Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91148.t1 | RHN78432.1 | 90.4 | 281 | 17 | 1 | 1 | 281 | 1 | 271 | 4.50E-106 | 394.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91148.t1 | A0A072VGP8 | 90.4 | 281 | 17 | 1 | 1 | 281 | 1 | 271 | 3.2e-106 | 394.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050099 | MS.gene91148 | 0.815717 | 8.01E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene91148 | 0.807315 | 5.37E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene91148 | 0.800906 | 1.16E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91148.t1 | MTR_1g039490 | 85.461 | 282 | 29 | 3 | 1 | 281 | 1 | 271 | 9.00e-151 | 428 |
| MS.gene91148.t1 | MTR_1g039490 | 85.409 | 281 | 29 | 3 | 1 | 280 | 1 | 270 | 2.95e-149 | 425 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91148.t1 | AT5G08540 | 62.590 | 278 | 99 | 3 | 8 | 281 | 1 | 277 | 2.28e-107 | 319 |
Find 76 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCATATCCAGACAGGTTT+TGG | 0.271336 | 1.3:+22707932 | MS.gene91148:intron |
| CAAAGCGCAGCGCCGAAAAT+TGG | 0.295812 | 1.3:+22706580 | MS.gene91148:CDS |
| CTAGCCGTTCAGGCCCTCTT+TGG | 0.305163 | 1.3:+22710106 | MS.gene91148:CDS |
| AAGAGGAAGAGATGAAATTA+AGG | 0.321398 | 1.3:+22706897 | MS.gene91148:CDS |
| GCTGTTCCGCTTGGTTATTT+AGG | 0.322575 | 1.3:+22706506 | MS.gene91148:CDS |
| TCTCAAGGCTATTGAGAATA+AGG | 0.332468 | 1.3:+22706927 | MS.gene91148:CDS |
| CCTCTCTTCATATCGGAAAC+AGG | 0.359985 | 1.3:+22710999 | MS.gene91148:CDS |
| ATTATTAGGGTTAGTGTTGT+TGG | 0.364668 | 1.3:-22706327 | None:intergenic |
| ATTAAATCAGCTACAACATC+AGG | 0.370866 | 1.3:-22708013 | None:intergenic |
| GCGCTACAAAGCGGAGCGTT+TGG | 0.384066 | 1.3:+22710723 | MS.gene91148:CDS |
| CCTGATTTATTCATTACAAT+AGG | 0.384185 | 1.3:-22710055 | None:intergenic |
| TTGTTCTCCTCTCTTCATAT+CGG | 0.384785 | 1.3:+22710992 | MS.gene91148:CDS |
| TAAATCAGGTTATACTGAAA+AGG | 0.391414 | 1.3:+22710069 | MS.gene91148:CDS |
| CAAGAGAAAACTAGCCGTTC+AGG | 0.407288 | 1.3:+22710096 | MS.gene91148:CDS |
| TTTGTTTGGATTGATTATTA+GGG | 0.418887 | 1.3:-22706340 | None:intergenic |
| TAGCTGATTTAATTCAACTA+AGG | 0.440271 | 1.3:+22708023 | MS.gene91148:CDS |
| TCAGTTACACAAGCAATTCC+TGG | 0.441636 | 1.3:+22706446 | MS.gene91148:CDS |
| TGGTTGGGAGAGGGAGAAAG+TGG | 0.443419 | 1.3:-22706169 | None:intergenic |
| AAATCAGGTTATACTGAAAA+GGG | 0.451512 | 1.3:+22710070 | MS.gene91148:CDS |
| CCTATTGTAATGAATAAATC+AGG | 0.452441 | 1.3:+22710055 | MS.gene91148:CDS |
| CTTGACCTTGTTGAATTCAC+CGG | 0.459910 | 1.3:+22706422 | MS.gene91148:CDS |
| AATTCAATAGGAAATAGCTT+TGG | 0.468946 | 1.3:+22711261 | MS.gene91148:intron |
| GTTTCTCATTCAGAGCATAT+CGG | 0.471136 | 1.3:-22707982 | None:intergenic |
| TTGGAGAAAGCGGGCGAAGC+GGG | 0.477134 | 1.3:+22710742 | MS.gene91148:CDS |
| GATGAGTTTCACTAAGAAAC+CGG | 0.480812 | 1.3:-22710616 | None:intergenic |
| GCTACAACATCAGGGTTGAA+TGG | 0.484197 | 1.3:-22708004 | None:intergenic |
| TGGATTCTCGCTGTTCCGCT+TGG | 0.485199 | 1.3:+22706497 | MS.gene91148:CDS |
| GAAGAAGAAGTGAAAGCCAT+TGG | 0.496385 | 1.3:-22706137 | None:intergenic |
| TGAAGCAACGGTTGAGATTG+AGG | 0.506664 | 1.3:-22706285 | None:intergenic |
| GCCGCTACTGCGGTGCGGAG+TGG | 0.507189 | 1.3:+22710676 | MS.gene91148:CDS |
| CGAAGAATTGTGCGAGACAA+AGG | 0.514186 | 1.3:+22708100 | MS.gene91148:CDS |
| GAAGAAGATAAGAATAAGAG+TGG | 0.515773 | 1.3:-22706257 | None:intergenic |
| GTCAATAGCCGCCGCTACTG+CGG | 0.518597 | 1.3:+22710666 | MS.gene91148:CDS |
| AGCAATTCCTGGTCCACGAG+TGG | 0.518626 | 1.3:+22706457 | MS.gene91148:CDS |
| GCCACTCCGCACCGCAGTAG+CGG | 0.529873 | 1.3:-22710677 | None:intergenic |
| AAGTTGAAGAAGAACTTCCA+TGG | 0.535057 | 1.3:+22706384 | MS.gene91148:CDS |
| AAACAACGGTTGAGATTGAA+AGG | 0.537763 | 1.3:-22706210 | None:intergenic |
| GGTTGGGAGAGGGAGAAAGT+GGG | 0.538087 | 1.3:-22706168 | None:intergenic |
| GAGAATCCACGGCAACGAAG+TGG | 0.540493 | 1.3:-22706483 | None:intergenic |
| AGCGGAACAGCGAGAATCCA+CGG | 0.540855 | 1.3:-22706494 | None:intergenic |
| TGGGTCCCACTTCGTTGCCG+TGG | 0.540976 | 1.3:+22706477 | MS.gene91148:CDS |
| GTGGGACCCACTCGTGGACC+AGG | 0.544234 | 1.3:-22706464 | None:intergenic |
| AGCGGAGCGTTTGGAGAAAG+CGG | 0.549766 | 1.3:+22710732 | MS.gene91148:CDS |
| AATTGCTTGTGTAACTGAAC+CGG | 0.552177 | 1.3:-22706441 | None:intergenic |
| ATAGAAGACCTTTCCAAAGA+GGG | 0.564726 | 1.3:-22710119 | None:intergenic |
| CTTTCCAAAGAGGGCCTGAA+CGG | 0.565438 | 1.3:-22710110 | None:intergenic |
| CGTTCAGGCCCTCTTTGGAA+AGG | 0.566083 | 1.3:+22710111 | MS.gene91148:CDS |
| TTTCTTAGTGAAACTCATCA+AGG | 0.566094 | 1.3:+22710620 | MS.gene91148:CDS |
| AACAACGGTTGAGATTGAAA+GGG | 0.570439 | 1.3:-22706209 | None:intergenic |
| GCGGAGCGTTTGGAGAAAGC+GGG | 0.578200 | 1.3:+22710733 | MS.gene91148:CDS |
| TTTCGATGATGCTGAAGCAA+CGG | 0.578656 | 1.3:-22706297 | None:intergenic |
| TGAAACTCATCAAGGTGAGG+TGG | 0.578817 | 1.3:+22710628 | MS.gene91148:CDS |
| AGAATCCACGGCAACGAAGT+GGG | 0.594319 | 1.3:-22706482 | None:intergenic |
| ACAACGGTTGAGATTGAAAG+GGG | 0.595406 | 1.3:-22706208 | None:intergenic |
| GAAACTCATCAAGGTGAGGT+GGG | 0.595416 | 1.3:+22710629 | MS.gene91148:CDS |
| AATTAAGGTTGATGATCTCA+AGG | 0.595749 | 1.3:+22706912 | MS.gene91148:CDS |
| AACGAAGTGGGACCCACTCG+TGG | 0.598245 | 1.3:-22706470 | None:intergenic |
| AGCGATGCAGCGCTACAAAG+CGG | 0.619372 | 1.3:+22710714 | MS.gene91148:CDS |
| ACTCCGCACCGCAGTAGCGG+CGG | 0.619793 | 1.3:-22710674 | None:intergenic |
| TTAGTCAAATAGGCACCCAC+CGG | 0.621226 | 1.3:+22710597 | MS.gene91148:intron |
| GATAGAAGACCTTTCCAAAG+AGG | 0.622411 | 1.3:-22710120 | None:intergenic |
| GCAATTCCTGGTCCACGAGT+GGG | 0.631783 | 1.3:+22706458 | MS.gene91148:CDS |
| TTTGGAGAAAGCGGGCGAAG+CGG | 0.632975 | 1.3:+22710741 | MS.gene91148:CDS |
| CCTGTTTCCGATATGAAGAG+AGG | 0.635991 | 1.3:-22710999 | None:intergenic |
| GTGGATGAGTTGTTGCAAAG+AGG | 0.637380 | 1.3:+22706880 | MS.gene91148:CDS |
| TGCAATGCTGTGTAAGTCGG+TGG | 0.642042 | 1.3:+22706861 | MS.gene91148:CDS |
| TTGTTGTACGTACAATGAAG+AGG | 0.644442 | 1.3:-22710910 | None:intergenic |
| GAGTTTCACTAAGAAACCGG+TGG | 0.645032 | 1.3:-22710613 | None:intergenic |
| TAGCCGCCGCTACTGCGGTG+CGG | 0.645715 | 1.3:+22710671 | MS.gene91148:CDS |
| AAATGCAATGCTGTGTAAGT+CGG | 0.653400 | 1.3:+22706858 | MS.gene91148:CDS |
| AAAGGTCTTCTATCTATCTG+AGG | 0.657891 | 1.3:+22710129 | MS.gene91148:CDS |
| TTAAATCAGCTACAACATCA+GGG | 0.663431 | 1.3:-22708012 | None:intergenic |
| TAGTGAAACTCATCAAGGTG+AGG | 0.664959 | 1.3:+22710625 | MS.gene91148:CDS |
| CTGAACCGGTGAATTCAACA+AGG | 0.671168 | 1.3:-22706427 | None:intergenic |
| AGTTTCACTAAGAAACCGGT+GGG | 0.674485 | 1.3:-22710612 | None:intergenic |
| GTAAGACCTAAATAACCAAG+CGG | 0.691105 | 1.3:-22706512 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTCAATGATTTTT+AGG | + | chr1.3:22710031-22710050 | MS.gene91148:intron | 10.0% |
| !!! | TTTTATTTCAATGATTTTTA+GGG | + | chr1.3:22710032-22710051 | MS.gene91148:intron | 10.0% |
| !! | AAAAGAAATTTGGATAAAAT+AGG | + | chr1.3:22709692-22709711 | MS.gene91148:intron | 15.0% |
| !! | AAGAATTAAAAAAATCTGTT+TGG | - | chr1.3:22708903-22708922 | None:intergenic | 15.0% |
| !! | AAGTTACTTGTAAATTAAAA+TGG | + | chr1.3:22709888-22709907 | MS.gene91148:intron | 15.0% |
| !! | ACAAGATATATAAATAATGT+AGG | + | chr1.3:22709358-22709377 | MS.gene91148:intron | 15.0% |
| !! | AGAAAAAAAAAATGATTTCA+TGG | - | chr1.3:22709953-22709972 | None:intergenic | 15.0% |
| !! | TTTAAAAAACTAAATCAAAC+AGG | - | chr1.3:22708572-22708591 | None:intergenic | 15.0% |
| !!! | AAAATAAAACAGAATTTGTT+CGG | + | chr1.3:22709194-22709213 | MS.gene91148:intron | 15.0% |
| !!! | AAGATTTTTCACAAATATTA+AGG | - | chr1.3:22707286-22707305 | None:intergenic | 15.0% |
| !!! | CAAATTCTGTTTTATTTTAA+TGG | - | chr1.3:22709192-22709211 | None:intergenic | 15.0% |
| !!! | TAAAAACTTTAAAACTTGTT+TGG | + | chr1.3:22708616-22708635 | MS.gene91148:intron | 15.0% |
| !! | AATATAAACCTGCAAAATTA+AGG | - | chr1.3:22707362-22707381 | None:intergenic | 20.0% |
| !! | AGTATAGTTAGTATTACAAT+GGG | - | chr1.3:22709161-22709180 | None:intergenic | 20.0% |
| !! | ATACAAAATGAAGAGAAAAT+AGG | + | chr1.3:22710395-22710414 | MS.gene91148:intron | 20.0% |
| !! | ATATAAACCTGCAAAATTAA+GGG | - | chr1.3:22707361-22707380 | None:intergenic | 20.0% |
| !! | ATTTGCTCAACAATTATTAT+GGG | + | chr1.3:22710281-22710300 | MS.gene91148:intron | 20.0% |
| !! | GGTATATTCAAAGTTTAAAA+AGG | - | chr1.3:22707396-22707415 | None:intergenic | 20.0% |
| !! | GTTCTTATTGTATTTATTGA+TGG | + | chr1.3:22706613-22706632 | MS.gene91148:intron | 20.0% |
| !! | TAAAACAATTTCAGTATTAC+TGG | - | chr1.3:22710307-22710326 | None:intergenic | 20.0% |
| !! | TAAACAACAATATGTTATGA+GGG | + | chr1.3:22706980-22706999 | MS.gene91148:intron | 20.0% |
| !! | TACAAAATGAAGAGAAAATA+GGG | + | chr1.3:22710396-22710415 | MS.gene91148:intron | 20.0% |
| !! | TAGTATAGTTAGTATTACAA+TGG | - | chr1.3:22709162-22709181 | None:intergenic | 20.0% |
| !! | TGAAAAATCTTAGTTAAATG+TGG | + | chr1.3:22707295-22707314 | MS.gene91148:intron | 20.0% |
| !! | TTAAACAACAATATGTTATG+AGG | + | chr1.3:22706979-22706998 | MS.gene91148:intron | 20.0% |
| !! | TTTGTTTGGATTGATTATTA+GGG | - | chr1.3:22706343-22706362 | None:intergenic | 20.0% |
| !!! | AGTAATACTGAAATTGTTTT+AGG | + | chr1.3:22710306-22710325 | MS.gene91148:intron | 20.0% |
| !!! | ATCAAATGGTTTTAAAATAC+AGG | + | chr1.3:22708402-22708421 | MS.gene91148:intron | 20.0% |
| !!! | ATTTATCATCTAAAATCCAA+TGG | - | chr1.3:22709029-22709048 | None:intergenic | 20.0% |
| !!! | GACTTTTCTAAAAAATACAA+AGG | + | chr1.3:22708819-22708838 | MS.gene91148:intron | 20.0% |
| !!! | GTAATACTGAAATTGTTTTA+GGG | + | chr1.3:22710307-22710326 | MS.gene91148:intron | 20.0% |
| !!! | TACTTTTAAAAACAGCAAAA+TGG | - | chr1.3:22708680-22708699 | None:intergenic | 20.0% |
| !!! | TCTGTTTTGTAATTCATAAA+GGG | + | chr1.3:22711181-22711200 | MS.gene91148:intron | 20.0% |
| !!! | TGTATTTTTTAGAAAAGTCA+AGG | - | chr1.3:22708818-22708837 | None:intergenic | 20.0% |
| !!! | TTCTAAAAAATACAAAGGAT+TGG | + | chr1.3:22708824-22708843 | MS.gene91148:intron | 20.0% |
| !!! | TTCTGTTTTGTAATTCATAA+AGG | + | chr1.3:22711180-22711199 | MS.gene91148:intron | 20.0% |
| !!! | TTGTTTGTTTTTGATATACA+AGG | + | chr1.3:22709063-22709082 | MS.gene91148:intron | 20.0% |
| !!! | TTTTGTTTGGATTGATTATT+AGG | - | chr1.3:22706344-22706363 | None:intergenic | 20.0% |
| !!! | TTTTTCTAATTTTGGAGTTT+CGG | - | chr1.3:22708743-22708762 | None:intergenic | 20.0% |
| ! | AAAAAAATGATTTCATGGAC+TGG | - | chr1.3:22709948-22709967 | None:intergenic | 25.0% |
| ! | AAAAACCAAAACAGCAAATA+TGG | + | chr1.3:22708700-22708719 | MS.gene91148:intron | 25.0% |
| ! | AAAACCAAAACAGCAAATAT+GGG | + | chr1.3:22708701-22708720 | MS.gene91148:intron | 25.0% |
| ! | AAACAACAATATGTTATGAG+GGG | + | chr1.3:22706981-22707000 | MS.gene91148:intron | 25.0% |
| ! | AAAGCAAAACTAAATCAAAC+AGG | + | chr1.3:22708979-22708998 | MS.gene91148:intron | 25.0% |
| ! | AAATCAGGTTATACTGAAAA+GGG | + | chr1.3:22710070-22710089 | MS.gene91148:CDS | 25.0% |
| ! | AATTCAATAGGAAATAGCTT+TGG | + | chr1.3:22711261-22711280 | MS.gene91148:intron | 25.0% |
| ! | AATTGAATAACCACCAATAT+TGG | + | chr1.3:22709632-22709651 | MS.gene91148:intron | 25.0% |
| ! | ACTATTTGAATTTGACATCA+TGG | - | chr1.3:22708313-22708332 | None:intergenic | 25.0% |
| ! | ACTCCAAAATTAGAAAAACA+CGG | + | chr1.3:22708745-22708764 | MS.gene91148:intron | 25.0% |
| ! | AGAAATTTGGATAAAATAGG+AGG | + | chr1.3:22709695-22709714 | MS.gene91148:intron | 25.0% |
| ! | AGTTTCCAATCACAATTTAA+AGG | - | chr1.3:22707236-22707255 | None:intergenic | 25.0% |
| ! | ATATTACTAATAAGCCACAA+AGG | - | chr1.3:22707748-22707767 | None:intergenic | 25.0% |
| ! | ATTAACAAGAATTTCACCAA+AGG | - | chr1.3:22707645-22707664 | None:intergenic | 25.0% |
| ! | ATTCAAGATATTAAAGCCAT+AGG | - | chr1.3:22710370-22710389 | None:intergenic | 25.0% |
| ! | ATTGACAAAGGTTTAATATC+TGG | + | chr1.3:22708285-22708304 | MS.gene91148:intron | 25.0% |
| ! | ATTGGCAGTAATAATGAATT+TGG | + | chr1.3:22709650-22709669 | MS.gene91148:intron | 25.0% |
| ! | CAATAACAGTTCTGTATTTA+TGG | - | chr1.3:22707536-22707555 | None:intergenic | 25.0% |
| ! | CAATCAAAAGTGATGAATAA+GGG | - | chr1.3:22709005-22709024 | None:intergenic | 25.0% |
| ! | CCTATTGTAATGAATAAATC+AGG | + | chr1.3:22710055-22710074 | MS.gene91148:CDS | 25.0% |
| ! | CCTGATTTATTCATTACAAT+AGG | - | chr1.3:22710058-22710077 | None:intergenic | 25.0% |
| ! | GAAATTTGGATAAAATAGGA+GGG | + | chr1.3:22709696-22709715 | MS.gene91148:intron | 25.0% |
| ! | GTATAGTTAGTATTACAATG+GGG | - | chr1.3:22709160-22709179 | None:intergenic | 25.0% |
| ! | GTTAAGATTATCATATCAGA+TGG | - | chr1.3:22710249-22710268 | None:intergenic | 25.0% |
| ! | TAAACTTTGAATATACCATG+TGG | + | chr1.3:22707399-22707418 | MS.gene91148:intron | 25.0% |
| ! | TAAATCAGGTTATACTGAAA+AGG | + | chr1.3:22710069-22710088 | MS.gene91148:CDS | 25.0% |
| ! | TAATAATTGTTGAGCAAATC+CGG | - | chr1.3:22710280-22710299 | None:intergenic | 25.0% |
| ! | TGATATGATAATCTTAACTG+TGG | + | chr1.3:22710251-22710270 | MS.gene91148:intron | 25.0% |
| ! | TTCATTATTACTGCCAATAT+TGG | - | chr1.3:22709648-22709667 | None:intergenic | 25.0% |
| ! | TTGAAACAGCTTAATAGTAA+TGG | - | chr1.3:22709843-22709862 | None:intergenic | 25.0% |
| ! | TTGACAAAGGTTTAATATCT+GGG | + | chr1.3:22708286-22708305 | MS.gene91148:intron | 25.0% |
| ! | TTGTGGCTTATTAGTAATAT+AGG | + | chr1.3:22707748-22707767 | MS.gene91148:intron | 25.0% |
| !! | AAAGCTATTTCCTATTGAAT+TGG | - | chr1.3:22711262-22711281 | None:intergenic | 25.0% |
| !! | AGTTGTTACTTAAAATCAGA+TGG | - | chr1.3:22707908-22707927 | None:intergenic | 25.0% |
| !! | GATTTGCTCAACAATTATTA+TGG | + | chr1.3:22710280-22710299 | MS.gene91148:intron | 25.0% |
| !! | GCATAATTAATTTGACATCA+TGG | + | chr1.3:22708237-22708256 | MS.gene91148:intron | 25.0% |
| !! | TAGCTGATTTAATTCAACTA+AGG | + | chr1.3:22708023-22708042 | MS.gene91148:CDS | 25.0% |
| !! | TTTCTCTTCATTTTGTATGA+TGG | - | chr1.3:22710393-22710412 | None:intergenic | 25.0% |
| !! | TTTGTTTGTTTCTTTGTTGT+AGG | + | chr1.3:22706828-22706847 | MS.gene91148:intron | 25.0% |
| !! | TTTTGCCATTAATGAGAAAA+TGG | - | chr1.3:22708779-22708798 | None:intergenic | 25.0% |
| !!! | AACAATTTCTTCGTTTTGTT+TGG | - | chr1.3:22706357-22706376 | None:intergenic | 25.0% |
| !!! | AAGAATAAGAGTGGTTTTTT+TGG | - | chr1.3:22706251-22706270 | None:intergenic | 25.0% |
| !!! | AGAATAAGAGTGGTTTTTTT+GGG | - | chr1.3:22706250-22706269 | None:intergenic | 25.0% |
| !!! | AGTTCTTAGCTTTCTTTTTA+CGG | + | chr1.3:22707806-22707825 | MS.gene91148:intron | 25.0% |
| !!! | ATTTGCCATTTTCTCATTAA+TGG | + | chr1.3:22708771-22708790 | MS.gene91148:intron | 25.0% |
| !!! | CAAAAACAGTTTTAAGTGAA+GGG | - | chr1.3:22710822-22710841 | None:intergenic | 25.0% |
| !!! | CTGTATTTATGGTATTTTAG+TGG | - | chr1.3:22707525-22707544 | None:intergenic | 25.0% |
| !!! | GTTTGTTGTTTAATGATACA+TGG | + | chr1.3:22707427-22707446 | MS.gene91148:intron | 25.0% |
| !!! | TATTTTTTGATCTAGAGAGA+TGG | - | chr1.3:22707787-22707806 | None:intergenic | 25.0% |
| !!! | TGGTCAATGTTTTAAATTTC+TGG | + | chr1.3:22707190-22707209 | MS.gene91148:intron | 25.0% |
| !!! | TTGTTTTTGATATACAAGGT+TGG | + | chr1.3:22709067-22709086 | MS.gene91148:intron | 25.0% |
| AAATAGATCTCCAAACACTT+GGG | + | chr1.3:22708545-22708564 | MS.gene91148:intron | 30.0% | |
| AACAACAATATGTTATGAGG+GGG | + | chr1.3:22706982-22707001 | MS.gene91148:intron | 30.0% | |
| AACATATTGTGGGATCTTAA+TGG | - | chr1.3:22709454-22709473 | None:intergenic | 30.0% | |
| AAGAGAAACAGAAACAGAAA+AGG | - | chr1.3:22711088-22711107 | None:intergenic | 30.0% | |
| AAGAGGAAGAGATGAAATTA+AGG | + | chr1.3:22706897-22706916 | MS.gene91148:CDS | 30.0% | |
| AATGTTGTCATGTGATTGAA+AGG | + | chr1.3:22707027-22707046 | MS.gene91148:intron | 30.0% | |
| AATTAAGAAGTGGAGTGATT+AGG | + | chr1.3:22709110-22709129 | MS.gene91148:intron | 30.0% | |
| ACAAAAATGAAGTGATGAAG+AGG | - | chr1.3:22710976-22710995 | None:intergenic | 30.0% | |
| ACATGACATTCAACAGTTTA+AGG | - | chr1.3:22709556-22709575 | None:intergenic | 30.0% | |
| AGGTAATGTCTTCTTAATAC+TGG | + | chr1.3:22708120-22708139 | MS.gene91148:intron | 30.0% | |
| AGTCAAATTTGTCGATACTA+TGG | + | chr1.3:22709725-22709744 | MS.gene91148:intron | 30.0% | |
| ATAATCTTAACTGTGGTTTC+CGG | + | chr1.3:22710258-22710277 | MS.gene91148:intron | 30.0% | |
| ATCCTTATGTTTGTAGGTTT+GGG | + | chr1.3:22709606-22709625 | MS.gene91148:intron | 30.0% | |
| ATTAAATCAGCTACAACATC+AGG | - | chr1.3:22708016-22708035 | None:intergenic | 30.0% | |
| ATTAAGATCCCACAATATGT+TGG | + | chr1.3:22709453-22709472 | MS.gene91148:intron | 30.0% | |
| ATTAATGTTAAGCTTGTGTG+TGG | - | chr1.3:22710496-22710515 | None:intergenic | 30.0% | |
| ATTATTACTGCCAATATTGG+TGG | - | chr1.3:22709645-22709664 | None:intergenic | 30.0% | |
| CAGTGGAGAAAAAAGAAATT+TGG | + | chr1.3:22709682-22709701 | MS.gene91148:intron | 30.0% | |
| CCAATCAAAAGTGATGAATA+AGG | - | chr1.3:22709006-22709025 | None:intergenic | 30.0% | |
| CTACAAACATAAGGATGTAT+GGG | - | chr1.3:22709602-22709621 | None:intergenic | 30.0% | |
| GAACAATAATGTTTCTCAGT+TGG | + | chr1.3:22709787-22709806 | MS.gene91148:intron | 30.0% | |
| GAAGAAGATAAGAATAAGAG+TGG | - | chr1.3:22706260-22706279 | None:intergenic | 30.0% | |
| GAAGCTCTTTATATTGACAA+AGG | + | chr1.3:22708273-22708292 | MS.gene91148:intron | 30.0% | |
| GAATTTGGATAAAATAGCAG+TGG | + | chr1.3:22709665-22709684 | MS.gene91148:intron | 30.0% | |
| TAATTATGTAGTCACCTTTG+TGG | + | chr1.3:22707731-22707750 | MS.gene91148:intron | 30.0% | |
| TAGTGGTATGGTATATTATC+AGG | - | chr1.3:22710345-22710364 | None:intergenic | 30.0% | |
| TCTAGTTAAATGCAGAAGTT+CGG | + | chr1.3:22709980-22709999 | MS.gene91148:intron | 30.0% | |
| TCTTTCACAGGTTACAAAAA+TGG | - | chr1.3:22709428-22709447 | None:intergenic | 30.0% | |
| TTAAATCAGCTACAACATCA+GGG | - | chr1.3:22708015-22708034 | None:intergenic | 30.0% | |
| TTTCTTAGTGAAACTCATCA+AGG | + | chr1.3:22710620-22710639 | MS.gene91148:CDS | 30.0% | |
| TTTGGTTGTGTGTAAAATAC+TGG | + | chr1.3:22710792-22710811 | MS.gene91148:intron | 30.0% | |
| ! | AATTGTTTTCCCTTTCAGAA+AGG | + | chr1.3:22711138-22711157 | MS.gene91148:intron | 30.0% |
| ! | ACAAGAAACGAACCAATTTT+CGG | - | chr1.3:22706595-22706614 | None:intergenic | 30.0% |
| ! | ACTAAGTTGTTTCACTTAGA+TGG | - | chr1.3:22709222-22709241 | None:intergenic | 30.0% |
| ! | AGGGAAAACAATTTCTGAAA+AGG | - | chr1.3:22711131-22711150 | None:intergenic | 30.0% |
| ! | ATCTTGTTCTTTTACCACTA+CGG | - | chr1.3:22709345-22709364 | None:intergenic | 30.0% |
| ! | ATTATTAGGGTTAGTGTTGT+TGG | - | chr1.3:22706330-22706349 | None:intergenic | 30.0% |
| ! | ATTGTTTTCCCTTTCAGAAA+GGG | + | chr1.3:22711139-22711158 | MS.gene91148:intron | 30.0% |
| ! | CAAAAAACCCTTAATTTTGC+AGG | + | chr1.3:22707351-22707370 | MS.gene91148:intron | 30.0% |
| ! | CATAGTGTCGTTGTTTAAAA+GGG | - | chr1.3:22707172-22707191 | None:intergenic | 30.0% |
| ! | CCTTCACTTAAAACTGTTTT+TGG | + | chr1.3:22710820-22710839 | MS.gene91148:intron | 30.0% |
| ! | TCTCCGTGTTTTTCTAATTT+TGG | - | chr1.3:22708751-22708770 | None:intergenic | 30.0% |
| ! | TTAATTTGACATCATGGCTT+AGG | + | chr1.3:22708243-22708262 | MS.gene91148:intron | 30.0% |
| ! | TTTGTTTCTTTGTTGTAGGT+TGG | + | chr1.3:22706832-22706851 | MS.gene91148:intron | 30.0% |
| !! | AACCATTTGATTTGAACCAT+TGG | - | chr1.3:22708393-22708412 | None:intergenic | 30.0% |
| !! | AATTAAGGTTGATGATCTCA+AGG | + | chr1.3:22706912-22706931 | MS.gene91148:CDS | 30.0% |
| !! | ACCATTTGATTTGAACCATT+GGG | - | chr1.3:22708392-22708411 | None:intergenic | 30.0% |
| !! | CCTTATTCATCACTTTTGAT+TGG | + | chr1.3:22709003-22709022 | MS.gene91148:intron | 30.0% |
| !! | GTTCTTAGCTTTCTTTTTAC+GGG | + | chr1.3:22707807-22707826 | MS.gene91148:intron | 30.0% |
| !! | TCTTAATGGATTTCTTTCAC+AGG | - | chr1.3:22709440-22709459 | None:intergenic | 30.0% |
| !! | TTTTTCAGAATCAATAGCCT+TGG | - | chr1.3:22709273-22709292 | None:intergenic | 30.0% |
| !!! | AAAACCCATATTTGCTGTTT+TGG | - | chr1.3:22708708-22708727 | None:intergenic | 30.0% |
| !!! | ATTCTAGAGAGATTTTTGGT+TGG | - | chr1.3:22706188-22706207 | None:intergenic | 30.0% |
| !!! | CACTTAAAACTGTTTTTGGA+GGG | + | chr1.3:22710824-22710843 | MS.gene91148:intron | 30.0% |
| !!! | CCAAAAACAGTTTTAAGTGA+AGG | - | chr1.3:22710823-22710842 | None:intergenic | 30.0% |
| !!! | TCACTTAAAACTGTTTTTGG+AGG | + | chr1.3:22710823-22710842 | MS.gene91148:intron | 30.0% |
| !!! | TTCTAGAGAGATTTTTGGTT+GGG | - | chr1.3:22706187-22706206 | None:intergenic | 30.0% |
| AAAATAAACTTCCACGCACA+AGG | - | chr1.3:22708168-22708187 | None:intergenic | 35.0% | |
| AAACAACGGTTGAGATTGAA+AGG | - | chr1.3:22706213-22706232 | None:intergenic | 35.0% | |
| AAAGGTCTTCTATCTATCTG+AGG | + | chr1.3:22710129-22710148 | MS.gene91148:CDS | 35.0% | |
| AAATGCAATGCTGTGTAAGT+CGG | + | chr1.3:22706858-22706877 | MS.gene91148:CDS | 35.0% | |
| AACAAAACTCCCTTTCTGAA+AGG | - | chr1.3:22711151-22711170 | None:intergenic | 35.0% | |
| AACAACGGTTGAGATTGAAA+GGG | - | chr1.3:22706212-22706231 | None:intergenic | 35.0% | |
| AAGCCCTATGTTAGTCAAAT+AGG | + | chr1.3:22710587-22710606 | MS.gene91148:intron | 35.0% | |
| AAGTTGAAGAAGAACTTCCA+TGG | + | chr1.3:22706384-22706403 | MS.gene91148:CDS | 35.0% | |
| AATAGATCTCCAAACACTTG+GGG | + | chr1.3:22708546-22708565 | MS.gene91148:intron | 35.0% | |
| AATTCCGACCAACATATTGT+GGG | - | chr1.3:22709464-22709483 | None:intergenic | 35.0% | |
| AATTGCTTGTGTAACTGAAC+CGG | - | chr1.3:22706444-22706463 | None:intergenic | 35.0% | |
| AATTTCACCAAAGGTTAGAC+AGG | - | chr1.3:22707636-22707655 | None:intergenic | 35.0% | |
| ACCCAATGGTTCAAATCAAA+TGG | + | chr1.3:22708388-22708407 | MS.gene91148:intron | 35.0% | |
| AGTTAGTATTACAATGGGGT+GGG | - | chr1.3:22709156-22709175 | None:intergenic | 35.0% | |
| ATAACCCCCAAAACAAAATG+AGG | - | chr1.3:22707455-22707474 | None:intergenic | 35.0% | |
| ATAGAAGACCTTTCCAAAGA+GGG | - | chr1.3:22710122-22710141 | None:intergenic | 35.0% | |
| ATCTATTTGACATGCTTGAC+AGG | - | chr1.3:22708533-22708552 | None:intergenic | 35.0% | |
| CAAATAGATCTCCAAACACT+TGG | + | chr1.3:22708544-22708563 | MS.gene91148:intron | 35.0% | |
| CACAAATATTAAGGATTGCG+AGG | - | chr1.3:22707277-22707296 | None:intergenic | 35.0% | |
| CAGGTAACAAAACCAAACAA+AGG | - | chr1.3:22708514-22708533 | None:intergenic | 35.0% | |
| CATCCTTATGTTTGTAGGTT+TGG | + | chr1.3:22709605-22709624 | MS.gene91148:intron | 35.0% | |
| CCATACATCCTTATGTTTGT+AGG | + | chr1.3:22709600-22709619 | MS.gene91148:intron | 35.0% | |
| CCTACAAACATAAGGATGTA+TGG | - | chr1.3:22709603-22709622 | None:intergenic | 35.0% | |
| CTATCACGATGAATTGATGA+TGG | - | chr1.3:22707569-22707588 | None:intergenic | 35.0% | |
| CTGTTCTGTTCCAATTCAAT+AGG | + | chr1.3:22711249-22711268 | MS.gene91148:intron | 35.0% | |
| GATGAGTTTCACTAAGAAAC+CGG | - | chr1.3:22710619-22710638 | None:intergenic | 35.0% | |
| GCAGGTTTATATTGTAGTCA+CGG | + | chr1.3:22707369-22707388 | MS.gene91148:intron | 35.0% | |
| GCTTCGTAGATTGTGATTAA+AGG | + | chr1.3:22706793-22706812 | MS.gene91148:intron | 35.0% | |
| GTAAGACCTAAATAACCAAG+CGG | - | chr1.3:22706515-22706534 | None:intergenic | 35.0% | |
| GTAGGCCTTTAAATTGTGAT+TGG | + | chr1.3:22707228-22707247 | MS.gene91148:intron | 35.0% | |
| GTGCCTATTTGACTAACATA+GGG | - | chr1.3:22710593-22710612 | None:intergenic | 35.0% | |
| GTTTCTCATTCAGAGCATAT+CGG | - | chr1.3:22707985-22708004 | None:intergenic | 35.0% | |
| TAAATCTCTCACAGCAGTAT+AGG | - | chr1.3:22710541-22710560 | None:intergenic | 35.0% | |
| TACAAAGTGAACACAGTTCA+GGG | - | chr1.3:22707321-22707340 | None:intergenic | 35.0% | |
| TAGTTAGTATTACAATGGGG+TGG | - | chr1.3:22709157-22709176 | None:intergenic | 35.0% | |
| TATTAAAGCCATAGGACTAG+TGG | - | chr1.3:22710362-22710381 | None:intergenic | 35.0% | |
| TCTCAAGGCTATTGAGAATA+AGG | + | chr1.3:22706927-22706946 | MS.gene91148:CDS | 35.0% | |
| TGGTCATTTATGCCTTTGTT+TGG | + | chr1.3:22708499-22708518 | MS.gene91148:intron | 35.0% | |
| TTCCCAAACCTACAAACATA+AGG | - | chr1.3:22709611-22709630 | None:intergenic | 35.0% | |
| TTCCTTTGGGTAACATTGAA+GGG | + | chr1.3:22708473-22708492 | MS.gene91148:intron | 35.0% | |
| TTGTTCTCCTCTCTTCATAT+CGG | + | chr1.3:22710992-22711011 | MS.gene91148:CDS | 35.0% | |
| TTGTTGTACGTACAATGAAG+AGG | - | chr1.3:22710913-22710932 | None:intergenic | 35.0% | |
| ! | AATGAAGAGGTTGTGTTTTG+CGG | - | chr1.3:22710900-22710919 | None:intergenic | 35.0% |
| ! | ACAAAACTCCCTTTCTGAAA+GGG | - | chr1.3:22711150-22711169 | None:intergenic | 35.0% |
| ! | ATTCATATCCAGACAGGTTT+TGG | + | chr1.3:22707932-22707951 | MS.gene91148:intron | 35.0% |
| ! | CATTTTTACCAATTGCAGCA+AGG | - | chr1.3:22707011-22707030 | None:intergenic | 35.0% |
| ! | CCATAGTGTCGTTGTTTAAA+AGG | - | chr1.3:22707173-22707192 | None:intergenic | 35.0% |
| ! | CCTTTTAAACAACGACACTA+TGG | + | chr1.3:22707170-22707189 | MS.gene91148:intron | 35.0% |
| ! | GTTGCTTCTGAGTGATTTTA+GGG | - | chr1.3:22710871-22710890 | None:intergenic | 35.0% |
| ! | TGAACCATTGGGTAATTTGT+AGG | - | chr1.3:22708381-22708400 | None:intergenic | 35.0% |
| ! | TGGTTATGCTTTTGTGTAGT+AGG | + | chr1.3:22707210-22707229 | MS.gene91148:intron | 35.0% |
| ! | TTGTGCGTGGAAGTTTATTT+TGG | + | chr1.3:22708167-22708186 | MS.gene91148:intron | 35.0% |
| ! | TTTGATATACAAGGTTGGCT+TGG | + | chr1.3:22709072-22709091 | MS.gene91148:intron | 35.0% |
| !! | AGAGCTTTTTCTTGAATCCA+TGG | - | chr1.3:22706404-22706423 | None:intergenic | 35.0% |
| !! | GATGTATGGGTTGATTTACT+GGG | - | chr1.3:22709589-22709608 | None:intergenic | 35.0% |
| !! | TCTCAGTTGGTAGCATATTT+GGG | + | chr1.3:22709800-22709819 | MS.gene91148:intron | 35.0% |
| !! | TGTTGCTTCTGAGTGATTTT+AGG | - | chr1.3:22710872-22710891 | None:intergenic | 35.0% |
| !! | TTCTCAGTTGGTAGCATATT+TGG | + | chr1.3:22709799-22709818 | MS.gene91148:intron | 35.0% |
| !!! | ATAAGAGTGGTTTTTTTGGG+TGG | - | chr1.3:22706247-22706266 | None:intergenic | 35.0% |
| !!! | ATGGCTCCTCATTTTGTTTT+GGG | + | chr1.3:22707446-22707465 | MS.gene91148:intron | 35.0% |
| !!! | GAAATTGTTTTAGGGAGATG+TGG | + | chr1.3:22710315-22710334 | MS.gene91148:intron | 35.0% |
| !!! | GTGGAAGTTTATTTTGGCTT+AGG | + | chr1.3:22708173-22708192 | MS.gene91148:intron | 35.0% |
| AACAACAAACAGTGACCACA+TGG | - | chr1.3:22707417-22707436 | None:intergenic | 40.0% | |
| AAGAAGTGGAGTGATTAGGA+GGG | + | chr1.3:22709114-22709133 | MS.gene91148:intron | 40.0% | |
| AATGGACCGATACAGAATCA+CGG | + | chr1.3:22709906-22709925 | MS.gene91148:intron | 40.0% | |
| ACAACGGTTGAGATTGAAAG+GGG | - | chr1.3:22706211-22706230 | None:intergenic | 40.0% | |
| ACTTATCTGACCAATGTCAC+AGG | + | chr1.3:22709527-22709546 | MS.gene91148:intron | 40.0% | |
| AGATCCCACAATATGTTGGT+CGG | + | chr1.3:22709457-22709476 | MS.gene91148:intron | 40.0% | |
| AGCCTCTTGTGTAAATAACC+GGG | + | chr1.3:22707073-22707092 | MS.gene91148:intron | 40.0% | |
| AGGCTATTGAGAATAAGGTG+AGG | + | chr1.3:22706932-22706951 | MS.gene91148:intron | 40.0% | |
| AGTTTCACTAAGAAACCGGT+GGG | - | chr1.3:22710615-22710634 | None:intergenic | 40.0% | |
| ATACCATACCACTAGTCCTA+TGG | + | chr1.3:22710351-22710370 | MS.gene91148:intron | 40.0% | |
| ATATCAGAGTCTATCCTTGC+AGG | - | chr1.3:22709505-22709524 | None:intergenic | 40.0% | |
| ATGTTGGTCGGAATTGCTAA+AGG | + | chr1.3:22709469-22709488 | MS.gene91148:intron | 40.0% | |
| CAATTCCGACCAACATATTG+TGG | - | chr1.3:22709465-22709484 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAATAAC+CGG | + | chr1.3:22707072-22707091 | MS.gene91148:intron | 40.0% | |
| CATGTTCCGTGATTCTGTAT+CGG | - | chr1.3:22709915-22709934 | None:intergenic | 40.0% | |
| CGTACAATAGACCAAATGGT+GGG | + | chr1.3:22707104-22707123 | MS.gene91148:intron | 40.0% | |
| CTACAAAGTGAACACAGTTC+AGG | - | chr1.3:22707322-22707341 | None:intergenic | 40.0% | |
| CTGCAAATTCATATCCAGAC+AGG | + | chr1.3:22707926-22707945 | MS.gene91148:intron | 40.0% | |
| CTTGACCTTGTTGAATTCAC+CGG | + | chr1.3:22706422-22706441 | MS.gene91148:CDS | 40.0% | |
| CTTGTGTAAATAACCGGGAA+AGG | + | chr1.3:22707078-22707097 | MS.gene91148:intron | 40.0% | |
| GACTCCTACAAATTACCCAA+TGG | + | chr1.3:22708374-22708393 | MS.gene91148:intron | 40.0% | |
| GAGCGAAAAGTAGTTCCTTT+GGG | + | chr1.3:22708460-22708479 | MS.gene91148:intron | 40.0% | |
| GATAGAAGACCTTTCCAAAG+AGG | - | chr1.3:22710123-22710142 | None:intergenic | 40.0% | |
| GGTGCCTATTTGACTAACAT+AGG | - | chr1.3:22710594-22710613 | None:intergenic | 40.0% | |
| GTCATGTGATTGAAAGGTCA+CGG | + | chr1.3:22707033-22707052 | MS.gene91148:intron | 40.0% | |
| GTTAGTATTACAATGGGGTG+GGG | - | chr1.3:22709155-22709174 | None:intergenic | 40.0% | |
| GTTCCTTTGGGTAACATTGA+AGG | + | chr1.3:22708472-22708491 | MS.gene91148:intron | 40.0% | |
| TAAAGATACAACTCAGCTGG+TGG | - | chr1.3:22709405-22709424 | None:intergenic | 40.0% | |
| TAAGAAGTGGAGTGATTAGG+AGG | + | chr1.3:22709113-22709132 | MS.gene91148:intron | 40.0% | |
| TAGTGAAACTCATCAAGGTG+AGG | + | chr1.3:22710625-22710644 | MS.gene91148:CDS | 40.0% | |
| TATCAGAGTCTATCCTTGCA+GGG | - | chr1.3:22709504-22709523 | None:intergenic | 40.0% | |
| TCAGTTACACAAGCAATTCC+TGG | + | chr1.3:22706446-22706465 | MS.gene91148:CDS | 40.0% | |
| TCATGTGATTGAAAGGTCAC+GGG | + | chr1.3:22707034-22707053 | MS.gene91148:intron | 40.0% | |
| TGGAGTCTTGGGAAAAACAA+CGG | - | chr1.3:22706227-22706246 | None:intergenic | 40.0% | |
| TGGTAAAGATACAACTCAGC+TGG | - | chr1.3:22709408-22709427 | None:intergenic | 40.0% | |
| TTAGTATTACAATGGGGTGG+GGG | - | chr1.3:22709154-22709173 | None:intergenic | 40.0% | |
| TTCCCGGTTATTTACACAAG+AGG | - | chr1.3:22707078-22707097 | None:intergenic | 40.0% | |
| TTTCGATGATGCTGAAGCAA+CGG | - | chr1.3:22706300-22706319 | None:intergenic | 40.0% | |
| TTTGTCTTCCTGTGCAAATG+TGG | + | chr1.3:22707882-22707901 | MS.gene91148:intron | 40.0% | |
| ! | CTGGACACAGTTTTCATTTG+AGG | + | chr1.3:22708139-22708158 | MS.gene91148:intron | 40.0% |
| ! | GAATCAATAGCCTTGGACTT+TGG | - | chr1.3:22709266-22709285 | None:intergenic | 40.0% |
| ! | GTCTTCTATCTATCTGAGGT+AGG | + | chr1.3:22710133-22710152 | MS.gene91148:intron | 40.0% |
| ! | TCTTTTGCCTGTCTAACCTT+TGG | + | chr1.3:22707626-22707645 | MS.gene91148:intron | 40.0% |
| !! | ATGGGTTGATTTACTGGGAA+GGG | - | chr1.3:22709584-22709603 | None:intergenic | 40.0% |
| !! | CATCACTTTTGATTGGCCAT+TGG | + | chr1.3:22709010-22709029 | MS.gene91148:intron | 40.0% |
| !! | CATGGCTCCTCATTTTGTTT+TGG | + | chr1.3:22707445-22707464 | MS.gene91148:intron | 40.0% |
| !! | GCTCGAAGGTACTAATGAAT+AGG | - | chr1.3:22708444-22708463 | None:intergenic | 40.0% |
| !! | GGATGTATGGGTTGATTTAC+TGG | - | chr1.3:22709590-22709609 | None:intergenic | 40.0% |
| !! | GGGGATTCTAGAGAGATTTT+TGG | - | chr1.3:22706192-22706211 | None:intergenic | 40.0% |
| !! | TATGGGTTGATTTACTGGGA+AGG | - | chr1.3:22709585-22709604 | None:intergenic | 40.0% |
| !!! | AGAGATTTTTGGTTGGGAGA+GGG | - | chr1.3:22706181-22706200 | None:intergenic | 40.0% |
| !!! | GCATCGCTTTTTGTCAGTTT+TGG | - | chr1.3:22710702-22710721 | None:intergenic | 40.0% |
| !!! | GTTTTTTTGGGTGGAGTCTT+GGG | - | chr1.3:22706238-22706257 | None:intergenic | 40.0% |
| !!! | TATCCAGACAGGTTTTGGTT+TGG | + | chr1.3:22707937-22707956 | MS.gene91148:intron | 40.0% |
| !!! | TGATGAAGAGGTTGCTTTTG+TGG | - | chr1.3:22710964-22710983 | None:intergenic | 40.0% |
| !!! | TGGCTCCTCATTTTGTTTTG+GGG | + | chr1.3:22707447-22707466 | MS.gene91148:intron | 40.0% |
| ATTTGAGGAATCCTTGTGCG+TGG | + | chr1.3:22708154-22708173 | MS.gene91148:intron | 45.0% | |
| CAAGAGAAAACTAGCCGTTC+AGG | + | chr1.3:22710096-22710115 | MS.gene91148:CDS | 45.0% | |
| CCTCTCTTCATATCGGAAAC+AGG | + | chr1.3:22710999-22711018 | MS.gene91148:CDS | 45.0% | |
| CCTGTTTCCGATATGAAGAG+AGG | - | chr1.3:22711002-22711021 | None:intergenic | 45.0% | |
| CGAAGAATTGTGCGAGACAA+AGG | + | chr1.3:22708100-22708119 | MS.gene91148:CDS | 45.0% | |
| CGAGCGAAAAGTAGTTCCTT+TGG | + | chr1.3:22708459-22708478 | MS.gene91148:intron | 45.0% | |
| CGTTGTTTAAAAGGGCAACC+CGG | - | chr1.3:22707164-22707183 | None:intergenic | 45.0% | |
| CTATGTGTCAGCGTTGTGTT+CGG | + | chr1.3:22706757-22706776 | MS.gene91148:intron | 45.0% | |
| CTGAACCGGTGAATTCAACA+AGG | - | chr1.3:22706430-22706449 | None:intergenic | 45.0% | |
| CTTCCAAACCAAAACCTGTC+TGG | - | chr1.3:22707943-22707962 | None:intergenic | 45.0% | |
| CTTCTGATGGAAGACGTGTT+CGG | + | chr1.3:22706661-22706680 | MS.gene91148:intron | 45.0% | |
| GAAACTCATCAAGGTGAGGT+GGG | + | chr1.3:22710629-22710648 | MS.gene91148:CDS | 45.0% | |
| GACCCTTCAATGTTACCCAA+AGG | - | chr1.3:22708478-22708497 | None:intergenic | 45.0% | |
| GAGTTTCACTAAGAAACCGG+TGG | - | chr1.3:22710616-22710635 | None:intergenic | 45.0% | |
| GCGTACAATAGACCAAATGG+TGG | + | chr1.3:22707103-22707122 | MS.gene91148:intron | 45.0% | |
| GCTACAACATCAGGGTTGAA+TGG | - | chr1.3:22708007-22708026 | None:intergenic | 45.0% | |
| GCTGCGTACAATAGACCAAA+TGG | + | chr1.3:22707100-22707119 | MS.gene91148:intron | 45.0% | |
| GCTGTTCCGCTTGGTTATTT+AGG | + | chr1.3:22706506-22706525 | MS.gene91148:CDS | 45.0% | |
| GGGTCAATAGAAGGTCAAAG+CGG | + | chr1.3:22710762-22710781 | MS.gene91148:intron | 45.0% | |
| GGTCAATAGAAGGTCAAAGC+GGG | + | chr1.3:22710763-22710782 | MS.gene91148:intron | 45.0% | |
| GTGGATGAGTTGTTGCAAAG+AGG | + | chr1.3:22706880-22706899 | MS.gene91148:CDS | 45.0% | |
| TGAAACTCATCAAGGTGAGG+TGG | + | chr1.3:22710628-22710647 | MS.gene91148:CDS | 45.0% | |
| TGAAGCAACGGTTGAGATTG+AGG | - | chr1.3:22706288-22706307 | None:intergenic | 45.0% | |
| TGCTAACCAGTAGAGTCACA+AGG | + | chr1.3:22710562-22710581 | MS.gene91148:intron | 45.0% | |
| TGGGTAACATTGAAGGGTCT+TGG | + | chr1.3:22708479-22708498 | MS.gene91148:intron | 45.0% | |
| TTAGTCAAATAGGCACCCAC+CGG | + | chr1.3:22710597-22710616 | MS.gene91148:intron | 45.0% | |
| ! | AAGCCATAGGACTAGTGGTA+TGG | - | chr1.3:22710357-22710376 | None:intergenic | 45.0% |
| ! | AATAGCCTTGGACTTTGGCA+AGG | - | chr1.3:22709261-22709280 | None:intergenic | 45.0% |
| ! | AGAGGCTTTTCTCAAAGAGG+GGG | - | chr1.3:22709315-22709334 | None:intergenic | 45.0% |
| ! | AGCAGAGGCTTTTCTCAAAG+AGG | - | chr1.3:22709318-22709337 | None:intergenic | 45.0% |
| ! | CAGAGGCTTTTCTCAAAGAG+GGG | - | chr1.3:22709316-22709335 | None:intergenic | 45.0% |
| ! | CTTTTCTCAAAGAGGGGGAA+GGG | - | chr1.3:22709310-22709329 | None:intergenic | 45.0% |
| ! | GCAGAGGCTTTTCTCAAAGA+GGG | - | chr1.3:22709317-22709336 | None:intergenic | 45.0% |
| ! | GTACTGACACACACTTCTGA+TGG | + | chr1.3:22706648-22706667 | MS.gene91148:intron | 45.0% |
| ! | TTTAAGGCAGCCTGTGACAT+TGG | - | chr1.3:22709540-22709559 | None:intergenic | 45.0% |
| ! | TTTTCTCAAAGAGGGGGAAG+GGG | - | chr1.3:22709309-22709328 | None:intergenic | 45.0% |
| !! | AGCTTTCTTTTTACGGGCTG+AGG | + | chr1.3:22707813-22707832 | MS.gene91148:intron | 45.0% |
| !! | AGGAACTACTTTTCGCTCGA+AGG | - | chr1.3:22708458-22708477 | None:intergenic | 45.0% |
| !! | GATATACAAGGTTGGCTTGG+TGG | + | chr1.3:22709075-22709094 | MS.gene91148:intron | 45.0% |
| !!! | GAGAGATTTTTGGTTGGGAG+AGG | - | chr1.3:22706182-22706201 | None:intergenic | 45.0% |
| !!! | GGCTCCTCATTTTGTTTTGG+GGG | + | chr1.3:22707448-22707467 | MS.gene91148:intron | 45.0% |
| !!! | GGTTTTTTTGGGTGGAGTCT+TGG | - | chr1.3:22706239-22706258 | None:intergenic | 45.0% |
| AAGGCTGTAGAATCCCTGCA+AGG | + | chr1.3:22709488-22709507 | MS.gene91148:intron | 50.0% | |
| AGAATCCACGGCAACGAAGT+GGG | - | chr1.3:22706485-22706504 | None:intergenic | 50.0% | |
| CACATGTGTCAGTGTCACGT+CGG | - | chr1.3:22706694-22706713 | None:intergenic | 50.0% | |
| CTATTGTACGCAGCCTTTCC+CGG | - | chr1.3:22707094-22707113 | None:intergenic | 50.0% | |
| CTTTCCAAAGAGGGCCTGAA+CGG | - | chr1.3:22710113-22710132 | None:intergenic | 50.0% | |
| GCTTTGCCTTGTGACTCTAC+TGG | - | chr1.3:22710571-22710590 | None:intergenic | 50.0% | |
| GGGGTGGAGGAATTAAGAAG+TGG | + | chr1.3:22709100-22709119 | MS.gene91148:intron | 50.0% | |
| TACCACTACGGATCTAGCAG+AGG | - | chr1.3:22709333-22709352 | None:intergenic | 50.0% | |
| TCAAACAGGCCCCAAGTGTT+TGG | - | chr1.3:22708558-22708577 | None:intergenic | 50.0% | |
| TCAGATGGCCACATTTGCAC+AGG | - | chr1.3:22707893-22707912 | None:intergenic | 50.0% | |
| TGCAATGCTGTGTAAGTCGG+TGG | + | chr1.3:22706861-22706880 | MS.gene91148:CDS | 50.0% | |
| TGGAGTGATTAGGAGGGAGA+GGG | + | chr1.3:22709120-22709139 | MS.gene91148:intron | 50.0% | |
| ! | AATTTTCGGCGCTGCGCTTT+GGG | - | chr1.3:22706581-22706600 | None:intergenic | 50.0% |
| ! | ATGCGGGAGCTTTAATGCAC+CGG | + | chr1.3:22707142-22707161 | MS.gene91148:intron | 50.0% |
| ! | GCTTTTCTCAAAGAGGGGGA+AGG | - | chr1.3:22709311-22709330 | None:intergenic | 50.0% |
| ! | GGTCAAAGCGGGCACAATTT+TGG | + | chr1.3:22710774-22710793 | MS.gene91148:intron | 50.0% |
| !! | ACAAGGTTGGCTTGGTGGTT+GGG | + | chr1.3:22709080-22709099 | MS.gene91148:intron | 50.0% |
| !! | TACAAGGTTGGCTTGGTGGT+TGG | + | chr1.3:22709079-22709098 | MS.gene91148:intron | 50.0% |
| AGAGAAGGGGTCCCACCATT+TGG | - | chr1.3:22707118-22707137 | None:intergenic | 55.0% | |
| AGCAATTCCTGGTCCACGAG+TGG | + | chr1.3:22706457-22706476 | MS.gene91148:CDS | 55.0% | |
| AGCCTCTGCTAGATCCGTAG+TGG | + | chr1.3:22709328-22709347 | MS.gene91148:intron | 55.0% | |
| AGCCTTGGACTTTGGCAAGG+TGG | - | chr1.3:22709258-22709277 | None:intergenic | 55.0% | |
| AGCGATGCAGCGCTACAAAG+CGG | + | chr1.3:22710714-22710733 | MS.gene91148:CDS | 55.0% | |
| AGCGGAACAGCGAGAATCCA+CGG | - | chr1.3:22706497-22706516 | None:intergenic | 55.0% | |
| AGCTCCCGCATACTCAGAGA+AGG | - | chr1.3:22707133-22707152 | None:intergenic | 55.0% | |
| CTCCCGCATACTCAGAGAAG+GGG | - | chr1.3:22707131-22707150 | None:intergenic | 55.0% | |
| GACCCCTTCTCTGAGTATGC+GGG | + | chr1.3:22707126-22707145 | MS.gene91148:intron | 55.0% | |
| GAGAATCCACGGCAACGAAG+TGG | - | chr1.3:22706486-22706505 | None:intergenic | 55.0% | |
| GCAATTCCTGGTCCACGAGT+GGG | + | chr1.3:22706458-22706477 | MS.gene91148:CDS | 55.0% | |
| GCTCCCGCATACTCAGAGAA+GGG | - | chr1.3:22707132-22707151 | None:intergenic | 55.0% | |
| GGACCCCTTCTCTGAGTATG+CGG | + | chr1.3:22707125-22707144 | MS.gene91148:intron | 55.0% | |
| GGGGGTAACCTTGCTGCAAT+TGG | + | chr1.3:22707000-22707019 | MS.gene91148:intron | 55.0% | |
| GGTTGGGAGAGGGAGAAAGT+GGG | - | chr1.3:22706171-22706190 | None:intergenic | 55.0% | |
| GTGGAGTGATTAGGAGGGAG+AGG | + | chr1.3:22709119-22709138 | MS.gene91148:intron | 55.0% | |
| TGCCACCTTGCCAAAGTCCA+AGG | + | chr1.3:22709253-22709272 | MS.gene91148:intron | 55.0% | |
| TGGACTTTGGCAAGGTGGCA+TGG | - | chr1.3:22709253-22709272 | None:intergenic | 55.0% | |
| TGGATTCTCGCTGTTCCGCT+TGG | + | chr1.3:22706497-22706516 | MS.gene91148:CDS | 55.0% | |
| TGGTTGGGAGAGGGAGAAAG+TGG | - | chr1.3:22706172-22706191 | None:intergenic | 55.0% | |
| TTTGGAGAAAGCGGGCGAAG+CGG | + | chr1.3:22710741-22710760 | MS.gene91148:CDS | 55.0% | |
| ! | AGCGGAGCGTTTGGAGAAAG+CGG | + | chr1.3:22710732-22710751 | MS.gene91148:CDS | 55.0% |
| ! | CAAAGCGCAGCGCCGAAAAT+TGG | + | chr1.3:22706580-22706599 | MS.gene91148:CDS | 55.0% |
| ! | CAATTTTCGGCGCTGCGCTT+TGG | - | chr1.3:22706582-22706601 | None:intergenic | 55.0% |
| ! | CGTTCAGGCCCTCTTTGGAA+AGG | + | chr1.3:22710111-22710130 | MS.gene91148:CDS | 55.0% |
| ! | TGCGGGAGCTTTAATGCACC+GGG | + | chr1.3:22707143-22707162 | MS.gene91148:intron | 55.0% |
| !! | CAAGGTTGGCTTGGTGGTTG+GGG | + | chr1.3:22709081-22709100 | MS.gene91148:intron | 55.0% |
| !! | TGGAAGACGTGTTCGGTGTC+AGG | + | chr1.3:22706668-22706687 | MS.gene91148:intron | 55.0% |
| AACGAAGTGGGACCCACTCG+TGG | - | chr1.3:22706473-22706492 | None:intergenic | 60.0% | |
| CTAGCCGTTCAGGCCCTCTT+TGG | + | chr1.3:22710106-22710125 | MS.gene91148:CDS | 60.0% | |
| GGGCGAAGCGGGTCAATAGA+AGG | + | chr1.3:22710753-22710772 | MS.gene91148:intron | 60.0% | |
| GGGGAAGGGGTTCAGTTGCA+TGG | - | chr1.3:22709296-22709315 | None:intergenic | 60.0% | |
| GTCAATAGCCGCCGCTACTG+CGG | + | chr1.3:22710666-22710685 | MS.gene91148:CDS | 60.0% | |
| TTGGAGAAAGCGGGCGAAGC+GGG | + | chr1.3:22710742-22710761 | MS.gene91148:CDS | 60.0% | |
| ! | GCGCTACAAAGCGGAGCGTT+TGG | + | chr1.3:22710723-22710742 | MS.gene91148:CDS | 60.0% |
| ! | GCGGAGCGTTTGGAGAAAGC+GGG | + | chr1.3:22710733-22710752 | MS.gene91148:CDS | 60.0% |
| TGGGTCCCACTTCGTTGCCG+TGG | + | chr1.3:22706477-22706496 | MS.gene91148:CDS | 65.0% | |
| !! | GGTTGGCTTGGTGGTTGGGG+TGG | + | chr1.3:22709084-22709103 | MS.gene91148:intron | 65.0% |
| !! | TGGCTTGGTGGTTGGGGTGG+AGG | + | chr1.3:22709087-22709106 | MS.gene91148:intron | 65.0% |
| ACTCCGCACCGCAGTAGCGG+CGG | - | chr1.3:22710677-22710696 | None:intergenic | 70.0% | |
| GCCACTCCGCACCGCAGTAG+CGG | - | chr1.3:22710680-22710699 | None:intergenic | 70.0% | |
| GTGGGACCCACTCGTGGACC+AGG | - | chr1.3:22706467-22706486 | None:intergenic | 70.0% | |
| TAGCCGCCGCTACTGCGGTG+CGG | + | chr1.3:22710671-22710690 | MS.gene91148:CDS | 70.0% | |
| GCCGCTACTGCGGTGCGGAG+TGG | + | chr1.3:22710676-22710695 | MS.gene91148:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 22706140 | 22711290 | 22706140 | ID=MS.gene91148 |
| chr1.3 | mRNA | 22706140 | 22711290 | 22706140 | ID=MS.gene91148.t1;Parent=MS.gene91148 |
| chr1.3 | exon | 22706140 | 22706601 | 22706140 | ID=MS.gene91148.t1.exon1;Parent=MS.gene91148.t1 |
| chr1.3 | CDS | 22706140 | 22706601 | 22706140 | ID=cds.MS.gene91148.t1;Parent=MS.gene91148.t1 |
| chr1.3 | exon | 22706850 | 22706948 | 22706850 | ID=MS.gene91148.t1.exon2;Parent=MS.gene91148.t1 |
| chr1.3 | CDS | 22706850 | 22706948 | 22706850 | ID=cds.MS.gene91148.t1;Parent=MS.gene91148.t1 |
| chr1.3 | exon | 22707944 | 22708121 | 22707944 | ID=MS.gene91148.t1.exon3;Parent=MS.gene91148.t1 |
| chr1.3 | CDS | 22707944 | 22708121 | 22707944 | ID=cds.MS.gene91148.t1;Parent=MS.gene91148.t1 |
| chr1.3 | exon | 22710053 | 22710150 | 22710053 | ID=MS.gene91148.t1.exon4;Parent=MS.gene91148.t1 |
| chr1.3 | CDS | 22710053 | 22710150 | 22710053 | ID=cds.MS.gene91148.t1;Parent=MS.gene91148.t1 |
| chr1.3 | exon | 22710609 | 22710763 | 22710609 | ID=MS.gene91148.t1.exon5;Parent=MS.gene91148.t1 |
| chr1.3 | CDS | 22710609 | 22710763 | 22710609 | ID=cds.MS.gene91148.t1;Parent=MS.gene91148.t1 |
| chr1.3 | exon | 22710884 | 22711020 | 22710884 | ID=MS.gene91148.t1.exon6;Parent=MS.gene91148.t1 |
| chr1.3 | CDS | 22710884 | 22711020 | 22710884 | ID=cds.MS.gene91148.t1;Parent=MS.gene91148.t1 |
| chr1.3 | exon | 22711271 | 22711290 | 22711271 | ID=MS.gene91148.t1.exon7;Parent=MS.gene91148.t1 |
| chr1.3 | CDS | 22711271 | 22711290 | 22711271 | ID=cds.MS.gene91148.t1;Parent=MS.gene91148.t1 |
| Gene Sequence |
| Protein sequence |
