.4:88117057-88117076 | None:intergenic | 25.0% |
| !! | GACCTTATTTATACAAACAA+AGG | - | chr1.4:88114721-88114740 | MS.gene90797:intron | 25.0% |
| !! | TAAATGGTTGTGTCTATTTT+AGG | - | chr1.4:88113769-88113788 | MS.gene90797:intron | 25.0% |
| !! | TCGTTTTCTATACATGTAAA+AGG | - | chr1.4:88114452-88114471 | MS.gene90797:intron | 25.0% |
| !! | TTTTGTGAGAAAAACATTTG+AGG | + | chr1.4:88113986-88114005 | None:intergenic | 25.0% |
| !!! | CGCACAAATAACATTTTTTT+GGG | - | chr1.4:88117055-88117074 | MS.gene90797:CDS | 25.0% |
| !!! | GTTACTTTTTTAGGACAATA+TGG | - | chr1.4:88113129-88113148 | MS.gene90797:intron | 25.0% |
| !!! | TAAGGTTTTGTTTGAGAATT+TGG | + | chr1.4:88113713-88113732 | None:intergenic | 25.0% |
| !!! | TGTTGTGGTTTTTTTATTCT+TGG | + | chr1.4:88115484-88115503 | None:intergenic | 25.0% |
| AAAGGTTGTTGATGCTAAAA+TGG | + | chr1.4:88115234-88115253 | None:intergenic | 30.0% | |
| AAATCCAATAGAATGAGAGA+AGG | + | chr1.4:88116561-88116580 | None:intergenic | 30.0% | |
| AATGGTAACCAAAAGATCAA+AGG | - | chr1.4:88118168-88118187 | MS.gene90797:CDS | 30.0% | |
| AATTAGGAAAGATAGAGGAA+TGG | - | chr1.4:88113443-88113462 | MS.gene90797:intron | 30.0% | |
| AATTGTCTATATGCTGAAAG+TGG | - | chr1.4:88116492-88116511 | MS.gene90797:intron | 30.0% | |
| ACGATGGATAAGTATATAGT+AGG | + | chr1.4:88113161-88113180 | None:intergenic | 30.0% | |
| AGGGATAAGAAAAAAAGGAA+GGG | + | chr1.4:88113690-88113709 | None:intergenic | 30.0% | |
| ATAAAACTTTGTATGTGGCT+TGG | + | chr1.4:88115013-88115032 | None:intergenic | 30.0% | |
| ATACAAATGAATACAGAACC+AGG | + | chr1.4:88114104-88114123 | None:intergenic | 30.0% | |
| ATCTTATACATTTCTTCCTG+TGG | - | chr1.4:88116281-88116300 | MS.gene90797:intron | 30.0% | |
| ATGCATAAGAAAGAGACAAA+AGG | + | chr1.4:88114221-88114240 | None:intergenic | 30.0% | |
| ATTCAGTTAAACTAAACCGT+AGG | + | chr1.4:88117020-88117039 | None:intergenic | 30.0% | |
| ATTCCAATTCCTCTTAAACA+TGG | + | chr1.4:88112625-88112644 | None:intergenic | 30.0% | |
| CAATGAAGGAAAATAAACCA+TGG | - | chr1.4:88113644-88113663 | MS.gene90797:intron | 30.0% | |
| CAGCATATAGACAATTAATC+TGG | + | chr1.4:88116488-88116507 | None:intergenic | 30.0% | |
| CTCCTTTCTTTCAAATTCAA+AGG | - | chr1.4:88115041-88115060 | MS.gene90797:intron | 30.0% | |
| CTCTATATATCTAATCCCTT+TGG | - | chr1.4:88117336-88117355 | MS.gene90797:intron | 30.0% | |
| CTGTACGAGGAAATAAAAAA+AGG | - | chr1.4:88113270-88113289 | MS.gene90797:intron | 30.0% | |
| CTTGTCTATATCTAATCTCA+CGG | + | chr1.4:88117667-88117686 | None:intergenic | 30.0% | |
| GAAACTACAGTAACAAAACA+AGG | + | chr1.4:88114432-88114451 | None:intergenic | 30.0% | |
| GTCAGTATCATCTTATGTTA+TGG | - | chr1.4:88116161-88116180 | MS.gene90797:intron | 30.0% | |
| GTTGGTATTAAAACATACGA+TGG | + | chr1.4:88113177-88113196 | None:intergenic | 30.0% | |
| TCCCTTTGAATTTGAAAGAA+AGG | + | chr1.4:88115046-88115065 | None:intergenic | 30.0% | |
| TCTTTCAAATTCAAAGGGAA+TGG | - | chr1.4:88115047-88115066 | MS.gene90797:intron | 30.0% | |
| TGTTCAATTAGGAACCTTAT+TGG | + | chr1.4:88114670-88114689 | None:intergenic | 30.0% | |
| TTCTCTCATTCTATTGGATT+TGG | - | chr1.4:88116560-88116579 | MS.gene90797:intron | 30.0% | |
| TTGAATTGGATTTCGTTAAG+CGG | - | chr1.4:88117791-88117810 | MS.gene90797:CDS | 30.0% | |
| TTTCCAGATATAGAAACCTA+CGG | - | chr1.4:88117001-88117020 | MS.gene90797:CDS | 30.0% | |
| TTTGGAGGGATAAGAAAAAA+AGG | + | chr1.4:88113695-88113714 | None:intergenic | 30.0% | |
| ! | GCCCTTTGTTTGTATAAATA+AGG | + | chr1.4:88114726-88114745 | None:intergenic | 30.0% |
| ! | TAATTTGGGTTCCTATCAAT+TGG | + | chr1.4:88114529-88114548 | None:intergenic | 30.0% |
| ! | TGCTTTGATGAACTTTTGAA+AGG | + | chr1.4:88114385-88114404 | None:intergenic | 30.0% |
| !! | AACATTGTAGCTTTATGACA+AGG | - | chr1.4:88114034-88114053 | MS.gene90797:CDS | 30.0% |
| !! | ACTAAATTATAGTTTGCTGG+TGG | - | chr1.4:88112987-88113006 | MS.gene90797:intron | 30.0% |
| !! | ATACTCAAAACTCTGAAACA+GGG | - | chr1.4:88117753-88117772 | MS.gene90797:intron | 30.0% |
| !! | ATGCAGTATTTGTGTTGATT+AGG | + | chr1.4:88114781-88114800 | None:intergenic | 30.0% |
| !! | CATGGTTTATTTTCCTTCAT+TGG | + | chr1.4:88113646-88113665 | None:intergenic | 30.0% |
| !! | GCTTTGATGAACTTTTGAAA+GGG | + | chr1.4:88114384-88114403 | None:intergenic | 30.0% |
| !! | TATACTCAAAACTCTGAAAC+AGG | - | chr1.4:88117752-88117771 | MS.gene90797:intron | 30.0% |
| !! | TTTGTGGGTTATTTTCAGAT+GGG | - | chr1.4:88116752-88116771 | MS.gene90797:CDS | 30.0% |
| !! | TTTTGTGGGTTATTTTCAGA+TGG | - | chr1.4:88116751-88116770 | MS.gene90797:CDS | 30.0% |
| !!! | ATGTTTTGACCACAATGTTT+TGG | - | chr1.4:88117857-88117876 | MS.gene90797:CDS | 30.0% |
| !!! | ATTAGGAACCTTATTGGTTT+TGG | + | chr1.4:88114664-88114683 | None:intergenic | 30.0% |
| !!! | CCGCACAAATAACATTTTTT+TGG | - | chr1.4:88117054-88117073 | MS.gene90797:CDS | 30.0% |
| !!! | GTTTTGTTTGAGAATTTGGA+GGG | + | chr1.4:88113709-88113728 | None:intergenic | 30.0% |
| !!! | TTAGGAACCTTATTGGTTTT+GGG | + | chr1.4:88114663-88114682 | None:intergenic | 30.0% |
| AAAATAAACCATGGAAAGCG+GGG | - | chr1.4:88113653-88113672 | MS.gene90797:intron | 35.0% | |
| AAACCGTAGGTTTCTATATC+TGG | + | chr1.4:88117007-88117026 | None:intergenic | 35.0% | |
| AAATCCAGTTTGAACCACAA+GGG | - | chr1.4:88116971-88116990 | MS.gene90797:CDS | 35.0% | |
| AAATGAATACAGAACCAGGT+TGG | + | chr1.4:88114100-88114119 | None:intergenic | 35.0% | |
| AAGAATCAGAACCAAAACTG+TGG | + | chr1.4:88115349-88115368 | None:intergenic | 35.0% | |
| AATACACCAGACATGTGAAT+AGG | + | chr1.4:88117243-88117262 | None:intergenic | 35.0% | |
| ACTATCACAATTTACTGGGA+CGG | + | chr1.4:88115615-88115634 | None:intergenic | 35.0% | |
| AGACTAATATGTTAGCTGCT+GGG | - | chr1.4:88114064-88114083 | MS.gene90797:CDS | 35.0% | |
| AGATTCATCCCGTAAATACA+TGG | - | chr1.4:88114139-88114158 | MS.gene90797:intron | 35.0% | |
| AGTCGCAAGGATAATAGAAT+TGG | + | chr1.4:88115191-88115210 | None:intergenic | 35.0% | |
| AGTTAGAAAAAGAGAGCAAG+AGG | + | chr1.4:88115102-88115121 | None:intergenic | 35.0% | |
| ATAACCCACAAAAAAAGGTG+AGG | + | chr1.4:88116744-88116763 | None:intergenic | 35.0% | |
| ATACATTTCTTCCTGTGGTA+TGG | - | chr1.4:88116286-88116305 | MS.gene90797:intron | 35.0% | |
| ATAGCTATTTAGGAGCAGTT+AGG | + | chr1.4:88115951-88115970 | None:intergenic | 35.0% | |
| ATCTCACTTATCTGATGAAG+AGG | - | chr1.4:88116051-88116070 | MS.gene90797:intron | 35.0% | |
| ATGCTTTCCTATACTTGCTT+GGG | - | chr1.4:88113066-88113085 | MS.gene90797:intron | 35.0% | |
| ATGGCCATGATTAGAGAATT+TGG | + | chr1.4:88115422-88115441 | None:intergenic | 35.0% | |
| ATGTTTCTTCCCATGTAAAC+AGG | - | chr1.4:88117886-88117905 | MS.gene90797:intron | 35.0% | |
| CAGAATTAAGTTAACAGACG+CGG | + | chr1.4:88113199-88113218 | None:intergenic | 35.0% | |
| CATACCTTCTCTCATTCTAT+TGG | - | chr1.4:88116554-88116573 | MS.gene90797:intron | 35.0% | |
| CATTTACCTATTCACATGTC+TGG | - | chr1.4:88117234-88117253 | MS.gene90797:intron | 35.0% | |
| CCTACTCTCAACAACAATTT+GGG | + | chr1.4:88114331-88114350 | None:intergenic | 35.0% | |
| CTACTCTCAACAACAATTTG+GGG | + | chr1.4:88114330-88114349 | None:intergenic | 35.0% | |
| GAAAATAAACCATGGAAAGC+GGG | - | chr1.4:88113652-88113671 | MS.gene90797:intron | 35.0% | |
| GAAAGATAGAGGAATGGAAA+GGG | - | chr1.4:88113449-88113468 | MS.gene90797:intron | 35.0% | |
| GAGGGATAAGAAAAAAAGGA+AGG | + | chr1.4:88113691-88113710 | None:intergenic | 35.0% | |
| GATAAGTGAGATGAAACATG+AGG | + | chr1.4:88116043-88116062 | None:intergenic | 35.0% | |
| GATTCATCCCGTAAATACAT+GGG | - | chr1.4:88114140-88114159 | MS.gene90797:intron | 35.0% | |
| GCACTCAACAGATAAACAAA+TGG | + | chr1.4:88115387-88115406 | None:intergenic | 35.0% | |
| GCAGTTAGGCAGTTTATTAA+AGG | + | chr1.4:88115937-88115956 | None:intergenic | 35.0% | |
| GGAAAATAAACCATGGAAAG+CGG | - | chr1.4:88113651-88113670 | MS.gene90797:intron | 35.0% | |
| GGGATAAGAAAAAAAGGAAG+GGG | + | chr1.4:88113689-88113708 | None:intergenic | 35.0% | |
| GTCGCAAGGATAATAGAATT+GGG | + | chr1.4:88115190-88115209 | None:intergenic | 35.0% | |
| GTCTGGTGTATTGCAAATTT+AGG | - | chr1.4:88117251-88117270 | MS.gene90797:intron | 35.0% | |
| GTTAGAAAAAGAGAGCAAGA+GGG | + | chr1.4:88115101-88115120 | None:intergenic | 35.0% | |
| GTTCATCAAAGCACACAAAT+TGG | - | chr1.4:88114392-88114411 | MS.gene90797:intron | 35.0% | |
| TAACCCACAAAAAAAGGTGA+GGG | + | chr1.4:88116743-88116762 | None:intergenic | 35.0% | |
| TACAGTAACAAAACAAGGGT+AGG | + | chr1.4:88114427-88114446 | None:intergenic | 35.0% | |
| TAGACTAGATAGACTGATAG+AGG | - | chr1.4:88113235-88113254 | MS.gene90797:intron | 35.0% | |
| TCAAGAATGATGCCATAATG+AGG | - | chr1.4:88113801-88113820 | MS.gene90797:intron | 35.0% | |
| TCAGAGATGTATGACAAGAA+TGG | - | chr1.4:88118150-88118169 | MS.gene90797:CDS | 35.0% | |
| TCGCAAGGATAATAGAATTG+GGG | + | chr1.4:88115189-88115208 | None:intergenic | 35.0% | |
| TCTATAAAACGAAAACGCTG+CGG | + | chr1.4:88117971-88117990 | None:intergenic | 35.0% | |
| TGCTCCAAATTCTCTAATCA+TGG | - | chr1.4:88115415-88115434 | MS.gene90797:intron | 35.0% | |
| TGTTTCTTCCCATGTAAACA+GGG | - | chr1.4:88117887-88117906 | MS.gene90797:intron | 35.0% | |
| TTGTGGTTCAAACTGGATTT+GGG | + | chr1.4:88116971-88116990 | None:intergenic | 35.0% | |
| TTTAAACCCCGAGTCAATAT+GGG | - | chr1.4:88116121-88116140 | MS.gene90797:intron | 35.0% | |
| ! | AAATTGTTGTTGAGAGTAGG+GGG | - | chr1.4:88114331-88114350 | MS.gene90797:intron | 35.0% |
| ! | AGTAACCTGATTTAAAGTGC+TGG | + | chr1.4:88113115-88113134 | None:intergenic | 35.0% |
| ! | ATTTCAAGCCTTTTTGCTCA+TGG | - | chr1.4:88117634-88117653 | MS.gene90797:intron | 35.0% |
| ! | CAAATTGTTGTTGAGAGTAG+GGG | - | chr1.4:88114330-88114349 | MS.gene90797:intron | 35.0% |
| ! | CAATGAATTTTCACCTTCGT+CGG | + | chr1.4:88115258-88115277 | None:intergenic | 35.0% |
| ! | CAGCTCATCTAAAGTGAATT+GGG | + | chr1.4:88116667-88116686 | None:intergenic | 35.0% |
| ! | CCAAATTGTTGTTGAGAGTA+GGG | - | chr1.4:88114329-88114348 | MS.gene90797:intron | 35.0% |
| ! | TCAGCTCATCTAAAGTGAAT+TGG | + | chr1.4:88116668-88116687 | None:intergenic | 35.0% |
| ! | TTGATGGTCTTCTCTAATAC+TGG | - | chr1.4:88115299-88115318 | MS.gene90797:intron | 35.0% |
| ! | TTTCAAGCCTTTTTGCTCAT+GGG | - | chr1.4:88117635-88117654 | MS.gene90797:intron | 35.0% |
| !! | GAAGAGTATTGAACGAGAAA+GGG | + | chr1.4:88115166-88115185 | None:intergenic | 35.0% |
| !! | GAGAAGGTATGCTTATTTTC+AGG | + | chr1.4:88116545-88116564 | None:intergenic | 35.0% |
| !! | TCTTTATCTCCCCGTTTTTA+TGG | - | chr1.4:88118035-88118054 | MS.gene90797:intron | 35.0% |
| !! | TGACTGGAAGTCATTTTCTA+TGG | + | chr1.4:88115441-88115460 | None:intergenic | 35.0% |
| !!! | GGTTTTGTTTGAGAATTTGG+AGG | + | chr1.4:88113710-88113729 | None:intergenic | 35.0% |
| AAAAGATCAAAGGCAGGCAA+GGG | - | chr1.4:88118178-88118197 | MS.gene90797:CDS | 40.0% | |
| AAACCTTATCCCACTAAGTG+GGG | + | chr1.4:88113394-88113413 | None:intergenic | 40.0% | |
| AAATAAACCATGGAAAGCGG+GGG | - | chr1.4:88113654-88113673 | MS.gene90797:intron | 40.0% | |
| AAATTCAAAGGGAATGGCTC+CGG | - | chr1.4:88115053-88115072 | MS.gene90797:intron | 40.0% | |
| ACTCATGTGATAAGTTGCAG+TGG | + | chr1.4:88115538-88115557 | None:intergenic | 40.0% | |
| AGAGAAATGTCTCTTCTCTG+AGG | + | chr1.4:88114635-88114654 | None:intergenic | 40.0% | |
| AGAGAGATGAAGATTGGAAG+AGG | + | chr1.4:88112739-88112758 | None:intergenic | 40.0% | |
| AGTTACCCTATCAATACCAC+CGG | - | chr1.4:88114862-88114881 | MS.gene90797:intron | 40.0% | |
| ATAACAGTACCTCATGCAGT+TGG | - | chr1.4:88113857-88113876 | MS.gene90797:intron | 40.0% | |
| ATACATGGGGAAAACAGAGT+GGG | + | chr1.4:88116693-88116712 | None:intergenic | 40.0% | |
| ATCATGACAGAGCAGTATGT+AGG | + | chr1.4:88116217-88116236 | None:intergenic | 40.0% | |
| ATCTGCCAGCACTTTAAATC+AGG | - | chr1.4:88113107-88113126 | MS.gene90797:intron | 40.0% | |
| ATGAGGCTTCCATATCTGTT+AGG | + | chr1.4:88116026-88116045 | None:intergenic | 40.0% | |
| ATTAAGTTAACAGACGCGGT+TGG | + | chr1.4:88113195-88113214 | None:intergenic | 40.0% | |
| CAAACCTTATCCCACTAAGT+GGG | + | chr1.4:88113395-88113414 | None:intergenic | 40.0% | |
| CAAATCCAGTTTGAACCACA+AGG | - | chr1.4:88116970-88116989 | MS.gene90797:CDS | 40.0% | |
| CAAGCAAGTATAGGAAAGCA+TGG | + | chr1.4:88113067-88113086 | None:intergenic | 40.0% | |
| CAGACTAATATGTTAGCTGC+TGG | - | chr1.4:88114063-88114082 | MS.gene90797:CDS | 40.0% | |
| CAGCAGCTAACATATTAGTC+TGG | + | chr1.4:88114065-88114084 | None:intergenic | 40.0% | |
| CATATGCCAAGAAACCCAAA+GGG | + | chr1.4:88117354-88117373 | None:intergenic | 40.0% | |
| CATGAGTCTCCAAAACATTG+TGG | + | chr1.4:88117869-88117888 | None:intergenic | 40.0% | |
| CATGCTTTCCTATACTTGCT+TGG | - | chr1.4:88113065-88113084 | MS.gene90797:intron | 40.0% | |
| CCAATTCCTCTTAAACATGG+TGG | + | chr1.4:88112622-88112641 | None:intergenic | 40.0% | |
| CCACCATGTTTAAGAGGAAT+TGG | - | chr1.4:88112619-88112638 | MS.gene90797:CDS | 40.0% | |
| CCCTACTCTCAACAACAATT+TGG | + | chr1.4:88114332-88114351 | None:intergenic | 40.0% | |
| CGCAAGGATAATAGAATTGG+GGG | + | chr1.4:88115188-88115207 | None:intergenic | 40.0% | |
| CGCGTCTGTTAACTTAATTC+TGG | - | chr1.4:88113197-88113216 | MS.gene90797:intron | 40.0% | |
| CGGAACAGCTGAATTTCAAA+GGG | + | chr1.4:88114307-88114326 | None:intergenic | 40.0% | |
| CTCACGACACATATAAGCAA+GGG | + | chr1.4:88116859-88116878 | None:intergenic | 40.0% | |
| CTCATGTGATAAGTTGCAGT+GGG | + | chr1.4:88115537-88115556 | None:intergenic | 40.0% | |
| CTTGTCAAGGTTCCAACAAT+GGG | + | chr1.4:88114976-88114995 | None:intergenic | 40.0% | |
| CTTGTGGTTCAAACTGGATT+TGG | + | chr1.4:88116972-88116991 | None:intergenic | 40.0% | |
| CTTTAAACCCCGAGTCAATA+TGG | - | chr1.4:88116120-88116139 | MS.gene90797:intron | 40.0% | |
| GAGAAGGAAACCAGTGTTAT+CGG | + | chr1.4:88115669-88115688 | None:intergenic | 40.0% | |
| GAGAGATGAAGATTGGAAGA+GGG | + | chr1.4:88112738-88112757 | None:intergenic | 40.0% | |
| GAGTGAAATATGTCTGTACG+AGG | - | chr1.4:88113257-88113276 | MS.gene90797:intron | 40.0% | |
| GCAGTTAGGCAGTTTATTAC+AGG | + | chr1.4:88114757-88114776 | None:intergenic | 40.0% | |
| GGAAAGATAGAGGAATGGAA+AGG | - | chr1.4:88113448-88113467 | MS.gene90797:intron | 40.0% | |
| GTAACCAAAAGATCAAAGGC+AGG | - | chr1.4:88118172-88118191 | MS.gene90797:CDS | 40.0% | |
| GTACACAATTACCCCAAAAG+TGG | + | chr1.4:88114192-88114211 | None:intergenic | 40.0% | |
| GTCTATATGCTGAAAGTGGA+AGG | - | chr1.4:88116496-88116515 | MS.gene90797:intron | 40.0% | |
| GTTTCTTCCCATGTAAACAG+GGG | - | chr1.4:88117888-88117907 | MS.gene90797:intron | 40.0% | |
| GTTTCTTTAACTCAGCCTTG+AGG | + | chr1.4:88114926-88114945 | None:intergenic | 40.0% | |
| TAAGCAAGGGCCATAAAATG+TGG | + | chr1.4:88116846-88116865 | None:intergenic | 40.0% | |
| TAATGAGGAGAACGAGTCAA+AGG | - | chr1.4:88113816-88113835 | MS.gene90797:intron | 40.0% | |
| TAGAAGCCCAGCCATAAAAA+CGG | + | chr1.4:88118049-88118068 | None:intergenic | 40.0% | |
| TAGATCTTGTCCTCCACTTT+AGG | - | chr1.4:88116452-88116471 | MS.gene90797:intron | 40.0% | |
| TATATCTAATCTCACGGCCA+TGG | + | chr1.4:88117661-88117680 | None:intergenic | 40.0% | |
| TATCGGAGATGGATGGAATA+TGG | + | chr1.4:88115652-88115671 | None:intergenic | 40.0% | |
| TATGAAGGAGCAGGCAAAAA+CGG | + | chr1.4:88118249-88118268 | None:intergenic | 40.0% | |
| TATTGCAAGTGTAAGTGCAG+TGG | + | chr1.4:88117944-88117963 | None:intergenic | 40.0% | |
| TCAAACAAAGAAGAGTCGCA+AGG | + | chr1.4:88115204-88115223 | None:intergenic | 40.0% | |
| TCATATGCCAAGAAACCCAA+AGG | + | chr1.4:88117355-88117374 | None:intergenic | 40.0% | |
| TGAAGAAGAAGAAGAGAAGG+TGG | + | chr1.4:88112715-88112734 | None:intergenic | 40.0% | |
| TGATCACTGTGACTCATTTC+TGG | - | chr1.4:88113301-88113320 | MS.gene90797:intron | 40.0% | |
| TTAGAGAAGACCATCAACGA+TGG | + | chr1.4:88115296-88115315 | None:intergenic | 40.0% | |
| TTCCATATCTGTTAGGCATC+CGG | + | chr1.4:88116019-88116038 | None:intergenic | 40.0% | |
| TTCTTAGAAGTCAACGCAGA+GGG | - | chr1.4:88118096-88118115 | MS.gene90797:CDS | 40.0% | |
| TTTCTTCCCATGTAAACAGG+GGG | - | chr1.4:88117889-88117908 | MS.gene90797:intron | 40.0% | |
| TTTGAATTCCCCTTCTGTTG+TGG | - | chr1.4:88114692-88114711 | MS.gene90797:intron | 40.0% | |
| ! | AATTGACGAGTCTGGAATAC+AGG | + | chr1.4:88112656-88112675 | None:intergenic | 40.0% |
| ! | AATTGGAGTATCCATACCAC+AGG | + | chr1.4:88116300-88116319 | None:intergenic | 40.0% |
| ! | ACAGAGCAGTATGTAGGTTT+TGG | + | chr1.4:88116211-88116230 | None:intergenic | 40.0% |
| ! | ACTCTGTTTTCCCCATGTAT+GGG | - | chr1.4:88116693-88116712 | MS.gene90797:CDS | 40.0% |
| ! | ATTGACGAGTCTGGAATACA+GGG | + | chr1.4:88112655-88112674 | None:intergenic | 40.0% |
| ! | ATTTTCACCTTCGTCGGAAA+AGG | + | chr1.4:88115252-88115271 | None:intergenic | 40.0% |
| ! | CCCAAATTGTTGTTGAGAGT+AGG | - | chr1.4:88114328-88114347 | MS.gene90797:intron | 40.0% |
| ! | CTGGCAGATACCACATTTTA+TGG | - | chr1.4:88116833-88116852 | MS.gene90797:intron | 40.0% |
| ! | GTTTTATAGAGACCGCACTA+AGG | - | chr1.4:88117981-88118000 | MS.gene90797:intron | 40.0% |
| ! | TAGAGAATTTGGAGCACAGA+TGG | + | chr1.4:88115411-88115430 | None:intergenic | 40.0% |
| ! | TCTAATCCCTTTGGGTTTCT+TGG | - | chr1.4:88117345-88117364 | MS.gene90797:intron | 40.0% |
| ! | TCTGTCATCTTCCACAGTTT+TGG | - | chr1.4:88115335-88115354 | MS.gene90797:intron | 40.0% |
| ! | TTGACTCGTTCTCCTCATTA+TGG | + | chr1.4:88113816-88113835 | None:intergenic | 40.0% |
| !! | AGGATGAAAAAGCGTTGTTG+TGG | + | chr1.4:88115499-88115518 | None:intergenic | 40.0% |
| !! | ATGTGGCTTGGTTGTTTGAA+GGG | + | chr1.4:88115001-88115020 | None:intergenic | 40.0% |
| !! | CGTTGACTTCTAAGAAGTGT+TGG | + | chr1.4:88118092-88118111 | None:intergenic | 40.0% |
| !! | GCTTTATGTGCTTTGAGATG+TGG | - | chr1.4:88114007-88114026 | MS.gene90797:CDS | 40.0% |
| !! | GGAAGAGTATTGAACGAGAA+AGG | + | chr1.4:88115167-88115186 | None:intergenic | 40.0% |
| !! | TATGTGGCTTGGTTGTTTGA+AGG | + | chr1.4:88115002-88115021 | None:intergenic | 40.0% |
| !! | TCATTTCTGGCTTTGTGAGT+TGG | - | chr1.4:88113314-88113333 | MS.gene90797:intron | 40.0% |
| !! | TGTGTTGATTAGGAGCAGTT+AGG | + | chr1.4:88114771-88114790 | None:intergenic | 40.0% |
| !!! | TGTCCCTCACCTTTTTTTGT+GGG | - | chr1.4:88116737-88116756 | MS.gene90797:CDS | 40.0% |
| !!! | TTTTGCTCTGGGATTACAGA+GGG | + | chr1.4:88114609-88114628 | None:intergenic | 40.0% |
| AAAAAGAGAGCAAGAGGGTG+GGG | + | chr1.4:88115096-88115115 | None:intergenic | 45.0% | |
| AACGGGGAGATAAAGAAGAC+TGG | + | chr1.4:88118031-88118050 | None:intergenic | 45.0% | |
| AAGACCATCAACGATGGAGA+AGG | + | chr1.4:88115290-88115309 | None:intergenic | 45.0% | |
| AATGACTTCCAGTCAGCATC+AGG | - | chr1.4:88115446-88115465 | MS.gene90797:intron | 45.0% | |
| ACAATGTCGTATGAAGGAGC+AGG | + | chr1.4:88118258-88118277 | None:intergenic | 45.0% | |
| ACATGCATGTGCCCATACAT+GGG | + | chr1.4:88116707-88116726 | None:intergenic | 45.0% | |
| ACGGGATGAATCTGCTTCAA+CGG | + | chr1.4:88114132-88114151 | None:intergenic | 45.0% | |
| ACTCTCTTGCTGATCCATCT+GGG | - | chr1.4:88117284-88117303 | MS.gene90797:intron | 45.0% | |
| AGAAAAAGAGAGCAAGAGGG+TGG | + | chr1.4:88115098-88115117 | None:intergenic | 45.0% | |
| AGAAGCCCAGCCATAAAAAC+GGG | + | chr1.4:88118048-88118067 | None:intergenic | 45.0% | |
| AGATAGAGGAATGGAAAGGG+TGG | - | chr1.4:88113452-88113471 | MS.gene90797:intron | 45.0% | |
| AGGAGGAGAGAGATGAAGAT+TGG | + | chr1.4:88112745-88112764 | None:intergenic | 45.0% | |
| ATCCCGTAAATACATGGGTG+GGG | - | chr1.4:88114145-88114164 | MS.gene90797:intron | 45.0% | |
| ATGAAGGAGCAGGCAAAAAC+GGG | + | chr1.4:88118248-88118267 | None:intergenic | 45.0% | |
| ATGACTTCCAGTCAGCATCA+GGG | - | chr1.4:88115447-88115466 | MS.gene90797:intron | 45.0% | |
| ATTGGACTAAAACCCTCCAG+GGG | + | chr1.4:88113628-88113647 | None:intergenic | 45.0% | |
| CAAAAGATCAAAGGCAGGCA+AGG | - | chr1.4:88118177-88118196 | MS.gene90797:CDS | 45.0% | |
| CACAATTACCCCAAAAGTGG+TGG | + | chr1.4:88114189-88114208 | None:intergenic | 45.0% | |
| CACTCACCTAAACAAGGTCA+GGG | + | chr1.4:88113483-88113502 | None:intergenic | 45.0% | |
| CATACATGGGGAAAACAGAG+TGG | + | chr1.4:88116694-88116713 | None:intergenic | 45.0% | |
| CATCCCGTAAATACATGGGT+GGG | - | chr1.4:88114144-88114163 | MS.gene90797:intron | 45.0% | |
| CATGGTACCCAAGCAAGTAT+AGG | + | chr1.4:88113076-88113095 | None:intergenic | 45.0% | |
| CATTGGACTAAAACCCTCCA+GGG | + | chr1.4:88113629-88113648 | None:intergenic | 45.0% | |
| CCAAACCTTATCCCACTAAG+TGG | + | chr1.4:88113396-88113415 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGGTT+TGG | - | chr1.4:88113393-88113412 | MS.gene90797:intron | 45.0% | |
| CCTCACGACACATATAAGCA+AGG | + | chr1.4:88116860-88116879 | None:intergenic | 45.0% | |
| CCTTGCTTATATGTGTCGTG+AGG | - | chr1.4:88116857-88116876 | MS.gene90797:intron | 45.0% | |
| CTCTCAACAACAATTTGGGG+CGG | + | chr1.4:88114327-88114346 | None:intergenic | 45.0% | |
| CTCTCTGCCCAAAACCAATA+AGG | - | chr1.4:88114653-88114672 | MS.gene90797:intron | 45.0% | |
| CTGAAGTTTCCACAGAGGAT+GGG | + | chr1.4:88118134-88118153 | None:intergenic | 45.0% | |
| CTGGAAATTTAGTGCCCTTG+TGG | + | chr1.4:88116988-88117007 | None:intergenic | 45.0% | |
| CTTCTTAGAAGTCAACGCAG+AGG | - | chr1.4:88118095-88118114 | MS.gene90797:CDS | 45.0% | |
| GAAAAAGAGAGCAAGAGGGT+GGG | + | chr1.4:88115097-88115116 | None:intergenic | 45.0% | |
| GAAACCAGTGTTATCGGAGA+TGG | + | chr1.4:88115663-88115682 | None:intergenic | 45.0% | |
| GAAGTTGTGAAGAGACGAAG+AGG | + | chr1.4:88112679-88112698 | None:intergenic | 45.0% | |
| GCGGAACAGCTGAATTTCAA+AGG | + | chr1.4:88114308-88114327 | None:intergenic | 45.0% | |
| GCTTGTCAAGGTTCCAACAA+TGG | + | chr1.4:88114977-88114996 | None:intergenic | 45.0% | |
| GGGTGAAGAAGAAGAAGAGA+AGG | + | chr1.4:88112718-88112737 | None:intergenic | 45.0% | |
| GGTCGGTAATGTTAGGTATC+CGG | + | chr1.4:88114884-88114903 | None:intergenic | 45.0% | |
| GTCATTTGGCCACAACAGAA+GGG | + | chr1.4:88114704-88114723 | None:intergenic | 45.0% | |
| TACATGCATGTGCCCATACA+TGG | + | chr1.4:88116708-88116727 | None:intergenic | 45.0% | |
| TACTCTCTTGCTGATCCATC+TGG | - | chr1.4:88117283-88117302 | MS.gene90797:intron | 45.0% | |
| TACTTGCTTGGGTACCATGA+TGG | - | chr1.4:88113077-88113096 | MS.gene90797:intron | 45.0% | |
| TATCAATTGGTCCGACCTAC+CGG | + | chr1.4:88115696-88115715 | None:intergenic | 45.0% | |
| TCACTCACCTAAACAAGGTC+AGG | + | chr1.4:88113484-88113503 | None:intergenic | 45.0% | |
| TCATCCCGTAAATACATGGG+TGG | - | chr1.4:88114143-88114162 | MS.gene90797:intron | 45.0% | |
| TCATTGGACTAAAACCCTCC+AGG | + | chr1.4:88113630-88113649 | None:intergenic | 45.0% | |
| TCATTTGGCCACAACAGAAG+GGG | + | chr1.4:88114703-88114722 | None:intergenic | 45.0% | |
| TCTTCCTTCTCCATCGTTGA+TGG | - | chr1.4:88115283-88115302 | MS.gene90797:intron | 45.0% | |
| TGAAGTTTCCACAGAGGATG+GGG | + | chr1.4:88118133-88118152 | None:intergenic | 45.0% | |
| TGCCAGAAATACAAAGCAGC+CGG | + | chr1.4:88116819-88116838 | None:intergenic | 45.0% | |
| TTAACTCAGCCTTGAGGACA+AGG | + | chr1.4:88114920-88114939 | None:intergenic | 45.0% | |
| TTCTAGCGGTCGGTAATGTT+AGG | + | chr1.4:88114891-88114910 | None:intergenic | 45.0% | |
| TTGGCACCACCATGTTTAAG+AGG | - | chr1.4:88112613-88112632 | MS.gene90797:CDS | 45.0% | |
| ! | ACTGGTTTCCTTCTCGTATC+CGG | - | chr1.4:88115674-88115693 | MS.gene90797:intron | 45.0% |
| ! | ACTTGAATTCTTTTGCCCCC+AGG | - | chr1.4:88114948-88114967 | MS.gene90797:intron | 45.0% |
| ! | AGTGGGATAAGGTTTGGTTG+TGG | - | chr1.4:88113399-88113418 | MS.gene90797:intron | 45.0% |
| ! | ATCTGGGACTGGATTTGTGT+TGG | - | chr1.4:88113017-88113036 | MS.gene90797:intron | 45.0% |
| ! | ATGGAAGCATATGCTACAGG+TGG | + | chr1.4:88118216-88118235 | None:intergenic | 45.0% |
| ! | CAAAAACGGGAAAGGTGCAA+TGG | + | chr1.4:88118235-88118254 | None:intergenic | 45.0% |
| ! | CACTCTGTTTTCCCCATGTA+TGG | - | chr1.4:88116692-88116711 | MS.gene90797:CDS | 45.0% |
| ! | CTTGCCTGCCTTTGATCTTT+TGG | + | chr1.4:88118179-88118198 | None:intergenic | 45.0% |
| ! | GAAAAACAGCCTTGTCCTCA+AGG | - | chr1.4:88114908-88114927 | MS.gene90797:intron | 45.0% |
| ! | GACCTTGTTTAGGTGAGTGA+GGG | - | chr1.4:88113484-88113503 | MS.gene90797:intron | 45.0% |
| ! | GAGAATCCCTGACCTTGTTT+AGG | - | chr1.4:88113474-88113493 | MS.gene90797:intron | 45.0% |
| ! | GCAATGGAAGCATATGCTAC+AGG | + | chr1.4:88118219-88118238 | None:intergenic | 45.0% |
| ! | GTTACACTGGTTGCTGCATT+TGG | - | chr1.4:88117146-88117165 | MS.gene90797:intron | 45.0% |
| ! | TCAACAACCTTTTCCGACGA+AGG | - | chr1.4:88115242-88115261 | MS.gene90797:intron | 45.0% |
| ! | TCTGAAGTTTCCACAGAGGA+TGG | + | chr1.4:88118135-88118154 | None:intergenic | 45.0% |
| ! | TCTGGGACTGGATTTGTGTT+GGG | - | chr1.4:88113018-88113037 | MS.gene90797:intron | 45.0% |
| ! | TCTTGTCCTCCACTTTAGGA+TGG | - | chr1.4:88116456-88116475 | MS.gene90797:intron | 45.0% |
| ! | TGACCTTGTTTAGGTGAGTG+AGG | - | chr1.4:88113483-88113502 | MS.gene90797:intron | 45.0% |
| ! | TGACTCCTCCCATATTGACT+CGG | + | chr1.4:88116132-88116151 | None:intergenic | 45.0% |
| ! | TGACTCGGGGTTTAAAGTAG+AGG | + | chr1.4:88116117-88116136 | None:intergenic | 45.0% |
| ! | TTCCGGCTGCTTTGTATTTC+TGG | - | chr1.4:88116814-88116833 | MS.gene90797:intron | 45.0% |
| ! | TTGTTGAGAGTAGGGGGTTT+TGG | - | chr1.4:88114337-88114356 | MS.gene90797:intron | 45.0% |
| ! | TTTGAAATCCCCATCCTCTG+TGG | - | chr1.4:88118122-88118141 | MS.gene90797:CDS | 45.0% |
| !! | AAACAGCATTGGTGGCTATG+AGG | - | chr1.4:88117311-88117330 | MS.gene90797:intron | 45.0% |
| !! | AGAAGTGTTGGTTATCCGTG+CGG | + | chr1.4:88118080-88118099 | None:intergenic | 45.0% |
| !! | AGGTATCCGGTGGTATTGAT+AGG | + | chr1.4:88114871-88114890 | None:intergenic | 45.0% |
| !! | ATCTCCCCGTTTTTATGGCT+GGG | - | chr1.4:88118040-88118059 | MS.gene90797:CDS | 45.0% |
| !! | CATCTCTGAAGTTTCCACAG+AGG | + | chr1.4:88118139-88118158 | None:intergenic | 45.0% |
| !! | GGAGGGTTTTAGTCCAATGA+AGG | - | chr1.4:88113630-88113649 | MS.gene90797:intron | 45.0% |
| !! | GGTATCCGGTGGTATTGATA+GGG | + | chr1.4:88114870-88114889 | None:intergenic | 45.0% |
| !! | GTGCTATTCCACCACTTTTG+GGG | - | chr1.4:88114178-88114197 | MS.gene90797:intron | 45.0% |
| !! | TATCTCCCCGTTTTTATGGC+TGG | - | chr1.4:88118039-88118058 | MS.gene90797:intron | 45.0% |
| !! | TGTGGCTTGGTTGTTTGAAG+GGG | + | chr1.4:88115000-88115019 | None:intergenic | 45.0% |
| !!! | AAGGCTGTTTTTCTAGCGGT+CGG | + | chr1.4:88114901-88114920 | None:intergenic | 45.0% |
| !!! | CTGTCCCTCACCTTTTTTTG+TGG | - | chr1.4:88116736-88116755 | MS.gene90797:CDS | 45.0% |
| !!! | CTTTTGCTCTGGGATTACAG+AGG | + | chr1.4:88114610-88114629 | None:intergenic | 45.0% |
| !!! | GGACAAGGCTGTTTTTCTAG+CGG | + | chr1.4:88114905-88114924 | None:intergenic | 45.0% |
| !!! | GGTGCTATTCCACCACTTTT+GGG | - | chr1.4:88114177-88114196 | MS.gene90797:intron | 45.0% |
| !!! | ATTTTAATATATAGTTATTT+AGG | + | chr1.4:88114826-88114845 | None:intergenic | 5.0% |
| AAACCCCGAGTCAATATGGG+AGG | - | chr1.4:88116124-88116143 | MS.gene90797:intron | 50.0% | |
| AACTCAATGGGGGAGGACTT+GGG | + | chr1.4:88113605-88113624 | None:intergenic | 50.0% | |
| AACTCTCCAAAGCTCGTCTC+AGG | - | chr1.4:88112829-88112848 | MS.gene90797:CDS | 50.0% | |
| AAGAGAACCCTGATGCTGAC+TGG | + | chr1.4:88115457-88115476 | None:intergenic | 50.0% | |
| AATGCGAGCTCTCACTTCAG+AGG | + | chr1.4:88116588-88116607 | None:intergenic | 50.0% | |
| ACCGCACTAAGGAAAGAGCT+CGG | - | chr1.4:88117992-88118011 | MS.gene90797:intron | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | + | chr1.4:88113382-88113401 | None:intergenic | 50.0% | |
| ACTGGATTTGTGTTGGGGAG+TGG | - | chr1.4:88113024-88113043 | MS.gene90797:intron | 50.0% | |
| AGCCCCCACCCATGTATTTA+CGG | + | chr1.4:88114151-88114170 | None:intergenic | 50.0% | |
| AGGTTCCAACAATGGGATCC+TGG | + | chr1.4:88114969-88114988 | None:intergenic | 50.0% | |
| AGTACCTCATGCAGTTGGCT+GGG | - | chr1.4:88113862-88113881 | MS.gene90797:intron | 50.0% | |
| AGTCACACCCCCTGTTTACA+TGG | + | chr1.4:88117899-88117918 | None:intergenic | 50.0% | |
| AGTCAGCATCAGGGTTCTCT+TGG | - | chr1.4:88115456-88115475 | MS.gene90797:intron | 50.0% | |
| AGTGCCCTTGTGGTTCAAAC+TGG | + | chr1.4:88116978-88116997 | None:intergenic | 50.0% | |
| AGTTTCCATAGTGACGAGCG+AGG | + | chr1.4:88112800-88112819 | None:intergenic | 50.0% | |
| ATCCTGCTGGATGGATCACA+AGG | + | chr1.4:88115592-88115611 | None:intergenic | 50.0% | |
| ATCTGGGCGGAAAACAGCAT+TGG | - | chr1.4:88117300-88117319 | MS.gene90797:intron | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | - | chr1.4:88113381-88113400 | MS.gene90797:intron | 50.0% | |
| CAAAAGCCAGGCTGCTAAAG+GGG | - | chr1.4:88116086-88116105 | MS.gene90797:intron | 50.0% | |
| CACCGGATGCCTAACAGATA+TGG | - | chr1.4:88116014-88116033 | MS.gene90797:intron | 50.0% | |
| CACTACCTGCGTTGCTAGTA+GGG | + | chr1.4:88113915-88113934 | None:intergenic | 50.0% | |
| CATATCTGTTAGGCATCCGG+TGG | + | chr1.4:88116016-88116035 | None:intergenic | 50.0% | |
| CATGCATGTGCCCATACATG+GGG | + | chr1.4:88116706-88116725 | None:intergenic | 50.0% | |
| CCAAAAGCCAGGCTGCTAAA+GGG | - | chr1.4:88116085-88116104 | MS.gene90797:intron | 50.0% | |
| CCAGTGTTATCGGAGATGGA+TGG | + | chr1.4:88115659-88115678 | None:intergenic | 50.0% | |
| CCATCCATCTCCGATAACAC+TGG | - | chr1.4:88115656-88115675 | MS.gene90797:intron | 50.0% | |
| CGAAGAGGAATTGACGAGTC+TGG | + | chr1.4:88112664-88112683 | None:intergenic | 50.0% | |
| CGGTAATGTTAGGTATCCGG+TGG | + | chr1.4:88114881-88114900 | None:intergenic | 50.0% | |
| CTACAGCCATCCTAAAGTGG+AGG | + | chr1.4:88116465-88116484 | None:intergenic | 50.0% | |
| CTGGGACTGGATTTGTGTTG+GGG | - | chr1.4:88113019-88113038 | MS.gene90797:intron | 50.0% | |
| GAAGCCCAGCCATAAAAACG+GGG | + | chr1.4:88118047-88118066 | None:intergenic | 50.0% | |
| GGTACTGTTATGCGTCCTGA+GGG | + | chr1.4:88113848-88113867 | None:intergenic | 50.0% | |
| GGTAGGTCGGACCAATTGAT+AGG | - | chr1.4:88115695-88115714 | MS.gene90797:intron | 50.0% | |
| GGTCATTTGGCCACAACAGA+AGG | + | chr1.4:88114705-88114724 | None:intergenic | 50.0% | |
| GGTTCCAACAATGGGATCCT+GGG | + | chr1.4:88114968-88114987 | None:intergenic | 50.0% | |
| GTCACACCCCCTGTTTACAT+GGG | + | chr1.4:88117898-88117917 | None:intergenic | 50.0% | |
| GTGGGCTTTCATGAGTATGG+AGG | + | chr1.4:88115519-88115538 | None:intergenic | 50.0% | |
| GTTCCAACAATGGGATCCTG+GGG | + | chr1.4:88114967-88114986 | None:intergenic | 50.0% | |
| GTTTCCATAGTGACGAGCGA+GGG | + | chr1.4:88112799-88112818 | None:intergenic | 50.0% | |
| GTTTCCTTCTCGTATCCGGT+AGG | - | chr1.4:88115678-88115697 | MS.gene90797:intron | 50.0% | |
| TCACTACCTGCGTTGCTAGT+AGG | + | chr1.4:88113916-88113935 | None:intergenic | 50.0% | |
| TCCCGTAAATACATGGGTGG+GGG | - | chr1.4:88114146-88114165 | MS.gene90797:intron | 50.0% | |
| TCCGAGCTCTTTCCTTAGTG+CGG | + | chr1.4:88117996-88118015 | None:intergenic | 50.0% | |
| TCCTGCTGGATGGATCACAA+GGG | + | chr1.4:88115591-88115610 | None:intergenic | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | - | chr1.4:88113388-88113407 | MS.gene90797:intron | 50.0% | |
| TGCCCTCACTCACCTAAACA+AGG | + | chr1.4:88113489-88113508 | None:intergenic | 50.0% | |
| TGCTGGTGGTTGCAACATCT+GGG | - | chr1.4:88113001-88113020 | MS.gene90797:intron | 50.0% | |
| TGGCTACAGCCATCCTAAAG+TGG | + | chr1.4:88116468-88116487 | None:intergenic | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | - | chr1.4:88113382-88113401 | MS.gene90797:intron | 50.0% | |
| TGTTTGAAGGGGGCTTGTCA+AGG | + | chr1.4:88114989-88115008 | None:intergenic | 50.0% | |
| TTCCAACAATGGGATCCTGG+GGG | + | chr1.4:88114966-88114985 | None:intergenic | 50.0% | |
| TTGCTGGTGGTTGCAACATC+TGG | - | chr1.4:88113000-88113019 | MS.gene90797:intron | 50.0% | |
| ! | AGGTACTGTTATGCGTCCTG+AGG | + | chr1.4:88113849-88113868 | None:intergenic | 50.0% |
| ! | GATGAGATCGGTGGACTTAG+AGG | + | chr1.4:88112775-88112794 | None:intergenic | 50.0% |
| ! | GCAGTGGGCTTTCATGAGTA+TGG | + | chr1.4:88115522-88115541 | None:intergenic | 50.0% |
| ! | GTTTTACCCCTTTAGCAGCC+TGG | + | chr1.4:88116095-88116114 | None:intergenic | 50.0% |
| ! | TAAACAGGGGGTGTGACTTC+AGG | - | chr1.4:88117901-88117920 | MS.gene90797:intron | 50.0% |
| !! | ACTCCTCCCATATTGACTCG+GGG | + | chr1.4:88116130-88116149 | None:intergenic | 50.0% |
| !! | AGGCATCCGGTGGTATTGAT+AGG | + | chr1.4:88116006-88116025 | None:intergenic | 50.0% |
| !! | CCTTTAGCAGCCTGGCTTTT+GGG | + | chr1.4:88116087-88116106 | None:intergenic | 50.0% |
| !! | CTCTGAGGAGCTTTTGCTCT+GGG | + | chr1.4:88114620-88114639 | None:intergenic | 50.0% |
| !! | GACTCCTCCCATATTGACTC+GGG | + | chr1.4:88116131-88116150 | None:intergenic | 50.0% |
| !! | GAGACGAGCTTTGGAGAGTT+CGG | + | chr1.4:88112829-88112848 | None:intergenic | 50.0% |
| !! | GGCATCCGGTGGTATTGATA+GGG | + | chr1.4:88116005-88116024 | None:intergenic | 50.0% |
| !! | GTGGCTTGGTTGTTTGAAGG+GGG | + | chr1.4:88114999-88115018 | None:intergenic | 50.0% |
| !! | TCTCTGAGGAGCTTTTGCTC+TGG | + | chr1.4:88114621-88114640 | None:intergenic | 50.0% |
| !!! | AATGCTGTTTTCCGCCCAGA+TGG | + | chr1.4:88117301-88117320 | None:intergenic | 50.0% |
| !!! | CGGTGCTATTCCACCACTTT+TGG | - | chr1.4:88114176-88114195 | MS.gene90797:intron | 50.0% |
| AACCCTCCAGGGGAACTCAA+TGG | + | chr1.4:88113618-88113637 | None:intergenic | 55.0% | |
| ACCCTCCAGGGGAACTCAAT+GGG | + | chr1.4:88113617-88113636 | None:intergenic | 55.0% | |
| ACGAGCGAGGGAGATGAGAT+CGG | + | chr1.4:88112787-88112806 | None:intergenic | 55.0% | |
| AGAGCACACTCCCAAAAGCC+AGG | - | chr1.4:88116074-88116093 | MS.gene90797:intron | 55.0% | |
| ATCTCCCTCGCTCGTCACTA+TGG | - | chr1.4:88112792-88112811 | MS.gene90797:CDS | 55.0% | |
| CAGTACCTCATGCAGTTGGC+TGG | - | chr1.4:88113861-88113880 | MS.gene90797:intron | 55.0% | |
| CCCAAAAGCCAGGCTGCTAA+AGG | - | chr1.4:88116084-88116103 | MS.gene90797:intron | 55.0% | |
| CCTTCTCGTATCCGGTAGGT+CGG | - | chr1.4:88115682-88115701 | MS.gene90797:intron | 55.0% | |
| CTCTTGCTGATCCATCTGGG+CGG | - | chr1.4:88117287-88117306 | MS.gene90797:intron | 55.0% | |
| GAACTCAATGGGGGAGGACT+TGG | + | chr1.4:88113606-88113625 | None:intergenic | 55.0% | |
| GACTTAGAGGCGGAAACAGG+AGG | + | chr1.4:88112762-88112781 | None:intergenic | 55.0% | |
| GCCATGGCCCATGAGCAAAA+AGG | + | chr1.4:88117645-88117664 | None:intergenic | 55.0% | |
| GCCCCCACCCATGTATTTAC+GGG | + | chr1.4:88114150-88114169 | None:intergenic | 55.0% | |
| GCTTCTAATTCACCGCCGCA+CGG | - | chr1.4:88118062-88118081 | MS.gene90797:CDS | 55.0% | |
| GGAGCAGGCAAAAACGGGAA+AGG | + | chr1.4:88118243-88118262 | None:intergenic | 55.0% | |
| GGATTTGTGTTGGGGAGTGG+TGG | - | chr1.4:88113027-88113046 | MS.gene90797:intron | 55.0% | |
| GGCAGATGCAGCAACCATCA+TGG | + | chr1.4:88113094-88113113 | None:intergenic | 55.0% | |
| GGTTCACCTGAGACGAGCTT+TGG | + | chr1.4:88112838-88112857 | None:intergenic | 55.0% | |
| GTGGACTTAGAGGCGGAAAC+AGG | + | chr1.4:88112765-88112784 | None:intergenic | 55.0% | |
| GTGTCGTGAGGACTATGCTG+CGG | - | chr1.4:88116869-88116888 | MS.gene90797:intron | 55.0% | |
| TGTCGTGAGGACTATGCTGC+GGG | - | chr1.4:88116870-88116889 | MS.gene90797:intron | 55.0% | |
| TGTGCCAGCCAAACCAACAG+AGG | + | chr1.4:88113891-88113910 | None:intergenic | 55.0% | |
| TTTACTGGGACGGATCCTGC+TGG | + | chr1.4:88115605-88115624 | None:intergenic | 55.0% | |
| ! | CTGGGCATCCTCTGTTGGTT+TGG | - | chr1.4:88113880-88113899 | MS.gene90797:intron | 55.0% |
| ! | GAGATCGGTGGACTTAGAGG+CGG | + | chr1.4:88112772-88112791 | None:intergenic | 55.0% |
| ! | GCCTTTTTGCTCATGGGCCA+TGG | - | chr1.4:88117641-88117660 | MS.gene90797:intron | 55.0% |
| ! | GTGGTTGCAACATCTGGGAC+TGG | - | chr1.4:88113006-88113025 | MS.gene90797:intron | 55.0% |
| ! | TGGGCGGAAAACAGCATTGG+TGG | - | chr1.4:88117303-88117322 | MS.gene90797:intron | 55.0% |
| !! | AGTGTTGGTTATCCGTGCGG+CGG | + | chr1.4:88118077-88118096 | None:intergenic | 55.0% |
| !! | CCCTTTAGCAGCCTGGCTTT+TGG | + | chr1.4:88116088-88116107 | None:intergenic | 55.0% |
| !! | GCATCCTCTGTTGGTTTGGC+TGG | - | chr1.4:88113884-88113903 | MS.gene90797:intron | 55.0% |
| !! | TTCAGATGGGCTGCAGCTTC+TGG | - | chr1.4:88116765-88116784 | MS.gene90797:CDS | 55.0% |
| AAAGGGAATGGCTCCGGCGA+AGG | - | chr1.4:88115059-88115078 | MS.gene90797:intron | 60.0% | |
| AATGGCTCCGGCGAAGGTTG+TGG | - | chr1.4:88115065-88115084 | MS.gene90797:intron | 60.0% | |
| ACATGGGTGGGGGCTGTAGT+CGG | - | chr1.4:88114156-88114175 | MS.gene90797:intron | 60.0% | |
| AGCGAGGGAGATGAGATCGG+TGG | + | chr1.4:88112784-88112803 | None:intergenic | 60.0% | |
| AGTCAAAGGCCACTGCCCTC+AGG | - | chr1.4:88113830-88113849 | MS.gene90797:intron | 60.0% | |
| ATGGCTCCGGCGAAGGTTGT+GGG | - | chr1.4:88115066-88115085 | MS.gene90797:intron | 60.0% | |
| CACAGCCCTACTAGCAACGC+AGG | - | chr1.4:88113907-88113926 | MS.gene90797:intron | 60.0% | |
| CCCCATTGAGTTCCCCTGGA+GGG | - | chr1.4:88113613-88113632 | MS.gene90797:intron | 60.0% | |
| CCCTCCAGGGGAACTCAATG+GGG | + | chr1.4:88113616-88113635 | None:intergenic | 60.0% | |
| CCGACCTACCGGATACGAGA+AGG | + | chr1.4:88115685-88115704 | None:intergenic | 60.0% | |
| CCTCCAGGGGAACTCAATGG+GGG | + | chr1.4:88113615-88113634 | None:intergenic | 60.0% | |
| GAGAAGTCCCCCGCTTTCCA+TGG | + | chr1.4:88113664-88113683 | None:intergenic | 60.0% | |
| GATGCCCAGCCAACTGCATG+AGG | + | chr1.4:88113869-88113888 | None:intergenic | 60.0% | |
| GCCCTTGTGATCCATCCAGC+AGG | - | chr1.4:88115587-88115606 | MS.gene90797:intron | 60.0% | |
| GGATATGCGCGCACGCACAA+AGG | + | chr1.4:88116190-88116209 | None:intergenic | 60.0% | |
| GGTCTACCCACAACCTTCGC+CGG | + | chr1.4:88115075-88115094 | None:intergenic | 60.0% | |
| GTGAGGACTATGCTGCGGGA+GGG | - | chr1.4:88116874-88116893 | MS.gene90797:intron | 60.0% | |
| GTTATGCGTCCTGAGGGCAG+TGG | + | chr1.4:88113842-88113861 | None:intergenic | 60.0% | |
| GTTGGCTGGGCATCCTCTGT+TGG | - | chr1.4:88113875-88113894 | MS.gene90797:intron | 60.0% | |
| TGCCCCCAGGATCCCATTGT+TGG | - | chr1.4:88114961-88114980 | MS.gene90797:intron | 60.0% | |
| ! | CAGGGGGTGTGACTTCAGGA+TGG | - | chr1.4:88117905-88117924 | MS.gene90797:intron | 60.0% |
| !! | TGGGCTTGCTGCTTCCAACC+TGG | - | chr1.4:88114083-88114102 | MS.gene90797:CDS | 60.0% |
| CCAGGGGAACTCAATGGGGG+AGG | + | chr1.4:88113612-88113631 | None:intergenic | 65.0% | |
| CCCCCATTGAGTTCCCCTGG+AGG | - | chr1.4:88113612-88113631 | MS.gene90797:intron | 65.0% | |
| CCTCCCCCATTGAGTTCCCC+TGG | - | chr1.4:88113609-88113628 | MS.gene90797:intron | 65.0% | |
| CGTGAGGACTATGCTGCGGG+AGG | - | chr1.4:88116873-88116892 | MS.gene90797:intron | 65.0% | |
| CTGGGACGGATCCTGCTGGA+TGG | + | chr1.4:88115601-88115620 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 88112609 | 88118281 | 88112609 | ID=MS.gene90797 |
| chr1.4 | mRNA | 88112609 | 88118281 | 88112609 | ID=MS.gene90797.t1;Parent=MS.gene90797 |
| chr1.4 | exon | 88118040 | 88118281 | 88118040 | ID=MS.gene90797.t1.exon1;Parent=MS.gene90797.t1 |
| chr1.4 | CDS | 88118040 | 88118281 | 88118040 | ID=cds.MS.gene90797.t1;Parent=MS.gene90797.t1 |
| chr1.4 | exon | 88117762 | 88117891 | 88117762 | ID=MS.gene90797.t1.exon2;Parent=MS.gene90797.t1 |
| chr1.4 | CDS | 88117762 | 88117891 | 88117762 | ID=cds.MS.gene90797.t1;Parent=MS.gene90797.t1 |
| chr1.4 | exon | 88116962 | 88117099 | 88116962 | ID=MS.gene90797.t1.exon3;Parent=MS.gene90797.t1 |
| chr1.4 | CDS | 88116962 | 88117099 | 88116962 | ID=cds.MS.gene90797.t1;Parent=MS.gene90797.t1 |
| chr1.4 | exon | 88116691 | 88116824 | 88116691 | ID=MS.gene90797.t1.exon4;Parent=MS.gene90797.t1 |
| chr1.4 | CDS | 88116691 | 88116824 | 88116691 | ID=cds.MS.gene90797.t1;Parent=MS.gene90797.t1 |
| chr1.4 | exon | 88113995 | 88114120 | 88113995 | ID=MS.gene90797.t1.exon5;Parent=MS.gene90797.t1 |
| chr1.4 | CDS | 88113995 | 88114120 | 88113995 | ID=cds.MS.gene90797.t1;Parent=MS.gene90797.t1 |
| chr1.4 | exon | 88113514 | 88113617 | 88113514 | ID=MS.gene90797.t1.exon6;Parent=MS.gene90797.t1 |
| chr1.4 | CDS | 88113514 | 88113617 | 88113514 | ID=cds.MS.gene90797.t1;Parent=MS.gene90797.t1 |
| chr1.4 | exon | 88112609 | 88112982 | 88112609 | ID=MS.gene90797.t1.exon7;Parent=MS.gene90797.t1 |
| chr1.4 | CDS | 88112609 | 88112982 | 88112609 | ID=cds.MS.gene90797.t1;Parent=MS.gene90797.t1 |
| Gene Sequence |
| Protein sequence |
