Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90868.t1 | RHN82684.1 | 97.9 | 667 | 12 | 2 | 121 | 786 | 69 | 734 | 0.00E+00 | 1248.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90868.t1 | A0A396JZT7 | 97.9 | 667 | 12 | 2 | 121 | 786 | 69 | 734 | 0.0e+00 | 1248.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82577 | MS.gene90868 | PPI |
| MS.gene90868 | MS.gene80831 | PPI |
| MS.gene90868 | MS.gene98829 | PPI |
| MS.gene90868 | MS.gene05448 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90868.t1 | MTR_1g115260 | 97.608 | 669 | 12 | 2 | 121 | 786 | 69 | 736 | 0.0 | 1325 |
| MS.gene90868.t1 | MTR_6g084190 | 42.645 | 673 | 346 | 7 | 108 | 776 | 47 | 683 | 1.54e-176 | 523 |
| MS.gene90868.t1 | MTR_7g086350 | 30.673 | 639 | 410 | 9 | 153 | 777 | 45 | 664 | 2.41e-98 | 320 |
| MS.gene90868.t1 | MTR_2g007330 | 29.614 | 699 | 411 | 16 | 125 | 783 | 127 | 784 | 4.14e-78 | 268 |
| MS.gene90868.t1 | MTR_7g006750 | 40.411 | 146 | 77 | 1 | 303 | 448 | 562 | 697 | 1.11e-27 | 120 |
| MS.gene90868.t1 | MTR_1g115270 | 79.167 | 48 | 7 | 1 | 66 | 113 | 18 | 62 | 1.10e-18 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90868.t1 | AT5G23390 | 58.921 | 667 | 263 | 4 | 125 | 786 | 69 | 729 | 0.0 | 786 |
| MS.gene90868.t1 | AT1G48840 | 43.870 | 677 | 340 | 7 | 114 | 785 | 48 | 689 | 1.55e-180 | 534 |
| MS.gene90868.t1 | AT3G18350 | 41.106 | 669 | 355 | 5 | 114 | 777 | 48 | 682 | 5.37e-167 | 499 |
| MS.gene90868.t1 | AT3G18350 | 41.106 | 669 | 355 | 5 | 114 | 777 | 48 | 682 | 5.37e-167 | 499 |
| MS.gene90868.t1 | AT3G18350 | 41.106 | 669 | 355 | 5 | 114 | 777 | 48 | 682 | 5.37e-167 | 499 |
| MS.gene90868.t1 | AT2G21720 | 31.610 | 677 | 415 | 14 | 121 | 774 | 75 | 726 | 4.25e-96 | 315 |
| MS.gene90868.t1 | AT2G21720 | 31.563 | 678 | 417 | 14 | 121 | 774 | 75 | 729 | 4.51e-96 | 315 |
| MS.gene90868.t1 | AT1G71240 | 28.736 | 696 | 415 | 15 | 122 | 774 | 139 | 796 | 3.37e-74 | 258 |
| MS.gene90868.t1 | AT1G71240 | 28.223 | 737 | 437 | 17 | 89 | 774 | 100 | 795 | 2.15e-73 | 256 |
| MS.gene90868.t1 | AT1G71240 | 26.610 | 590 | 343 | 16 | 89 | 630 | 100 | 647 | 2.49e-41 | 161 |
Find 165 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAATTTCTGTGTATCTTTA+AGG | 0.055572 | 1.4:+87357152 | None:intergenic |
| AGTACTTGCCAGGGCTAATT+TGG | 0.149646 | 1.4:-87357128 | MS.gene90868:CDS |
| TCCTCCAAAGTACATATTAT+TGG | 0.204918 | 1.4:-87354220 | MS.gene90868:CDS |
| CAGCTATGAAAACTAGAAAT+AGG | 0.206345 | 1.4:+87354259 | None:intergenic |
| GCCGGTAAGGATGGAATTTC+TGG | 0.215703 | 1.4:+87366532 | None:intergenic |
| TTCTGGAAATTTCATCTCTT+TGG | 0.217298 | 1.4:+87366549 | None:intergenic |
| CGCAAGTTCGCTTTAAATTC+AGG | 0.223832 | 1.4:+87357241 | None:intergenic |
| GTTCTACTGCATTTCGATTT+GGG | 0.239473 | 1.4:+87355028 | None:intergenic |
| TCGGAGGATTCAGATGGTTT+TGG | 0.241484 | 1.4:+87369724 | None:intergenic |
| GTGCGGTGGGTTGTGGGTGC+AGG | 0.263872 | 1.4:+87369629 | None:intergenic |
| CCAAGGGGTCCAGTTAATTC+AGG | 0.294876 | 1.4:+87357427 | None:intergenic |
| TGTTCTACTGCATTTCGATT+TGG | 0.299359 | 1.4:+87355027 | None:intergenic |
| CAACCAGTTCTTCAACATAT+TGG | 0.310600 | 1.4:-87358449 | MS.gene90868:CDS |
| TTATTCTAGTTCCACAAATA+TGG | 0.311179 | 1.4:-87359197 | MS.gene90868:CDS |
| TTCCACAAATATGGCAGTTC+AGG | 0.311684 | 1.4:-87359188 | MS.gene90868:intron |
| CGGTACTGGACTTCGGTCTT+TGG | 0.322398 | 1.4:+87362885 | None:intergenic |
| TACAGCTGCTGTGTTATTGC+AGG | 0.328138 | 1.4:+87369762 | None:intergenic |
| ATTTATCATAAACAAGAAAA+TGG | 0.332047 | 1.4:+87358675 | None:intergenic |
| GTTACGTGTGCAGGGTTATC+AGG | 0.338639 | 1.4:-87358562 | MS.gene90868:intron |
| TGCTAACCGACTACAACTTT+TGG | 0.341873 | 1.4:-87356154 | MS.gene90868:CDS |
| GATACCAGACACCGAGGTTT+AGG | 0.352570 | 1.4:-87369681 | MS.gene90868:CDS |
| CTCAAAGTACAGAGCATAAT+TGG | 0.352628 | 1.4:+87357522 | None:intergenic |
| TGGGTTGTGGGTGCAGGGTT+CGG | 0.352664 | 1.4:+87369635 | None:intergenic |
| TTGAAGATTTCCAACAGAAT+TGG | 0.356177 | 1.4:+87358520 | None:intergenic |
| CACAGATTTGTCAGGAAGTT+CGG | 0.358773 | 1.4:-87357175 | MS.gene90868:CDS |
| GTCATAAAACCTGAATTAAC+TGG | 0.374772 | 1.4:-87357436 | MS.gene90868:CDS |
| TGTTTCTGTGCGGTGGGTTG+TGG | 0.381791 | 1.4:+87369622 | None:intergenic |
| AATTCGTTAGGCTGTTTGAC+AGG | 0.383841 | 1.4:+87356987 | None:intergenic |
| ATTCCAATATGTTGAAGAAC+TGG | 0.390982 | 1.4:+87358446 | None:intergenic |
| GTAGTGGCACTCTTCGGTCT+TGG | 0.399094 | 1.4:-87356887 | MS.gene90868:CDS |
| GATGCGCTCACCAATTCTTC+CGG | 0.405340 | 1.4:-87358707 | MS.gene90868:CDS |
| TGAGATTTGTTCTATTTGTT+TGG | 0.408547 | 1.4:-87366467 | MS.gene90868:CDS |
| AAACTCTACCTCGGGGAGAT+AGG | 0.411450 | 1.4:-87357021 | MS.gene90868:CDS |
| ACGAATTCAACTGCTGCTTC+TGG | 0.414117 | 1.4:-87356971 | MS.gene90868:CDS |
| GTACTTGCCAGGGCTAATTT+GGG | 0.414455 | 1.4:-87357127 | MS.gene90868:CDS |
| TCCAGAAATTCCATCCTTAC+CGG | 0.416594 | 1.4:-87366533 | MS.gene90868:CDS |
| GGCAGTAAAACAATCCCTTC+TGG | 0.417122 | 1.4:-87356777 | MS.gene90868:CDS |
| CGTTTGATGTTATGCTTGCT+TGG | 0.418987 | 1.4:-87359400 | MS.gene90868:CDS |
| AGTACAGAGCATAATTGGTC+AGG | 0.424316 | 1.4:+87357527 | None:intergenic |
| TTTGAATCACTTATTCAAGC+TGG | 0.424552 | 1.4:-87354973 | MS.gene90868:CDS |
| GTGCGATTTGAGGATTTAGT+AGG | 0.425776 | 1.4:-87366508 | MS.gene90868:CDS |
| ATGCTCACTTTGAGCGGTAC+TGG | 0.427848 | 1.4:+87362871 | None:intergenic |
| AAGTGATTCAAACTTTGTAA+TGG | 0.429397 | 1.4:+87354984 | None:intergenic |
| GAAAGCTATTCGGTATGATC+TGG | 0.431018 | 1.4:-87357476 | MS.gene90868:CDS |
| GAGATAGTACTTGATGTTGA+TGG | 0.432041 | 1.4:-87358485 | MS.gene90868:CDS |
| GTTTCTGTGCGGTGGGTTGT+GGG | 0.434686 | 1.4:+87369623 | None:intergenic |
| AGCTATGAAAACTAGAAATA+GGG | 0.437514 | 1.4:+87354260 | None:intergenic |
| TCAGGCTTAACGAGTTCAAC+AGG | 0.439071 | 1.4:+87354093 | None:intergenic |
| TCAGGGAATTCAAAGTAAAC+AGG | 0.441197 | 1.4:+87357259 | None:intergenic |
| TACAAATGTTGCAGTTATGA+AGG | 0.441951 | 1.4:-87356693 | MS.gene90868:intron |
| GTATCTCCTTCGGCAGCTCC+TGG | 0.444778 | 1.4:+87369699 | None:intergenic |
| GAAAAGAACCTTACTTATCA+AGG | 0.448588 | 1.4:+87358642 | None:intergenic |
| TTGCTACTTTCTCTCCTACA+TGG | 0.450734 | 1.4:+87354165 | None:intergenic |
| GAGTCTACGTCCGGAAGAAT+TGG | 0.451248 | 1.4:+87358697 | None:intergenic |
| ATCACCAATAATATGTACTT+TGG | 0.452320 | 1.4:+87354216 | None:intergenic |
| TACTGTTGTTTCTGTGCGGT+GGG | 0.453884 | 1.4:+87369616 | None:intergenic |
| CTCAAATCGCACTGCCGGTA+AGG | 0.462068 | 1.4:+87366519 | None:intergenic |
| GCAAGTTCGCTTTAAATTCA+GGG | 0.462657 | 1.4:+87357242 | None:intergenic |
| GGAGAGAAAGTAGCAAAAGA+TGG | 0.463327 | 1.4:-87354158 | MS.gene90868:CDS |
| CGAACTTGCGACGTGACTAC+TGG | 0.464107 | 1.4:-87357228 | MS.gene90868:CDS |
| GTATCCTAAACCTCGGTGTC+TGG | 0.466906 | 1.4:+87369677 | None:intergenic |
| CGGTTAGCAGATTCGATGAC+TGG | 0.467013 | 1.4:+87356168 | None:intergenic |
| AAATGGTCGGCAATAAGTAC+TGG | 0.473092 | 1.4:+87355133 | None:intergenic |
| AACCTGAACTGCCATATTTG+TGG | 0.475661 | 1.4:+87359186 | None:intergenic |
| AATGTTCTGGCCAATTCTGT+TGG | 0.478165 | 1.4:-87358530 | MS.gene90868:CDS |
| CGATGCCCTCCACCTTCACT+TGG | 0.480212 | 1.4:+87356717 | None:intergenic |
| TACTTTGAGTCACTTGGCGT+TGG | 0.481887 | 1.4:-87357508 | MS.gene90868:CDS |
| CTTACCGGCAGTGCGATTTG+AGG | 0.486779 | 1.4:-87366518 | MS.gene90868:CDS |
| TGCGGTGGGTTGTGGGTGCA+GGG | 0.489713 | 1.4:+87369630 | None:intergenic |
| CCTAGCTGAAACTCTACCTC+GGG | 0.490226 | 1.4:-87357029 | MS.gene90868:CDS |
| CCTTCGGCAGCTCCTGGTGT+CGG | 0.495158 | 1.4:+87369705 | None:intergenic |
| AGAAATTAGAAGTACTTGCC+AGG | 0.496232 | 1.4:-87357138 | MS.gene90868:CDS |
| GCAGCAGTAGTGGCACTCTT+CGG | 0.498014 | 1.4:-87356893 | MS.gene90868:CDS |
| ACCAATAATATGTACTTTGG+AGG | 0.498802 | 1.4:+87354219 | None:intergenic |
| ATCAAATAGACGAGCACCAA+GGG | 0.500919 | 1.4:+87357411 | None:intergenic |
| GGATAAGGCGGTTTAGAGAA+TGG | 0.505752 | 1.4:-87354137 | MS.gene90868:CDS |
| GTTTGATGTTATGCTTGCTT+GGG | 0.506925 | 1.4:-87359399 | MS.gene90868:CDS |
| AAACGTGAAACGACGAAACT+CGG | 0.507710 | 1.4:+87359418 | None:intergenic |
| TTCTACTGCATTTCGATTTG+GGG | 0.507842 | 1.4:+87355029 | None:intergenic |
| ATTGGAATTGCCGCATGGCC+TGG | 0.507979 | 1.4:-87358431 | MS.gene90868:intron |
| AAAGTAGCAAAAGATGGATA+AGG | 0.510277 | 1.4:-87354152 | MS.gene90868:CDS |
| TCTGGGCGCAGACATGAAAC+AGG | 0.514494 | 1.4:-87357458 | MS.gene90868:CDS |
| TCAGCAATAAGAATACAAAC+AGG | 0.516154 | 1.4:+87358755 | None:intergenic |
| AAGAAAATGGAGTCTACGTC+CGG | 0.518433 | 1.4:+87358688 | None:intergenic |
| TCGGTGTCTGGTATCTCCTT+CGG | 0.522522 | 1.4:+87369689 | None:intergenic |
| GTGTGCATGAGAAAGCTATT+CGG | 0.523798 | 1.4:-87357486 | MS.gene90868:CDS |
| AATCGCACTGCCGGTAAGGA+TGG | 0.524294 | 1.4:+87366523 | None:intergenic |
| TGGAAAAGCAGAAGCTGCAC+AGG | 0.524943 | 1.4:-87356750 | MS.gene90868:CDS |
| AAGCAGCAGTTGAATTCGTT+AGG | 0.530582 | 1.4:+87356975 | None:intergenic |
| TCTACTTGCTATATTGCCAC+AGG | 0.531443 | 1.4:-87354920 | MS.gene90868:intron |
| GCTCTGTACTTTGAGTCACT+TGG | 0.533288 | 1.4:-87357514 | MS.gene90868:CDS |
| ACAGCTGCTGTGTTATTGCA+GGG | 0.534351 | 1.4:+87369763 | None:intergenic |
| CTTTGAGCGGTACTGGACTT+CGG | 0.535263 | 1.4:+87362878 | None:intergenic |
| CCTGAATTAACTGGACCCCT+TGG | 0.536045 | 1.4:-87357427 | MS.gene90868:CDS |
| AAACAATCCCTTCTGGACAC+TGG | 0.536771 | 1.4:-87356770 | MS.gene90868:CDS |
| TCATTGCAATCATTATGCTC+TGG | 0.538139 | 1.4:-87355104 | MS.gene90868:CDS |
| TTTGTTTGGTTGAGTTTGAG+AGG | 0.539801 | 1.4:-87366453 | MS.gene90868:CDS |
| GTTGATGATAAGAAGACAGT+TGG | 0.540394 | 1.4:-87358803 | MS.gene90868:CDS |
| AAATCCTCAAATCGCACTGC+CGG | 0.541079 | 1.4:+87366514 | None:intergenic |
| ACGAGTTCAACAGGAGCAGC+AGG | 0.541808 | 1.4:+87354102 | None:intergenic |
| AGTTGGTGAGATAAATCCCT+TGG | 0.545390 | 1.4:-87356804 | MS.gene90868:CDS |
| CTTCTTTGAGTGCGCGATAG+CGG | 0.545640 | 1.4:+87357098 | None:intergenic |
| TTTGATTCGGAACTTCCTCT+CGG | 0.547629 | 1.4:-87359539 | MS.gene90868:CDS |
| AAAGCTATTCGGTATGATCT+GGG | 0.549979 | 1.4:-87357475 | MS.gene90868:CDS |
| AGGGTTCGGTTAATCCGTGT+TGG | 0.551048 | 1.4:+87369649 | None:intergenic |
| AAGAGTGCCACTACTGCTGC+AGG | 0.552554 | 1.4:+87356896 | None:intergenic |
| CGATGAAACCGTTGGTGATG+AGG | 0.557119 | 1.4:-87359236 | MS.gene90868:CDS |
| CATCTGAATCCTCCGACACC+AGG | 0.560468 | 1.4:-87369717 | MS.gene90868:CDS |
| GTTCGGTTAATCCGTGTTGG+CGG | 0.560825 | 1.4:+87369652 | None:intergenic |
| AGTGTCTCCTGCAGCAGTAG+TGG | 0.562406 | 1.4:-87356903 | MS.gene90868:CDS |
| TGGCGTAGACATTTCAGAAA+GGG | 0.564583 | 1.4:-87355084 | MS.gene90868:CDS |
| TCGGCAGCTCCTGGTGTCGG+AGG | 0.565146 | 1.4:+87369708 | None:intergenic |
| TAAGAAGACAGTTGGTCTTG+AGG | 0.570923 | 1.4:-87358795 | MS.gene90868:CDS |
| TGTTGAAGAACTGGTTGAGT+CGG | 0.574153 | 1.4:+87358455 | None:intergenic |
| TACGTGCACACAGATTTGTC+AGG | 0.575818 | 1.4:-87357183 | MS.gene90868:CDS |
| CTTGCGACGTGACTACTGGT+TGG | 0.576162 | 1.4:-87357224 | MS.gene90868:CDS |
| ATTCGTTAGGCTGTTTGACA+GGG | 0.576982 | 1.4:+87356988 | None:intergenic |
| AACATATTGGAATTGCCGCA+TGG | 0.579713 | 1.4:-87358436 | MS.gene90868:CDS |
| ACTTGATCAGCATGAACACT+AGG | 0.579984 | 1.4:+87359371 | None:intergenic |
| TCTACTGCATTTCGATTTGG+GGG | 0.582177 | 1.4:+87355030 | None:intergenic |
| TGGCTGATGCTCACTTTGAG+CGG | 0.584560 | 1.4:+87362865 | None:intergenic |
| GAAGATGCCCAAATTAGCCC+TGG | 0.584679 | 1.4:+87357120 | None:intergenic |
| TTACTGTTGTTTCTGTGCGG+TGG | 0.584732 | 1.4:+87369615 | None:intergenic |
| TTGTTTGGTTGAGTTTGAGA+GGG | 0.587511 | 1.4:-87366452 | MS.gene90868:CDS |
| CTGGCGTAGACATTTCAGAA+AGG | 0.588478 | 1.4:-87355085 | MS.gene90868:CDS |
| AAAAGAACCTTACTTATCAA+GGG | 0.589932 | 1.4:+87358643 | None:intergenic |
| CTGGTGTCGGAGGATTCAGA+TGG | 0.595326 | 1.4:+87369718 | None:intergenic |
| GTTGTTTGTGATATCCGAGT+TGG | 0.602375 | 1.4:-87356821 | MS.gene90868:CDS |
| TGCTTACTGTTGTTTCTGTG+CGG | 0.605232 | 1.4:+87369612 | None:intergenic |
| GTTTCATCGTTACTACAAGT+AGG | 0.606383 | 1.4:+87359250 | None:intergenic |
| CCGACACCAGGAGCTGCCGA+AGG | 0.606482 | 1.4:-87369705 | MS.gene90868:CDS |
| CAGCTGCTGTGTTATTGCAG+GGG | 0.612458 | 1.4:+87369764 | None:intergenic |
| GGCGGTCGTATCCTAAACCT+CGG | 0.613138 | 1.4:+87369670 | None:intergenic |
| ACGAGGCCAAAAGTTGTAGT+CGG | 0.613401 | 1.4:+87356148 | None:intergenic |
| ACCTAGCTGAAACTCTACCT+CGG | 0.613726 | 1.4:-87357030 | MS.gene90868:CDS |
| TGAGCGCATCGAAAAGATTG+TGG | 0.615013 | 1.4:+87358720 | None:intergenic |
| TGTGGACCAAGTGAAGGTGG+AGG | 0.616658 | 1.4:-87356723 | MS.gene90868:CDS |
| TGAGATAAATCCCTTGGACG+TGG | 0.618215 | 1.4:-87356798 | MS.gene90868:CDS |
| ACACAAGGGAGATGCCATGT+AGG | 0.618248 | 1.4:-87354179 | MS.gene90868:CDS |
| GTACAGAGCATAATTGGTCA+GGG | 0.621579 | 1.4:+87357528 | None:intergenic |
| GAAATTAGAAGTACTTGCCA+GGG | 0.622596 | 1.4:-87357137 | MS.gene90868:CDS |
| GGCAACTGTGGACCAAGTGA+AGG | 0.624655 | 1.4:-87356729 | MS.gene90868:CDS |
| AACTGTGGACCAAGTGAAGG+TGG | 0.625377 | 1.4:-87356726 | MS.gene90868:CDS |
| GGTTAGCAGATTCGATGACT+GGG | 0.635781 | 1.4:+87356169 | None:intergenic |
| CGTAGACATTTCAGAAAGGG+AGG | 0.636982 | 1.4:-87355081 | MS.gene90868:CDS |
| AGAAGCTGCACAGGCAACTG+TGG | 0.637250 | 1.4:-87356741 | MS.gene90868:CDS |
| CCCGAGGTAGAGTTTCAGCT+AGG | 0.640810 | 1.4:+87357029 | None:intergenic |
| GTGGACCAAGTGAAGGTGGA+GGG | 0.641291 | 1.4:-87356722 | MS.gene90868:CDS |
| TTAGGATACGACCGCCAACA+CGG | 0.648502 | 1.4:-87369663 | MS.gene90868:CDS |
| AAAAGCTCTTTCACTCCGAG+AGG | 0.651460 | 1.4:+87359524 | None:intergenic |
| AGCATCATCCTCATCACCAA+CGG | 0.651464 | 1.4:+87359228 | None:intergenic |
| TGTAGTAACGATGAAACCGT+TGG | 0.663360 | 1.4:-87359244 | MS.gene90868:CDS |
| TATCAAATAGACGAGCACCA+AGG | 0.663449 | 1.4:+87357410 | None:intergenic |
| GTAGCAAAAGATGGATAAGG+CGG | 0.664723 | 1.4:-87354149 | MS.gene90868:CDS |
| AGGGATTTATCTCACCAACT+CGG | 0.677132 | 1.4:+87356807 | None:intergenic |
| GAAATACTCACCAGGCCATG+CGG | 0.677568 | 1.4:+87358421 | None:intergenic |
| TAAACGAACAAAATTCAACA+AGG | 0.696080 | 1.4:+87359486 | None:intergenic |
| TATTCATCGAGTGTTACACA+AGG | 0.697962 | 1.4:-87354194 | MS.gene90868:CDS |
| TAAGGCGGTTTAGAGAATGG+TGG | 0.706781 | 1.4:-87354134 | MS.gene90868:CDS |
| TCAAATAGACGAGCACCAAG+GGG | 0.719250 | 1.4:+87357412 | None:intergenic |
| ATTCATCGAGTGTTACACAA+GGG | 0.728416 | 1.4:-87354193 | MS.gene90868:CDS |
| TGCAAGATCCTATCTCCCCG+AGG | 0.734645 | 1.4:+87357013 | None:intergenic |
| CTAGCTGAAACTCTACCTCG+GGG | 0.754230 | 1.4:-87357028 | MS.gene90868:CDS |
| TCTATAGAAGTCTTTCCACG+AGG | 0.763515 | 1.4:+87356131 | None:intergenic |
| GAAGGAGATACCAGACACCG+AGG | 0.790237 | 1.4:-87369687 | MS.gene90868:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 87354071 | 87372720 | 87354071 | ID=MS.gene90868 |
| chr1.4 | mRNA | 87354071 | 87372720 | 87354071 | ID=MS.gene90868.t1;Parent=MS.gene90868 |
| chr1.4 | exon | 87372709 | 87372720 | 87372709 | ID=MS.gene90868.t1.exon1;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87372709 | 87372720 | 87372709 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87369619 | 87369806 | 87369619 | ID=MS.gene90868.t1.exon2;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87369619 | 87369806 | 87369619 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87366444 | 87366582 | 87366444 | ID=MS.gene90868.t1.exon3;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87366444 | 87366582 | 87366444 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87362879 | 87362916 | 87362879 | ID=MS.gene90868.t1.exon4;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87362879 | 87362916 | 87362879 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87359373 | 87359598 | 87359373 | ID=MS.gene90868.t1.exon5;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87359373 | 87359598 | 87359373 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87359189 | 87359278 | 87359189 | ID=MS.gene90868.t1.exon6;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87359189 | 87359278 | 87359189 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87358656 | 87358825 | 87358656 | ID=MS.gene90868.t1.exon7;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87358656 | 87358825 | 87358656 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87358432 | 87358571 | 87358432 | ID=MS.gene90868.t1.exon8;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87358432 | 87358571 | 87358432 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87357382 | 87357559 | 87357382 | ID=MS.gene90868.t1.exon9;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87357382 | 87357559 | 87357382 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87356694 | 87357288 | 87356694 | ID=MS.gene90868.t1.exon10;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87356694 | 87357288 | 87356694 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87356090 | 87356202 | 87356090 | ID=MS.gene90868.t1.exon11;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87356090 | 87356202 | 87356090 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87354921 | 87355164 | 87354921 | ID=MS.gene90868.t1.exon12;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87354921 | 87355164 | 87354921 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| chr1.4 | exon | 87354071 | 87354298 | 87354071 | ID=MS.gene90868.t1.exon13;Parent=MS.gene90868.t1 |
| chr1.4 | CDS | 87354071 | 87354298 | 87354071 | ID=cds.MS.gene90868.t1;Parent=MS.gene90868.t1 |
| Gene Sequence |
| Protein sequence |
