AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90811

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90811.t1 MTR_1g115790 98.677 756 8 2 1 756 1 754 0.0 1519
MS.gene90811.t1 MTR_7g100120 70.485 742 195 7 18 755 28 749 0.0 1035
MS.gene90811.t1 MTR_5g030910 39.525 716 313 12 122 756 51 727 6.69e-144 439
MS.gene90811.t1 MTR_8g093840 33.478 690 398 11 62 747 1 633 9.25e-122 379
MS.gene90811.t1 MTR_2g078080 33.724 682 360 11 77 747 4 604 7.28e-121 376
MS.gene90811.t1 MTR_3g096410 34.494 632 356 8 120 747 56 633 3.06e-119 373
MS.gene90811.t1 MTR_4g116540 33.726 679 359 13 74 747 42 634 5.73e-114 359
MS.gene90811.t1 MTR_1g099570 31.654 635 354 10 117 748 45 602 1.60e-100 323
MS.gene90811.t1 MTR_8g107450 49.538 325 142 3 54 376 19 323 8.41e-95 313
MS.gene90811.t1 MTR_8g107450 38.413 315 178 5 442 755 517 816 4.53e-57 209
MS.gene90811.t1 MTR_1g096580 28.959 701 434 13 54 747 21 664 5.74e-82 275
MS.gene90811.t1 MTR_1g054935 31.217 567 359 10 117 673 4 549 4.83e-79 265
MS.gene90811.t1 MTR_1g054935 30.179 613 373 11 71 673 144 711 1.93e-78 267
MS.gene90811.t1 MTR_6g066240 32.721 544 343 7 122 662 66 589 3.19e-77 263
MS.gene90811.t1 MTR_4g094010 29.205 654 383 15 117 754 45 634 1.49e-76 260
MS.gene90811.t1 MTR_5g025470 30.519 616 370 12 73 682 44 607 2.80e-76 259
MS.gene90811.t1 MTR_4g094050 28.261 644 396 12 119 754 70 655 2.91e-75 258
MS.gene90811.t1 MTR_4g094060 30.292 548 350 9 119 660 70 591 1.38e-74 255
MS.gene90811.t1 MTR_1g054960 30.303 561 359 8 120 673 21 556 2.69e-74 252
MS.gene90811.t1 MTR_1g093990 30.016 613 379 17 57 661 37 607 4.95e-74 253
MS.gene90811.t1 MTR_4g076900 32.090 536 342 8 119 650 26 543 1.17e-73 253
MS.gene90811.t1 MTR_4g076940 32.210 534 344 6 119 650 50 567 6.34e-73 251
MS.gene90811.t1 MTR_4g076970 30.912 537 349 8 118 650 47 565 9.66e-73 251
MS.gene90811.t1 MTR_2g079980 30.797 552 343 10 118 666 27 542 1.71e-72 248
MS.gene90811.t1 MTR_4g076940 32.210 534 344 6 119 650 90 607 1.90e-72 251
MS.gene90811.t1 MTR_7g106880 31.171 555 348 10 119 661 6 538 7.56e-72 245
MS.gene90811.t1 MTR_7g106880 29.900 602 364 11 71 660 133 688 2.63e-71 248
MS.gene90811.t1 MTR_4g094090 29.636 550 347 10 120 660 29 547 5.74e-68 236
MS.gene90811.t1 MTR_8g059150 28.707 634 384 15 44 666 2 578 2.53e-65 229
MS.gene90811.t1 MTR_1g108340 27.580 562 363 8 120 676 91 613 5.40e-62 221
MS.gene90811.t1 MTR_1g108340 27.580 562 363 8 120 676 91 613 6.48e-62 221
MS.gene90811.t1 MTR_4g054020 29.365 504 322 9 164 660 13 489 2.08e-61 217
MS.gene90811.t1 MTR_5g096390 30.217 599 374 18 72 661 63 626 1.60e-59 214
MS.gene90811.t1 MTR_7g104130 25.932 644 417 16 39 662 794 1397 9.30e-59 217
MS.gene90811.t1 MTR_7g104130 27.407 270 163 4 118 354 180 449 2.49e-26 116
MS.gene90811.t1 MTR_4g076940 30.000 490 326 5 162 650 1 474 1.32e-58 209
MS.gene90811.t1 MTR_7g104110 25.234 642 392 12 52 662 805 1389 2.42e-57 213
MS.gene90811.t1 MTR_7g104110 23.786 597 362 14 118 662 174 729 1.60e-35 145
MS.gene90811.t1 MTR_3g463680 24.877 611 388 11 65 662 805 1357 3.11e-57 212
MS.gene90811.t1 MTR_3g463680 25.043 583 367 12 118 660 164 716 1.86e-36 148
MS.gene90811.t1 MTR_4g011640 24.342 608 393 10 66 662 826 1377 1.25e-56 211
MS.gene90811.t1 MTR_4g011640 24.361 587 375 15 114 660 163 720 6.65e-31 131
MS.gene90811.t1 MTR_7g098780 24.046 603 392 10 72 662 811 1359 7.10e-56 208
MS.gene90811.t1 MTR_7g098780 25.850 588 349 12 122 660 175 724 2.13e-38 154
MS.gene90811.t1 MTR_1g050525 24.098 610 394 10 65 662 856 1408 8.29e-56 208
MS.gene90811.t1 MTR_1g050525 22.789 588 379 11 118 662 172 727 4.32e-32 134
MS.gene90811.t1 MTR_4g093845 27.273 572 374 11 118 676 55 597 8.93e-56 202
MS.gene90811.t1 MTR_4g011630 22.913 611 404 7 66 665 829 1383 3.52e-55 206
MS.gene90811.t1 MTR_4g011630 24.573 586 375 12 114 660 165 722 8.48e-33 137
MS.gene90811.t1 MTR_2g102670 24.262 610 393 10 65 662 800 1352 3.94e-55 206
MS.gene90811.t1 MTR_2g102670 22.526 586 361 12 118 660 163 698 2.70e-30 129
MS.gene90811.t1 MTR_2g102640 24.165 629 408 10 46 662 801 1372 5.74e-55 206
MS.gene90811.t1 MTR_2g102640 24.618 589 363 14 118 660 163 716 1.61e-37 152
MS.gene90811.t1 MTR_7g104150 23.810 609 395 11 66 662 846 1397 7.25e-55 205
MS.gene90811.t1 MTR_7g104150 21.926 675 419 15 118 747 180 791 5.13e-32 134
MS.gene90811.t1 MTR_2g102660 24.138 609 395 9 65 662 817 1369 2.11e-54 204
MS.gene90811.t1 MTR_2g102660 24.660 588 364 12 118 660 163 716 4.13e-40 160
MS.gene90811.t1 MTR_5g070320 24.510 612 393 13 63 662 627 1181 6.06e-54 202
MS.gene90811.t1 MTR_5g070320 22.284 543 343 9 164 661 21 529 2.22e-33 139
MS.gene90811.t1 MTR_2g101090 25.616 609 384 12 66 662 834 1385 2.34e-53 201
MS.gene90811.t1 MTR_2g101090 22.411 531 358 8 161 659 199 707 3.89e-31 132
MS.gene90811.t1 MTR_8g014360 24.712 607 392 10 66 662 868 1419 6.74e-53 199
MS.gene90811.t1 MTR_8g014360 24.721 627 396 14 82 659 127 726 2.41e-45 176
MS.gene90811.t1 MTR_7g104130 26.059 614 394 16 39 632 794 1367 8.72e-53 199
MS.gene90811.t1 MTR_7g104130 27.407 270 163 4 118 354 180 449 3.68e-26 115
MS.gene90811.t1 MTR_5g070320 25.801 624 370 17 63 662 818 1372 1.59e-52 198
MS.gene90811.t1 MTR_5g070320 23.729 590 370 11 118 661 165 720 4.35e-42 166
MS.gene90811.t1 MTR_7g098750 24.590 610 389 12 66 662 576 1127 1.72e-52 197
MS.gene90811.t1 MTR_7g098750 20.796 452 323 8 216 660 18 441 6.39e-23 105
MS.gene90811.t1 MTR_5g070320 25.801 624 370 17 63 662 531 1085 1.95e-52 197
MS.gene90811.t1 MTR_5g070320 22.246 463 313 8 212 661 5 433 2.36e-28 122
MS.gene90811.t1 MTR_7g098750 24.590 610 389 12 66 662 846 1397 2.23e-52 197
MS.gene90811.t1 MTR_7g098750 22.491 578 381 11 122 660 162 711 5.79e-35 144
MS.gene90811.t1 MTR_7g098760 23.802 626 418 12 42 662 823 1394 1.24e-51 195
MS.gene90811.t1 MTR_7g098760 22.049 576 386 8 122 660 162 711 6.95e-35 143
MS.gene90811.t1 MTR_1g492950 24.955 553 365 9 122 662 894 1408 1.77e-51 195
MS.gene90811.t1 MTR_1g492950 23.339 587 369 12 122 662 189 740 9.40e-32 134
MS.gene90811.t1 MTR_4g011620 23.645 609 396 8 66 662 819 1370 2.27e-51 194
MS.gene90811.t1 MTR_4g011620 25.477 577 365 13 122 660 161 710 1.04e-39 159
MS.gene90811.t1 MTR_3g040670 42.917 240 131 5 142 378 201 437 1.42e-50 183
MS.gene90811.t1 MTR_7g098740 24.247 631 406 14 46 665 789 1358 3.78e-50 191
MS.gene90811.t1 MTR_7g098740 22.491 578 381 11 122 660 162 711 1.09e-34 143
MS.gene90811.t1 MTR_1g011650 23.263 619 408 10 66 673 840 1402 5.00e-50 190
MS.gene90811.t1 MTR_1g011650 23.752 581 370 13 122 660 166 715 9.49e-32 134
MS.gene90811.t1 MTR_7g104100 23.229 607 401 11 66 662 844 1395 1.05e-49 189
MS.gene90811.t1 MTR_7g104100 22.881 590 368 16 122 662 182 733 2.60e-35 145
MS.gene90811.t1 MTR_4g123850 23.256 559 373 6 122 665 858 1375 1.13e-49 189
MS.gene90811.t1 MTR_4g123850 22.997 574 382 9 122 660 168 716 2.46e-37 151
MS.gene90811.t1 MTR_3g107870 24.437 622 400 11 53 662 841 1404 1.28e-49 189
MS.gene90811.t1 MTR_3g107870 23.826 575 377 9 122 660 166 715 5.35e-39 156
MS.gene90811.t1 MTR_1g094660 37.891 256 157 2 118 372 513 767 2.25e-49 188
MS.gene90811.t1 MTR_1g094660 37.891 256 157 2 118 372 513 767 3.71e-49 187
MS.gene90811.t1 MTR_1g011640 23.645 609 394 11 65 660 816 1366 3.69e-48 185
MS.gene90811.t1 MTR_1g011640 30.827 266 151 5 122 354 154 419 1.04e-23 108
MS.gene90811.t1 MTR_7g098800 23.065 646 416 11 50 673 743 1329 5.39e-48 184
MS.gene90811.t1 MTR_7g098800 24.870 575 371 7 122 660 133 682 2.21e-41 164
MS.gene90811.t1 MTR_7g098370 21.987 614 406 10 66 665 804 1358 1.53e-47 183
MS.gene90811.t1 MTR_7g098370 23.010 578 378 14 122 660 162 711 1.06e-33 140
MS.gene90811.t1 MTR_7g098320 22.095 611 411 10 65 665 837 1392 2.27e-47 182
MS.gene90811.t1 MTR_7g098320 23.570 577 376 12 122 660 158 707 1.17e-35 146
MS.gene90811.t1 MTR_4g113070 24.677 620 384 18 65 665 806 1361 2.68e-47 182
MS.gene90811.t1 MTR_4g113070 23.590 585 375 12 118 660 145 699 8.87e-34 140
MS.gene90811.t1 MTR_7g098750 24.655 580 366 12 66 632 846 1367 3.13e-46 179
MS.gene90811.t1 MTR_7g098750 22.491 578 381 11 122 660 162 711 5.22e-35 144
MS.gene90811.t1 MTR_7g101780 31.016 374 211 7 8 368 422 761 1.08e-45 177
MS.gene90811.t1 MTR_8g014360 24.721 627 396 14 82 659 127 726 2.13e-45 176
MS.gene90811.t1 MTR_8g014360 25.152 493 304 10 66 548 868 1305 1.62e-38 155
MS.gene90811.t1 MTR_7g098300 23.241 611 400 13 65 665 841 1392 3.62e-45 176
MS.gene90811.t1 MTR_7g098300 23.224 577 378 12 122 660 162 711 6.24e-35 144
MS.gene90811.t1 MTR_1g063920 35.764 288 177 4 79 362 451 734 3.08e-43 169
MS.gene90811.t1 MTR_2g095390 26.259 556 348 16 127 660 131 646 3.65e-42 164
MS.gene90811.t1 MTR_4g058000 33.067 375 225 8 80 452 468 818 3.91e-41 162
MS.gene90811.t1 MTR_7g098890 22.419 620 385 14 66 660 747 1295 4.09e-40 160
MS.gene90811.t1 MTR_7g098890 24.077 569 357 18 122 661 136 658 4.68e-25 112
MS.gene90811.t1 MTR_7g098320 23.077 494 317 8 65 549 837 1276 1.67e-36 148
MS.gene90811.t1 MTR_7g098320 23.570 577 376 12 122 660 158 707 8.43e-36 146
MS.gene90811.t1 MTR_8g103450 25.993 277 142 5 47 306 177 407 1.91e-23 103
MS.gene90811.t1 MTR_7g407080 20.565 496 311 11 167 648 153 579 1.63e-22 102
MS.gene90811.t1 MTR_7g060570 26.549 226 127 4 133 358 939 1125 2.26e-17 87.4
MS.gene90811.t1 MTR_7g091350 47.500 80 42 0 247 326 81 160 4.99e-17 79.3
MS.gene90811.t1 MTR_3g086430 28.899 218 143 8 120 334 1016 1224 3.33e-15 80.5
MS.gene90811.t1 MTR_4g089130 44.737 76 42 0 246 321 8 83 3.46e-15 72.0
MS.gene90811.t1 MTR_7g033710 29.279 222 135 11 122 334 442 650 3.90e-15 79.7
MS.gene90811.t1 MTR_3g437870 27.189 217 146 4 120 334 635 841 4.60e-15 80.1
MS.gene90811.t1 MTR_6g011680 30.594 219 140 9 121 336 1024 1233 5.30e-15 80.1
MS.gene90811.t1 MTR_1567s0010 27.306 271 159 10 74 324 183 435 6.77e-15 78.2
MS.gene90811.t1 MTR_1g086150 25.253 297 185 9 120 413 399 661 9.51e-15 79.0
MS.gene90811.t1 MTR_1g086080 25.926 297 183 9 120 413 404 666 1.01e-14 79.0
MS.gene90811.t1 MTR_7g091380 27.232 224 148 6 120 339 1274 1486 1.11e-14 79.0
MS.gene90811.t1 MTR_7g091380 31.677 161 98 4 123 281 371 521 5.13e-14 77.0
MS.gene90811.t1 MTR_7g091380 27.232 224 148 6 120 339 1294 1506 1.26e-14 79.0
MS.gene90811.t1 MTR_7g091380 31.677 161 98 4 123 281 391 541 5.18e-14 76.6
MS.gene90811.t1 MTR_7g091380 27.232 224 148 6 120 339 1476 1688 1.31e-14 79.0
MS.gene90811.t1 MTR_7g091380 31.677 161 98 4 123 281 573 723 5.34e-14 76.6
MS.gene90811.t1 MTR_7g091380 27.232 224 148 6 120 339 1476 1688 1.32e-14 79.0
MS.gene90811.t1 MTR_7g091380 31.677 161 98 4 123 281 573 723 4.73e-14 77.0
MS.gene90811.t1 MTR_6g008820 31.731 208 129 9 133 336 817 1015 1.98e-14 77.8
MS.gene90811.t1 MTR_6g008820 31.731 208 129 9 133 336 1031 1229 2.07e-14 78.2
MS.gene90811.t1 MTR_6g008820 27.119 236 151 8 111 334 346 572 1.97e-11 68.2
MS.gene90811.t1 MTR_6g009150 33.493 209 125 10 133 336 1045 1244 2.20e-14 77.8
MS.gene90811.t1 MTR_6g009150 28.431 204 128 7 111 302 359 556 6.52e-11 66.6
MS.gene90811.t1 MTR_6g008820 31.731 208 129 9 133 336 901 1099 2.22e-14 77.8
MS.gene90811.t1 MTR_6g008820 27.119 236 151 8 111 334 216 442 2.10e-11 68.2
MS.gene90811.t1 MTR_6g008820 31.731 208 129 9 133 336 709 907 2.67e-14 77.4
MS.gene90811.t1 MTR_6g008820 27.119 236 151 8 111 334 24 250 2.86e-11 67.8
MS.gene90811.t1 MTR_6g088670 30.909 220 140 8 118 334 372 582 7.04e-14 76.3
MS.gene90811.t1 MTR_6g088670 29.204 226 140 10 129 345 1026 1240 3.44e-13 73.9
MS.gene90811.t1 MTR_6g009030 33.014 209 126 10 133 336 1027 1226 9.28e-14 75.9
MS.gene90811.t1 MTR_6g009030 26.087 299 193 11 111 390 358 647 6.23e-12 70.1
MS.gene90811.t1 MTR_6g009080 32.536 209 127 10 133 336 241 440 1.66e-13 73.9
MS.gene90811.t1 MTR_4g081190 29.469 207 134 8 133 336 1018 1215 1.75e-13 75.1
MS.gene90811.t1 MTR_4g081190 29.268 205 133 7 133 334 371 566 2.10e-12 71.6
MS.gene90811.t1 MTR_6g009200 32.057 209 128 9 133 336 1048 1247 1.91e-13 74.7
MS.gene90811.t1 MTR_6g009200 27.966 236 149 9 111 334 358 584 3.06e-11 67.8
MS.gene90811.t1 MTR_0019s0020 28.634 227 143 6 119 345 585 792 2.43e-13 74.3
MS.gene90811.t1 MTR_0019s0020 28.634 227 143 6 119 345 585 792 2.44e-13 74.3
MS.gene90811.t1 MTR_6g008800 32.394 213 130 10 129 336 1031 1234 2.80e-13 74.3
MS.gene90811.t1 MTR_6g008800 27.966 236 149 9 111 334 358 584 2.97e-11 67.8
MS.gene90811.t1 MTR_0019s0020 28.634 227 143 6 119 345 585 792 3.49e-13 73.9
MS.gene90811.t1 MTR_0019s0020 28.634 227 143 6 119 345 585 792 3.73e-13 73.9
MS.gene90811.t1 MTR_0019s0020 28.634 227 143 6 119 345 585 792 4.22e-13 73.9
MS.gene90811.t1 MTR_7g079540 28.139 231 136 7 120 329 98 319 5.12e-13 71.6
MS.gene90811.t1 MTR_4g124000 25.000 340 219 13 120 449 393 706 7.61e-13 72.8
MS.gene90811.t1 MTR_6g009070 31.579 209 129 10 133 336 962 1161 8.18e-13 72.8
MS.gene90811.t1 MTR_4g123990 27.982 218 145 7 120 334 393 601 1.10e-12 72.4
MS.gene90811.t1 MTR_1g088680 25.292 257 167 8 123 378 668 900 1.16e-12 72.4
MS.gene90811.t1 MTR_4g108240 26.316 209 142 5 133 339 643 841 1.21e-12 72.0
MS.gene90811.t1 MTR_4g124000 27.149 221 149 7 120 337 393 604 1.25e-12 72.4
MS.gene90811.t1 MTR_6g009110 31.100 209 130 9 133 336 1046 1245 1.28e-12 72.0
MS.gene90811.t1 MTR_6g009110 31.053 190 121 7 121 307 384 566 1.71e-11 68.6
MS.gene90811.t1 MTR_7g051100 30.000 190 123 7 121 307 373 555 1.68e-12 71.6
MS.gene90811.t1 MTR_3g099990 27.619 210 136 6 134 339 556 753 1.71e-12 71.6
MS.gene90811.t1 MTR_3g080220 30.244 205 131 7 133 334 423 618 1.78e-12 71.6
MS.gene90811.t1 MTR_4g108170 26.316 209 142 5 133 339 628 826 2.31e-12 71.2
MS.gene90811.t1 MTR_4g108153 27.451 204 136 6 133 334 601 794 2.77e-12 70.9
MS.gene90811.t1 MTR_4g124040 28.899 218 143 8 120 334 443 651 2.80e-12 71.2
MS.gene90811.t1 MTR_4g124040 28.899 218 143 8 120 334 211 419 2.80e-12 70.9
MS.gene90811.t1 MTR_4g124040 28.899 218 143 8 120 334 388 596 3.25e-12 70.9
MS.gene90811.t1 MTR_4g108163 26.961 204 137 5 133 334 631 824 3.93e-12 70.5
MS.gene90811.t1 MTR_8g022270 26.829 246 153 10 121 350 614 848 5.59e-12 70.1
MS.gene90811.t1 MTR_4g124050 27.397 219 147 7 119 334 410 619 6.25e-12 69.7
MS.gene90811.t1 MTR_3g093430 26.244 221 149 8 122 334 1014 1228 6.89e-12 69.7
MS.gene90811.t1 MTR_3g093430 29.358 218 142 8 120 334 379 587 9.13e-11 66.2
MS.gene90811.t1 MTR_4g124050 28.054 221 143 8 119 334 410 619 9.96e-12 69.3
MS.gene90811.t1 MTR_4g077930 27.982 218 145 7 120 334 391 599 1.20e-11 68.9
MS.gene90811.t1 MTR_4g109720 28.054 221 140 10 121 334 403 611 1.20e-11 68.6
MS.gene90811.t1 MTR_2g436730 26.106 226 146 7 131 355 665 870 1.54e-11 68.6
MS.gene90811.t1 MTR_5g033080 30.476 210 125 10 134 334 485 682 1.79e-11 68.2
MS.gene90811.t1 MTR_7g102070 30.460 174 112 6 121 291 442 609 2.20e-11 68.2
MS.gene90811.t1 MTR_4g077930 27.982 218 145 7 120 334 282 490 2.23e-11 68.2
MS.gene90811.t1 MTR_3g107800 26.027 219 150 7 119 334 410 619 2.27e-11 68.2
MS.gene90811.t1 MTR_4g108240 27.746 173 115 3 133 303 643 807 2.41e-11 67.8
MS.gene90811.t1 MTR_4g077930 28.986 207 135 7 131 334 402 599 2.43e-11 68.2
MS.gene90811.t1 MTR_6g078080 27.536 207 134 8 133 334 393 588 2.78e-11 67.8
MS.gene90811.t1 MTR_5g033080 30.476 210 125 10 134 334 310 507 2.95e-11 67.0
MS.gene90811.t1 MTR_5g029750 28.571 217 143 7 121 334 1005 1212 3.36e-11 67.4
MS.gene90811.t1 MTR_5g029750 28.986 207 135 8 133 336 384 581 7.05e-11 66.6
MS.gene90811.t1 MTR_1g063170 30.159 189 122 7 122 307 1072 1253 3.72e-11 67.4
MS.gene90811.t1 MTR_1g063170 30.636 173 111 6 122 291 416 582 4.73e-11 67.0
MS.gene90811.t1 MTR_2g018530 27.313 227 150 9 133 353 397 614 3.81e-11 67.4
MS.gene90811.t1 MTR_1g025560 31.461 178 112 7 133 307 1022 1192 4.45e-11 67.0
MS.gene90811.t1 MTR_2g018320 28.293 205 135 7 133 334 387 582 4.55e-11 67.0
MS.gene90811.t1 MTR_6g084320 22.897 214 143 4 123 334 604 797 6.03e-11 66.6
MS.gene90811.t1 MTR_6g084320 22.897 214 143 4 123 334 604 797 7.69e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90811.t1 AT2G39350 72.259 757 187 7 3 755 2 739 0.0 1092
MS.gene90811.t1 AT3G55090 70.604 762 187 6 3 755 2 735 0.0 1073
MS.gene90811.t1 AT5G13580 72.853 722 169 6 34 755 32 726 0.0 1026
MS.gene90811.t1 AT2G37360 65.526 760 227 8 8 755 18 754 0.0 990
MS.gene90811.t1 AT3G53510 71.095 685 163 4 74 755 86 738 0.0 949
MS.gene90811.t1 AT3G55110 63.462 728 227 8 31 756 18 708 0.0 932
MS.gene90811.t1 AT3G55130 61.591 729 244 7 33 756 28 725 0.0 907
MS.gene90811.t1 AT3G55100 62.590 695 220 5 62 756 8 662 0.0 886
MS.gene90811.t1 AT3G55100 62.590 695 220 5 62 756 8 662 0.0 886
MS.gene90811.t1 AT2G13610 35.053 659 364 10 99 747 31 635 3.37e-125 389
MS.gene90811.t1 AT1G53270 37.226 548 285 8 120 660 48 543 1.10e-115 362
MS.gene90811.t1 AT4G25750 32.591 629 333 12 122 748 30 569 2.55e-102 326
MS.gene90811.t1 AT5G19410 32.967 637 331 13 122 748 66 616 5.57e-101 324
MS.gene90811.t1 AT5G19410 32.967 637 331 13 122 748 75 625 5.71e-101 325
MS.gene90811.t1 AT5G52860 31.905 630 334 11 122 748 44 581 4.12e-99 318
MS.gene90811.t1 AT4G27420 30.929 624 356 13 55 661 11 576 1.87e-83 278
MS.gene90811.t1 AT3G25620 31.290 620 373 16 57 666 49 625 1.45e-81 274
MS.gene90811.t1 AT1G17840 32.787 549 336 7 122 662 69 592 5.96e-77 262
MS.gene90811.t1 AT5G06530 30.378 609 382 11 71 676 152 721 6.64e-77 263
MS.gene90811.t1 AT5G06530 30.378 609 382 11 71 676 152 721 6.64e-77 263
MS.gene90811.t1 AT2G01320 29.821 560 356 8 108 661 76 604 3.32e-76 259
MS.gene90811.t1 AT2G01320 29.821 560 356 8 108 661 76 604 3.32e-76 259
MS.gene90811.t1 AT1G71960 29.179 682 419 14 71 747 35 657 5.27e-76 259
MS.gene90811.t1 AT2G01320 29.821 560 356 8 108 661 76 604 1.46e-75 259
MS.gene90811.t1 AT2G01320 29.821 560 356 8 108 661 76 604 1.51e-75 259
MS.gene90811.t1 AT2G01320 29.821 560 356 8 108 661 76 604 1.51e-75 259
MS.gene90811.t1 AT2G01320 29.821 560 356 8 108 661 76 604 1.57e-75 259
MS.gene90811.t1 AT1G31770 30.096 628 382 13 43 662 14 592 1.84e-75 257
MS.gene90811.t1 AT3G21090 31.159 552 349 8 119 660 42 572 8.20e-74 253
MS.gene90811.t1 AT5G06530 30.674 564 353 8 71 631 152 680 7.61e-72 248
MS.gene90811.t1 AT1G51500 31.703 552 348 8 119 660 41 573 1.01e-71 248
MS.gene90811.t1 AT1G51460 30.896 547 361 9 109 650 20 554 1.68e-68 239
MS.gene90811.t1 AT5G06530 31.313 495 328 6 139 631 1 485 2.86e-67 231
MS.gene90811.t1 AT2G01320 31.513 476 271 10 108 568 76 511 2.21e-64 224
MS.gene90811.t1 AT2G01320 31.513 476 271 10 108 568 76 511 2.21e-64 224
MS.gene90811.t1 AT2G29940 27.258 609 376 14 65 662 815 1367 4.27e-63 230
MS.gene90811.t1 AT2G29940 24.740 578 371 8 122 661 175 726 7.81e-43 168
MS.gene90811.t1 AT3G25620 33.787 441 246 12 57 490 49 450 9.96e-62 215
MS.gene90811.t1 AT4G15230 26.241 564 368 9 113 665 818 1344 9.58e-61 223
MS.gene90811.t1 AT4G15230 24.048 578 371 14 122 660 156 704 2.37e-39 157
MS.gene90811.t1 AT4G15230 26.241 564 368 9 113 665 818 1344 9.58e-61 223
MS.gene90811.t1 AT4G15230 24.048 578 371 14 122 660 156 704 2.37e-39 157
MS.gene90811.t1 AT4G15230 26.241 564 368 9 113 665 739 1265 1.00e-60 223
MS.gene90811.t1 AT4G15230 24.048 578 371 14 122 660 77 625 2.19e-39 157
MS.gene90811.t1 AT3G13220 28.642 604 387 15 67 661 56 624 8.95e-60 214
MS.gene90811.t1 AT4G15236 26.512 562 369 8 113 665 808 1334 3.54e-58 215
MS.gene90811.t1 AT4G15236 22.068 793 476 18 16 756 62 764 1.57e-36 149
MS.gene90811.t1 AT1G15210 25.074 678 423 13 38 701 802 1408 4.64e-58 215
MS.gene90811.t1 AT1G15210 25.078 638 382 16 82 660 133 733 5.84e-40 159
MS.gene90811.t1 AT1G59870 24.013 633 412 11 65 687 856 1429 1.11e-57 214
MS.gene90811.t1 AT1G59870 23.040 625 409 11 82 659 135 734 2.14e-41 164
MS.gene90811.t1 AT3G16340 23.002 613 406 11 61 662 793 1350 7.32e-57 211
MS.gene90811.t1 AT3G16340 24.055 582 360 12 122 659 162 705 4.78e-40 160
MS.gene90811.t1 AT3G16340 23.002 613 406 11 61 662 798 1355 1.04e-56 211
MS.gene90811.t1 AT3G16340 24.227 582 364 11 122 659 162 710 1.11e-41 165
MS.gene90811.t1 AT3G53480 23.622 635 401 13 45 662 824 1391 1.39e-56 210
MS.gene90811.t1 AT3G53480 23.630 584 366 13 122 660 189 737 1.96e-37 151
MS.gene90811.t1 AT2G37280 23.383 603 391 11 73 662 810 1354 2.84e-56 209
MS.gene90811.t1 AT2G37280 22.261 575 385 8 122 660 154 702 3.57e-37 150
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 808 1334 3.09e-56 209
MS.gene90811.t1 AT4G15215 23.043 690 435 18 16 660 56 694 4.93e-36 147
MS.gene90811.t1 AT2G37280 23.549 603 390 11 73 662 839 1383 3.56e-56 209
MS.gene90811.t1 AT2G37280 21.026 604 386 8 122 660 154 731 4.38e-33 138
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 805 1331 3.74e-56 209
MS.gene90811.t1 AT4G15215 23.043 690 435 18 16 660 53 691 5.42e-36 147
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 805 1331 3.74e-56 209
MS.gene90811.t1 AT4G15215 23.043 690 435 18 16 660 53 691 5.42e-36 147
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 805 1331 3.74e-56 209
MS.gene90811.t1 AT4G15215 23.043 690 435 18 16 660 53 691 5.42e-36 147
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 805 1331 3.74e-56 209
MS.gene90811.t1 AT4G15215 23.043 690 435 18 16 660 53 691 5.42e-36 147
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 815 1341 3.77e-56 209
MS.gene90811.t1 AT4G15215 23.188 690 441 17 16 660 56 701 3.20e-38 154
MS.gene90811.t1 AT2G37280 23.333 600 395 9 73 662 652 1196 4.35e-56 209
MS.gene90811.t1 AT2G37280 22.043 558 373 8 139 660 13 544 3.46e-34 141
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 812 1338 4.68e-56 209
MS.gene90811.t1 AT4G15215 23.188 690 441 17 16 660 53 698 3.08e-38 154
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 812 1338 4.68e-56 209
MS.gene90811.t1 AT4G15215 23.188 690 441 17 16 660 53 698 3.08e-38 154
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 812 1338 4.68e-56 209
MS.gene90811.t1 AT4G15215 23.188 690 441 17 16 660 53 698 3.08e-38 154
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 812 1338 4.68e-56 209
MS.gene90811.t1 AT4G15215 23.188 690 441 17 16 660 53 698 3.08e-38 154
MS.gene90811.t1 AT4G15215 25.089 562 377 7 113 665 812 1338 4.68e-56 209
MS.gene90811.t1 AT4G15215 23.188 690 441 17 16 660 53 698 3.08e-38 154
MS.gene90811.t1 AT4G15233 24.293 601 400 8 77 665 770 1327 1.63e-55 207
MS.gene90811.t1 AT4G15233 23.177 617 390 13 93 660 113 694 1.04e-36 149
MS.gene90811.t1 AT4G15233 24.293 601 400 8 77 665 761 1318 1.76e-55 207
MS.gene90811.t1 AT4G15233 23.759 564 372 11 122 660 155 685 2.38e-40 160
MS.gene90811.t1 AT4G15233 24.293 601 400 8 77 665 779 1336 1.91e-55 207
MS.gene90811.t1 AT4G15233 23.196 582 371 11 122 660 155 703 1.35e-38 155
MS.gene90811.t1 AT4G15233 24.207 599 399 8 79 665 719 1274 2.18e-55 207
MS.gene90811.t1 AT4G15233 23.196 582 371 11 122 660 93 641 1.66e-38 155
MS.gene90811.t1 AT4G15233 24.207 599 399 8 79 665 719 1274 2.18e-55 207
MS.gene90811.t1 AT4G15233 23.196 582 371 11 122 660 93 641 1.66e-38 155
MS.gene90811.t1 AT1G66950 24.587 606 394 10 66 662 843 1394 9.10e-55 205
MS.gene90811.t1 AT1G66950 23.786 597 363 15 118 662 185 741 5.39e-33 137
MS.gene90811.t1 AT2G36380 24.877 611 388 12 65 662 841 1393 2.57e-54 204
MS.gene90811.t1 AT2G36380 23.920 602 347 18 122 662 188 739 1.48e-35 145
MS.gene90811.t1 AT2G26910 24.508 661 415 15 19 665 772 1362 7.82e-54 202
MS.gene90811.t1 AT2G26910 23.711 582 378 13 118 660 145 699 2.46e-33 139
MS.gene90811.t1 AT1G15520 22.862 608 402 7 66 662 815 1366 1.10e-53 202
MS.gene90811.t1 AT1G15520 21.575 584 379 10 122 660 169 718 2.70e-36 148
MS.gene90811.t1 AT4G15233 24.725 546 363 6 131 665 685 1193 1.63e-53 201
MS.gene90811.t1 AT4G15233 23.759 564 372 11 122 660 93 623 3.01e-40 160
MS.gene90811.t1 AT4G15233 24.725 546 363 6 131 665 685 1193 1.63e-53 201
MS.gene90811.t1 AT4G15233 23.759 564 372 11 122 660 93 623 3.01e-40 160
MS.gene90811.t1 AT4G15233 23.680 625 398 10 77 665 779 1360 1.90e-51 195
MS.gene90811.t1 AT4G15233 23.196 582 371 11 122 660 155 703 9.52e-39 155
MS.gene90811.t1 AT4G15230 25.933 536 348 10 113 636 818 1316 2.02e-51 194
MS.gene90811.t1 AT4G15230 24.048 578 371 14 122 660 156 704 2.02e-39 157
MS.gene90811.t1 AT3G30842 26.351 592 355 15 73 646 818 1346 3.64e-49 188
MS.gene90811.t1 AT3G30842 22.866 656 401 13 122 721 161 767 6.01e-39 156
MS.gene90811.t1 AT2G37280 23.560 573 367 11 73 632 810 1324 1.40e-48 186
MS.gene90811.t1 AT2G37280 22.261 575 385 8 122 660 154 702 4.90e-37 150
MS.gene90811.t1 AT1G53390 37.762 286 171 4 80 364 484 763 1.72e-48 185
MS.gene90811.t1 AT2G37010 26.891 595 372 17 101 653 477 1050 1.31e-47 182
MS.gene90811.t1 AT2G37010 26.891 595 372 17 101 653 477 1050 1.31e-47 182
MS.gene90811.t1 AT2G28070 25.508 541 371 13 127 660 138 653 8.79e-40 157
MS.gene90811.t1 AT2G28070 25.508 541 371 13 127 660 138 653 8.79e-40 157
MS.gene90811.t1 AT1G15520 23.600 500 307 8 66 550 815 1254 1.39e-39 158
MS.gene90811.t1 AT1G15520 21.575 584 379 10 122 660 169 718 1.23e-36 149
MS.gene90811.t1 AT5G60740 35.211 284 176 4 80 360 476 754 6.16e-39 156
MS.gene90811.t1 AT3G28380 33.486 218 133 8 121 334 1011 1220 5.36e-18 89.7
MS.gene90811.t1 AT3G28380 28.571 252 158 10 95 334 341 582 1.45e-12 72.0
MS.gene90811.t1 AT3G28390 33.028 218 134 8 121 334 996 1205 4.38e-16 83.6
MS.gene90811.t1 AT3G28390 28.704 216 142 8 122 334 364 570 3.68e-13 73.9
MS.gene90811.t1 AT5G61700 29.885 174 112 4 133 304 626 791 4.26e-15 80.1
MS.gene90811.t1 AT5G61700 29.885 174 112 4 133 304 626 791 4.26e-15 80.1
MS.gene90811.t1 AT1G27940 28.507 221 146 7 117 334 383 594 4.96e-15 80.1
MS.gene90811.t1 AT1G27940 29.464 224 145 8 117 336 1015 1229 2.98e-14 77.4
MS.gene90811.t1 AT1G27940 28.507 221 146 7 117 334 169 380 6.14e-15 79.7
MS.gene90811.t1 AT1G27940 30.435 207 132 7 133 336 818 1015 3.29e-14 77.4
MS.gene90811.t1 AT3G47790 27.354 223 150 4 119 339 603 815 7.11e-15 79.3
MS.gene90811.t1 AT1G28010 27.193 228 154 7 117 341 384 602 7.67e-15 79.3
MS.gene90811.t1 AT1G28010 29.464 224 145 9 117 336 1017 1231 3.62e-12 70.9
MS.gene90811.t1 AT3G28415 31.193 218 138 8 121 334 1000 1209 1.05e-14 79.0
MS.gene90811.t1 AT3G28415 31.019 216 137 8 122 334 363 569 2.43e-13 74.7
MS.gene90811.t1 AT3G28415 31.193 218 138 8 121 334 992 1201 1.43e-14 78.6
MS.gene90811.t1 AT3G28415 31.019 216 137 8 122 334 355 561 3.10e-13 74.3
MS.gene90811.t1 AT3G62150 29.756 205 132 7 133 334 431 626 2.61e-14 77.8
MS.gene90811.t1 AT3G62150 30.159 189 114 7 122 302 1069 1247 2.33e-11 68.2
MS.gene90811.t1 AT3G62150 29.756 205 132 7 133 334 431 626 2.61e-14 77.8
MS.gene90811.t1 AT3G62150 30.159 189 114 7 122 302 1069 1247 2.33e-11 68.2
MS.gene90811.t1 AT3G62150 29.756 205 132 7 133 334 431 626 2.61e-14 77.8
MS.gene90811.t1 AT3G62150 30.159 189 114 7 122 302 1069 1247 2.33e-11 68.2
MS.gene90811.t1 AT3G28360 30.275 218 140 8 121 334 997 1206 2.92e-14 77.4
MS.gene90811.t1 AT5G61740 27.962 211 136 5 133 339 618 816 3.58e-14 77.0
MS.gene90811.t1 AT5G61740 27.962 211 136 5 133 339 584 782 3.73e-14 77.0
MS.gene90811.t1 AT5G61740 27.962 211 136 5 133 339 479 677 4.57e-14 76.6
MS.gene90811.t1 AT4G01830 32.195 205 127 7 133 334 381 576 5.98e-14 76.6
MS.gene90811.t1 AT4G01830 32.195 205 127 7 133 334 147 342 6.05e-14 76.3
MS.gene90811.t1 AT1G02520 31.220 205 129 7 133 334 409 604 6.17e-14 76.6
MS.gene90811.t1 AT1G02520 31.220 205 129 7 133 334 409 604 6.17e-14 76.6
MS.gene90811.t1 AT1G02520 31.220 205 129 7 133 334 409 604 6.17e-14 76.6
MS.gene90811.t1 AT3G28860 29.680 219 142 9 121 336 1026 1235 9.47e-14 75.9
MS.gene90811.t1 AT3G47730 27.570 214 138 6 130 339 555 755 1.29e-13 75.5
MS.gene90811.t1 AT3G47790 28.495 186 123 3 119 302 603 780 1.57e-13 75.1
MS.gene90811.t1 AT3G28345 30.556 216 138 8 122 334 376 582 1.90e-13 75.1
MS.gene90811.t1 AT3G28345 31.050 219 141 7 121 336 1011 1222 1.20e-12 72.4
MS.gene90811.t1 AT5G61700 27.014 211 138 6 133 339 626 824 2.31e-13 74.3
MS.gene90811.t1 AT3G47780 26.432 227 145 7 120 339 631 842 2.43e-13 74.3
MS.gene90811.t1 AT3G47790 28.495 186 123 3 119 302 484 661 2.58e-13 73.9
MS.gene90811.t1 AT5G61730 29.954 217 129 9 130 339 557 757 3.06e-13 73.9
MS.gene90811.t1 AT5G61730 29.767 215 132 8 130 339 547 747 3.10e-13 73.9
MS.gene90811.t1 AT1G10680 28.986 207 135 7 133 336 389 586 4.43e-13 73.6
MS.gene90811.t1 AT2G41700 25.112 223 154 5 120 339 1471 1683 4.58e-13 73.9
MS.gene90811.t1 AT2G41700 29.814 161 101 4 123 281 568 718 2.64e-12 71.2
MS.gene90811.t1 AT2G41700 25.112 223 154 5 120 339 1429 1641 4.60e-13 73.9
MS.gene90811.t1 AT2G41700 29.814 161 101 4 123 281 498 648 2.53e-12 71.2
MS.gene90811.t1 AT1G10680 28.986 207 135 7 133 336 389 586 5.55e-13 73.6
MS.gene90811.t1 AT1G02530 30.660 212 121 7 133 334 396 591 7.66e-13 72.8
MS.gene90811.t1 AT5G61690 29.545 220 125 10 130 339 556 755 8.72e-13 72.8
MS.gene90811.t1 AT4G01820 31.220 205 129 7 133 334 376 571 1.27e-12 72.0
MS.gene90811.t1 AT5G61690 28.571 217 132 9 130 339 556 756 1.36e-12 72.0
MS.gene90811.t1 AT1G02530 30.660 212 121 7 133 334 396 591 1.39e-12 72.0
MS.gene90811.t1 AT1G70610 27.928 222 143 8 122 336 472 683 1.44e-12 71.6
MS.gene90811.t1 AT2G47000 27.805 205 136 7 133 334 412 607 1.49e-12 72.0
MS.gene90811.t1 AT2G47000 27.805 205 136 7 133 334 412 607 1.49e-12 72.0
MS.gene90811.t1 AT1G70610 29.384 211 132 8 133 336 302 502 1.64e-12 71.2
MS.gene90811.t1 AT4G01820 31.220 205 129 7 133 334 376 571 1.64e-12 72.0
MS.gene90811.t1 AT2G47000 27.805 205 136 7 133 334 412 607 1.82e-12 71.6
MS.gene90811.t1 AT3G62700 25.322 233 153 5 123 354 657 869 1.93e-12 71.6
MS.gene90811.t1 AT3G47770 27.854 219 142 6 120 334 602 808 2.05e-12 71.2
MS.gene90811.t1 AT3G47770 27.854 219 142 6 120 334 628 834 2.21e-12 71.2
MS.gene90811.t1 AT2G47000 27.805 205 136 7 133 334 412 607 2.22e-12 71.6
MS.gene90811.t1 AT2G47000 27.805 205 136 7 133 334 412 607 2.40e-12 71.2
MS.gene90811.t1 AT2G47000 30.688 189 113 7 122 302 1059 1237 4.25e-12 70.5
MS.gene90811.t1 AT2G47000 27.805 205 136 7 133 334 412 607 2.40e-12 71.2
MS.gene90811.t1 AT2G47000 30.688 189 113 7 122 302 1059 1237 4.25e-12 70.5
MS.gene90811.t1 AT2G47000 27.805 205 136 7 133 334 412 607 2.40e-12 71.2
MS.gene90811.t1 AT2G47000 30.688 189 113 7 122 302 1059 1237 4.25e-12 70.5
MS.gene90811.t1 AT5G39040 30.222 225 138 10 119 336 410 622 4.09e-12 70.1
MS.gene90811.t1 AT3G47750 26.126 222 152 6 120 339 633 844 4.25e-12 70.5
MS.gene90811.t1 AT2G47800 25.751 233 152 5 123 354 659 871 1.23e-11 68.9
MS.gene90811.t1 AT4G25960 29.224 219 139 7 121 334 1046 1253 1.65e-11 68.6
MS.gene90811.t1 AT4G25960 29.480 173 113 6 133 302 429 595 2.35e-11 68.2
MS.gene90811.t1 AT3G47760 25.561 223 154 5 119 339 591 803 2.01e-11 68.2
MS.gene90811.t1 AT3G47760 25.561 223 154 5 119 339 631 843 2.10e-11 68.2
MS.gene90811.t1 AT3G47760 25.561 223 154 5 119 339 601 813 2.73e-11 67.8
MS.gene90811.t1 AT2G36910 28.636 220 137 9 122 334 1041 1247 3.94e-11 67.4
MS.gene90811.t1 AT5G46540 27.184 206 138 7 132 334 384 580 5.13e-11 67.0
MS.gene90811.t1 AT1G30420 27.315 216 139 7 119 334 629 826 8.07e-11 66.2

Find 173 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCGAATGCCTGAACTATT+TGG 0.152859 1.4:+87987846 MS.gene90811:CDS
TTATCATTCTTGCTTCATTT+TGG 0.154278 1.4:+87988210 MS.gene90811:CDS
CTACTTATGCAAATCCATTT+TGG 0.211206 1.4:+87987781 MS.gene90811:CDS
AGCCTTTCTTGTACTCCTTT+TGG 0.219663 1.4:-87987939 None:intergenic
TGGCTTGGGGTTTCTTCTTC+AGG 0.225959 1.4:+87988654 MS.gene90811:CDS
TCAGTGGGTTCTTTATTAAT+AGG 0.235316 1.4:+87988330 MS.gene90811:CDS
AAACCTCTCACAATGCTTAT+AGG 0.281654 1.4:+87988054 MS.gene90811:CDS
TCAAGAGGGAAACTAGTTTC+TGG 0.295725 1.4:+87987687 MS.gene90811:CDS
GTTAATAACTCAATCCAAAA+TGG 0.296482 1.4:-87987795 None:intergenic
TCATTCTTGCAACAATGTTT+TGG 0.303105 1.4:+87987901 MS.gene90811:CDS
ACTTAACCAATGACATATAA+TGG 0.306491 1.4:-87988382 None:intergenic
GAATCCCTGGGTATTGGATT+TGG 0.313486 1.4:+87988357 MS.gene90811:CDS
TTTGTGGGTAACTGTGGCTT+GGG 0.316020 1.4:+87988640 MS.gene90811:CDS
ATGCCGTATCTTAACACTAT+AGG 0.322711 1.4:-87986701 None:intergenic
CCTTCATACTTTGCAGAATT+CGG 0.325336 1.4:+87987459 MS.gene90811:CDS
CAGTGGGTTCTTTATTAATA+GGG 0.332362 1.4:+87988331 MS.gene90811:CDS
AAATGAAACGAACGAATTCC+CGG 0.335179 1.4:-87988234 None:intergenic
GGATTCAACAAGTGCTTTCA+TGG 0.335203 1.4:+87987287 MS.gene90811:CDS
TTGGGTGCTGTTATGGTAAC+TGG 0.336834 1.4:+87987876 MS.gene90811:CDS
TTTCTTGACGAGCCAACTTC+AGG 0.341163 1.4:+87987261 MS.gene90811:CDS
GGTGAGATCATGGCGTTTCT+TGG 0.342103 1.4:+87986853 MS.gene90811:CDS
TCTGTTCGGTTATCACCTTC+AGG 0.345099 1.4:-87987492 None:intergenic
TCGTTCGTTTCATTTCTTTC+AGG 0.346464 1.4:+87988242 MS.gene90811:CDS
GGGCTTGATGGTGGATTCTC+AGG 0.346703 1.4:+87988170 MS.gene90811:CDS
TTTCTTGGAGCTAGTGGCTC+TGG 0.348180 1.4:+87986868 MS.gene90811:CDS
CAACCAAGTTACAGAATCTT+AGG 0.348796 1.4:+87987369 MS.gene90811:CDS
TTCTGCAGAACTGCTTCATA+TGG 0.358279 1.4:-87988407 None:intergenic
TGCATTGAAGTTGAAATTGT+TGG 0.360821 1.4:+87988508 MS.gene90811:CDS
AACCTTCTAATTCGCGAATC+AGG 0.370916 1.4:-87987527 None:intergenic
TTGAGAGTGATCGCGGTAAT+CGG 0.379112 1.4:-87987077 None:intergenic
TTGGTTCCATTATATGTCAT+TGG 0.381039 1.4:+87988376 MS.gene90811:CDS
CTTATTTCTTATTGTTCAGT+GGG 0.382014 1.4:+87988315 MS.gene90811:CDS
TCTATTCTATATATCTTTGT+TGG 0.387563 1.4:+87988679 MS.gene90811:CDS
CATAAAATCAAAATAAGAAT+CGG 0.392779 1.4:-87986488 None:intergenic
CTCCCGCCGCCGTGCATCTC+CGG 0.394532 1.4:+87986747 MS.gene90811:CDS
GTTTGTGGGTAACTGTGGCT+TGG 0.399247 1.4:+87988639 MS.gene90811:CDS
ATTAATAGGGATAGAATCCC+TGG 0.400912 1.4:+87988344 MS.gene90811:CDS
TCGGTTATCACCTTCAGGTA+TGG 0.401898 1.4:-87987487 None:intergenic
GGCGAATGCCTGAACTATTT+GGG 0.401950 1.4:+87987847 MS.gene90811:CDS
GATAAGATTGGGTGCTGTTA+TGG 0.406222 1.4:+87987869 MS.gene90811:CDS
AACCGTTCTTGAATGAAAAC+TGG 0.411046 1.4:-87988017 None:intergenic
GGGATAGAATCCCTGGGTAT+TGG 0.417292 1.4:+87988351 MS.gene90811:CDS
GAAGGTCACCGTGGAGTCTC+TGG 0.420315 1.4:+87987180 MS.gene90811:CDS
TCTTGAAATGCTGGCGCTGA+TGG 0.422133 1.4:-87987670 None:intergenic
GCGTCTACTTGTTTAACAAC+TGG 0.429662 1.4:+87988566 MS.gene90811:CDS
CACCGGAGATGCACGGCGGC+GGG 0.431725 1.4:-87986749 None:intergenic
TGAACTATTTGGGATAAGAT+TGG 0.434241 1.4:+87987857 MS.gene90811:CDS
GAACTATTTGGGATAAGATT+GGG 0.435326 1.4:+87987858 MS.gene90811:CDS
GTGGCTGAGACACCTGCACT+TGG 0.436189 1.4:+87986769 MS.gene90811:CDS
ATTCTATATATCTTTGTTGG+TGG 0.447920 1.4:+87988682 MS.gene90811:CDS
TTCTATATATCTTTGTTGGT+GGG 0.448517 1.4:+87988683 MS.gene90811:CDS
TTCTTGGAGCTAGTGGCTCT+GGG 0.449662 1.4:+87986869 MS.gene90811:CDS
TGTGGTTCCTCATGTGATGT+TGG 0.452325 1.4:+87988265 MS.gene90811:CDS
CGGTTATCACCTTCAGGTAT+GGG 0.454278 1.4:-87987486 None:intergenic
TGACGAGCCAACTTCAGGAT+TGG 0.461842 1.4:+87987266 MS.gene90811:CDS
AGCGTTCAATAACTAATTCA+AGG 0.463453 1.4:+87987826 MS.gene90811:CDS
GCTTATTTCTTATTGTTCAG+TGG 0.469283 1.4:+87988314 MS.gene90811:CDS
TCAAACACGTTGGAGATGTA+AGG 0.471458 1.4:+87986572 MS.gene90811:CDS
GTTGAATCCAATCCTGAAGT+TGG 0.472403 1.4:-87987273 None:intergenic
CGCGAATTAGAAGGTTCACC+TGG 0.472590 1.4:+87987534 MS.gene90811:CDS
GGTCCAACGCGAATTCTGTT+CGG 0.475238 1.4:-87987506 None:intergenic
TAGTTTCCCTCTTGAAATGC+TGG 0.476179 1.4:-87987679 None:intergenic
ATGTAAGGAAGGAAGCTATC+GGG 0.477660 1.4:+87986587 MS.gene90811:CDS
CTCACCGTCACGTGCTTCGC+CGG 0.477672 1.4:-87986836 None:intergenic
TGATTGATGCTCTAGCAAAC+AGG 0.480005 1.4:+87986902 MS.gene90811:CDS
TCGTCAAGAAAGAGCACTAT+TGG 0.480175 1.4:-87987249 None:intergenic
GTTTCTTCCACTGTGAGCAT+TGG 0.481266 1.4:-87987033 None:intergenic
TGGGCTGTGGGGCTTGATGG+TGG 0.482302 1.4:+87988161 MS.gene90811:CDS
TAGTTGAATTCAACAAATCA+TGG 0.482581 1.4:+87987571 MS.gene90811:CDS
CACAGCCCAAAATGTTATGC+AGG 0.482611 1.4:-87988147 None:intergenic
GTGGTTCCTCATGTGATGTT+GGG 0.485752 1.4:+87988266 MS.gene90811:CDS
CAACTTGACAACTCTCCAAA+AGG 0.487959 1.4:+87987924 MS.gene90811:CDS
AATGCCCTCATTATCATTGA+AGG 0.488619 1.4:+87987644 MS.gene90811:CDS
TTCACGCGCCGCCGTGACGC+CGG 0.488668 1.4:+87986523 MS.gene90811:CDS
TGGCTGAGACACCTGCACTT+GGG 0.493222 1.4:+87986770 MS.gene90811:CDS
CCACCGGAGATGCACGGCGG+CGG 0.495140 1.4:-87986750 None:intergenic
CAAGCTTTGATTGATCAACT+AGG 0.496449 1.4:+87987123 MS.gene90811:CDS
ATAAAATCAAAATAAGAATC+GGG 0.498700 1.4:-87986487 None:intergenic
TGAGCAAGTGGAATTGTTTG+TGG 0.499772 1.4:+87988624 MS.gene90811:CDS
AGCACGTGACGGTGAGATCA+TGG 0.501988 1.4:+87986843 MS.gene90811:CDS
CGTTTCATTTCTTTCAGGTG+TGG 0.505398 1.4:+87988247 MS.gene90811:CDS
CTCCAAAAGGAGTACAAGAA+AGG 0.508567 1.4:+87987937 MS.gene90811:CDS
AATCTTATCCCAAATAGTTC+AGG 0.508571 1.4:-87987855 None:intergenic
GGCTGAGACACCTGCACTTG+GGG 0.511202 1.4:+87986771 MS.gene90811:CDS
ATTGAGGATGACGACGAAGA+TGG 0.513083 1.4:-87987753 None:intergenic
CTAGCAAACAGGATCGCAAA+AGG 0.515235 1.4:+87986913 MS.gene90811:CDS
GACCTGATTCGCGAATTAGA+AGG 0.515557 1.4:+87987525 MS.gene90811:CDS
AGACCTAAGATTCTGTAACT+TGG 0.516158 1.4:-87987372 None:intergenic
GGCTTCCTTCAATGATAATG+AGG 0.517545 1.4:-87987649 None:intergenic
CAAAATGGATTTGCATAAGT+AGG 0.521936 1.4:-87987780 None:intergenic
CCGAATTCTGCAAAGTATGA+AGG 0.522524 1.4:-87987459 None:intergenic
GTTGAAGCAAAATGCGGTGA+CGG 0.523144 1.4:+87988598 MS.gene90811:CDS
GAAAGAGCACTATTGGATCA+TGG 0.525313 1.4:-87987242 None:intergenic
ACTATAGGTAAGGTTGTTGA+AGG 0.525572 1.4:-87986686 None:intergenic
GAGCAAGTGGAATTGTTTGT+GGG 0.527114 1.4:+87988625 MS.gene90811:CDS
TGCATAAGTAGGCACGATTG+AGG 0.530063 1.4:-87987769 None:intergenic
TCTGCAGAACTGCTTCATAT+GGG 0.533677 1.4:-87988406 None:intergenic
AGTGAGAGAAACAACAAAGC+AGG 0.536967 1.4:-87988116 None:intergenic
ATGGCGTTTCTTGGAGCTAG+TGG 0.540825 1.4:+87986862 MS.gene90811:CDS
GTGGAGTCTCTGGTGGAGAA+AGG 0.541787 1.4:+87987190 MS.gene90811:CDS
TCCGAGAGTCGGCATATCAC+CGG 0.542309 1.4:-87986542 None:intergenic
GCCGGTGATATGCCGACTCT+CGG 0.543798 1.4:+87986541 MS.gene90811:CDS
CTCACAATGCTTATAGGAGA+TGG 0.546447 1.4:+87988060 MS.gene90811:CDS
TAATCGGAATTCCGCGGCAA+AGG 0.547389 1.4:-87987061 None:intergenic
AGTGCAGGTGTCTCAGCCAC+CGG 0.547656 1.4:-87986766 None:intergenic
AAAGGAGTACAAGAAAGGCT+TGG 0.550683 1.4:+87987942 MS.gene90811:CDS
GAAAGGCGTCGAGTTTCAAT+CGG 0.554393 1.4:+87987207 MS.gene90811:CDS
CACTCTCGACATCAACGGAA+TGG 0.557146 1.4:+87986636 MS.gene90811:CDS
GATGTAAGGAAGGAAGCTAT+CGG 0.560171 1.4:+87986586 MS.gene90811:CDS
AACGCCGTCTCCCCAAGTGC+AGG 0.561438 1.4:-87986781 None:intergenic
GACACCTGCACTTGGGGAGA+CGG 0.565757 1.4:+87986777 MS.gene90811:CDS
ATCGCAAAAGGAAAATTGAA+AGG 0.566477 1.4:+87986925 MS.gene90811:CDS
GGTGGAGTCTCGTCTTCTGA+AGG 0.569244 1.4:+87986972 MS.gene90811:CDS
CCACTGTGAGCATTGGAAAG+AGG 0.569246 1.4:-87987026 None:intergenic
AGGAAGGAAGCTATCGGGGA+TGG 0.572719 1.4:+87986592 MS.gene90811:CDS
GTATCTTAACACTATAGGTA+AGG 0.576921 1.4:-87986696 None:intergenic
TGGAACCAAATCCAATACCC+AGG 0.580582 1.4:-87988362 None:intergenic
TTACCTATAGTGTTAAGATA+CGG 0.582538 1.4:+87986698 MS.gene90811:CDS
CCGCCGCCGTGCATCTCCGG+TGG 0.586659 1.4:+87986750 MS.gene90811:CDS
CGGTGACGGATTTGAGCAAG+TGG 0.590283 1.4:+87988612 MS.gene90811:CDS
CGTATGATCTTCTTATCACG+TGG 0.592532 1.4:+87987402 MS.gene90811:CDS
TCGGCATATCACCGGCGTCA+CGG 0.594735 1.4:-87986534 None:intergenic
CTTCAAAGAATTGCACAAAG+TGG 0.594832 1.4:+87987321 MS.gene90811:CDS
AAAGCTCAACGGCGAGTCGG+TGG 0.599898 1.4:+87986954 MS.gene90811:CDS
ATTCTGCTCAATGACATCTC+CGG 0.600468 1.4:+87986817 MS.gene90811:CDS
GATGTTGGGTTACACTATTG+TGG 0.602239 1.4:+87988280 MS.gene90811:CDS
TATCACCTTCAGGTATGGGA+TGG 0.608009 1.4:-87987482 None:intergenic
CGGGGATGGCAGTGAGACGC+CGG 0.609034 1.4:+87986606 MS.gene90811:CDS
GAATTGTTTGTGGGTAACTG+TGG 0.610003 1.4:+87988634 MS.gene90811:CDS
TCTCAGCCACCGGAGATGCA+CGG 0.610081 1.4:-87986756 None:intergenic
GGAACCAAATCCAATACCCA+GGG 0.610394 1.4:-87988361 None:intergenic
TTTCTCCACCAGAGACTCCA+CGG 0.615672 1.4:-87987188 None:intergenic
TTGTTGAAGGAAAGAACGAA+AGG 0.617772 1.4:-87986673 None:intergenic
ATGTCGAGAGTGTGATGCAC+CGG 0.618068 1.4:-87986625 None:intergenic
CATCACACTCTCGACATCAA+CGG 0.619231 1.4:+87986631 MS.gene90811:CDS
GGTCACCGTGGAGTCTCTGG+TGG 0.623950 1.4:+87987183 MS.gene90811:CDS
GCATCAGACACTGAAGCAAG+AGG 0.624395 1.4:-87988488 None:intergenic
TTGTGGGTAACTGTGGCTTG+GGG 0.626344 1.4:+87988641 MS.gene90811:CDS
TGTAAAGCTCAACGGCGAGT+CGG 0.631517 1.4:+87986951 MS.gene90811:CDS
TTGAGAAGCTGTCCGAGAGT+CGG 0.635744 1.4:-87986553 None:intergenic
TGTAAGGAAGGAAGCTATCG+GGG 0.639087 1.4:+87986588 MS.gene90811:CDS
ATCTCCGGCGAAGCACGTGA+CGG 0.639179 1.4:+87986832 MS.gene90811:CDS
GCTTCCTTCAATGATAATGA+GGG 0.639546 1.4:-87987648 None:intergenic
AAAGGAACTGTAAAGCTCAA+CGG 0.639894 1.4:+87986943 MS.gene90811:CDS
TTAATAGGGATAGAATCCCT+GGG 0.640373 1.4:+87988345 MS.gene90811:CDS
GAGATCATCTTGCATCACAT+AGG 0.645209 1.4:-87987004 None:intergenic
AACTGGTAGTGCATCTGCGG+TGG 0.648729 1.4:-87988000 None:intergenic
TCTCGACATCAACGGAATGG+AGG 0.648871 1.4:+87986639 MS.gene90811:CDS
ATCAGCGCCAGCATTTCAAG+AGG 0.649509 1.4:+87987672 MS.gene90811:CDS
ACACGTTGGAGATGTAAGGA+AGG 0.649816 1.4:+87986576 MS.gene90811:CDS
TGGTGGGTAGCAAGAACAAG+AGG 0.650258 1.4:+87988699 MS.gene90811:CDS
TTCGGCCATCCCATACCTGA+AGG 0.651499 1.4:+87987477 MS.gene90811:CDS
TAACCGAACAGAATTCGCGT+TGG 0.652420 1.4:+87987503 MS.gene90811:CDS
GTGTAACCCAACATCACATG+AGG 0.661487 1.4:-87988272 None:intergenic
GGACAGCTTCTCAAACACGT+TGG 0.662779 1.4:+87986562 MS.gene90811:CDS
TCTCCTATAAGCATTGTGAG+AGG 0.665168 1.4:-87988057 None:intergenic
CCTCTTTCCAATGCTCACAG+TGG 0.666857 1.4:+87987026 MS.gene90811:CDS
AAAACAGTTATCGGAGACGA+AGG 0.666968 1.4:+87987162 MS.gene90811:CDS
GCATATCACCGGCGTCACGG+CGG 0.668945 1.4:-87986531 None:intergenic
ACGGCGGCGGGAGAATAAGT+CGG 0.670582 1.4:-87986737 None:intergenic
AATAGCATGAGAAATCACAT+AGG 0.671117 1.4:-87988084 None:intergenic
AAGTATGAAGGTAACTGCGA+TGG 0.674468 1.4:-87987447 None:intergenic
GAAAACTGGTAGTGCATCTG+CGG 0.674706 1.4:-87988003 None:intergenic
AGAAACACTCACCTTTGCCG+CGG 0.677312 1.4:+87987050 MS.gene90811:CDS
GAATTAGAAGGTTCACCTGG+AGG 0.684688 1.4:+87987537 MS.gene90811:CDS
TGACGACGAAGATGGTGATG+TGG 0.690462 1.4:-87987745 None:intergenic
ATCGGAGACGAAGGTCACCG+TGG 0.697374 1.4:+87987171 MS.gene90811:CDS
TCAGCGCCAGCATTTCAAGA+GGG 0.704238 1.4:+87987673 MS.gene90811:CDS
TCGCGGTAATCGGAATTCCG+CGG 0.716124 1.4:-87987067 None:intergenic
TGATTTGTTGAAGCAAAATG+CGG 0.718236 1.4:+87988592 MS.gene90811:CDS
GACAGTATGAGTGATACACT+AGG 0.719442 1.4:+87988530 MS.gene90811:CDS
CGTGGACAGACAGTTTACAG+CGG 0.758327 1.4:+87987420 MS.gene90811:CDS
CAGCCACCGGAGATGCACGG+CGG 0.765037 1.4:-87986753 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATCAAAATAAGAATC+GGG - chr1.4:87986490-87986509 None:intergenic 15.0%
!! CATAAAATCAAAATAAGAAT+CGG - chr1.4:87986491-87986510 None:intergenic 15.0%
!!! TTATTTTGATTTTATGGAAA+TGG + chr1.4:87986495-87986514 MS.gene90811:CDS 15.0%
!! TCTATTCTATATATCTTTGT+TGG + chr1.4:87988679-87988698 MS.gene90811:CDS 20.0%
!!! CGATTCTTATTTTGATTTTA+TGG + chr1.4:87986489-87986508 MS.gene90811:CDS 20.0%
! ACTTAACCAATGACATATAA+TGG - chr1.4:87988385-87988404 None:intergenic 25.0%
! ATTCTATATATCTTTGTTGG+TGG + chr1.4:87988682-87988701 MS.gene90811:CDS 25.0%
! GTTAATAACTCAATCCAAAA+TGG - chr1.4:87987798-87987817 None:intergenic 25.0%
! TAGTTGAATTCAACAAATCA+TGG + chr1.4:87987571-87987590 MS.gene90811:CDS 25.0%
! TTACCTATAGTGTTAAGATA+CGG + chr1.4:87986698-87986717 MS.gene90811:CDS 25.0%
! TTCTATATATCTTTGTTGGT+GGG + chr1.4:87988683-87988702 MS.gene90811:CDS 25.0%
!! CTTATTTCTTATTGTTCAGT+GGG + chr1.4:87988315-87988334 MS.gene90811:CDS 25.0%
!! TATCATTCTTGCTTCATTTT+GGG + chr1.4:87988211-87988230 MS.gene90811:CDS 25.0%
!! TTATCATTCTTGCTTCATTT+TGG + chr1.4:87988210-87988229 MS.gene90811:CDS 25.0%
AATAGCATGAGAAATCACAT+AGG - chr1.4:87988087-87988106 None:intergenic 30.0%
AATCTTATCCCAAATAGTTC+AGG - chr1.4:87987858-87987877 None:intergenic 30.0%
AGCGTTCAATAACTAATTCA+AGG + chr1.4:87987826-87987845 MS.gene90811:CDS 30.0%
ATCGCAAAAGGAAAATTGAA+AGG + chr1.4:87986925-87986944 MS.gene90811:CDS 30.0%
GTATCTTAACACTATAGGTA+AGG - chr1.4:87986699-87986718 None:intergenic 30.0%
TGCATTGAAGTTGAAATTGT+TGG + chr1.4:87988508-87988527 MS.gene90811:CDS 30.0%
TTGGTTCCATTATATGTCAT+TGG + chr1.4:87988376-87988395 MS.gene90811:CDS 30.0%
! CAAAATGGATTTGCATAAGT+AGG - chr1.4:87987783-87987802 None:intergenic 30.0%
! CAGTGGGTTCTTTATTAATA+GGG + chr1.4:87988331-87988350 MS.gene90811:CDS 30.0%
! CTACTTATGCAAATCCATTT+TGG + chr1.4:87987781-87987800 MS.gene90811:CDS 30.0%
! GAACTATTTGGGATAAGATT+GGG + chr1.4:87987858-87987877 MS.gene90811:CDS 30.0%
! GCTTATTTCTTATTGTTCAG+TGG + chr1.4:87988314-87988333 MS.gene90811:CDS 30.0%
! TACCAGTTTTCATTCAAGAA+CGG + chr1.4:87988015-87988034 MS.gene90811:CDS 30.0%
! TCAGTGGGTTCTTTATTAAT+AGG + chr1.4:87988330-87988349 MS.gene90811:CDS 30.0%
! TCATTCTTGCAACAATGTTT+TGG + chr1.4:87987901-87987920 MS.gene90811:CDS 30.0%
! TGAACTATTTGGGATAAGAT+TGG + chr1.4:87987857-87987876 MS.gene90811:CDS 30.0%
! TTTTGCCTGCATAACATTTT+GGG + chr1.4:87988142-87988161 MS.gene90811:CDS 30.0%
!! TGATTTGTTGAAGCAAAATG+CGG + chr1.4:87988592-87988611 MS.gene90811:CDS 30.0%
AAACCTCTCACAATGCTTAT+AGG + chr1.4:87988054-87988073 MS.gene90811:CDS 35.0%
AAAGGAACTGTAAAGCTCAA+CGG + chr1.4:87986943-87986962 MS.gene90811:CDS 35.0%
AAATGAAACGAACGAATTCC+CGG - chr1.4:87988237-87988256 None:intergenic 35.0%
AACCGTTCTTGAATGAAAAC+TGG - chr1.4:87988020-87988039 None:intergenic 35.0%
AACGCTGCAAAAACAGTTAT+CGG + chr1.4:87987153-87987172 MS.gene90811:CDS 35.0%
AATGCCCTCATTATCATTGA+AGG + chr1.4:87987644-87987663 MS.gene90811:CDS 35.0%
ACTATAGGTAAGGTTGTTGA+AGG - chr1.4:87986689-87986708 None:intergenic 35.0%
AGACCTAAGATTCTGTAACT+TGG - chr1.4:87987375-87987394 None:intergenic 35.0%
ATGCCGTATCTTAACACTAT+AGG - chr1.4:87986704-87986723 None:intergenic 35.0%
ATTAATAGGGATAGAATCCC+TGG + chr1.4:87988344-87988363 MS.gene90811:CDS 35.0%
CAACCAAGTTACAGAATCTT+AGG + chr1.4:87987369-87987388 MS.gene90811:CDS 35.0%
CCTTCATACTTTGCAGAATT+CGG + chr1.4:87987459-87987478 MS.gene90811:CDS 35.0%
CTTCAAAGAATTGCACAAAG+TGG + chr1.4:87987321-87987340 MS.gene90811:CDS 35.0%
TCGTTCGTTTCATTTCTTTC+AGG + chr1.4:87988242-87988261 MS.gene90811:CDS 35.0%
TTAATAGGGATAGAATCCCT+GGG + chr1.4:87988345-87988364 MS.gene90811:CDS 35.0%
TTGTTGAAGGAAAGAACGAA+AGG - chr1.4:87986676-87986695 None:intergenic 35.0%
! CAAGCTTTGATTGATCAACT+AGG + chr1.4:87987123-87987142 MS.gene90811:CDS 35.0%
! CTTTTGCCTGCATAACATTT+TGG + chr1.4:87988141-87988160 MS.gene90811:CDS 35.0%
! GCTTCCTTCAATGATAATGA+GGG - chr1.4:87987651-87987670 None:intergenic 35.0%
!! TTTGATTTTGAGAGTGATCG+CGG - chr1.4:87987087-87987106 None:intergenic 35.0%
AAAACAGTTATCGGAGACGA+AGG + chr1.4:87987162-87987181 MS.gene90811:CDS 40.0%
AACCTTCTAATTCGCGAATC+AGG - chr1.4:87987530-87987549 None:intergenic 40.0%
AAGTATGAAGGTAACTGCGA+TGG - chr1.4:87987450-87987469 None:intergenic 40.0%
AGTGAGAGAAACAACAAAGC+AGG - chr1.4:87988119-87988138 None:intergenic 40.0%
ATGTAAGGAAGGAAGCTATC+GGG + chr1.4:87986587-87986606 MS.gene90811:CDS 40.0%
ATTCTGCTCAATGACATCTC+CGG + chr1.4:87986817-87986836 MS.gene90811:CDS 40.0%
CAACTTGACAACTCTCCAAA+AGG + chr1.4:87987924-87987943 MS.gene90811:CDS 40.0%
CCGAATTCTGCAAAGTATGA+AGG - chr1.4:87987462-87987481 None:intergenic 40.0%
CGTATGATCTTCTTATCACG+TGG + chr1.4:87987402-87987421 MS.gene90811:CDS 40.0%
CTCACAATGCTTATAGGAGA+TGG + chr1.4:87988060-87988079 MS.gene90811:CDS 40.0%
GAATTGTTTGTGGGTAACTG+TGG + chr1.4:87988634-87988653 MS.gene90811:CDS 40.0%
GACAGTATGAGTGATACACT+AGG + chr1.4:87988530-87988549 MS.gene90811:CDS 40.0%
GAGATCATCTTGCATCACAT+AGG - chr1.4:87987007-87987026 None:intergenic 40.0%
GAGCAAGTGGAATTGTTTGT+GGG + chr1.4:87988625-87988644 MS.gene90811:CDS 40.0%
GATGTAAGGAAGGAAGCTAT+CGG + chr1.4:87986586-87986605 MS.gene90811:CDS 40.0%
GATGTTGGGTTACACTATTG+TGG + chr1.4:87988280-87988299 MS.gene90811:CDS 40.0%
GCGTCTACTTGTTTAACAAC+TGG + chr1.4:87988566-87988585 MS.gene90811:CDS 40.0%
GGATTCAACAAGTGCTTTCA+TGG + chr1.4:87987287-87987306 MS.gene90811:CDS 40.0%
GTTGAATCCAATCCTGAAGT+TGG - chr1.4:87987276-87987295 None:intergenic 40.0%
TAGTTTCCCTCTTGAAATGC+TGG - chr1.4:87987682-87987701 None:intergenic 40.0%
TCAAACACGTTGGAGATGTA+AGG + chr1.4:87986572-87986591 MS.gene90811:CDS 40.0%
TCTGCAGAACTGCTTCATAT+GGG - chr1.4:87988409-87988428 None:intergenic 40.0%
TGAGCAAGTGGAATTGTTTG+TGG + chr1.4:87988624-87988643 MS.gene90811:CDS 40.0%
TGATTGATGCTCTAGCAAAC+AGG + chr1.4:87986902-87986921 MS.gene90811:CDS 40.0%
TTCTGCAGAACTGCTTCATA+TGG - chr1.4:87988410-87988429 None:intergenic 40.0%
! AAAGGAGTACAAGAAAGGCT+TGG + chr1.4:87987942-87987961 MS.gene90811:CDS 40.0%
! ACTAAGCTTTTTGTTCCTCC+AGG - chr1.4:87987555-87987574 None:intergenic 40.0%
! AGCCTTTCTTGTACTCCTTT+TGG - chr1.4:87987942-87987961 None:intergenic 40.0%
! ATGCAGCTAAGTGTTTTGTG+AGG + chr1.4:87988441-87988460 MS.gene90811:CDS 40.0%
! ATTCTTGCTTCATTTTGGGC+CGG + chr1.4:87988215-87988234 MS.gene90811:CDS 40.0%
! CGTTTCATTTCTTTCAGGTG+TGG + chr1.4:87988247-87988266 MS.gene90811:CDS 40.0%
! CTCCAAAAGGAGTACAAGAA+AGG + chr1.4:87987937-87987956 MS.gene90811:CDS 40.0%
! GGCTTCCTTCAATGATAATG+AGG - chr1.4:87987652-87987671 None:intergenic 40.0%
! TCAAGAGGGAAACTAGTTTC+TGG + chr1.4:87987687-87987706 MS.gene90811:CDS 40.0%
! TCTCCTATAAGCATTGTGAG+AGG - chr1.4:87988060-87988079 None:intergenic 40.0%
! TGCAGCTAAGTGTTTTGTGA+GGG + chr1.4:87988442-87988461 MS.gene90811:CDS 40.0%
! TGCATAACATTTTGGGCTGT+GGG + chr1.4:87988149-87988168 MS.gene90811:CDS 40.0%
!! GAAAGAGCACTATTGGATCA+TGG - chr1.4:87987245-87987264 None:intergenic 40.0%
!! GATAAGATTGGGTGCTGTTA+TGG + chr1.4:87987869-87987888 MS.gene90811:CDS 40.0%
!! TCGTCAAGAAAGAGCACTAT+TGG - chr1.4:87987252-87987271 None:intergenic 40.0%
!!! TAACTGTTTTTGCAGCGTTG+CGG - chr1.4:87987152-87987171 None:intergenic 40.0%
ACACGTTGGAGATGTAAGGA+AGG + chr1.4:87986576-87986595 MS.gene90811:CDS 45.0%
AGGCGAATGCCTGAACTATT+TGG + chr1.4:87987846-87987865 MS.gene90811:CDS 45.0%
ATTGAGGATGACGACGAAGA+TGG - chr1.4:87987756-87987775 None:intergenic 45.0%
CACAGCCCAAAATGTTATGC+AGG - chr1.4:87988150-87988169 None:intergenic 45.0%
CATCACACTCTCGACATCAA+CGG + chr1.4:87986631-87986650 MS.gene90811:CDS 45.0%
CGGTTATCACCTTCAGGTAT+GGG - chr1.4:87987489-87987508 None:intergenic 45.0%
CTAGCAAACAGGATCGCAAA+AGG + chr1.4:87986913-87986932 MS.gene90811:CDS 45.0%
GAATTAGAAGGTTCACCTGG+AGG + chr1.4:87987537-87987556 MS.gene90811:CDS 45.0%
GGAACCAAATCCAATACCCA+GGG - chr1.4:87988364-87988383 None:intergenic 45.0%
GGCGAATGCCTGAACTATTT+GGG + chr1.4:87987847-87987866 MS.gene90811:CDS 45.0%
GTGGTTCCTCATGTGATGTT+GGG + chr1.4:87988266-87988285 MS.gene90811:CDS 45.0%
GTGTAACCCAACATCACATG+AGG - chr1.4:87988275-87988294 None:intergenic 45.0%
GTTGAAGCAAAATGCGGTGA+CGG + chr1.4:87988598-87988617 MS.gene90811:CDS 45.0%
GTTTCTTCCACTGTGAGCAT+TGG - chr1.4:87987036-87987055 None:intergenic 45.0%
TAACCGAACAGAATTCGCGT+TGG + chr1.4:87987503-87987522 MS.gene90811:CDS 45.0%
TATCACCTTCAGGTATGGGA+TGG - chr1.4:87987485-87987504 None:intergenic 45.0%
TCGGTTATCACCTTCAGGTA+TGG - chr1.4:87987490-87987509 None:intergenic 45.0%
TCTGTTCGGTTATCACCTTC+AGG - chr1.4:87987495-87987514 None:intergenic 45.0%
TGCATAAGTAGGCACGATTG+AGG - chr1.4:87987772-87987791 None:intergenic 45.0%
TGGAACCAAATCCAATACCC+AGG - chr1.4:87988365-87988384 None:intergenic 45.0%
TGTAAGGAAGGAAGCTATCG+GGG + chr1.4:87986588-87986607 MS.gene90811:CDS 45.0%
TGTGGTTCCTCATGTGATGT+TGG + chr1.4:87988265-87988284 MS.gene90811:CDS 45.0%
TTGAGAGTGATCGCGGTAAT+CGG - chr1.4:87987080-87987099 None:intergenic 45.0%
TTTCTTGACGAGCCAACTTC+AGG + chr1.4:87987261-87987280 MS.gene90811:CDS 45.0%
TTTGTGGGTAACTGTGGCTT+GGG + chr1.4:87988640-87988659 MS.gene90811:CDS 45.0%
! AGCTAAGTGTTTTGTGAGGG+GGG + chr1.4:87988445-87988464 MS.gene90811:CDS 45.0%
! CAGCTAAGTGTTTTGTGAGG+GGG + chr1.4:87988444-87988463 MS.gene90811:CDS 45.0%
! CTGCATAACATTTTGGGCTG+TGG + chr1.4:87988148-87988167 MS.gene90811:CDS 45.0%
! GAAAACTGGTAGTGCATCTG+CGG - chr1.4:87988006-87988025 None:intergenic 45.0%
! GACCTGATTCGCGAATTAGA+AGG + chr1.4:87987525-87987544 MS.gene90811:CDS 45.0%
! GCAGCTAAGTGTTTTGTGAG+GGG + chr1.4:87988443-87988462 MS.gene90811:CDS 45.0%
! GCATAACATTTTGGGCTGTG+GGG + chr1.4:87988150-87988169 MS.gene90811:CDS 45.0%
! TTCTTGCTTCATTTTGGGCC+GGG + chr1.4:87988216-87988235 MS.gene90811:CDS 45.0%
!! GAAAGGCGTCGAGTTTCAAT+CGG + chr1.4:87987207-87987226 MS.gene90811:CDS 45.0%
!! GAATCCCTGGGTATTGGATT+TGG + chr1.4:87988357-87988376 MS.gene90811:CDS 45.0%
!! TTGGGTGCTGTTATGGTAAC+TGG + chr1.4:87987876-87987895 MS.gene90811:CDS 45.0%
AGAAACACTCACCTTTGCCG+CGG + chr1.4:87987050-87987069 MS.gene90811:CDS 50.0%
ATCAGCGCCAGCATTTCAAG+AGG + chr1.4:87987672-87987691 MS.gene90811:CDS 50.0%
ATGGCGTTTCTTGGAGCTAG+TGG + chr1.4:87986862-87986881 MS.gene90811:CDS 50.0%
CACTCTCGACATCAACGGAA+TGG + chr1.4:87986636-87986655 MS.gene90811:CDS 50.0%
CCTCTTTCCAATGCTCACAG+TGG + chr1.4:87987026-87987045 MS.gene90811:CDS 50.0%
CGCGAATTAGAAGGTTCACC+TGG + chr1.4:87987534-87987553 MS.gene90811:CDS 50.0%
CGTGGACAGACAGTTTACAG+CGG + chr1.4:87987420-87987439 MS.gene90811:CDS 50.0%
GCATCAGACACTGAAGCAAG+AGG - chr1.4:87988491-87988510 None:intergenic 50.0%
GGACAGCTTCTCAAACACGT+TGG + chr1.4:87986562-87986581 MS.gene90811:CDS 50.0%
GGGATAGAATCCCTGGGTAT+TGG + chr1.4:87988351-87988370 MS.gene90811:CDS 50.0%
GGTCCAACGCGAATTCTGTT+CGG - chr1.4:87987509-87987528 None:intergenic 50.0%
GGTGAGATCATGGCGTTTCT+TGG + chr1.4:87986853-87986872 MS.gene90811:CDS 50.0%
GTTTGTGGGTAACTGTGGCT+TGG + chr1.4:87988639-87988658 MS.gene90811:CDS 50.0%
TAATCGGAATTCCGCGGCAA+AGG - chr1.4:87987064-87987083 None:intergenic 50.0%
TCAGCGCCAGCATTTCAAGA+GGG + chr1.4:87987673-87987692 MS.gene90811:CDS 50.0%
TCTCGACATCAACGGAATGG+AGG + chr1.4:87986639-87986658 MS.gene90811:CDS 50.0%
TGACGAGCCAACTTCAGGAT+TGG + chr1.4:87987266-87987285 MS.gene90811:CDS 50.0%
TGTAAAGCTCAACGGCGAGT+CGG + chr1.4:87986951-87986970 MS.gene90811:CDS 50.0%
TTCTTGGAGCTAGTGGCTCT+GGG + chr1.4:87986869-87986888 MS.gene90811:CDS 50.0%
TTGAGAAGCTGTCCGAGAGT+CGG - chr1.4:87986556-87986575 None:intergenic 50.0%
TTGTGGGTAACTGTGGCTTG+GGG + chr1.4:87988641-87988660 MS.gene90811:CDS 50.0%
TTTCTCCACCAGAGACTCCA+CGG - chr1.4:87987191-87987210 None:intergenic 50.0%
TTTCTTGGAGCTAGTGGCTC+TGG + chr1.4:87986868-87986887 MS.gene90811:CDS 50.0%
! ATGTCGAGAGTGTGATGCAC+CGG - chr1.4:87986628-87986647 None:intergenic 50.0%
! TCTTGAAATGCTGGCGCTGA+TGG - chr1.4:87987673-87987692 None:intergenic 50.0%
! TGACGACGAAGATGGTGATG+TGG - chr1.4:87987748-87987767 None:intergenic 50.0%
! TGGCTTGGGGTTTCTTCTTC+AGG + chr1.4:87988654-87988673 MS.gene90811:CDS 50.0%
! TGGTGGGTAGCAAGAACAAG+AGG + chr1.4:87988699-87988718 MS.gene90811:CDS 50.0%
!! CCACTGTGAGCATTGGAAAG+AGG - chr1.4:87987029-87987048 None:intergenic 50.0%
AGCACGTGACGGTGAGATCA+TGG + chr1.4:87986843-87986862 MS.gene90811:CDS 55.0%
AGGAAGGAAGCTATCGGGGA+TGG + chr1.4:87986592-87986611 MS.gene90811:CDS 55.0%
GGTGGAGTCTCGTCTTCTGA+AGG + chr1.4:87986972-87986991 MS.gene90811:CDS 55.0%
GTGGAGTCTCTGGTGGAGAA+AGG + chr1.4:87987190-87987209 MS.gene90811:CDS 55.0%
TCCGAGAGTCGGCATATCAC+CGG - chr1.4:87986545-87986564 None:intergenic 55.0%
TCGCGGTAATCGGAATTCCG+CGG - chr1.4:87987070-87987089 None:intergenic 55.0%
TGGCTGAGACACCTGCACTT+GGG + chr1.4:87986770-87986789 MS.gene90811:CDS 55.0%
TTCGGCCATCCCATACCTGA+AGG + chr1.4:87987477-87987496 MS.gene90811:CDS 55.0%
! AACTGGTAGTGCATCTGCGG+TGG - chr1.4:87988003-87988022 None:intergenic 55.0%
! TTTTGGGCTGTGGGGCTTGA+TGG + chr1.4:87988158-87988177 MS.gene90811:CDS 55.0%
!! CGGTGACGGATTTGAGCAAG+TGG + chr1.4:87988612-87988631 MS.gene90811:CDS 55.0%
!! GGGCTTGATGGTGGATTCTC+AGG + chr1.4:87988170-87988189 MS.gene90811:CDS 55.0%
AAAGCTCAACGGCGAGTCGG+TGG + chr1.4:87986954-87986973 MS.gene90811:CDS 60.0%
ACGGCGGCGGGAGAATAAGT+CGG - chr1.4:87986740-87986759 None:intergenic 60.0%
AGTGCAGGTGTCTCAGCCAC+CGG - chr1.4:87986769-87986788 None:intergenic 60.0%
ATCGGAGACGAAGGTCACCG+TGG + chr1.4:87987171-87987190 MS.gene90811:CDS 60.0%
ATCTCCGGCGAAGCACGTGA+CGG + chr1.4:87986832-87986851 MS.gene90811:CDS 60.0%
GAAGGTCACCGTGGAGTCTC+TGG + chr1.4:87987180-87987199 MS.gene90811:CDS 60.0%
GACACCTGCACTTGGGGAGA+CGG + chr1.4:87986777-87986796 MS.gene90811:CDS 60.0%
GGCTGAGACACCTGCACTTG+GGG + chr1.4:87986771-87986790 MS.gene90811:CDS 60.0%
GTGGCTGAGACACCTGCACT+TGG + chr1.4:87986769-87986788 MS.gene90811:CDS 60.0%
TCGGCATATCACCGGCGTCA+CGG - chr1.4:87986537-87986556 None:intergenic 60.0%
TCTCAGCCACCGGAGATGCA+CGG - chr1.4:87986759-87986778 None:intergenic 60.0%
!! GCCGGTGATATGCCGACTCT+CGG + chr1.4:87986541-87986560 MS.gene90811:CDS 60.0%
AACGCCGTCTCCCCAAGTGC+AGG - chr1.4:87986784-87986803 None:intergenic 65.0%
CTCACCGTCACGTGCTTCGC+CGG - chr1.4:87986839-87986858 None:intergenic 65.0%
GCATATCACCGGCGTCACGG+CGG - chr1.4:87986534-87986553 None:intergenic 65.0%
GGTCACCGTGGAGTCTCTGG+TGG + chr1.4:87987183-87987202 MS.gene90811:CDS 65.0%
TGGGCTGTGGGGCTTGATGG+TGG + chr1.4:87988161-87988180 MS.gene90811:CDS 65.0%
CAGCCACCGGAGATGCACGG+CGG - chr1.4:87986756-87986775 None:intergenic 70.0%
CGGGGATGGCAGTGAGACGC+CGG + chr1.4:87986606-87986625 MS.gene90811:CDS 70.0%
CACCGGAGATGCACGGCGGC+GGG - chr1.4:87986752-87986771 None:intergenic 75.0%
CCACCGGAGATGCACGGCGG+CGG - chr1.4:87986753-87986772 None:intergenic 75.0%
CTCCCGCCGCCGTGCATCTC+CGG + chr1.4:87986747-87986766 MS.gene90811:CDS 75.0%
TTCACGCGCCGCCGTGACGC+CGG + chr1.4:87986523-87986542 MS.gene90811:CDS 75.0%
! CCGCCGCCGTGCATCTCCGG+TGG + chr1.4:87986750-87986769 MS.gene90811:CDS 80.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 87986457 87988727 87986457 ID=MS.gene90811
chr1.4 mRNA 87986457 87988727 87986457 ID=MS.gene90811.t1;Parent=MS.gene90811
chr1.4 exon 87986457 87988727 87986457 ID=MS.gene90811.t1.exon1;Parent=MS.gene90811.t1
chr1.4 CDS 87986457 87988727 87986457 ID=cds.MS.gene90811.t1;Parent=MS.gene90811.t1
Gene Sequence

>MS.gene90811

ATGTCGGCTCGCATTGTAGCTGAAGATGTTCCCGATTCTTATTTTGATTTTATGGAAATGGACGACTTCACGCGCCGCCGTGACGCCGGTGATATGCCGACTCTCGGACAGCTTCTCAAACACGTTGGAGATGTAAGGAAGGAAGCTATCGGGGATGGCAGTGAGACGCCGGTGCATCACACTCTCGACATCAACGGAATGGAGGTTCGATCACTTCCTTTCGTTCTTTCCTTCAACAACCTTACCTATAGTGTTAAGATACGGCATAAAATGAGTTTCACCGACTTATTCTCCCGCCGCCGTGCATCTCCGGTGGCTGAGACACCTGCACTTGGGGAGACGGCGTTTACAAGAAGTAAGATTCTGCTCAATGACATCTCCGGCGAAGCACGTGACGGTGAGATCATGGCGTTTCTTGGAGCTAGTGGCTCTGGGAAATCAACTCTGATTGATGCTCTAGCAAACAGGATCGCAAAAGGAAAATTGAAAGGAACTGTAAAGCTCAACGGCGAGTCGGTGGAGTCTCGTCTTCTGAAGGTGATTTCTGCCTATGTGATGCAAGATGATCTCCTCTTTCCAATGCTCACAGTGGAAGAAACACTCACCTTTGCCGCGGAATTCCGATTACCGCGATCACTCTCAAAATCAAAGAAAAATGCACGTGTTCAAGCTTTGATTGATCAACTAGGACTCCGCAACGCTGCAAAAACAGTTATCGGAGACGAAGGTCACCGTGGAGTCTCTGGTGGAGAAAGGCGTCGAGTTTCAATCGGAATTGATATAATCCATGATCCAATAGTGCTCTTTCTTGACGAGCCAACTTCAGGATTGGATTCAACAAGTGCTTTCATGGTTGTGAAAGTGCTTCAAAGAATTGCACAAAGTGGAAGCATTGTGATCATGTCAATTCATCAACCAAGTTACAGAATCTTAGGTCTTCTTGATCGTATGATCTTCTTATCACGTGGACAGACAGTTTACAGCGGTTCACCATCGCAGTTACCTTCATACTTTGCAGAATTCGGCCATCCCATACCTGAAGGTGATAACCGAACAGAATTCGCGTTGGACCTGATTCGCGAATTAGAAGGTTCACCTGGAGGAACAAAAAGCTTAGTTGAATTCAACAAATCATGGCAAAGCATGACTAAACTTCACAACAACAATGATGTTTCTTCACATAATGCAATGCCCTCATTATCATTGAAGGAAGCCATCAGCGCCAGCATTTCAAGAGGGAAACTAGTTTCTGGCGCAACAGCAGCTGCAACTAATTCAAATGCAATAGCCACATCACCATCTTCGTCGTCATCCTCAATCGTGCCTACTTATGCAAATCCATTTTGGATTGAGTTATTAACACTTTCAAAGCGTTCAATAACTAATTCAAGGCGAATGCCTGAACTATTTGGGATAAGATTGGGTGCTGTTATGGTAACTGGTTTCATTCTTGCAACAATGTTTTGGCAACTTGACAACTCTCCAAAAGGAGTACAAGAAAGGCTTGGATTCTTTGCTTTTGCTATGTCAACTACTTTTTACACCACCGCAGATGCACTACCAGTTTTCATTCAAGAACGGTTCATTTTCATGAGAGAAACCTCTCACAATGCTTATAGGAGATGGTCCTATGTGATTTCTCATGCTATTGTTGCTTTGCCTGCTTTGTTGTTTCTCTCACTTGCTTTTGCCTGCATAACATTTTGGGCTGTGGGGCTTGATGGTGGATTCTCAGGTTTTTTGTTTTACTTTGTTATCATTCTTGCTTCATTTTGGGCCGGGAATTCGTTCGTTTCATTTCTTTCAGGTGTGGTTCCTCATGTGATGTTGGGTTACACTATTGTGGTTGCAATTCTTGCTTATTTCTTATTGTTCAGTGGGTTCTTTATTAATAGGGATAGAATCCCTGGGTATTGGATTTGGTTCCATTATATGTCATTGGTTAAGTACCCATATGAAGCAGTTCTGCAGAATGAGTTTAGTGATGCAGCTAAGTGTTTTGTGAGGGGGGTGCAGATTTTCGATAACTCACCTCTTGCTTCAGTGTCTGATGCATTGAAGTTGAAATTGTTGGACAGTATGAGTGATACACTAGGAATGAAAATCACAGCGTCTACTTGTTTAACAACTGGTACTGATTTGTTGAAGCAAAATGCGGTGACGGATTTGAGCAAGTGGAATTGTTTGTGGGTAACTGTGGCTTGGGGTTTCTTCTTCAGGATTCTATTCTATATATCTTTGTTGGTGGGTAGCAAGAACAAGAGGAGTTAA
Protein sequence

>MS.gene90811.t1

MSARIVAEDVPDSYFDFMEMDDFTRRRDAGDMPTLGQLLKHVGDVRKEAIGDGSETPVHHTLDINGMEVRSLPFVLSFNNLTYSVKIRHKMSFTDLFSRRRASPVAETPALGETAFTRSKILLNDISGEARDGEIMAFLGASGSGKSTLIDALANRIAKGKLKGTVKLNGESVESRLLKVISAYVMQDDLLFPMLTVEETLTFAAEFRLPRSLSKSKKNARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPSYFAEFGHPIPEGDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKLHNNNDVSSHNAMPSLSLKEAISASISRGKLVSGATAAATNSNAIATSPSSSSSSIVPTYANPFWIELLTLSKRSITNSRRMPELFGIRLGAVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFIQERFIFMRETSHNAYRRWSYVISHAIVALPALLFLSLAFACITFWAVGLDGGFSGFLFYFVIILASFWAGNSFVSFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPGYWIWFHYMSLVKYPYEAVLQNEFSDAAKCFVRGVQIFDNSPLASVSDALKLKLLDSMSDTLGMKITASTCLTTGTDLLKQNAVTDLSKWNCLWVTVAWGFFFRILFYISLLVGSKNKRS