Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90986.t1 | XP_013443338.1 | 98.2 | 513 | 9 | 0 | 1 | 513 | 1 | 513 | 2.10E-276 | 961.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90986.t1 | Q4FE45 | 71.0 | 520 | 137 | 8 | 1 | 513 | 1 | 513 | 3.6e-192 | 672.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90986.t1 | G7ZV34 | 98.2 | 513 | 9 | 0 | 1 | 513 | 1 | 513 | 1.5e-276 | 961.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055277 | MS.gene90986 | -0.803595 | 3.23E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90986.t1 | MTR_0020s0130 | 98.246 | 513 | 9 | 0 | 1 | 513 | 1 | 513 | 0.0 | 1045 |
| MS.gene90986.t1 | MTR_1g100797 | 83.431 | 513 | 84 | 1 | 1 | 513 | 1 | 512 | 0.0 | 889 |
| MS.gene90986.t1 | MTR_1g100797 | 81.663 | 409 | 74 | 1 | 105 | 513 | 1 | 408 | 0.0 | 696 |
| MS.gene90986.t1 | MTR_4g129470 | 58.809 | 403 | 151 | 5 | 1 | 396 | 7 | 401 | 8.29e-163 | 471 |
| MS.gene90986.t1 | MTR_4g129470 | 54.517 | 321 | 131 | 5 | 83 | 396 | 1 | 313 | 1.94e-115 | 347 |
| MS.gene90986.t1 | MTR_2g096760 | 30.088 | 452 | 236 | 12 | 1 | 421 | 1 | 403 | 5.17e-43 | 159 |
| MS.gene90986.t1 | MTR_4g063830 | 31.910 | 398 | 210 | 12 | 5 | 372 | 6 | 372 | 2.13e-41 | 154 |
| MS.gene90986.t1 | MTR_4g021880 | 27.481 | 393 | 224 | 9 | 14 | 375 | 101 | 463 | 6.96e-32 | 129 |
| MS.gene90986.t1 | MTR_4g021880 | 32.468 | 231 | 129 | 2 | 47 | 277 | 134 | 337 | 2.76e-25 | 108 |
| MS.gene90986.t1 | MTR_1g089180 | 28.218 | 202 | 116 | 6 | 47 | 245 | 255 | 430 | 2.03e-14 | 75.9 |
| MS.gene90986.t1 | MTR_6g027840 | 29.108 | 213 | 108 | 5 | 49 | 261 | 181 | 350 | 1.53e-13 | 73.6 |
| MS.gene90986.t1 | MTR_6g027840 | 27.273 | 275 | 157 | 7 | 7 | 260 | 217 | 469 | 1.06e-11 | 67.8 |
| MS.gene90986.t1 | MTR_4g116160 | 29.412 | 238 | 120 | 7 | 9 | 244 | 35 | 226 | 4.18e-13 | 72.4 |
| MS.gene90986.t1 | MTR_4g116160 | 29.412 | 238 | 120 | 7 | 9 | 244 | 35 | 226 | 4.43e-13 | 72.0 |
| MS.gene90986.t1 | MTR_7g100390 | 28.516 | 256 | 138 | 9 | 14 | 266 | 53 | 266 | 6.40e-12 | 68.2 |
| MS.gene90986.t1 | MTR_4g062100 | 28.821 | 229 | 120 | 6 | 17 | 244 | 112 | 298 | 1.04e-11 | 67.8 |
| MS.gene90986.t1 | MTR_5g026800 | 35.484 | 124 | 78 | 2 | 8 | 131 | 9 | 130 | 5.38e-11 | 63.5 |
| MS.gene90986.t1 | MTR_5g043640 | 40.698 | 86 | 50 | 1 | 47 | 132 | 92 | 176 | 9.37e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90986.t1 | AT5G07270 | 71.731 | 520 | 133 | 8 | 1 | 513 | 1 | 513 | 0.0 | 746 |
| MS.gene90986.t1 | AT5G57740 | 57.292 | 384 | 151 | 4 | 1 | 379 | 7 | 382 | 8.46e-145 | 426 |
| MS.gene90986.t1 | AT2G28840 | 29.975 | 407 | 222 | 12 | 1 | 376 | 1 | 375 | 5.99e-38 | 145 |
| MS.gene90986.t1 | AT2G28840 | 29.619 | 341 | 178 | 11 | 66 | 376 | 53 | 361 | 7.44e-27 | 113 |
| MS.gene90986.t1 | AT3G12360 | 31.878 | 229 | 128 | 10 | 3 | 217 | 114 | 328 | 1.16e-13 | 73.9 |
| MS.gene90986.t1 | AT3G12360 | 31.878 | 229 | 128 | 10 | 3 | 217 | 126 | 340 | 1.53e-13 | 73.6 |
| MS.gene90986.t1 | AT3G04710 | 30.045 | 223 | 124 | 6 | 49 | 261 | 283 | 483 | 4.49e-13 | 72.4 |
| MS.gene90986.t1 | AT3G04710 | 30.045 | 223 | 124 | 6 | 49 | 261 | 59 | 259 | 7.01e-13 | 71.2 |
| MS.gene90986.t1 | AT5G02620 | 26.744 | 258 | 113 | 7 | 17 | 273 | 98 | 280 | 7.84e-13 | 71.2 |
| MS.gene90986.t1 | AT5G02620 | 26.744 | 258 | 113 | 7 | 17 | 273 | 98 | 280 | 7.84e-13 | 71.2 |
| MS.gene90986.t1 | AT5G02620 | 26.744 | 258 | 113 | 7 | 17 | 273 | 98 | 280 | 7.84e-13 | 71.2 |
| MS.gene90986.t1 | AT5G02620 | 27.027 | 259 | 134 | 8 | 17 | 273 | 98 | 303 | 3.46e-12 | 69.3 |
| MS.gene90986.t1 | AT5G02620 | 27.027 | 259 | 134 | 8 | 17 | 273 | 98 | 303 | 3.46e-12 | 69.3 |
| MS.gene90986.t1 | AT4G19150 | 38.655 | 119 | 71 | 2 | 14 | 132 | 20 | 136 | 3.48e-12 | 67.0 |
| MS.gene90986.t1 | AT2G31820 | 27.444 | 266 | 148 | 9 | 14 | 276 | 193 | 416 | 6.10e-12 | 68.6 |
| MS.gene90986.t1 | AT5G60070 | 25.974 | 308 | 181 | 10 | 1 | 280 | 23 | 311 | 3.62e-11 | 65.9 |
Find 0 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAACTAATATATAACA+TGG | - | 8272:44973-44992 | None:intergenic | 10.0% |
| !! | TCAATAATAAAAATTACAAA+CGG | + | 8272:43471-43490 | MS.gene90986:intron | 10.0% |
| !!! | ACTTAATAATAGAATTTTAT+TGG | - | 8272:41401-41420 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTGATTTTATATA+TGG | + | 8272:40171-40190 | MS.gene90986:intron | 10.0% |
| !! | AAAACATTAAAGAATCAAAA+AGG | - | 8272:40052-40071 | None:intergenic | 15.0% |
| !! | AAACATTAAAGAATCAAAAA+GGG | - | 8272:40051-40070 | None:intergenic | 15.0% |
| !! | AAATAACTAGATTAAATTAC+AGG | + | 8272:41772-41791 | MS.gene90986:intron | 15.0% |
| !! | AATAAAAAATAAAACTAAGG+TGG | - | 8272:45001-45020 | None:intergenic | 15.0% |
| !! | ATCATATATATGTAACAAAA+AGG | - | 8272:40997-41016 | None:intergenic | 15.0% |
| !! | ATCATCTTAAAATTTAAACT+AGG | - | 8272:44664-44683 | None:intergenic | 15.0% |
| !! | CAATAATAAAAATTACAAAC+GGG | + | 8272:43472-43491 | MS.gene90986:intron | 15.0% |
| !! | GACATAAAAAATATGAATTT+AGG | - | 8272:45081-45100 | None:intergenic | 15.0% |
| !! | GTTTAATAATTCTTCAAATT+TGG | - | 8272:44882-44901 | None:intergenic | 15.0% |
| !! | TAACAATAATATCATAAACT+CGG | - | 8272:44529-44548 | None:intergenic | 15.0% |
| !! | TGAAGAATTATTAAACTAAA+CGG | + | 8272:44886-44905 | MS.gene90986:intron | 15.0% |
| !! | TTAAAAGTAGAACATATAAT+AGG | - | 8272:45041-45060 | None:intergenic | 15.0% |
| !!! | ACATTAAAACCATTATATTT+TGG | + | 8272:40357-40376 | MS.gene90986:intron | 15.0% |
| !!! | AGTATATTTTCATATTTACA+TGG | + | 8272:41262-41281 | MS.gene90986:intron | 15.0% |
| !!! | GGTAAAATTTTAATTTTTTG+TGG | + | 8272:40145-40164 | MS.gene90986:intron | 15.0% |
| !!! | TAATTTTCATGATATGATAA+CGG | + | 8272:40464-40483 | MS.gene90986:intron | 15.0% |
| !!! | TTTATTTTATCTTTTGCTAT+AGG | - | 8272:42978-42997 | None:intergenic | 15.0% |
| !!! | TTTGATTGATTTAAGTTTTA+TGG | + | 8272:40197-40216 | MS.gene90986:intron | 15.0% |
| !!! | TTTTTGATTCTTTAATGTTT+TGG | + | 8272:40051-40070 | MS.gene90986:intron | 15.0% |
| !! | AAAAGACAAAGAAATCAAAA+GGG | - | 8272:39983-40002 | None:intergenic | 20.0% |
| !! | AAACAATGTTGCAAAATATT+GGG | + | 8272:43506-43525 | MS.gene90986:intron | 20.0% |
| !! | AAATGGAAATAAGATTGATT+TGG | + | 8272:44216-44235 | MS.gene90986:intron | 20.0% |
| !! | AACATCAAGAATCATATATT+AGG | - | 8272:44158-44177 | None:intergenic | 20.0% |
| !! | ACAAATCTCAAAATTATTCA+CGG | + | 8272:41462-41481 | MS.gene90986:intron | 20.0% |
| !! | AGAAGATAACAGAAATATTT+AGG | - | 8272:44188-44207 | None:intergenic | 20.0% |
| !! | ATAATTCTTCAAATTTGGAT+TGG | - | 8272:44877-44896 | None:intergenic | 20.0% |
| !! | ATAGAAATCTGACAAATAAA+AGG | + | 8272:41526-41545 | MS.gene90986:intron | 20.0% |
| !! | ATCAGCTAAACATAAAATAT+AGG | - | 8272:42015-42034 | None:intergenic | 20.0% |
| !! | ATTTAGCAAATCATATTCTT+AGG | - | 8272:41022-41041 | None:intergenic | 20.0% |
| !! | GAAATTAGTCCAAAATATAA+TGG | - | 8272:40369-40388 | None:intergenic | 20.0% |
| !! | GTAAAAAAACCATTATATTG+TGG | + | 8272:40576-40595 | MS.gene90986:intron | 20.0% |
| !! | TGTTAAAAAAAACGTCATTT+AGG | + | 8272:44018-44037 | MS.gene90986:intron | 20.0% |
| !! | TTAAAACTGAGTTTATTAGT+GGG | + | 8272:44577-44596 | MS.gene90986:intron | 20.0% |
| !!! | AATATCTTTAATGTTTTCCT+CGG | + | 8272:42901-42920 | MS.gene90986:intron | 20.0% |
| !!! | AATCACATATTTTTAAGGTA+TGG | - | 8272:43699-43718 | None:intergenic | 20.0% |
| !!! | CATTTATTTCTGAATTACAT+TGG | - | 8272:45716-45735 | None:intergenic | 20.0% |
| !!! | GCAAAAATCACATATTTTTA+AGG | - | 8272:43704-43723 | None:intergenic | 20.0% |
| !!! | GCTAAATGAGATTTTAATTT+CGG | + | 8272:41035-41054 | MS.gene90986:intron | 20.0% |
| !!! | TGATTTTCATGATATGATTA+TGG | + | 8272:40239-40258 | MS.gene90986:intron | 20.0% |
| !!! | TTATTGACTATAAAAATACC+TGG | - | 8272:43450-43469 | None:intergenic | 20.0% |
| !!! | TTGTTTGATTTTATATATGG+TGG | + | 8272:40174-40193 | MS.gene90986:intron | 20.0% |
| ! | AAAAATGAGCTTATGAAAAC+AGG | + | 8272:44608-44627 | MS.gene90986:intron | 25.0% |
| ! | AAAATGAGCTTATGAAAACA+GGG | + | 8272:44609-44628 | MS.gene90986:intron | 25.0% |
| ! | AACACTATTTATAGTCAACA+TGG | - | 8272:42468-42487 | None:intergenic | 25.0% |
| ! | AACATGGGATTATAACTTTA+TGG | - | 8272:44460-44479 | None:intergenic | 25.0% |
| ! | AAGTCATATTTCATCAAATG+CGG | - | 8272:44780-44799 | None:intergenic | 25.0% |
| ! | ACATGGGATTATAACTTTAT+GGG | - | 8272:44459-44478 | None:intergenic | 25.0% |
| ! | ACTAGTAGATATAAGTCATA+GGG | - | 8272:43823-43842 | None:intergenic | 25.0% |
| ! | ATATCATTATGGAACATCAA+TGG | + | 8272:42713-42732 | MS.gene90986:CDS | 25.0% |
| ! | ATGTGCTATGCATTAATATA+GGG | + | 8272:42816-42835 | MS.gene90986:intron | 25.0% |
| ! | CAAAAAGAAAAAACGAACAA+AGG | + | 8272:41957-41976 | MS.gene90986:CDS | 25.0% |
| ! | CAATGTTATACAACATCTAA+AGG | - | 8272:43863-43882 | None:intergenic | 25.0% |
| ! | CTTAAAACTGAGTTTATTAG+TGG | + | 8272:44576-44595 | MS.gene90986:intron | 25.0% |
| ! | GAAAAGACAAAGAAATCAAA+AGG | - | 8272:39984-40003 | None:intergenic | 25.0% |
| ! | GAAACAATGTTGCAAAATAT+TGG | + | 8272:43505-43524 | MS.gene90986:intron | 25.0% |
| ! | TAGGAAAAATAATTGTGCTT+CGG | - | 8272:44139-44158 | None:intergenic | 25.0% |
| ! | TATATTAATGCATAGCACAT+CGG | - | 8272:42816-42835 | None:intergenic | 25.0% |
| ! | TATGAATTTAGGTCTATGTT+TGG | - | 8272:45070-45089 | None:intergenic | 25.0% |
| ! | TCAAAGCTGTCTATAAATAA+AGG | - | 8272:41072-41091 | None:intergenic | 25.0% |
| ! | TCAAGATTCAAATTGTGAAT+TGG | + | 8272:41319-41338 | MS.gene90986:intron | 25.0% |
| ! | TCATATCCAGGTTAAAATAA+AGG | - | 8272:40621-40640 | None:intergenic | 25.0% |
| ! | TTGTAAATGAGTTTATGAGT+GGG | + | 8272:44798-44817 | MS.gene90986:intron | 25.0% |
| !! | AAATGTAACTAGCCAATTTT+AGG | - | 8272:40826-40845 | None:intergenic | 25.0% |
| !! | AAATTTCATTCTGAGAATCA+TGG | + | 8272:41288-41307 | MS.gene90986:intron | 25.0% |
| !! | AACATGTTCAAGTATGTTTT+GGG | + | 8272:45665-45684 | MS.gene90986:CDS | 25.0% |
| !! | AACGACAAATAATTTGAAGT+AGG | - | 8272:43401-43420 | None:intergenic | 25.0% |
| !! | AAGAAACAACGAAATAGTTT+TGG | + | 8272:43548-43567 | MS.gene90986:intron | 25.0% |
| !! | AATTTAAAACCATGATAGTC+GGG | - | 8272:42306-42325 | None:intergenic | 25.0% |
| !! | ACGACAAATAATTTGAAGTA+GGG | - | 8272:43400-43419 | None:intergenic | 25.0% |
| !! | AGAAACAACGAAATAGTTTT+GGG | + | 8272:43549-43568 | MS.gene90986:intron | 25.0% |
| !! | ATATGATTATGGTTTCAAGT+TGG | + | 8272:40250-40269 | MS.gene90986:intron | 25.0% |
| !! | CAATTTAAAACCATGATAGT+CGG | - | 8272:42307-42326 | None:intergenic | 25.0% |
| !! | CTAAGCTAATATTTTACACA+TGG | + | 8272:44929-44948 | MS.gene90986:intron | 25.0% |
| !! | TATTTGAGGTTATCTACTAA+TGG | - | 8272:43103-43122 | None:intergenic | 25.0% |
| !! | TCTCGGTTTTCTTTTATATA+TGG | + | 8272:40396-40415 | MS.gene90986:intron | 25.0% |
| !! | TTTTATGTTTCAGCGAAATA+CGG | + | 8272:42349-42368 | MS.gene90986:intron | 25.0% |
| !!! | AAAAAGGGTGTTAATCAAAA+TGG | - | 8272:40036-40055 | None:intergenic | 25.0% |
| !!! | AATTTTGATTGAGTTGAGAT+AGG | + | 8272:41724-41743 | MS.gene90986:intron | 25.0% |
| !!! | ACTATCATGGTTTTAAATTG+TGG | + | 8272:42307-42326 | MS.gene90986:intron | 25.0% |
| !!! | ATCTAGTTATTTTTGACACA+CGG | - | 8272:41764-41783 | None:intergenic | 25.0% |
| !!! | ATGTCTAGTCTTTAATTTGA+GGG | + | 8272:44739-44758 | MS.gene90986:intron | 25.0% |
| !!! | ATTTTGATTGAGTTGAGATA+GGG | + | 8272:41725-41744 | MS.gene90986:intron | 25.0% |
| !!! | CATATTTTTAAGGTATGGAA+TGG | - | 8272:43694-43713 | None:intergenic | 25.0% |
| !!! | GCAATTTATTTTCTTTTGGT+TGG | - | 8272:45344-45363 | None:intergenic | 25.0% |
| !!! | GCATGCAATTTATTTTCTTT+TGG | - | 8272:45348-45367 | None:intergenic | 25.0% |
| AAAAGAAAACCGAGATATGA+TGG | - | 8272:40391-40410 | None:intergenic | 30.0% | |
| AAATCTGACAAATAAAAGGC+TGG | + | 8272:41530-41549 | MS.gene90986:intron | 30.0% | |
| AACCAGTATTAATCATATCC+AGG | - | 8272:40633-40652 | None:intergenic | 30.0% | |
| AACCTGGATATGATTAATAC+TGG | + | 8272:40628-40647 | MS.gene90986:intron | 30.0% | |
| AAGTCATATCTAATCCAATG+TGG | - | 8272:44559-44578 | None:intergenic | 30.0% | |
| AAGTCGAAAACTAAGTGATA+AGG | - | 8272:40777-40796 | None:intergenic | 30.0% | |
| AATGGGTAAGATATTGTGAA+TGG | + | 8272:43216-43235 | MS.gene90986:intron | 30.0% | |
| ACAAATGACTGTTAGCATTT+AGG | - | 8272:45121-45140 | None:intergenic | 30.0% | |
| ACTCGAAGAAAAATTAAGCA+TGG | - | 8272:42232-42251 | None:intergenic | 30.0% | |
| AGTCATATCTAATCCAATGT+GGG | - | 8272:44558-44577 | None:intergenic | 30.0% | |
| AGTCATATTTCATCAAATGC+GGG | - | 8272:44779-44798 | None:intergenic | 30.0% | |
| AGTCGAAAACTAAGTGATAA+GGG | - | 8272:40776-40795 | None:intergenic | 30.0% | |
| ATAACTGAAAGACTGAGAAA+AGG | - | 8272:41172-41191 | None:intergenic | 30.0% | |
| ATGAAAGCAGATTATCTAAG+TGG | + | 8272:41797-41816 | MS.gene90986:CDS | 30.0% | |
| ATGAAATTTACACGATGAAG+AGG | - | 8272:41992-42011 | None:intergenic | 30.0% | |
| ATTACATCTGTAGAGCATAA+GGG | - | 8272:41134-41153 | None:intergenic | 30.0% | |
| CAATTCACGATTCAGAAAAT+AGG | - | 8272:41349-41368 | None:intergenic | 30.0% | |
| CTAGTAGATATAAGTCATAG+GGG | - | 8272:43822-43841 | None:intergenic | 30.0% | |
| CTCTCTTTCTCATAATACAT+CGG | + | 8272:45422-45441 | MS.gene90986:CDS | 30.0% | |
| CTTGTAAATGAGTTTATGAG+TGG | + | 8272:44797-44816 | MS.gene90986:intron | 30.0% | |
| GACATTCTCGATAATATTTC+TGG | - | 8272:44069-44088 | None:intergenic | 30.0% | |
| GACTAATTTCCATCATATCT+CGG | + | 8272:40379-40398 | MS.gene90986:intron | 30.0% | |
| GACTAGTAGATATAAGTCAT+AGG | - | 8272:43824-43843 | None:intergenic | 30.0% | |
| GATGTGCTATGCATTAATAT+AGG | + | 8272:42815-42834 | MS.gene90986:intron | 30.0% | |
| GCTATTTATTTACTTCATGC+CGG | + | 8272:42501-42520 | MS.gene90986:intron | 30.0% | |
| GCTATTTATTTACTTCATGC+TGG | + | 8272:42501-42520 | MS.gene90986:intron | 30.0% | |
| TAACTGAAAGACTGAGAAAA+GGG | - | 8272:41171-41190 | None:intergenic | 30.0% | |
| TAGCATTTAGGTAGATAAGT+CGG | - | 8272:45109-45128 | None:intergenic | 30.0% | |
| TAGTAGATATAAGTCATAGG+GGG | - | 8272:43821-43840 | None:intergenic | 30.0% | |
| TCTTGCAATTAAAGGGATAA+TGG | + | 8272:40708-40727 | MS.gene90986:intron | 30.0% | |
| TGAAAGCAGATTATCTAAGT+GGG | + | 8272:41798-41817 | MS.gene90986:CDS | 30.0% | |
| TGAATTCAAGGAACTATTGT+GGG | + | 8272:40120-40139 | MS.gene90986:CDS | 30.0% | |
| TGCTTCGGAAATCATATAAT+AGG | - | 8272:44124-44143 | None:intergenic | 30.0% | |
| TGGAAATATATCCATTGTCT+TGG | + | 8272:40799-40818 | MS.gene90986:intron | 30.0% | |
| TGGATATGATTAATACTGGT+TGG | + | 8272:40632-40651 | MS.gene90986:intron | 30.0% | |
| TGTGCTATGCATTAATATAG+GGG | + | 8272:42817-42836 | MS.gene90986:intron | 30.0% | |
| TTATACTACAGACACTATTG+CGG | + | 8272:42422-42441 | MS.gene90986:intron | 30.0% | |
| TTATGAAAACAGGGTAAATC+TGG | + | 8272:44618-44637 | MS.gene90986:intron | 30.0% | |
| ! | ACATGTTCAAGTATGTTTTG+GGG | + | 8272:45666-45685 | MS.gene90986:CDS | 30.0% |
| ! | ATCGTACAATTTTCTGATCT+TGG | + | 8272:43629-43648 | MS.gene90986:intron | 30.0% |
| ! | ATCTTATTTCCATTTGCATC+AGG | - | 8272:44211-44230 | None:intergenic | 30.0% |
| ! | CAACATGTTCAAGTATGTTT+TGG | + | 8272:45664-45683 | MS.gene90986:CDS | 30.0% |
| ! | CGGTTTTCTTTTATATATGG+TGG | + | 8272:40399-40418 | MS.gene90986:intron | 30.0% |
| ! | CTTGCAAAATACTCAACTTT+TGG | + | 8272:39895-39914 | MS.gene90986:CDS | 30.0% |
| ! | CTTGTCTTAGAGTATCATAT+TGG | + | 8272:40866-40885 | MS.gene90986:intron | 30.0% |
| ! | GGAACATCAATGGATTTAAT+AGG | + | 8272:42723-42742 | MS.gene90986:CDS | 30.0% |
| ! | TATTTTACACATGGACGTAA+CGG | + | 8272:44938-44957 | MS.gene90986:intron | 30.0% |
| ! | TGAATTCCAGTGTTGAAAAA+TGG | + | 8272:40655-40674 | MS.gene90986:intron | 30.0% |
| ! | TGATGAACAATACAAGTTGA+AGG | + | 8272:41198-41217 | MS.gene90986:intron | 30.0% |
| !! | AAGAGCATCGTTAAAAGATT+TGG | - | 8272:43144-43163 | None:intergenic | 30.0% |
| !! | AATGATGTGGGATTTGTTTT+TGG | + | 8272:43964-43983 | MS.gene90986:intron | 30.0% |
| !! | ACTAGAAATTCGTATCGATT+GGG | + | 8272:41698-41717 | MS.gene90986:intron | 30.0% |
| !! | AGAGCATCGTTAAAAGATTT+GGG | - | 8272:43143-43162 | None:intergenic | 30.0% |
| !! | CAAATTTAATTTTTCCCCTC+AGG | + | 8272:43285-43304 | MS.gene90986:intron | 30.0% |
| !! | CAATATGATACTCTAAGACA+AGG | - | 8272:40868-40887 | None:intergenic | 30.0% |
| !! | GATGTCTAGTCTTTAATTTG+AGG | + | 8272:44738-44757 | MS.gene90986:intron | 30.0% |
| !! | GTTTTCATTCTCTTTGAGAA+CGG | + | 8272:44499-44518 | MS.gene90986:intron | 30.0% |
| !! | TATGATAACGGTTTGAAAGT+CGG | + | 8272:40476-40495 | MS.gene90986:intron | 30.0% |
| !! | TCACTTAGTTTTCGACTTTT+TGG | + | 8272:40779-40798 | MS.gene90986:intron | 30.0% |
| !! | TTTTCATTCTCTTTGAGAAC+GGG | + | 8272:44500-44519 | MS.gene90986:intron | 30.0% |
| !! | TTTTCTTTTGGTTGGAAACT+TGG | - | 8272:45336-45355 | None:intergenic | 30.0% |
| !!! | AACTGCAATTTTAACTGCAT+CGG | - | 8272:42385-42404 | None:intergenic | 30.0% |
| !!! | ATGGTTTTAAATTGTGGTTG+CGG | + | 8272:42313-42332 | MS.gene90986:intron | 30.0% |
| AATGTCTCCCTATTACAAAC+CGG | - | 8272:44845-44864 | None:intergenic | 35.0% | |
| ACAGATCAGGATAAAATGGA+AGG | + | 8272:45624-45643 | MS.gene90986:CDS | 35.0% | |
| ACTAGGGATAAGAAATGACA+CGG | - | 8272:40688-40707 | None:intergenic | 35.0% | |
| AGATAATTCCATGTCGACAA+AGG | - | 8272:45299-45318 | None:intergenic | 35.0% | |
| AGGTATTACTGCACTTCATA+TGG | + | 8272:42620-42639 | MS.gene90986:CDS | 35.0% | |
| AGTTGCTATGTACACAAAGT+GGG | - | 8272:43738-43757 | None:intergenic | 35.0% | |
| ATAATTCCATGTCGACAAAG+GGG | - | 8272:45297-45316 | None:intergenic | 35.0% | |
| ATCGGAAATTCGAAAAAACC+GGG | + | 8272:45440-45459 | MS.gene90986:CDS | 35.0% | |
| ATCTTGTGTTTCATCTTCAC+CGG | - | 8272:45574-45593 | None:intergenic | 35.0% | |
| ATGCATTTCAGAAGAAACGT+TGG | - | 8272:45250-45269 | None:intergenic | 35.0% | |
| ATTTACACGATGAAGAGGAA+TGG | - | 8272:41987-42006 | None:intergenic | 35.0% | |
| CACTATTCACTACCAAAACT+TGG | - | 8272:41561-41580 | None:intergenic | 35.0% | |
| CATCGGAAATTCGAAAAAAC+CGG | + | 8272:45439-45458 | MS.gene90986:CDS | 35.0% | |
| CATTACATCTGTAGAGCATA+AGG | - | 8272:41135-41154 | None:intergenic | 35.0% | |
| CATTGTCTTGGTCCTAAAAT+TGG | + | 8272:40811-40830 | MS.gene90986:intron | 35.0% | |
| CCCTTTAATTGCAAGAACTA+GGG | - | 8272:40704-40723 | None:intergenic | 35.0% | |
| CGACTTATGCCACAATATAA+TGG | - | 8272:40588-40607 | None:intergenic | 35.0% | |
| CGATGTATTATGAGAAAGAG+AGG | - | 8272:45424-45443 | None:intergenic | 35.0% | |
| CGGTTCAAGTCATAAAGTAA+AGG | + | 8272:41482-41501 | MS.gene90986:intron | 35.0% | |
| CTTATTTCCACAAGCTCTTT+AGG | - | 8272:43045-43064 | None:intergenic | 35.0% | |
| GACTACAGATCAGGATAAAA+TGG | + | 8272:45620-45639 | MS.gene90986:CDS | 35.0% | |
| GATAATTCCATGTCGACAAA+GGG | - | 8272:45298-45317 | None:intergenic | 35.0% | |
| GCACACAATAGAAATGATGT+GGG | + | 8272:43952-43971 | MS.gene90986:intron | 35.0% | |
| GTGAATTCAAGGAACTATTG+TGG | + | 8272:40119-40138 | MS.gene90986:CDS | 35.0% | |
| TAAAATGGAAGGACCAAAAC+TGG | + | 8272:45635-45654 | MS.gene90986:CDS | 35.0% | |
| TAATAGGGAGACATTGAGTT+AGG | + | 8272:44850-44869 | MS.gene90986:intron | 35.0% | |
| TATGATTCTTGACAGATCAG+TGG | + | 8272:40898-40917 | MS.gene90986:intron | 35.0% | |
| TATGCTGTAAGTGCTTACTT+AGG | - | 8272:42934-42953 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | 8272:43116-43135 | MS.gene90986:intron | 35.0% | |
| TCAGCTGCAACATATCATTA+TGG | + | 8272:42702-42721 | MS.gene90986:CDS | 35.0% | |
| TCCCTTTAATTGCAAGAACT+AGG | - | 8272:40705-40724 | None:intergenic | 35.0% | |
| TCTATTGTGTGCCTATTTCA+CGG | - | 8272:43944-43963 | None:intergenic | 35.0% | |
| TGAAAAATAGACGTGCATCA+TGG | + | 8272:43578-43597 | MS.gene90986:intron | 35.0% | |
| TGCATCATGGTAGTCTAAAT+CGG | + | 8272:43591-43610 | MS.gene90986:intron | 35.0% | |
| TGTAAGATGCATTAGACTTG+TGG | + | 8272:41856-41875 | MS.gene90986:CDS | 35.0% | |
| TGTTGTATAACATTGAACCG+AGG | + | 8272:43868-43887 | MS.gene90986:intron | 35.0% | |
| TTAGAAGCTGCAAAATGAAG+AGG | - | 8272:39934-39953 | None:intergenic | 35.0% | |
| TTATATTGTGGCATAAGTCG+TGG | + | 8272:40588-40607 | MS.gene90986:intron | 35.0% | |
| TTATCTTCTCCTGATGCAAA+TGG | + | 8272:44199-44218 | MS.gene90986:intron | 35.0% | |
| TTGATATTGAGGAGAGTTGT+AGG | + | 8272:40285-40304 | MS.gene90986:intron | 35.0% | |
| ! | ACAACATCTAAAGGCTAGTT+TGG | - | 8272:43854-43873 | None:intergenic | 35.0% |
| ! | ATAGCACATCGGTAATTTTC+TGG | - | 8272:42805-42824 | None:intergenic | 35.0% |
| ! | ATGTCAGCATGATAATGTGA+AGG | + | 8272:40941-40960 | MS.gene90986:intron | 35.0% |
| ! | ATTGTTAAAGTGTCCCACAT+TGG | + | 8272:44542-44561 | MS.gene90986:intron | 35.0% |
| ! | CACTAGAAATTCGTATCGAT+TGG | + | 8272:41697-41716 | MS.gene90986:intron | 35.0% |
| ! | CCCTAGTTCTTGCAATTAAA+GGG | + | 8272:40701-40720 | MS.gene90986:intron | 35.0% |
| ! | CGGAAATTTAAAATGCTGTC+AGG | + | 8272:42874-42893 | MS.gene90986:CDS | 35.0% |
| ! | CTTCATTTTGCAGCTTCTAA+GGG | + | 8272:39934-39953 | MS.gene90986:CDS | 35.0% |
| ! | GAGCATCGTTAAAAGATTTG+GGG | - | 8272:43142-43161 | None:intergenic | 35.0% |
| ! | GCAAAATACTCAACTTTTGG+TGG | + | 8272:39898-39917 | MS.gene90986:CDS | 35.0% |
| ! | GTACAATTTTCTGATCTTGG+TGG | + | 8272:43632-43651 | MS.gene90986:intron | 35.0% |
| ! | GTTGAGTATTTTGCAAGACA+AGG | - | 8272:39892-39911 | None:intergenic | 35.0% |
| ! | TCCCTAGTTCTTGCAATTAA+AGG | + | 8272:40700-40719 | MS.gene90986:intron | 35.0% |
| ! | TCTTCATTTTGCAGCTTCTA+AGG | + | 8272:39933-39952 | MS.gene90986:CDS | 35.0% |
| ! | TTGGTGTGTTTGTTAGATTG+TGG | + | 8272:40070-40089 | MS.gene90986:intron | 35.0% |
| !! | AACGTTTCTTCTGAAATGCA+TGG | + | 8272:45249-45268 | MS.gene90986:CDS | 35.0% |
| !! | AGATTGATTTGGATTACTGC+AGG | + | 8272:44227-44246 | MS.gene90986:intron | 35.0% |
| !! | ATGATACTCTAAGACAAGGT+AGG | - | 8272:40864-40883 | None:intergenic | 35.0% |
| !! | ATTTAATTTTTCCCCTCAGG+TGG | + | 8272:43288-43307 | MS.gene90986:intron | 35.0% |
| !! | GATTGATTTGGATTACTGCA+GGG | + | 8272:44228-44247 | MS.gene90986:intron | 35.0% |
| !! | GTTACTCCATTTTTCAACAC+TGG | - | 8272:40664-40683 | None:intergenic | 35.0% |
| !! | TGCTGTCTTGTTTACAAACT+TGG | - | 8272:42595-42614 | None:intergenic | 35.0% |
| !! | TGTTTGGATTGGCTTATTTG+AGG | - | 8272:43117-43136 | None:intergenic | 35.0% |
| !! | TTACAAGCCGGTTTGTAATA+GGG | + | 8272:44835-44854 | MS.gene90986:intron | 35.0% |
| !!! | AGGGTAAATCTGGTTTTGTA+AGG | + | 8272:44628-44647 | MS.gene90986:intron | 35.0% |
| !!! | CAATTTTAGGACCAAGACAA+TGG | - | 8272:40813-40832 | None:intergenic | 35.0% |
| !!! | CATGTTGTTTTCACCAGTTT+TGG | - | 8272:45651-45670 | None:intergenic | 35.0% |
| !!! | GTTTCTGAAACCCACTTTTT+GGG | + | 8272:43789-43808 | MS.gene90986:intron | 35.0% |
| !!! | TGTGGGATTTGTTTTTGGTT+AGG | + | 8272:43969-43988 | MS.gene90986:intron | 35.0% |
| !!! | TGTTTCTGAAACCCACTTTT+TGG | + | 8272:43788-43807 | MS.gene90986:intron | 35.0% |
| AAGATGAGAACCCGTGAAAT+AGG | + | 8272:43930-43949 | MS.gene90986:intron | 40.0% | |
| AAGATGCATTAGACTTGTGG+TGG | + | 8272:41859-41878 | MS.gene90986:CDS | 40.0% | |
| AAGCAGATTATCTAAGTGGG+AGG | + | 8272:41801-41820 | MS.gene90986:CDS | 40.0% | |
| AAGCTATCCTAAAGAGCTTG+TGG | + | 8272:43035-43054 | MS.gene90986:intron | 40.0% | |
| AAGCTTGTAGACATGGTCAT+TGG | + | 8272:41095-41114 | MS.gene90986:CDS | 40.0% | |
| AAGGAGCTGATGTGAATTCA+AGG | + | 8272:40108-40127 | MS.gene90986:CDS | 40.0% | |
| AATTGTACGATCCTACATCC+TGG | - | 8272:43620-43639 | None:intergenic | 40.0% | |
| ACATCCTAGCAACATCAAGT+GGG | - | 8272:43316-43335 | None:intergenic | 40.0% | |
| ACTTGATGTTGCTAGGATGT+GGG | + | 8272:43316-43335 | MS.gene90986:CDS | 40.0% | |
| AGCTTGTAGACATGGTCATT+GGG | + | 8272:41096-41115 | MS.gene90986:CDS | 40.0% | |
| AGTAGGGAATGATGATACGA+TGG | - | 8272:43384-43403 | None:intergenic | 40.0% | |
| ATCTCATTAGATGAGGTCGT+AGG | - | 8272:44271-44290 | None:intergenic | 40.0% | |
| ATGTCTAGTCATCCACTATC+AGG | + | 8272:44705-44724 | MS.gene90986:intron | 40.0% | |
| CAGTTGCTATGTACACAAAG+TGG | - | 8272:43739-43758 | None:intergenic | 40.0% | |
| CATAGAGGAATTGCTACAGA+TGG | - | 8272:45516-45535 | None:intergenic | 40.0% | |
| CCATCATTGCAAGTACATAG+AGG | - | 8272:45531-45550 | None:intergenic | 40.0% | |
| CCTCTATGTACTTGCAATGA+TGG | + | 8272:45528-45547 | MS.gene90986:CDS | 40.0% | |
| CGAGCATGTAGAGTTTCATA+AGG | - | 8272:41905-41924 | None:intergenic | 40.0% | |
| CGGAGAATTGTAGTTTGATG+TGG | + | 8272:40520-40539 | MS.gene90986:intron | 40.0% | |
| CGTCACGATCTTTGATATTG+AGG | + | 8272:40274-40293 | MS.gene90986:intron | 40.0% | |
| CGTCACGATCTTTGATATTG+CGG | + | 8272:40274-40293 | MS.gene90986:intron | 40.0% | |
| CTATCGCTCTCTCAAAACAT+GGG | - | 8272:44475-44494 | None:intergenic | 40.0% | |
| CTATGCATTAATATAGGGGC+TGG | + | 8272:42821-42840 | MS.gene90986:intron | 40.0% | |
| CTATTGTGTGCCTATTTCAC+GGG | - | 8272:43943-43962 | None:intergenic | 40.0% | |
| CTTACTTAGGCTAATATCCG+AGG | - | 8272:42921-42940 | None:intergenic | 40.0% | |
| CTTCATATGGCTGCATTGAA+CGG | + | 8272:42633-42652 | MS.gene90986:CDS | 40.0% | |
| GAAGTCGATCTCATTAGATG+AGG | - | 8272:44278-44297 | None:intergenic | 40.0% | |
| GAGGATTGATCTATTTCACG+TGG | - | 8272:45405-45424 | None:intergenic | 40.0% | |
| GATACGATGGTATCAGAACT+CGG | - | 8272:43371-43390 | None:intergenic | 40.0% | |
| GGAATTGCTACAGATGGAAA+TGG | - | 8272:45510-45529 | None:intergenic | 40.0% | |
| GGCACACAATAGAAATGATG+TGG | + | 8272:43951-43970 | MS.gene90986:intron | 40.0% | |
| TAAATCGGAATCCAGGATGT+AGG | + | 8272:43606-43625 | MS.gene90986:intron | 40.0% | |
| TACAGACACTATTGCGGTTA+CGG | + | 8272:42428-42447 | MS.gene90986:intron | 40.0% | |
| TACAGATGGAAATGGTGTAC+AGG | - | 8272:45502-45521 | None:intergenic | 40.0% | |
| TCTCAGATCCTGCTTTCAAA+AGG | + | 8272:43168-43187 | MS.gene90986:intron | 40.0% | |
| TCTTGTGTTTCATCTTCACC+GGG | - | 8272:45573-45592 | None:intergenic | 40.0% | |
| TGAAAGACTGAGAAAAGGGA+CGG | - | 8272:41167-41186 | None:intergenic | 40.0% | |
| TTCACTTTGCAGCTGTTAGT+GGG | + | 8272:41831-41850 | MS.gene90986:CDS | 40.0% | |
| TTCATATGGCTGCATTGAAC+GGG | + | 8272:42634-42653 | MS.gene90986:CDS | 40.0% | |
| TTGATGCAAGCTTGTAGACA+TGG | + | 8272:41088-41107 | MS.gene90986:CDS | 40.0% | |
| ! | AGCTTCTAAGGGTCATAATG+AGG | + | 8272:39945-39964 | MS.gene90986:CDS | 40.0% |
| ! | GAAGGTTGAAAGCATGTGTT+GGG | + | 8272:41216-41235 | MS.gene90986:intron | 40.0% |
| ! | GATTTAAAGCCCGACTATCA+TGG | + | 8272:42294-42313 | MS.gene90986:intron | 40.0% |
| ! | GGTTGAAGCAAAGATGCTTT+TGG | + | 8272:39858-39877 | MS.gene90986:CDS | 40.0% |
| ! | GTGGCATTGTTGCTTGAAAA+AGG | + | 8272:40089-40108 | MS.gene90986:CDS | 40.0% |
| ! | GTGTGTGTGTGTGTCTATTT+TGG | - | 8272:41664-41683 | None:intergenic | 40.0% |
| ! | TAAAAGATTTGGGGCCTGTT+TGG | - | 8272:43133-43152 | None:intergenic | 40.0% |
| ! | TCTAGAGTGTAACCTGATAG+TGG | - | 8272:44720-44739 | None:intergenic | 40.0% |
| ! | TGAAGGTTGAAAGCATGTGT+TGG | + | 8272:41215-41234 | MS.gene90986:intron | 40.0% |
| ! | TGCTTTCAAAAGGTGCAACT+CGG | + | 8272:43178-43197 | MS.gene90986:CDS | 40.0% |
| ! | TTCACTACCAAAACTTGGTG+TGG | - | 8272:41556-41575 | None:intergenic | 40.0% |
| !! | AGAGTTTCATAAGGAGCACT+CGG | - | 8272:41896-41915 | None:intergenic | 40.0% |
| !! | ATCGGTAATTTTCTGGTAGG+AGG | - | 8272:42798-42817 | None:intergenic | 40.0% |
| !! | CACATCGGTAATTTTCTGGT+AGG | - | 8272:42801-42820 | None:intergenic | 40.0% |
| !! | CTATTACAAACCGGCTTGTA+AGG | - | 8272:44836-44855 | None:intergenic | 40.0% |
| !! | CTTACAAGCCGGTTTGTAAT+AGG | + | 8272:44834-44853 | MS.gene90986:intron | 40.0% |
| !! | GGGGTTTTAACCCAAAAAGT+GGG | - | 8272:43802-43821 | None:intergenic | 40.0% |
| !! | TCGGTAATTTTCTGGTAGGA+GGG | - | 8272:42797-42816 | None:intergenic | 40.0% |
| !! | TCTCAAGACTTTTTCCATGC+AGG | + | 8272:45174-45193 | MS.gene90986:intron | 40.0% |
| !! | TCTTTTGGTTGTTCAGCTTC+TGG | + | 8272:39799-39818 | MS.gene90986:CDS | 40.0% |
| !!! | CGGAGACCTTTATTTTAACC+TGG | + | 8272:40612-40631 | MS.gene90986:intron | 40.0% |
| !!! | TGGTTTTGTAAGGACGAGTT+AGG | + | 8272:44638-44657 | MS.gene90986:intron | 40.0% |
| AAACAAGACGACGTGAAACC+TGG | - | 8272:43773-43792 | None:intergenic | 45.0% | |
| ACAAGCTTCGACTACAGATC+AGG | + | 8272:45611-45630 | MS.gene90986:CDS | 45.0% | |
| ACTGCAATGCAATCGGGATT+AGG | - | 8272:40547-40566 | None:intergenic | 45.0% | |
| ACTTGGACAATTCACTGCAC+CGG | - | 8272:42578-42597 | None:intergenic | 45.0% | |
| ATTCTGCACAGGTACAGACA+CGG | - | 8272:43664-43683 | None:intergenic | 45.0% | |
| ATTGTGGCATAAGTCGTGGT+CGG | + | 8272:40592-40611 | MS.gene90986:intron | 45.0% | |
| CACATCCTAGCAACATCAAG+TGG | - | 8272:43317-43336 | None:intergenic | 45.0% | |
| CACTTGATGTTGCTAGGATG+TGG | + | 8272:43315-43334 | MS.gene90986:CDS | 45.0% | |
| CCACAAGCAGCATAATGCAA+TGG | - | 8272:42854-42873 | None:intergenic | 45.0% | |
| CCTATCGCTCTCTCAAAACA+TGG | - | 8272:44476-44495 | None:intergenic | 45.0% | |
| CTGCAATGCAATCGGGATTA+GGG | - | 8272:40546-40565 | None:intergenic | 45.0% | |
| CTTCACTTTGCAGCTGTTAG+TGG | + | 8272:41830-41849 | MS.gene90986:CDS | 45.0% | |
| CTTGATGTTGCTAGGATGTG+GGG | + | 8272:43317-43336 | MS.gene90986:CDS | 45.0% | |
| GAAATGGTGTACAGGTGACA+GGG | - | 8272:45494-45513 | None:intergenic | 45.0% | |
| GCAACTGTAGTTCATAGTCC+AGG | + | 8272:43752-43771 | MS.gene90986:intron | 45.0% | |
| GGATGACTAGACATCTAGAG+TGG | - | 8272:44699-44718 | None:intergenic | 45.0% | |
| GGTAGTCTAAATCGGAATCC+AGG | + | 8272:43599-43618 | MS.gene90986:intron | 45.0% | |
| GTAAACAAGACAGCAGATGC+AGG | + | 8272:42600-42619 | MS.gene90986:CDS | 45.0% | |
| TATGTTGAGCACGCTCATGA+GGG | - | 8272:43426-43445 | None:intergenic | 45.0% | |
| TCATCTTCACCGGGTTCAAA+TGG | - | 8272:45564-45583 | None:intergenic | 45.0% | |
| TCATCTTCGACATTGTTCCC+TGG | - | 8272:43917-43936 | None:intergenic | 45.0% | |
| TCTTGACAGATCAGTGGATC+TGG | + | 8272:40904-40923 | MS.gene90986:intron | 45.0% | |
| TGAAACTCTACATGCTCGTC+TGG | + | 8272:41907-41926 | MS.gene90986:CDS | 45.0% | |
| TGCAGCAAGAGATGGTGATT+TGG | + | 8272:39837-39856 | MS.gene90986:CDS | 45.0% | |
| TGCCAAGACTGCAATGCAAT+CGG | - | 8272:40554-40573 | None:intergenic | 45.0% | |
| TTCAAGGAACTATTGTGGGC+AGG | + | 8272:40124-40143 | MS.gene90986:CDS | 45.0% | |
| TTGATGTTGCTAGGATGTGG+GGG | + | 8272:43318-43337 | MS.gene90986:CDS | 45.0% | |
| TTGGATTACTGCAGGGAATG+TGG | + | 8272:44235-44254 | MS.gene90986:intron | 45.0% | |
| TTGGTATCTGCAGCAAGAGA+TGG | + | 8272:39829-39848 | MS.gene90986:CDS | 45.0% | |
| ! | ACACATGGACGTAACGGAAT+GGG | + | 8272:44944-44963 | MS.gene90986:intron | 45.0% |
| ! | CCATTGCATTATGCTGCTTG+TGG | + | 8272:42851-42870 | MS.gene90986:CDS | 45.0% |
| ! | GTTGAAAGCATGTGTTGGGT+GGG | + | 8272:41220-41239 | MS.gene90986:intron | 45.0% |
| ! | TACACATGGACGTAACGGAA+TGG | + | 8272:44943-44962 | MS.gene90986:intron | 45.0% |
| ! | TTCAAAAGGTGCAACTCGGA+TGG | + | 8272:43182-43201 | MS.gene90986:CDS | 45.0% |
| ! | TTGCATTATGCTGCTTGTGG+CGG | + | 8272:42854-42873 | MS.gene90986:CDS | 45.0% |
| !! | ACCGAGGAAGAAAAAGCACT+AGG | + | 8272:43884-43903 | MS.gene90986:intron | 45.0% |
| !! | GAGTTGCACCTTTTGAAAGC+AGG | - | 8272:43179-43198 | None:intergenic | 45.0% |
| !! | GAGTTTCATAAGGAGCACTC+GGG | - | 8272:41895-41914 | None:intergenic | 45.0% |
| !! | GGATGGCTTTGAACTGCAAT+GGG | + | 8272:43199-43218 | MS.gene90986:CDS | 45.0% |
| !! | GGGGGTTTTAACCCAAAAAG+TGG | - | 8272:43803-43822 | None:intergenic | 45.0% |
| !!! | CCATGTTTTGAGAGAGCGAT+AGG | + | 8272:44473-44492 | MS.gene90986:intron | 45.0% |
| !!! | GCCTAGTGCTTTTTCTTCCT+CGG | - | 8272:43888-43907 | None:intergenic | 45.0% |
| !!! | GTTTTGAGAGAGCGATAGGA+GGG | + | 8272:44477-44496 | MS.gene90986:intron | 45.0% |
| !!! | TGTTTTGAGAGAGCGATAGG+AGG | + | 8272:44476-44495 | MS.gene90986:intron | 45.0% |
| !! | AAAAATAAAAAATAAAACTA+AGG | - | 8272:45004-45023 | None:intergenic | 5.0% |
| ACGTTCCTCACCTTACAAGC+CGG | + | 8272:44823-44842 | MS.gene90986:intron | 50.0% | |
| AGCATGTGTTGGGTGGGATT+TGG | + | 8272:41226-41245 | MS.gene90986:intron | 50.0% | |
| ATGGCAAAGCGATTCTGCAC+AGG | - | 8272:43675-43694 | None:intergenic | 50.0% | |
| ATGTTGAGCACGCTCATGAG+GGG | - | 8272:43425-43444 | None:intergenic | 50.0% | |
| CATGTCGACAAAGGGGACAA+GGG | - | 8272:45290-45309 | None:intergenic | 50.0% | |
| CGGAAGAAACAGAAGCAACC+CGG | - | 8272:45461-45480 | None:intergenic | 50.0% | |
| CTATGTTGAGCACGCTCATG+AGG | - | 8272:43427-43446 | None:intergenic | 50.0% | |
| GCCAAGACTGCAATGCAATC+GGG | - | 8272:40553-40572 | None:intergenic | 50.0% | |
| GGAAATGGTGTACAGGTGAC+AGG | - | 8272:45495-45514 | None:intergenic | 50.0% | |
| GGGTAGAAGAAGTTGCAGCA+GGG | + | 8272:45686-45705 | MS.gene90986:CDS | 50.0% | |
| GTTGTTCAGCTTCTGGTGAG+AGG | + | 8272:39806-39825 | MS.gene90986:CDS | 50.0% | |
| TAGACTTGTGGTGGCTGACT+TGG | + | 8272:41868-41887 | MS.gene90986:CDS | 50.0% | |
| TCACGTGGATGCTGTATGCA+TGG | - | 8272:45390-45409 | None:intergenic | 50.0% | |
| TCCCGATTGCATTGCAGTCT+TGG | + | 8272:40549-40568 | MS.gene90986:intron | 50.0% | |
| TCTTCACCGGGTTCAAATGG+CGG | - | 8272:45561-45580 | None:intergenic | 50.0% | |
| TTCAGCTTCTGGTGAGAGGT+TGG | + | 8272:39810-39829 | MS.gene90986:CDS | 50.0% | |
| TTCTGCACAGGTACAGACAC+GGG | - | 8272:43663-43682 | None:intergenic | 50.0% | |
| ! | CTGGATGCTGATGTTGGTGA+TGG | + | 8272:41926-41945 | MS.gene90986:CDS | 50.0% |
| ! | GATTTGGGGCCTGTTTGGAT+TGG | - | 8272:43128-43147 | None:intergenic | 50.0% |
| ! | GGTTGAAAGCATGTGTTGGG+TGG | + | 8272:41219-41238 | MS.gene90986:intron | 50.0% |
| !! | ACAAACCGGCTTGTAAGGTG+AGG | - | 8272:44831-44850 | None:intergenic | 50.0% |
| !! | CGGATGGCTTTGAACTGCAA+TGG | + | 8272:43198-43217 | MS.gene90986:CDS | 50.0% |
| !! | TCACTGGCTTGAACCATTGC+TGG | + | 8272:43343-43362 | MS.gene90986:CDS | 50.0% |
| AACCGCAATGCGACCTGGAT+TGG | - | 8272:40331-40350 | None:intergenic | 55.0% | |
| ATCAAGTGGGAGCCACCTGA+GGG | - | 8272:43303-43322 | None:intergenic | 55.0% | |
| CCATGTACAGTGGCAGCAGA+AGG | + | 8272:44319-44338 | MS.gene90986:CDS | 55.0% | |
| CCATGTCGACAAAGGGGACA+AGG | - | 8272:45291-45310 | None:intergenic | 55.0% | |
| CCTTCTGCTGCCACTGTACA+TGG | - | 8272:44322-44341 | None:intergenic | 55.0% | |
| CCTTGTCCCCTTTGTCGACA+TGG | + | 8272:45288-45307 | MS.gene90986:CDS | 55.0% | |
| CCTTGTCCGCCATTTGAACC+CGG | + | 8272:45552-45571 | MS.gene90986:CDS | 55.0% | |
| CTCCAATCCAGGTCGCATTG+CGG | + | 8272:40326-40345 | MS.gene90986:intron | 55.0% | |
| GACAAGGGACAGAACCAGGA+GGG | - | 8272:45275-45294 | None:intergenic | 55.0% | |
| GCTCATGCATGCATCCTGCA+TGG | - | 8272:45191-45210 | None:intergenic | 55.0% | |
| GCTCGTCTGGATGCTGATGT+TGG | + | 8272:41920-41939 | MS.gene90986:CDS | 55.0% | |
| GGCTCCCACTTGATGTTGCT+AGG | + | 8272:43309-43328 | MS.gene90986:CDS | 55.0% | |
| GGGGTAGAAGAAGTTGCAGC+AGG | + | 8272:45685-45704 | MS.gene90986:CDS | 55.0% | |
| GTAGGCAAATGCAGCCGATG+CGG | + | 8272:40303-40322 | MS.gene90986:intron | 55.0% | |
| GTCGAAGCTTGTGAGTCACG+AGG | - | 8272:45603-45622 | None:intergenic | 55.0% | |
| TGAGCGTGCTCAACATAGCC+AGG | + | 8272:43429-43448 | MS.gene90986:CDS | 55.0% | |
| ! | AAAGCACTAGGCACTGCACC+AGG | + | 8272:43896-43915 | MS.gene90986:intron | 55.0% |
| ! | AAGCACTAGGCACTGCACCA+GGG | + | 8272:43897-43916 | MS.gene90986:intron | 55.0% |
| ! | GGTGACAGGGCAAAGCATCT+CGG | - | 8272:45481-45500 | None:intergenic | 55.0% |
| ! | TCCAGGTCGCATTGCGGTTT+TGG | + | 8272:40332-40351 | MS.gene90986:intron | 55.0% |
| ! | TCTGAAATGCATGGCCCTCC+TGG | + | 8272:45258-45277 | MS.gene90986:CDS | 55.0% |
| !! | AGGCTGGCCACACCAAGTTT+TGG | + | 8272:41546-41565 | MS.gene90986:intron | 55.0% |
| !! | TCAGAACTCGGTGCCAGCAA+TGG | - | 8272:43359-43378 | None:intergenic | 55.0% |
| AGGGGACAAGGGACAGAACC+AGG | - | 8272:45279-45298 | None:intergenic | 60.0% | |
| CATCAAGTGGGAGCCACCTG+AGG | - | 8272:43304-43323 | None:intergenic | 60.0% | |
| CCACTGTACATGGCCTCTCC+AGG | - | 8272:44312-44331 | None:intergenic | 60.0% | |
| CCTGGAGAGGCCATGTACAG+TGG | + | 8272:44309-44328 | MS.gene90986:CDS | 60.0% | |
| CGACTTCTGTGCTGTCTGCC+TGG | + | 8272:44291-44310 | MS.gene90986:CDS | 60.0% | |
| GCCAAAACCGCAATGCGACC+TGG | - | 8272:40336-40355 | None:intergenic | 60.0% | |
| GGACAAGGGACAGAACCAGG+AGG | - | 8272:45276-45295 | None:intergenic | 60.0% | |
| TCAAGTGGGAGCCACCTGAG+GGG | - | 8272:43302-43321 | None:intergenic | 60.0% | |
| TCTGTGCTGTCTGCCTGGAG+AGG | + | 8272:44296-44315 | MS.gene90986:CDS | 60.0% | |
| ! | GACCTGGATTGGAGCCGCAT+CGG | - | 8272:40320-40339 | None:intergenic | 60.0% |
| !! | CCGGGTTCAAATGGCGGACA+AGG | - | 8272:45555-45574 | None:intergenic | 60.0% |
| AGCCGATGCGGCTCCAATCC+AGG | + | 8272:40315-40334 | MS.gene90986:intron | 65.0% | |
| !! | CTAGGATGTGGGGGCGTCAC+TGG | + | 8272:43327-43346 | MS.gene90986:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8272 | gene | 39790 | 45740 | 39790 | ID=MS.gene90986 |
| 8272 | mRNA | 39790 | 45740 | 39790 | ID=MS.gene90986.t1;Parent=MS.gene90986 |
| 8272 | exon | 39790 | 39966 | 39790 | ID=MS.gene90986.t1.exon1;Parent=MS.gene90986.t1 |
| 8272 | CDS | 39790 | 39966 | 39790 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 40086 | 40145 | 40086 | ID=MS.gene90986.t1.exon2;Parent=MS.gene90986.t1 |
| 8272 | CDS | 40086 | 40145 | 40086 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 41082 | 41153 | 41082 | ID=MS.gene90986.t1.exon3;Parent=MS.gene90986.t1 |
| 8272 | CDS | 41082 | 41153 | 41082 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 41794 | 41978 | 41794 | ID=MS.gene90986.t1.exon4;Parent=MS.gene90986.t1 |
| 8272 | CDS | 41794 | 41978 | 41794 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 42584 | 42744 | 42584 | ID=MS.gene90986.t1.exon5;Parent=MS.gene90986.t1 |
| 8272 | CDS | 42584 | 42744 | 42584 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 42837 | 42895 | 42837 | ID=MS.gene90986.t1.exon6;Parent=MS.gene90986.t1 |
| 8272 | CDS | 42837 | 42895 | 42837 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 43174 | 43220 | 43174 | ID=MS.gene90986.t1.exon7;Parent=MS.gene90986.t1 |
| 8272 | CDS | 43174 | 43220 | 43174 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 43307 | 43450 | 43307 | ID=MS.gene90986.t1.exon8;Parent=MS.gene90986.t1 |
| 8272 | CDS | 43307 | 43450 | 43307 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 44249 | 44340 | 44249 | ID=MS.gene90986.t1.exon9;Parent=MS.gene90986.t1 |
| 8272 | CDS | 44249 | 44340 | 44249 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| 8272 | exon | 45196 | 45740 | 45196 | ID=MS.gene90986.t1.exon10;Parent=MS.gene90986.t1 |
| 8272 | CDS | 45196 | 45740 | 45196 | ID=cds.MS.gene90986.t1;Parent=MS.gene90986.t1 |
| Gene Sequence |
| Protein sequence |
