Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91188.t1 | XP_003588429.1 | 96.1 | 514 | 18 | 1 | 1 | 514 | 1 | 512 | 1.90E-269 | 937.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91188.t1 | Q68EH9 | 34.8 | 161 | 104 | 1 | 355 | 514 | 213 | 373 | 7.4e-20 | 100.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91188.t1 | G7I262 | 96.1 | 514 | 18 | 1 | 1 | 514 | 1 | 512 | 1.4e-269 | 937.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene91188 | 0.802052 | 6.74E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91188.t1 | MTR_1g007160 | 96.109 | 514 | 18 | 1 | 1 | 514 | 1 | 512 | 0.0 | 1016 |
| MS.gene91188.t1 | MTR_3g110340 | 61.431 | 503 | 151 | 10 | 18 | 514 | 19 | 484 | 0.0 | 560 |
| MS.gene91188.t1 | MTR_3g110340 | 61.431 | 503 | 151 | 10 | 18 | 514 | 19 | 484 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91188.t1 | AT2G25740 | 53.965 | 517 | 218 | 6 | 3 | 514 | 2 | 503 | 2.78e-173 | 499 |
| MS.gene91188.t1 | AT2G25740 | 55.955 | 445 | 183 | 5 | 75 | 514 | 2 | 438 | 1.91e-165 | 477 |
Find 117 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTCACTTTCCTCGTTTA+AGG | 0.119107 | 1.3:-12270338 | None:intergenic |
| TCAGGAGTTGTGCTCTTTCC+TGG | 0.184844 | 1.3:+12268688 | MS.gene91188:intron |
| TACAAAATATAGTTGGTTTC+CGG | 0.206516 | 1.3:+12272740 | MS.gene91188:CDS |
| ATCTACAAGGCAGGAGCTTT+TGG | 0.232171 | 1.3:+12272256 | MS.gene91188:CDS |
| CCATCAGAGAAGGGCTTAAT+TGG | 0.255033 | 1.3:+12270611 | MS.gene91188:CDS |
| CTCAACAGCAGCCACAAAAT+TGG | 0.255978 | 1.3:-12268740 | None:intergenic |
| CCTTCAATGTATTCTGTTGA+TGG | 0.266125 | 1.3:+12270307 | MS.gene91188:CDS |
| TGGGATGTTTCTTAGCCTTA+TGG | 0.277487 | 1.3:+12270178 | MS.gene91188:intron |
| ATAGGGAGCTGTTCCTCTTC+TGG | 0.290687 | 1.3:+12270577 | MS.gene91188:CDS |
| AGCATCCTTACATACATATC+TGG | 0.290747 | 1.3:+12267849 | MS.gene91188:CDS |
| GCAAATGGATTAGCTCTAAC+TGG | 0.318248 | 1.3:+12272708 | MS.gene91188:CDS |
| GCTGGAGAATTTGCTCGATT+TGG | 0.331253 | 1.3:-12266520 | None:intergenic |
| CGAACTCCAAGGGATGCTTT+TGG | 0.340355 | 1.3:+12270235 | MS.gene91188:CDS |
| CAGGAGTTGTGCTCTTTCCT+GGG | 0.344746 | 1.3:+12268689 | MS.gene91188:intron |
| ACAAAATATAGTTGGTTTCC+GGG | 0.353288 | 1.3:+12272741 | MS.gene91188:CDS |
| CTCCTATTTGCTTGCACAAA+GGG | 0.372296 | 1.3:+12270714 | MS.gene91188:CDS |
| AAGAGCATTCTTGCCTGGTT+GGG | 0.374410 | 1.3:+12270675 | MS.gene91188:CDS |
| GAAAATCTGGATTCTAGAAT+AGG | 0.375236 | 1.3:+12270559 | MS.gene91188:CDS |
| GGCGTCTGGTGTATTTAGAT+TGG | 0.385908 | 1.3:-12270500 | None:intergenic |
| TGCCTTGTAGATTCAGAAAC+AGG | 0.392651 | 1.3:-12272245 | None:intergenic |
| TAATACAATAGTCCTGGTTA+TGG | 0.393385 | 1.3:+12267781 | MS.gene91188:intron |
| GCATTTACATACGCACCAAC+AGG | 0.399570 | 1.3:-12272648 | None:intergenic |
| GTTGCAAGGAAGATTACTTA+AGG | 0.430591 | 1.3:-12270269 | None:intergenic |
| TGATTCATCATATTCAAAAC+TGG | 0.431365 | 1.3:-12270425 | None:intergenic |
| AAAATCTGGATTCTAGAATA+GGG | 0.431861 | 1.3:+12270560 | MS.gene91188:CDS |
| ACGACTTTGTACAAGGCAAA+TGG | 0.435116 | 1.3:+12272693 | MS.gene91188:CDS |
| CAGCACTTACAAAATATAGT+TGG | 0.442633 | 1.3:+12272733 | MS.gene91188:CDS |
| GTCAGGTAGCAATGGTGTTA+AGG | 0.447046 | 1.3:-12270521 | None:intergenic |
| AGCAATGGTGTTAAGGCGTC+TGG | 0.451633 | 1.3:-12270514 | None:intergenic |
| TGGCACCGCAGGCGTCGTCC+CGG | 0.453194 | 1.3:+12267801 | MS.gene91188:CDS |
| AGCCCTTTGTGCAAGCAAAT+AGG | 0.456513 | 1.3:-12270716 | None:intergenic |
| ATAGAAAATGATAAAACATC+AGG | 0.465475 | 1.3:-12272209 | None:intergenic |
| AATGTATTCTGTTGATGGAC+AGG | 0.466136 | 1.3:+12270312 | MS.gene91188:CDS |
| TTGCTTGCACAAAGGGCTGC+AGG | 0.469589 | 1.3:+12270721 | MS.gene91188:CDS |
| TTGCAAGGAAGATTACTTAA+GGG | 0.474428 | 1.3:-12270268 | None:intergenic |
| CAAGAGCATTCTTGCCTGGT+TGG | 0.476744 | 1.3:+12270674 | MS.gene91188:CDS |
| CCAATTAAGCCCTTCTCTGA+TGG | 0.476760 | 1.3:-12270611 | None:intergenic |
| TTGCGGTATCGCTGAAAACT+CGG | 0.488849 | 1.3:-12268915 | None:intergenic |
| ATTTCAAGAGCATTCTTGCC+TGG | 0.489166 | 1.3:+12270670 | MS.gene91188:CDS |
| GGATGAAAACTGCAAGCATT+GGG | 0.496384 | 1.3:+12268944 | MS.gene91188:CDS |
| CCTACCACGCCAATGGTGTA+AGG | 0.498310 | 1.3:-12268787 | None:intergenic |
| GAAATTCTATGTGAGGAGTA+GGG | 0.499323 | 1.3:-12270652 | None:intergenic |
| TGAAATTCTATGTGAGGAGT+AGG | 0.500143 | 1.3:-12270653 | None:intergenic |
| TGGAGAGATCCAAATTATTG+AGG | 0.501224 | 1.3:+12270198 | MS.gene91188:CDS |
| TTAACAAGAGCATCCATGCT+TGG | 0.501936 | 1.3:-12272182 | None:intergenic |
| CCATCAACAGAATACATTGA+AGG | 0.504053 | 1.3:-12270307 | None:intergenic |
| AGGATGAAAACTGCAAGCAT+TGG | 0.505302 | 1.3:+12268943 | MS.gene91188:CDS |
| ATTGGATTCAATAACTCTCA+AGG | 0.506992 | 1.3:-12268722 | None:intergenic |
| AACTTACAGATTCGACAGTA+CGG | 0.510427 | 1.3:+12269624 | MS.gene91188:intron |
| ACCACCCAGATATGTATGTA+AGG | 0.512095 | 1.3:-12267854 | None:intergenic |
| AATCGTTGGTGCACCAAGCA+TGG | 0.515353 | 1.3:+12272169 | MS.gene91188:CDS |
| ACGCCTGCGGTGCCATAACC+AGG | 0.521569 | 1.3:-12267793 | None:intergenic |
| ATAATTTGGATCTCTCCATA+AGG | 0.522393 | 1.3:-12270193 | None:intergenic |
| GGTGCGTATGTAAATGCAAC+TGG | 0.523461 | 1.3:+12272654 | MS.gene91188:CDS |
| ATTCACATATGAGTCAGATC+AGG | 0.524093 | 1.3:+12270468 | MS.gene91188:CDS |
| TGGAACGAATGAGTGATTGA+TGG | 0.525094 | 1.3:-12270405 | None:intergenic |
| GGCACCGCAGGCGTCGTCCC+GGG | 0.527337 | 1.3:+12267802 | MS.gene91188:CDS |
| GTTGTTGTTGTTGTCATCAT+CGG | 0.537938 | 1.3:-12266594 | None:intergenic |
| GTTGACGTTCCTTACACCAT+TGG | 0.538392 | 1.3:+12268778 | MS.gene91188:CDS |
| AGTCCTGGTTATGGCACCGC+AGG | 0.541575 | 1.3:+12267790 | MS.gene91188:intron |
| AATTCAATGTAAAATCTGCC+AGG | 0.552499 | 1.3:+12272340 | MS.gene91188:CDS |
| GCAATTCTTCGAGATCGAGC+TGG | 0.553019 | 1.3:-12266538 | None:intergenic |
| AGGAGTTGTGCTCTTTCCTG+GGG | 0.553657 | 1.3:+12268690 | MS.gene91188:intron |
| GCTTTCGCTTAAGACGGTGT+TGG | 0.556837 | 1.3:+12269694 | MS.gene91188:CDS |
| AAACAATCCTCCATCAGAGA+AGG | 0.563310 | 1.3:+12270601 | MS.gene91188:CDS |
| TGTTTCTGAATCTACAAGGC+AGG | 0.563311 | 1.3:+12272247 | MS.gene91188:CDS |
| GCATCCTTACATACATATCT+GGG | 0.564717 | 1.3:+12267850 | MS.gene91188:CDS |
| ACTTACAGATTCGACAGTAC+GGG | 0.570721 | 1.3:+12269625 | MS.gene91188:intron |
| CAGTACGGGCGCCTAGAGGA+TGG | 0.572399 | 1.3:+12269639 | MS.gene91188:CDS |
| CAAATGGATTAGCTCTAACT+GGG | 0.573810 | 1.3:+12272709 | MS.gene91188:CDS |
| TGCAAAGCGGAGTGATATGC+TGG | 0.576040 | 1.3:+12272608 | MS.gene91188:CDS |
| CATTCAACGAACCATCCTCT+AGG | 0.576324 | 1.3:-12269650 | None:intergenic |
| AACACACTGGCACGGTTGCA+AGG | 0.577040 | 1.3:-12270283 | None:intergenic |
| ACATACCATCGCGAACTCCA+AGG | 0.577866 | 1.3:+12270224 | MS.gene91188:CDS |
| TCAGCGATACCGCAAATCGT+AGG | 0.579115 | 1.3:+12268923 | MS.gene91188:CDS |
| AAATTCTATGTGAGGAGTAG+GGG | 0.580319 | 1.3:-12270651 | None:intergenic |
| GGATCTCATATAGATTGCGT+AGG | 0.582958 | 1.3:+12272288 | MS.gene91188:CDS |
| ATGTCTAGTGAAGGCCCTGT+TGG | 0.586333 | 1.3:+12272633 | MS.gene91188:CDS |
| GTTCATGATCTGTAGATATG+TGG | 0.588117 | 1.3:+12272141 | MS.gene91188:intron |
| ACTCCTATTTGCTTGCACAA+AGG | 0.591007 | 1.3:+12270713 | MS.gene91188:CDS |
| CAAAATATAGTTGGTTTCCG+GGG | 0.591312 | 1.3:+12272742 | MS.gene91188:CDS |
| ATTAAGCCCTTCTCTGATGG+AGG | 0.592131 | 1.3:-12270608 | None:intergenic |
| TACCTGTTTCTGAATCTACA+AGG | 0.597932 | 1.3:+12272243 | MS.gene91188:CDS |
| CGGTGTTGGATCGATGTGGA+AGG | 0.598035 | 1.3:+12269708 | MS.gene91188:CDS |
| TTGGATTCAATAACTCTCAA+GGG | 0.598542 | 1.3:-12268721 | None:intergenic |
| TGAGATAACGACTTTGTACA+AGG | 0.599821 | 1.3:+12272686 | MS.gene91188:CDS |
| AACAATCCTCCATCAGAGAA+GGG | 0.602387 | 1.3:+12270602 | MS.gene91188:CDS |
| TGCTCTTGAAATTCTATGTG+AGG | 0.603043 | 1.3:-12270659 | None:intergenic |
| TCGTTGAATGTGGTCACTCG+TGG | 0.603436 | 1.3:+12269663 | MS.gene91188:CDS |
| TTCACCCGGGACGACGCCTG+CGG | 0.608625 | 1.3:-12267806 | None:intergenic |
| CTCAAGGGAAGAGTAGCCCC+AGG | 0.609607 | 1.3:-12268706 | None:intergenic |
| AGAGGATGGTTCGTTGAATG+TGG | 0.609930 | 1.3:+12269653 | MS.gene91188:CDS |
| CATACCATCGCGAACTCCAA+GGG | 0.610151 | 1.3:+12270225 | MS.gene91188:CDS |
| ATGTTGAAGACACACATCAC+AGG | 0.621960 | 1.3:+12267981 | MS.gene91188:CDS |
| TTGGATCGATGTGGAAGGAG+TGG | 0.625144 | 1.3:+12269713 | MS.gene91188:CDS |
| GATCTCATATAGATTGCGTA+GGG | 0.626453 | 1.3:+12272289 | MS.gene91188:CDS |
| GGATTTACCTACCACGCCAA+TGG | 0.626908 | 1.3:-12268794 | None:intergenic |
| AACATACGATATACCCAACC+AGG | 0.631908 | 1.3:-12270688 | None:intergenic |
| AACAACGCTTTCGCTTAAGA+CGG | 0.633073 | 1.3:+12269688 | MS.gene91188:CDS |
| GTATTGTAAGTGAATTCACC+CGG | 0.633782 | 1.3:-12267820 | None:intergenic |
| TGTCATCATCGGAAGAATCG+TGG | 0.635083 | 1.3:-12266583 | None:intergenic |
| GCATCCCTTGGAGTTCGCGA+TGG | 0.645866 | 1.3:-12270229 | None:intergenic |
| AAGCATTGGGACGACTGCAG+AGG | 0.649025 | 1.3:+12268957 | MS.gene91188:CDS |
| CATTTACATACGCACCAACA+GGG | 0.660144 | 1.3:-12272647 | None:intergenic |
| AAATGGGCAGACACTTACCC+CGG | 0.661600 | 1.3:-12272759 | None:intergenic |
| TTGAAGGCAACACACTGGCA+CGG | 0.664883 | 1.3:-12270291 | None:intergenic |
| ATACATTGAAGGCAACACAC+TGG | 0.666722 | 1.3:-12270296 | None:intergenic |
| TCGACAGTACGGGCGCCTAG+AGG | 0.677937 | 1.3:+12269635 | MS.gene91188:CDS |
| TGTAGATTATAATTGCAAAG+CGG | 0.679418 | 1.3:+12272595 | MS.gene91188:intron |
| CGTTCCTTACACCATTGGCG+TGG | 0.682501 | 1.3:+12268783 | MS.gene91188:CDS |
| AAGACGGTGTTGGATCGATG+TGG | 0.691734 | 1.3:+12269704 | MS.gene91188:CDS |
| ATGCTGGTGATGTCTAGTGA+AGG | 0.693369 | 1.3:+12272624 | MS.gene91188:CDS |
| TCCTTACATACATATCTGGG+TGG | 0.695814 | 1.3:+12267853 | MS.gene91188:CDS |
| TATGATGAATCAGCAAGTAG+TGG | 0.696041 | 1.3:+12270436 | MS.gene91188:CDS |
| GATATGTGGAAGCAAATCGT+TGG | 0.703389 | 1.3:+12272155 | MS.gene91188:intron |
| TATTGTAAGTGAATTCACCC+GGG | 0.729958 | 1.3:-12267819 | None:intergenic |
| TGGACAGGACTCCTTAAACG+AGG | 0.758674 | 1.3:+12270327 | MS.gene91188:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+GGG | - | chr1.3:12270046-12270027 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr1.3:12270047-12270028 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATGG+GGG | - | chr1.3:12270025-12270044 | None:intergenic | 10.0% |
| !! | TGATATGTTAAATATTTATA+TGG | + | chr1.3:12270785-12270804 | MS.gene91188:intron | 10.0% |
| !!! | CATTTTATATATGTATATAT+AGG | + | chr1.3:12269756-12269775 | MS.gene91188:intron | 10.0% |
| !!! | TGTTTTTCTAATATTTATAT+AGG | + | chr1.3:12272387-12272406 | MS.gene91188:intron | 10.0% |
| !!! | TTTTATATATGTATATATAG+GGG | + | chr1.3:12269758-12269777 | MS.gene91188:intron | 10.0% |
| !! | AAAAATTAGTCAAAAACATT+GGG | + | chr1.3:12268181-12268200 | MS.gene91188:intron | 15.0% |
| !! | AAATATATAGTTATGAATCA+GGG | - | chr1.3:12270991-12271010 | None:intergenic | 15.0% |
| !! | AAGAAAATTTATTTCAAAAG+AGG | + | chr1.3:12268308-12268327 | MS.gene91188:intron | 15.0% |
| !! | AATATAATATGATATCTTAC+AGG | - | chr1.3:12272486-12272505 | None:intergenic | 15.0% |
| !! | AATATTTAACATATCAAAAG+TGG | - | chr1.3:12270781-12270800 | None:intergenic | 15.0% |
| !! | ACATATAATTAGTATTAGTA+AGG | + | chr1.3:12271255-12271274 | MS.gene91188:intron | 15.0% |
| !! | ATAAAACTTCAAAAATGATA+TGG | - | chr1.3:12269171-12269190 | None:intergenic | 15.0% |
| !! | ATACTCAAATTAGAAAAATT+TGG | + | chr1.3:12271294-12271313 | MS.gene91188:intron | 15.0% |
| !! | ATTCATAACTATATATTTGT+TGG | + | chr1.3:12270993-12271012 | MS.gene91188:intron | 15.0% |
| !! | TAAAAATTAGTCAAAAACAT+TGG | + | chr1.3:12268180-12268199 | MS.gene91188:intron | 15.0% |
| !! | TATATTAACAAATAAGATGT+AGG | - | chr1.3:12269512-12269531 | None:intergenic | 15.0% |
| !! | TGTTTATAATAGAAAAACAT+GGG | - | chr1.3:12269860-12269879 | None:intergenic | 15.0% |
| !! | TTCATAACTATATATTTGTT+GGG | + | chr1.3:12270994-12271013 | MS.gene91188:intron | 15.0% |
| !! | TTGTTTATAATAGAAAAACA+TGG | - | chr1.3:12269861-12269880 | None:intergenic | 15.0% |
| !! | TTTATATATGTATATATAGG+GGG | + | chr1.3:12269759-12269778 | MS.gene91188:intron | 15.0% |
| !!! | AAATCAATAACAATCAATTT+TGG | - | chr1.3:12266847-12266866 | None:intergenic | 15.0% |
| !!! | GATATTTTGTAATATCTTAT+AGG | - | chr1.3:12272458-12272477 | None:intergenic | 15.0% |
| !!! | TATCTAATTTTTGGTTTATT+TGG | + | chr1.3:12271522-12271541 | MS.gene91188:intron | 15.0% |
| !!! | TTTGCATTTATAATCTATTT+TGG | - | chr1.3:12267225-12267244 | None:intergenic | 15.0% |
| !!! | TTTTTGGTTTATCTAATTTT+TGG | + | chr1.3:12271513-12271532 | MS.gene91188:intron | 15.0% |
| !! | AAAGTTTAATAGAGACAAAA+GGG | + | chr1.3:12269924-12269943 | MS.gene91188:intron | 20.0% |
| !! | AAATATTAGAAAAACACTTG+AGG | - | chr1.3:12272383-12272402 | None:intergenic | 20.0% |
| !! | AAGAAAATAAGAACAAAACA+TGG | - | chr1.3:12271654-12271673 | None:intergenic | 20.0% |
| !! | AATGTAAAATGGTTTATGTT+TGG | - | chr1.3:12267581-12267600 | None:intergenic | 20.0% |
| !! | ACAAATGCTTATTATTCTAA+AGG | - | chr1.3:12270957-12270976 | None:intergenic | 20.0% |
| !! | AGAAAATAAGAACAAAACAT+GGG | - | chr1.3:12271653-12271672 | None:intergenic | 20.0% |
| !! | ATAGAAAATGATAAAACATC+AGG | - | chr1.3:12272212-12272231 | None:intergenic | 20.0% |
| !! | ATATACTACCTAAAAGAAAT+AGG | - | chr1.3:12268400-12268419 | None:intergenic | 20.0% |
| !! | ATTCAATGATATTATAAGCA+AGG | - | chr1.3:12268355-12268374 | None:intergenic | 20.0% |
| !! | CAAATAATGAAAACTCAAAT+TGG | - | chr1.3:12267723-12267742 | None:intergenic | 20.0% |
| !! | CAAATATATAGTTATGAATC+AGG | - | chr1.3:12270992-12271011 | None:intergenic | 20.0% |
| !! | CAAGTTATAATCAATTCTAT+AGG | - | chr1.3:12267260-12267279 | None:intergenic | 20.0% |
| !! | CTTTACATTCAATTCTTATT+TGG | + | chr1.3:12267373-12267392 | MS.gene91188:intron | 20.0% |
| !! | GTAAATTGATCTTGTAAAAT+TGG | - | chr1.3:12267100-12267119 | None:intergenic | 20.0% |
| !! | TAAAGTTTAATAGAGACAAA+AGG | + | chr1.3:12269923-12269942 | MS.gene91188:intron | 20.0% |
| !! | TAAGTAGACATAATATTAGA+GGG | + | chr1.3:12271897-12271916 | MS.gene91188:intron | 20.0% |
| !! | TACAGTCCAAAAAATTAAAT+AGG | - | chr1.3:12268509-12268528 | None:intergenic | 20.0% |
| !! | TATTATAAGCAAGGAAAAAA+TGG | - | chr1.3:12268346-12268365 | None:intergenic | 20.0% |
| !! | TCAATTCAATTACAAGAATT+TGG | + | chr1.3:12267621-12267640 | MS.gene91188:intron | 20.0% |
| !! | TCCCTAAAAATTAGATAAAT+CGG | - | chr1.3:12271463-12271482 | None:intergenic | 20.0% |
| !! | TTAAGTAGACATAATATTAG+AGG | + | chr1.3:12271896-12271915 | MS.gene91188:intron | 20.0% |
| !! | TTGAAAAATAATTCTTCATC+AGG | - | chr1.3:12268288-12268307 | None:intergenic | 20.0% |
| !!! | AATGTAAAGTGATTTAAGTT+TGG | - | chr1.3:12267362-12267381 | None:intergenic | 20.0% |
| !!! | AATTAAGAGCATTTATCATA+AGG | - | chr1.3:12268818-12268837 | None:intergenic | 20.0% |
| !!! | ATTTATCTAATTTTTAGGGA+TGG | + | chr1.3:12271463-12271482 | MS.gene91188:intron | 20.0% |
| !!! | ATTTTTTAGGTGAAAAACTA+AGG | + | chr1.3:12272028-12272047 | MS.gene91188:intron | 20.0% |
| !!! | CTTTTGCCTATTTAATTTTT+TGG | + | chr1.3:12268500-12268519 | MS.gene91188:intron | 20.0% |
| !!! | GTTTTCATTATTTGTTGTTT+TGG | + | chr1.3:12267729-12267748 | MS.gene91188:intron | 20.0% |
| !!! | TAATTTTTGGTTTATTTGGT+GGG | + | chr1.3:12271526-12271545 | MS.gene91188:intron | 20.0% |
| !!! | TAGATAAACTGGTTAATTTT+TGG | + | chr1.3:12271497-12271516 | MS.gene91188:intron | 20.0% |
| !!! | TCAAGTTTTGTTTTTTTTGA+GGG | - | chr1.3:12267289-12267308 | None:intergenic | 20.0% |
| !!! | TCCGATTTATCTAATTTTTA+GGG | + | chr1.3:12271459-12271478 | MS.gene91188:intron | 20.0% |
| !!! | TTATTCTAAAGGAAAGAAAA+AGG | - | chr1.3:12270946-12270965 | None:intergenic | 20.0% |
| !!! | TTCAAGTTTTGTTTTTTTTG+AGG | - | chr1.3:12267290-12267309 | None:intergenic | 20.0% |
| !!! | TTCCGATTTATCTAATTTTT+AGG | + | chr1.3:12271458-12271477 | MS.gene91188:intron | 20.0% |
| !!! | TTTATCTAATTTTTAGGGAT+GGG | + | chr1.3:12271464-12271483 | MS.gene91188:intron | 20.0% |
| ! | AAAATAAGAACAAAACATGG+GGG | - | chr1.3:12271651-12271670 | None:intergenic | 25.0% |
| ! | AACATGAGTTCAATGTAAAA+TGG | - | chr1.3:12267592-12267611 | None:intergenic | 25.0% |
| ! | AACCAAAGACTTTATATTTC+AGG | - | chr1.3:12269348-12269367 | None:intergenic | 25.0% |
| ! | AACCTGAAATATAAAGTCTT+TGG | + | chr1.3:12269343-12269362 | MS.gene91188:intron | 25.0% |
| ! | AATTTGAGCGTAAAAATCAT+TGG | - | chr1.3:12267543-12267562 | None:intergenic | 25.0% |
| ! | ACTTAATATGACAATCTTTG+TGG | - | chr1.3:12271863-12271882 | None:intergenic | 25.0% |
| ! | ATAAAAATAGAAGTTCTACG+AGG | - | chr1.3:12268603-12268622 | None:intergenic | 25.0% |
| ! | ATACCTTCAAGACAAAAAAT+CGG | - | chr1.3:12268043-12268062 | None:intergenic | 25.0% |
| ! | ATGGTCATTTGTACAATTTA+TGG | + | chr1.3:12267906-12267925 | MS.gene91188:intron | 25.0% |
| ! | CAAAAGAAATAATAAGACGT+GGG | - | chr1.3:12269481-12269500 | None:intergenic | 25.0% |
| ! | CTTAATATGACAATCTTTGT+GGG | - | chr1.3:12271862-12271881 | None:intergenic | 25.0% |
| ! | GAAAATAAGAACAAAACATG+GGG | - | chr1.3:12271652-12271671 | None:intergenic | 25.0% |
| ! | TGATTCATCATATTCAAAAC+TGG | - | chr1.3:12270428-12270447 | None:intergenic | 25.0% |
| ! | TGTAGATTATAATTGCAAAG+CGG | + | chr1.3:12272595-12272614 | MS.gene91188:intron | 25.0% |
| ! | TTAACTTATTGGAAGAAACA+TGG | + | chr1.3:12268648-12268667 | MS.gene91188:intron | 25.0% |
| ! | TTGAGTATATATATTGAACC+TGG | - | chr1.3:12271282-12271301 | None:intergenic | 25.0% |
| !! | AAAACTCAAATTGGTCTAAT+GGG | - | chr1.3:12267714-12267733 | None:intergenic | 25.0% |
| !! | AAAGACTTTATATTTCAGGT+TGG | - | chr1.3:12269344-12269363 | None:intergenic | 25.0% |
| !! | AGTTATTGAATCCAATTTTG+TGG | + | chr1.3:12268729-12268748 | MS.gene91188:CDS | 25.0% |
| !! | CAGATATTTGAATTCACTTT+TGG | - | chr1.3:12266771-12266790 | None:intergenic | 25.0% |
| !! | CTCATTTTCTTTCTTTTGTT+GGG | + | chr1.3:12270159-12270178 | MS.gene91188:intron | 25.0% |
| !! | GTATGTTTTCCTCAATAATT+TGG | - | chr1.3:12270210-12270229 | None:intergenic | 25.0% |
| !! | TACAAAATATAGTTGGTTTC+CGG | + | chr1.3:12272740-12272759 | MS.gene91188:CDS | 25.0% |
| !! | TCTCATTTTCTTTCTTTTGT+TGG | + | chr1.3:12270158-12270177 | MS.gene91188:intron | 25.0% |
| !!! | AAAATCTGGATTCTAGAATA+GGG | + | chr1.3:12270560-12270579 | MS.gene91188:CDS | 25.0% |
| !!! | AAACACTTTTTTTACAGGAA+GGG | + | chr1.3:12268204-12268223 | MS.gene91188:intron | 25.0% |
| !!! | AACATGTCACTTTATATTTC+AGG | - | chr1.3:12269309-12269328 | None:intergenic | 25.0% |
| !!! | AAGTCAAATTATCTGGTTTT+TGG | + | chr1.3:12267652-12267671 | MS.gene91188:intron | 25.0% |
| !!! | ACTAAGTCTTGTTTTTATAG+AGG | + | chr1.3:12270839-12270858 | MS.gene91188:intron | 25.0% |
| !!! | AGTCAAATTATCTGGTTTTT+GGG | + | chr1.3:12267653-12267672 | MS.gene91188:intron | 25.0% |
| !!! | AGTGTTTTGGTACAATAAAT+GGG | + | chr1.3:12271036-12271055 | MS.gene91188:intron | 25.0% |
| !!! | ATTTGTTTCTATGTTCGAAT+GGG | + | chr1.3:12268428-12268447 | MS.gene91188:intron | 25.0% |
| !!! | CAAGTTTTGTTTTTTTTGAG+GGG | - | chr1.3:12267288-12267307 | None:intergenic | 25.0% |
| !!! | CACGTCTTATTATTTCTTTT+GGG | + | chr1.3:12269480-12269499 | MS.gene91188:intron | 25.0% |
| !!! | CTAATTTTTGGTTTATTTGG+TGG | + | chr1.3:12271525-12271544 | MS.gene91188:intron | 25.0% |
| !!! | GGTTTTTTCAGAAATAGATT+TGG | + | chr1.3:12271575-12271594 | MS.gene91188:intron | 25.0% |
| !!! | GTTATTGATTTTGACATGTT+TGG | + | chr1.3:12266856-12266875 | MS.gene91188:intron | 25.0% |
| !!! | TAGTGTTTTGGTACAATAAA+TGG | + | chr1.3:12271035-12271054 | MS.gene91188:intron | 25.0% |
| !!! | TATTGATTTTAGTGCATGTT+TGG | + | chr1.3:12266804-12266823 | MS.gene91188:intron | 25.0% |
| !!! | TGTTTTAGTAAAGTACAAGT+AGG | + | chr1.3:12269947-12269966 | MS.gene91188:intron | 25.0% |
| !!! | TGTTTTGGTAAATAACTAGT+AGG | - | chr1.3:12269837-12269856 | None:intergenic | 25.0% |
| AAAAACAACAAGAGACTCTA+TGG | - | chr1.3:12268849-12268868 | None:intergenic | 30.0% | |
| AAATAAGAACAAAACATGGG+GGG | - | chr1.3:12271650-12271669 | None:intergenic | 30.0% | |
| AAGGGAAACATATAAGCATT+TGG | + | chr1.3:12268222-12268241 | MS.gene91188:intron | 30.0% | |
| AAGGTCACAAATTCAATTCA+TGG | + | chr1.3:12271096-12271115 | MS.gene91188:intron | 30.0% | |
| AATTAGCATTCCATAGAGAT+TGG | + | chr1.3:12269126-12269145 | MS.gene91188:intron | 30.0% | |
| AATTAGTATTAGTAAGGTCC+AGG | + | chr1.3:12271261-12271280 | MS.gene91188:intron | 30.0% | |
| AATTCAATGTAAAATCTGCC+AGG | + | chr1.3:12272340-12272359 | MS.gene91188:CDS | 30.0% | |
| ACATGATCGTATACTCAAAT+AGG | - | chr1.3:12271730-12271749 | None:intergenic | 30.0% | |
| ATAATTTGGATCTCTCCATA+AGG | - | chr1.3:12270196-12270215 | None:intergenic | 30.0% | |
| ATAGGATATTCTAGCGTAAT+AGG | + | chr1.3:12272405-12272424 | MS.gene91188:intron | 30.0% | |
| ATCAAAATCAATTCCAACCT+AGG | - | chr1.3:12267478-12267497 | None:intergenic | 30.0% | |
| ATTGGATTCAATAACTCTCA+AGG | - | chr1.3:12268725-12268744 | None:intergenic | 30.0% | |
| CAGCACTTACAAAATATAGT+TGG | + | chr1.3:12272733-12272752 | MS.gene91188:CDS | 30.0% | |
| CCAAAAGAAATAATAAGACG+TGG | - | chr1.3:12269482-12269501 | None:intergenic | 30.0% | |
| CTAATGTAGTAGTGAACAAT+AGG | - | chr1.3:12271321-12271340 | None:intergenic | 30.0% | |
| GATAGAAACGAATTGAAAGA+GGG | - | chr1.3:12266651-12266670 | None:intergenic | 30.0% | |
| GCAATAGAAGTCAAATTATC+TGG | + | chr1.3:12267645-12267664 | MS.gene91188:intron | 30.0% | |
| GCGAATGTGACAATTATTAT+GGG | + | chr1.3:12271994-12272013 | MS.gene91188:intron | 30.0% | |
| GTCATTTGTACAATTTATGG+TGG | + | chr1.3:12267909-12267928 | MS.gene91188:intron | 30.0% | |
| TAATACAATAGTCCTGGTTA+TGG | + | chr1.3:12267781-12267800 | MS.gene91188:intron | 30.0% | |
| TCGAACATAGAAACAAATCA+GGG | - | chr1.3:12268426-12268445 | None:intergenic | 30.0% | |
| TGAAAAAGATGCAGAAAATC+TGG | + | chr1.3:12270546-12270565 | MS.gene91188:CDS | 30.0% | |
| TGAAAGAGGGAAAATTACAT+AGG | - | chr1.3:12266638-12266657 | None:intergenic | 30.0% | |
| TGATAGAAACGAATTGAAAG+AGG | - | chr1.3:12266652-12266671 | None:intergenic | 30.0% | |
| TGCGAATGTGACAATTATTA+TGG | + | chr1.3:12271993-12272012 | MS.gene91188:intron | 30.0% | |
| TGTTTGTAATACAATAGTCC+TGG | + | chr1.3:12267775-12267794 | MS.gene91188:intron | 30.0% | |
| TTAATAGCACAATGATTGAG+AGG | - | chr1.3:12268988-12269007 | None:intergenic | 30.0% | |
| TTAGAAAAACACTTGAGGAT+TGG | - | chr1.3:12272378-12272397 | None:intergenic | 30.0% | |
| TTATTTCAAAAGAGGCTTCA+TGG | + | chr1.3:12268316-12268335 | MS.gene91188:intron | 30.0% | |
| TTCAAGACAAAAAATCGGAA+GGG | - | chr1.3:12268038-12268057 | None:intergenic | 30.0% | |
| TTCGAACATAGAAACAAATC+AGG | - | chr1.3:12268427-12268446 | None:intergenic | 30.0% | |
| TTGCAAGGAAGATTACTTAA+GGG | - | chr1.3:12270271-12270290 | None:intergenic | 30.0% | |
| TTGGATTCAATAACTCTCAA+GGG | - | chr1.3:12268724-12268743 | None:intergenic | 30.0% | |
| TTTGAGTATACGATCATGTA+TGG | + | chr1.3:12271731-12271750 | MS.gene91188:intron | 30.0% | |
| ! | ACAAAATATAGTTGGTTTCC+GGG | + | chr1.3:12272741-12272760 | MS.gene91188:CDS | 30.0% |
| ! | ACTAAAAGTGACACTCTTTT+TGG | + | chr1.3:12271957-12271976 | MS.gene91188:intron | 30.0% |
| ! | AGATTTGGTATTCCTTTCTT+CGG | + | chr1.3:12271590-12271609 | MS.gene91188:intron | 30.0% |
| ! | AGGTTTTGCAGAATTATATG+TGG | - | chr1.3:12269425-12269444 | None:intergenic | 30.0% |
| ! | ATAGAAAAACATGGGTGTTT+TGG | - | chr1.3:12269852-12269871 | None:intergenic | 30.0% |
| ! | CAACTATATTTTGTAAGTGC+TGG | - | chr1.3:12272735-12272754 | None:intergenic | 30.0% |
| ! | CTAAAAGTGACACTCTTTTT+GGG | + | chr1.3:12271958-12271977 | MS.gene91188:intron | 30.0% |
| ! | CTGATTTTCATATTCAGCAT+TGG | + | chr1.3:12269537-12269556 | MS.gene91188:intron | 30.0% |
| ! | GAAAACTCAAATTGGTCTAA+TGG | - | chr1.3:12267715-12267734 | None:intergenic | 30.0% |
| ! | GCTGTCAATTTCATTTTAAG+AGG | - | chr1.3:12268114-12268133 | None:intergenic | 30.0% |
| ! | TCTTCACATGCATTTTATGT+TGG | + | chr1.3:12270115-12270134 | MS.gene91188:intron | 30.0% |
| ! | TGGGATCTTATTCCAAATTT+TGG | + | chr1.3:12271545-12271564 | MS.gene91188:intron | 30.0% |
| ! | TGTAGATAATTTTGTGGTTG+TGG | + | chr1.3:12271698-12271717 | MS.gene91188:intron | 30.0% |
| ! | TTCAGAAACAGGTATTTTAC+TGG | - | chr1.3:12272237-12272256 | None:intergenic | 30.0% |
| !! | ATATTTCAGGTTGGATGTAA+AGG | - | chr1.3:12269296-12269315 | None:intergenic | 30.0% |
| !! | ATTTTCATATTCAGCATTGG+TGG | + | chr1.3:12269540-12269559 | MS.gene91188:intron | 30.0% |
| !! | CCACGTCTTATTATTTCTTT+TGG | + | chr1.3:12269479-12269498 | MS.gene91188:intron | 30.0% |
| !! | CTTAATCTAGCTTAGTGTTT+TGG | + | chr1.3:12271023-12271042 | MS.gene91188:intron | 30.0% |
| !! | GAAAATCTGGATTCTAGAAT+AGG | + | chr1.3:12270559-12270578 | MS.gene91188:CDS | 30.0% |
| !! | GATTTGTTTCTATGTTCGAA+TGG | + | chr1.3:12268427-12268446 | MS.gene91188:intron | 30.0% |
| !! | GATTTTCTGCATCTTTTTCA+TGG | - | chr1.3:12270546-12270565 | None:intergenic | 30.0% |
| !! | TATTTCAGGTTGGATGTAAA+AGG | - | chr1.3:12269295-12269314 | None:intergenic | 30.0% |
| !! | TATTTCAGGTTGGATGTAAA+GGG | - | chr1.3:12269295-12269314 | None:intergenic | 30.0% |
| !! | TGTCACTTTATATTTCAGGT+TGG | - | chr1.3:12269305-12269324 | None:intergenic | 30.0% |
| !!! | ACATATAAGCATTTGGCTTT+TGG | + | chr1.3:12268229-12268248 | MS.gene91188:intron | 30.0% |
| !!! | ATATAAGCATTTGGCTTTTG+GGG | + | chr1.3:12268231-12268250 | MS.gene91188:intron | 30.0% |
| !!! | ATTCCAAATTTTGGTTCTGA+GGG | + | chr1.3:12271554-12271573 | MS.gene91188:intron | 30.0% |
| !!! | CATATAAGCATTTGGCTTTT+GGG | + | chr1.3:12268230-12268249 | MS.gene91188:intron | 30.0% |
| !!! | GAAACACTTTTTTTACAGGA+AGG | + | chr1.3:12268203-12268222 | MS.gene91188:intron | 30.0% |
| !!! | TATTCCAAATTTTGGTTCTG+AGG | + | chr1.3:12271553-12271572 | MS.gene91188:intron | 30.0% |
| !!! | TTGGGAAACACTTTTTTTAC+AGG | + | chr1.3:12268199-12268218 | MS.gene91188:intron | 30.0% |
| !!! | TTTTCATATTCAGCATTGGT+GGG | + | chr1.3:12269541-12269560 | MS.gene91188:intron | 30.0% |
| !!! | TTTTTGTATGTTTGGTTCTG+CGG | - | chr1.3:12267447-12267466 | None:intergenic | 30.0% |
| AAACCCTCAGAACCAAAATT+TGG | - | chr1.3:12271560-12271579 | None:intergenic | 35.0% | |
| AAATTCTATGTGAGGAGTAG+GGG | - | chr1.3:12270654-12270673 | None:intergenic | 35.0% | |
| AACTTACAGATTCGACAGTA+CGG | + | chr1.3:12269624-12269643 | MS.gene91188:intron | 35.0% | |
| AATAAGAACAAAACATGGGG+GGG | - | chr1.3:12271649-12271668 | None:intergenic | 35.0% | |
| AATGTGGTGCAGAATGAAAA+AGG | - | chr1.3:12268472-12268491 | None:intergenic | 35.0% | |
| AGCATCCTTACATACATATC+TGG | + | chr1.3:12267849-12267868 | MS.gene91188:CDS | 35.0% | |
| AGTTGAAGGTAAAGTGAGTT+AGG | - | chr1.3:12267062-12267081 | None:intergenic | 35.0% | |
| ATATTACCTCGAAAAGTCGT+TGG | + | chr1.3:12269037-12269056 | MS.gene91188:intron | 35.0% | |
| ATCCTTCATGGATTTGAGTA+TGG | + | chr1.3:12268070-12268089 | MS.gene91188:intron | 35.0% | |
| ATGCAAAAGCTACTGTTCTT+AGG | - | chr1.3:12267520-12267539 | None:intergenic | 35.0% | |
| ATTCACATATGAGTCAGATC+AGG | + | chr1.3:12270468-12270487 | MS.gene91188:CDS | 35.0% | |
| CCAATCTGTTGCAAATGATA+TGG | + | chr1.3:12271121-12271140 | MS.gene91188:intron | 35.0% | |
| CCATATCATTTGCAACAGAT+TGG | - | chr1.3:12271124-12271143 | None:intergenic | 35.0% | |
| CCATCAACAGAATACATTGA+AGG | - | chr1.3:12270310-12270329 | None:intergenic | 35.0% | |
| CCTTCAATGTATTCTGTTGA+TGG | + | chr1.3:12270307-12270326 | MS.gene91188:CDS | 35.0% | |
| CGAACATAGAAACAAATCAG+GGG | - | chr1.3:12268425-12268444 | None:intergenic | 35.0% | |
| CTTCAAGACAAAAAATCGGA+AGG | - | chr1.3:12268039-12268058 | None:intergenic | 35.0% | |
| GAAATTCTATGTGAGGAGTA+GGG | - | chr1.3:12270655-12270674 | None:intergenic | 35.0% | |
| GAACACTTGTGTAGATAAAC+TGG | + | chr1.3:12271486-12271505 | MS.gene91188:intron | 35.0% | |
| GAACCAAACATACAAAAAGG+TGG | + | chr1.3:12267449-12267468 | MS.gene91188:intron | 35.0% | |
| GACTAATCCTTGCAATATTC+AGG | + | chr1.3:12268670-12268689 | MS.gene91188:intron | 35.0% | |
| GACTTGAAGCTAGAAATTTG+TGG | + | chr1.3:12266917-12266936 | MS.gene91188:intron | 35.0% | |
| GATCGTATACTCAAATAGGT+TGG | - | chr1.3:12271726-12271745 | None:intergenic | 35.0% | |
| GATCTCATATAGATTGCGTA+GGG | + | chr1.3:12272289-12272308 | MS.gene91188:CDS | 35.0% | |
| GCAGAACCAAACATACAAAA+AGG | + | chr1.3:12267446-12267465 | MS.gene91188:intron | 35.0% | |
| GCATCCTTACATACATATCT+GGG | + | chr1.3:12267850-12267869 | MS.gene91188:CDS | 35.0% | |
| GCATGCAAGTGTTAACTTAT+TGG | + | chr1.3:12268637-12268656 | MS.gene91188:intron | 35.0% | |
| GTATTGTAAGTGAATTCACC+CGG | - | chr1.3:12267823-12267842 | None:intergenic | 35.0% | |
| GTTCATGATCTGTAGATATG+TGG | + | chr1.3:12272141-12272160 | MS.gene91188:intron | 35.0% | |
| GTTGCAAGGAAGATTACTTA+AGG | - | chr1.3:12270272-12270291 | None:intergenic | 35.0% | |
| GTTGCCTTTCTTTAAACTCT+GGG | - | chr1.3:12271429-12271448 | None:intergenic | 35.0% | |
| TACCTAAAAGAAATAGGCCT+GGG | - | chr1.3:12268394-12268413 | None:intergenic | 35.0% | |
| TATGATGAATCAGCAAGTAG+TGG | + | chr1.3:12270436-12270455 | MS.gene91188:CDS | 35.0% | |
| TATGTGACATGATCCTTCAA+GGG | + | chr1.3:12271770-12271789 | MS.gene91188:intron | 35.0% | |
| TATTGTAAGTGAATTCACCC+GGG | - | chr1.3:12267822-12267841 | None:intergenic | 35.0% | |
| TCACCTAAAAAATACTCCCT+CGG | - | chr1.3:12272021-12272040 | None:intergenic | 35.0% | |
| TCTCGCTAAAAGTTAGTTGA+AGG | - | chr1.3:12267076-12267095 | None:intergenic | 35.0% | |
| TCTTCATCAGGCAACTAATA+TGG | - | chr1.3:12268276-12268295 | None:intergenic | 35.0% | |
| TGAAATTCTATGTGAGGAGT+AGG | - | chr1.3:12270656-12270675 | None:intergenic | 35.0% | |
| TGAGATAACGACTTTGTACA+AGG | + | chr1.3:12272686-12272705 | MS.gene91188:CDS | 35.0% | |
| TGCTCTTGAAATTCTATGTG+AGG | - | chr1.3:12270662-12270681 | None:intergenic | 35.0% | |
| TGGAGAGATCCAAATTATTG+AGG | + | chr1.3:12270198-12270217 | MS.gene91188:CDS | 35.0% | |
| TGTTTCACTTTCCTCGTTTA+AGG | - | chr1.3:12270341-12270360 | None:intergenic | 35.0% | |
| TTATGTGACATGATCCTTCA+AGG | + | chr1.3:12271769-12271788 | MS.gene91188:intron | 35.0% | |
| TTGTTGTACTTCGTCGTTTA+TGG | + | chr1.3:12267887-12267906 | MS.gene91188:intron | 35.0% | |
| TTTCCAACTTTCATCAAGTG+CGG | + | chr1.3:12272538-12272557 | MS.gene91188:intron | 35.0% | |
| ! | AAAAGTCGTTGGTGTTTGTT+AGG | + | chr1.3:12269048-12269067 | MS.gene91188:intron | 35.0% |
| ! | AAGCTCTGATCAGAAAACTA+TGG | - | chr1.3:12270893-12270912 | None:intergenic | 35.0% |
| ! | AATGTATTCTGTTGATGGAC+AGG | + | chr1.3:12270312-12270331 | MS.gene91188:CDS | 35.0% |
| ! | ACTCCACCTTTTTGTATGTT+TGG | - | chr1.3:12267455-12267474 | None:intergenic | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | chr1.3:12269982-12270001 | MS.gene91188:intron | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr1.3:12270001-12269982 | None:intergenic | 35.0% |
| ! | AGTTTTCATCCTACGATTTG+CGG | - | chr1.3:12268935-12268954 | None:intergenic | 35.0% |
| ! | ATTGTCCCAAAGCACTAAAA+AGG | - | chr1.3:12271233-12271252 | None:intergenic | 35.0% |
| ! | CAAAATATAGTTGGTTTCCG+GGG | + | chr1.3:12272742-12272761 | MS.gene91188:CDS | 35.0% |
| ! | GATTTGGTATTCCTTTCTTC+GGG | + | chr1.3:12271591-12271610 | MS.gene91188:intron | 35.0% |
| ! | GCGTGTTGTAGATAATTTTG+TGG | + | chr1.3:12271692-12271711 | MS.gene91188:intron | 35.0% |
| ! | GTTGTTGTTGTTGTCATCAT+CGG | - | chr1.3:12266597-12266616 | None:intergenic | 35.0% |
| ! | TGTATGTTTGCTTCCACTTT+TGG | + | chr1.3:12267194-12267213 | MS.gene91188:intron | 35.0% |
| ! | TTGTCCCAAAGCACTAAAAA+GGG | - | chr1.3:12271232-12271251 | None:intergenic | 35.0% |
| !! | AATTTATGGTGGTTTCTAGC+TGG | + | chr1.3:12267920-12267939 | MS.gene91188:intron | 35.0% |
| !! | ATTGCCCTTTTTAGTGCTTT+GGG | + | chr1.3:12271225-12271244 | MS.gene91188:intron | 35.0% |
| !! | ATTGTGATGGATATAGAGAG+AGG | - | chr1.3:12271402-12271421 | None:intergenic | 35.0% |
| !! | CAAATGGATTAGCTCTAACT+GGG | + | chr1.3:12272709-12272728 | MS.gene91188:CDS | 35.0% |
| !! | TACCTGTTTCTGAATCTACA+AGG | + | chr1.3:12272243-12272262 | MS.gene91188:CDS | 35.0% |
| !! | TTTCATATTCAGCATTGGTG+GGG | + | chr1.3:12269542-12269561 | MS.gene91188:intron | 35.0% |
| !!! | AATTTTCCAAAAGCATCCCT+TGG | - | chr1.3:12270244-12270263 | None:intergenic | 35.0% |
| !!! | CTTCCGATTTTTTGTCTTGA+AGG | + | chr1.3:12268037-12268056 | MS.gene91188:CDS | 35.0% |
| !!! | TATTTTGGCTTCTCCAAAAG+TGG | - | chr1.3:12267210-12267229 | None:intergenic | 35.0% |
| !!! | TTTTTTGTTTGCTTTTCCCC+AGG | + | chr1.3:12268374-12268393 | MS.gene91188:intron | 35.0% |
| AAACAATCCTCCATCAGAGA+AGG | + | chr1.3:12270601-12270620 | MS.gene91188:CDS | 40.0% | |
| AACAACGCTTTCGCTTAAGA+CGG | + | chr1.3:12269688-12269707 | MS.gene91188:CDS | 40.0% | |
| AACAATCCTCCATCAGAGAA+GGG | + | chr1.3:12270602-12270621 | MS.gene91188:CDS | 40.0% | |
| AACATACGATATACCCAACC+AGG | - | chr1.3:12270691-12270710 | None:intergenic | 40.0% | |
| AACTGCATGTCTGTTAAAGC+AGG | - | chr1.3:12268161-12268180 | None:intergenic | 40.0% | |
| AACTGTCTAAACCCGAAGAA+AGG | - | chr1.3:12271605-12271624 | None:intergenic | 40.0% | |
| AAGCACTAAAAAGGGCAATC+TGG | - | chr1.3:12271224-12271243 | None:intergenic | 40.0% | |
| ACCACCCAGATATGTATGTA+AGG | - | chr1.3:12267857-12267876 | None:intergenic | 40.0% | |
| ACCTAAAAGAAATAGGCCTG+GGG | - | chr1.3:12268393-12268412 | None:intergenic | 40.0% | |
| ACGACTTTGTACAAGGCAAA+TGG | + | chr1.3:12272693-12272712 | MS.gene91188:CDS | 40.0% | |
| ACTCCTATTTGCTTGCACAA+AGG | + | chr1.3:12270713-12270732 | MS.gene91188:CDS | 40.0% | |
| ACTTACAGATTCGACAGTAC+GGG | + | chr1.3:12269625-12269644 | MS.gene91188:intron | 40.0% | |
| AGCACCCAGAGTTTAAAGAA+AGG | + | chr1.3:12271422-12271441 | MS.gene91188:intron | 40.0% | |
| AGGATGAAAACTGCAAGCAT+TGG | + | chr1.3:12268943-12268962 | MS.gene91188:CDS | 40.0% | |
| ATACAAAAAGGTGGAGTCCT+AGG | + | chr1.3:12267458-12267477 | MS.gene91188:intron | 40.0% | |
| ATACATTGAAGGCAACACAC+TGG | - | chr1.3:12270299-12270318 | None:intergenic | 40.0% | |
| ATGTGACATGATCCTTCAAG+GGG | + | chr1.3:12271771-12271790 | MS.gene91188:intron | 40.0% | |
| ATGTTGAAGACACACATCAC+AGG | + | chr1.3:12267981-12268000 | MS.gene91188:CDS | 40.0% | |
| CACAACTCCTGAATATTGCA+AGG | - | chr1.3:12268680-12268699 | None:intergenic | 40.0% | |
| CACCATACTCAAATCCATGA+AGG | - | chr1.3:12268075-12268094 | None:intergenic | 40.0% | |
| CATAGAGATTGGCATGACTA+TGG | + | chr1.3:12269137-12269156 | MS.gene91188:intron | 40.0% | |
| CATAGTCATGCCAATCTCTA+TGG | - | chr1.3:12269139-12269158 | None:intergenic | 40.0% | |
| CATTTACATACGCACCAACA+GGG | - | chr1.3:12272650-12272669 | None:intergenic | 40.0% | |
| CTACCTAAAAGAAATAGGCC+TGG | - | chr1.3:12268395-12268414 | None:intergenic | 40.0% | |
| CTAGCTTCAAGTCATACTCT+TGG | - | chr1.3:12266910-12266929 | None:intergenic | 40.0% | |
| CTCCTATTTGCTTGCACAAA+GGG | + | chr1.3:12270714-12270733 | MS.gene91188:CDS | 40.0% | |
| CTGTTGCAAATGATATGGCT+TGG | + | chr1.3:12271126-12271145 | MS.gene91188:intron | 40.0% | |
| CTTGCATGCATAACATGATG+AGG | - | chr1.3:12268626-12268645 | None:intergenic | 40.0% | |
| GACAATTATTATGGGTCCGA+GGG | + | chr1.3:12272002-12272021 | MS.gene91188:intron | 40.0% | |
| GATATGTGGAAGCAAATCGT+TGG | + | chr1.3:12272155-12272174 | MS.gene91188:intron | 40.0% | |
| GGATCTCATATAGATTGCGT+AGG | + | chr1.3:12272288-12272307 | MS.gene91188:CDS | 40.0% | |
| GGATGAAAACTGCAAGCATT+GGG | + | chr1.3:12268944-12268963 | MS.gene91188:CDS | 40.0% | |
| GGTTGCCTTTCTTTAAACTC+TGG | - | chr1.3:12271430-12271449 | None:intergenic | 40.0% | |
| TAGATAAATCGGAATGCGCT+CGG | - | chr1.3:12271452-12271471 | None:intergenic | 40.0% | |
| TCATTCTGCACCACATTCTT+GGG | + | chr1.3:12268475-12268494 | MS.gene91188:intron | 40.0% | |
| TCCTTACATACATATCTGGG+TGG | + | chr1.3:12267853-12267872 | MS.gene91188:CDS | 40.0% | |
| TGACAATTATTATGGGTCCG+AGG | + | chr1.3:12272001-12272020 | MS.gene91188:intron | 40.0% | |
| TGCCTTGTAGATTCAGAAAC+AGG | - | chr1.3:12272248-12272267 | None:intergenic | 40.0% | |
| TGGAACGAATGAGTGATTGA+TGG | - | chr1.3:12270408-12270427 | None:intergenic | 40.0% | |
| TGGATTTGAGTATGGTGCTT+TGG | + | chr1.3:12268078-12268097 | MS.gene91188:intron | 40.0% | |
| TTCATTCTGCACCACATTCT+TGG | + | chr1.3:12268474-12268493 | MS.gene91188:intron | 40.0% | |
| TTCCAACTTTCATCAAGTGC+GGG | + | chr1.3:12272539-12272558 | MS.gene91188:intron | 40.0% | |
| TTTCAAAAGAGGCTTCATGG+TGG | + | chr1.3:12268319-12268338 | MS.gene91188:intron | 40.0% | |
| ! | ACATCACAGGTCAACGTTTT+TGG | + | chr1.3:12267994-12268013 | MS.gene91188:CDS | 40.0% |
| ! | TGTTTCTGAATCTACAAGGC+AGG | + | chr1.3:12272247-12272266 | MS.gene91188:CDS | 40.0% |
| ! | TTTTCATGGTCAGGTAGCAA+TGG | - | chr1.3:12270532-12270551 | None:intergenic | 40.0% |
| !! | AGGAGCTTTTGGAGATTGAT+GGG | + | chr1.3:12272267-12272286 | MS.gene91188:CDS | 40.0% |
| !! | ATTTCAAGAGCATTCTTGCC+TGG | + | chr1.3:12270670-12270689 | MS.gene91188:CDS | 40.0% |
| !! | GATTGCCCTTTTTAGTGCTT+TGG | + | chr1.3:12271224-12271243 | MS.gene91188:intron | 40.0% |
| !! | GCAAATGGATTAGCTCTAAC+TGG | + | chr1.3:12272708-12272727 | MS.gene91188:CDS | 40.0% |
| !! | TCTGCATCTTTTTCATGGTC+AGG | - | chr1.3:12270541-12270560 | None:intergenic | 40.0% |
| !! | TGGGATGTTTCTTAGCCTTA+TGG | + | chr1.3:12270178-12270197 | MS.gene91188:intron | 40.0% |
| !! | TGTTCGAATGGGATTTGTTG+TGG | + | chr1.3:12268439-12268458 | MS.gene91188:intron | 40.0% |
| !! | TTAACAAGAGCATCCATGCT+TGG | - | chr1.3:12272185-12272204 | None:intergenic | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | chr1.3:12269986-12270005 | MS.gene91188:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr1.3:12270005-12269986 | None:intergenic | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | chr1.3:12269985-12270004 | MS.gene91188:intron | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr1.3:12270004-12269985 | None:intergenic | 40.0% |
| AAAAAGGTGGAGTCCTAGGT+TGG | + | chr1.3:12267462-12267481 | MS.gene91188:intron | 45.0% | |
| AAATGGGAGCCTTGGTACAA+TGG | + | chr1.3:12271052-12271071 | MS.gene91188:intron | 45.0% | |
| AATTCTGCAAAACCTGTCCG+AGG | + | chr1.3:12269430-12269449 | MS.gene91188:intron | 45.0% | |
| AGAGGATGGTTCGTTGAATG+TGG | + | chr1.3:12269653-12269672 | MS.gene91188:CDS | 45.0% | |
| AGATAAATCGGAATGCGCTC+GGG | - | chr1.3:12271451-12271470 | None:intergenic | 45.0% | |
| AGCCCTTTGTGCAAGCAAAT+AGG | - | chr1.3:12270719-12270738 | None:intergenic | 45.0% | |
| ATTAAGCCCTTCTCTGATGG+AGG | - | chr1.3:12270611-12270630 | None:intergenic | 45.0% | |
| CATTCAACGAACCATCCTCT+AGG | - | chr1.3:12269653-12269672 | None:intergenic | 45.0% | |
| CCAATTAAGCCCTTCTCTGA+TGG | - | chr1.3:12270614-12270633 | None:intergenic | 45.0% | |
| CCATCAGAGAAGGGCTTAAT+TGG | + | chr1.3:12270611-12270630 | MS.gene91188:CDS | 45.0% | |
| CTCAACAGCAGCCACAAAAT+TGG | - | chr1.3:12268743-12268762 | None:intergenic | 45.0% | |
| GCAATGTGCGCAACATTTGA+GGG | - | chr1.3:12270871-12270890 | None:intergenic | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | + | chr1.3:12269792-12269811 | MS.gene91188:intron | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | - | chr1.3:12269811-12269792 | None:intergenic | 45.0% | |
| GCATTTACATACGCACCAAC+AGG | - | chr1.3:12272651-12272670 | None:intergenic | 45.0% | |
| GGCGTCTGGTGTATTTAGAT+TGG | - | chr1.3:12270503-12270522 | None:intergenic | 45.0% | |
| GGGCATAGAGACTAAACACA+TGG | - | chr1.3:12271629-12271648 | None:intergenic | 45.0% | |
| GGTACAATAAATGGGAGCCT+TGG | + | chr1.3:12271044-12271063 | MS.gene91188:intron | 45.0% | |
| GGTATCTGTGTCATCCTTCA+TGG | + | chr1.3:12268058-12268077 | MS.gene91188:intron | 45.0% | |
| GGTGCGTATGTAAATGCAAC+TGG | + | chr1.3:12272654-12272673 | MS.gene91188:CDS | 45.0% | |
| GTTGACGTTCCTTACACCAT+TGG | + | chr1.3:12268778-12268797 | MS.gene91188:CDS | 45.0% | |
| TACCCGCACTTGATGAAAGT+TGG | - | chr1.3:12272544-12272563 | None:intergenic | 45.0% | |
| TATCGCTGAAAACTCGGATC+TGG | - | chr1.3:12268912-12268931 | None:intergenic | 45.0% | |
| TGTCATCATCGGAAGAATCG+TGG | - | chr1.3:12266586-12266605 | None:intergenic | 45.0% | |
| TGTGACATGATCCTTCAAGG+GGG | + | chr1.3:12271772-12271791 | MS.gene91188:intron | 45.0% | |
| TTGCGGTATCGCTGAAAACT+CGG | - | chr1.3:12268918-12268937 | None:intergenic | 45.0% | |
| ! | ATCTACAAGGCAGGAGCTTT+TGG | + | chr1.3:12272256-12272275 | MS.gene91188:CDS | 45.0% |
| ! | ATGCTGGTGATGTCTAGTGA+AGG | + | chr1.3:12272624-12272643 | MS.gene91188:CDS | 45.0% |
| ! | CAAACACCAACGACTTTTCG+AGG | - | chr1.3:12269046-12269065 | None:intergenic | 45.0% |
| ! | GATCTGGAAAGAGCATGTAC+AGG | - | chr1.3:12268896-12268915 | None:intergenic | 45.0% |
| ! | GCTGGAGAATTTGCTCGATT+TGG | - | chr1.3:12266523-12266542 | None:intergenic | 45.0% |
| ! | GGAGGATTGTTTTCCAGAAG+AGG | - | chr1.3:12270593-12270612 | None:intergenic | 45.0% |
| ! | GTCAGGTAGCAATGGTGTTA+AGG | - | chr1.3:12270524-12270543 | None:intergenic | 45.0% |
| ! | TGATATGGCTTGGCTACAGT+AGG | + | chr1.3:12271136-12271155 | MS.gene91188:intron | 45.0% |
| ! | TGATCAGAGCTTTCGAGTGT+AGG | + | chr1.3:12270901-12270920 | MS.gene91188:intron | 45.0% |
| ! | TGCATGTTTGGCTCCACTAT+GGG | + | chr1.3:12266816-12266835 | MS.gene91188:intron | 45.0% |
| !! | AACTCTGGGTGCTATTGTGA+TGG | - | chr1.3:12271415-12271434 | None:intergenic | 45.0% |
| !! | AAGAGCATTCTTGCCTGGTT+GGG | + | chr1.3:12270675-12270694 | MS.gene91188:CDS | 45.0% |
| !! | AGGTCAACGTTTTTGGATGG+TGG | + | chr1.3:12268001-12268020 | MS.gene91188:CDS | 45.0% |
| !! | CACAGGTCAACGTTTTTGGA+TGG | + | chr1.3:12267998-12268017 | MS.gene91188:CDS | 45.0% |
| !! | CAGGAGCTTTTGGAGATTGA+TGG | + | chr1.3:12272266-12272285 | MS.gene91188:CDS | 45.0% |
| !! | GATTGGTGACGATGATTACC+TGG | - | chr1.3:12272361-12272380 | None:intergenic | 45.0% |
| !! | GGTCAACGTTTTTGGATGGT+GGG | + | chr1.3:12268002-12268021 | MS.gene91188:CDS | 45.0% |
| !! | TCCCCAGGCCTATTTCTTTT+AGG | + | chr1.3:12268389-12268408 | MS.gene91188:intron | 45.0% |
| !!! | AATTTTGGCTCCTCCCATAG+TGG | - | chr1.3:12266832-12266851 | None:intergenic | 45.0% |
| !!! | GGTCCGAGGGAGTATTTTTT+AGG | + | chr1.3:12272015-12272034 | MS.gene91188:intron | 45.0% |
| !! | TATATATATATATATATATG+GGG | - | chr1.3:12270026-12270045 | None:intergenic | 5.0% |
| !!! | ATTTTATATATGTATATATA+GGG | + | chr1.3:12269757-12269776 | MS.gene91188:intron | 5.0% |
| !!! | TAAACTTTATTTTAATTAAA+AGG | - | chr1.3:12269912-12269931 | None:intergenic | 5.0% |
| !!! | TCTTTTTAATAAATAATTTT+TGG | + | chr1.3:12271670-12271689 | MS.gene91188:intron | 5.0% |
| AATCGTTGGTGCACCAAGCA+TGG | + | chr1.3:12272169-12272188 | MS.gene91188:CDS | 50.0% | |
| ACATACCATCGCGAACTCCA+AGG | + | chr1.3:12270224-12270243 | MS.gene91188:CDS | 50.0% | |
| AGGAGTTGTGCTCTTTCCTG+GGG | + | chr1.3:12268690-12268709 | MS.gene91188:intron | 50.0% | |
| ATAGGGAGCTGTTCCTCTTC+TGG | + | chr1.3:12270577-12270596 | MS.gene91188:CDS | 50.0% | |
| ATGTCTAGTGAAGGCCCTGT+TGG | + | chr1.3:12272633-12272652 | MS.gene91188:CDS | 50.0% | |
| CAACCCCAACCATTGTACCA+AGG | - | chr1.3:12271064-12271083 | None:intergenic | 50.0% | |
| CAGGAGTTGTGCTCTTTCCT+GGG | + | chr1.3:12268689-12268708 | MS.gene91188:intron | 50.0% | |
| CATACCATCGCGAACTCCAA+GGG | + | chr1.3:12270225-12270244 | MS.gene91188:CDS | 50.0% | |
| GAGCCTTGGTACAATGGTTG+GGG | + | chr1.3:12271058-12271077 | MS.gene91188:intron | 50.0% | |
| GCAATTCTTCGAGATCGAGC+TGG | - | chr1.3:12266541-12266560 | None:intergenic | 50.0% | |
| GCTTTCGCTTAAGACGGTGT+TGG | + | chr1.3:12269694-12269713 | MS.gene91188:CDS | 50.0% | |
| GGAGCCTTGGTACAATGGTT+GGG | + | chr1.3:12271057-12271076 | MS.gene91188:intron | 50.0% | |
| GGATTTACCTACCACGCCAA+TGG | - | chr1.3:12268797-12268816 | None:intergenic | 50.0% | |
| GGCAATGTGCGCAACATTTG+AGG | - | chr1.3:12270872-12270891 | None:intergenic | 50.0% | |
| GGGGTTGTTGCTATGTGACA+AGG | + | chr1.3:12271077-12271096 | MS.gene91188:intron | 50.0% | |
| GTGACATGATCCTTCAAGGG+GGG | + | chr1.3:12271773-12271792 | MS.gene91188:intron | 50.0% | |
| TATTGACACTCCCCCCTTGA+AGG | - | chr1.3:12271786-12271805 | None:intergenic | 50.0% | |
| TCAGCGATACCGCAAATCGT+AGG | + | chr1.3:12268923-12268942 | MS.gene91188:CDS | 50.0% | |
| TCAGGAGTTGTGCTCTTTCC+TGG | + | chr1.3:12268688-12268707 | MS.gene91188:intron | 50.0% | |
| TCGTTGAATGTGGTCACTCG+TGG | + | chr1.3:12269663-12269682 | MS.gene91188:CDS | 50.0% | |
| TGATGCCAACGCGAAGCTTA+GGG | - | chr1.3:12271183-12271202 | None:intergenic | 50.0% | |
| TGCAAAGCGGAGTGATATGC+TGG | + | chr1.3:12272608-12272627 | MS.gene91188:CDS | 50.0% | |
| TGGACAGGACTCCTTAAACG+AGG | + | chr1.3:12270327-12270346 | MS.gene91188:CDS | 50.0% | |
| TTGAAGGCAACACACTGGCA+CGG | - | chr1.3:12270294-12270313 | None:intergenic | 50.0% | |
| TTGGATCGATGTGGAAGGAG+TGG | + | chr1.3:12269713-12269732 | MS.gene91188:CDS | 50.0% | |
| ! | AAGACGGTGTTGGATCGATG+TGG | + | chr1.3:12269704-12269723 | MS.gene91188:CDS | 50.0% |
| ! | AGCAATGGTGTTAAGGCGTC+TGG | - | chr1.3:12270517-12270536 | None:intergenic | 50.0% |
| ! | ATGTTTGGCTCCACTATGGG+AGG | + | chr1.3:12266819-12266838 | MS.gene91188:intron | 50.0% |
| ! | CGAACTCCAAGGGATGCTTT+TGG | + | chr1.3:12270235-12270254 | MS.gene91188:CDS | 50.0% |
| ! | GTGCATGTTTGGCTCCACTA+TGG | + | chr1.3:12266815-12266834 | MS.gene91188:intron | 50.0% |
| !! | ATCTGGTGCCATGAAGCTCT+TGG | - | chr1.3:12271207-12271226 | None:intergenic | 50.0% |
| !! | CAAGAGCATTCTTGCCTGGT+TGG | + | chr1.3:12270674-12270693 | MS.gene91188:CDS | 50.0% |
| !! | GGCAAAAGCACCCAAGAATG+TGG | - | chr1.3:12268488-12268507 | None:intergenic | 50.0% |
| AACACACTGGCACGGTTGCA+AGG | - | chr1.3:12270286-12270305 | None:intergenic | 55.0% | |
| CAAAACCTGTCCGAGGAGCT+GGG | + | chr1.3:12269437-12269456 | MS.gene91188:intron | 55.0% | |
| CCAACGCGAAGCTTAGGGAA+TGG | - | chr1.3:12271178-12271197 | None:intergenic | 55.0% | |
| CCATTCCCTAAGCTTCGCGT+TGG | + | chr1.3:12271175-12271194 | MS.gene91188:intron | 55.0% | |
| CCTACCACGCCAATGGTGTA+AGG | - | chr1.3:12268790-12268809 | None:intergenic | 55.0% | |
| CCTTACACCATTGGCGTGGT+AGG | + | chr1.3:12268787-12268806 | MS.gene91188:intron | 55.0% | |
| CGTTCCTTACACCATTGGCG+TGG | + | chr1.3:12268783-12268802 | MS.gene91188:CDS | 55.0% | |
| CTGATGCCAACGCGAAGCTT+AGG | - | chr1.3:12271184-12271203 | None:intergenic | 55.0% | |
| GGCATCAGCCAAGAGCTTCA+TGG | + | chr1.3:12271196-12271215 | MS.gene91188:intron | 55.0% | |
| GGGAGCCTTGGTACAATGGT+TGG | + | chr1.3:12271056-12271075 | MS.gene91188:intron | 55.0% | |
| TGCGCAACATTTGAGGGCTG+AGG | - | chr1.3:12270865-12270884 | None:intergenic | 55.0% | |
| TTGCTTGCACAAAGGGCTGC+AGG | + | chr1.3:12270721-12270740 | MS.gene91188:CDS | 55.0% | |
| ! | CGGTGTTGGATCGATGTGGA+AGG | + | chr1.3:12269708-12269727 | MS.gene91188:CDS | 55.0% |
| !! | AAGCATTGGGACGACTGCAG+AGG | + | chr1.3:12268957-12268976 | MS.gene91188:CDS | 55.0% |
| AGTCCTGGTTATGGCACCGC+AGG | + | chr1.3:12267790-12267809 | MS.gene91188:intron | 60.0% | |
| CTCAAGGGAAGAGTAGCCCC+AGG | - | chr1.3:12268709-12268728 | None:intergenic | 60.0% | |
| CTCTGCACATCCCAGCTCCT+CGG | - | chr1.3:12269450-12269469 | None:intergenic | 60.0% | |
| GCAAAACCTGTCCGAGGAGC+TGG | + | chr1.3:12269436-12269455 | MS.gene91188:intron | 60.0% | |
| GCATCCCTTGGAGTTCGCGA+TGG | - | chr1.3:12270232-12270251 | None:intergenic | 60.0% | |
| CACATCCCAGCTCCTCGGAC+AGG | - | chr1.3:12269445-12269464 | None:intergenic | 65.0% | |
| CAGTACGGGCGCCTAGAGGA+TGG | + | chr1.3:12269639-12269658 | MS.gene91188:CDS | 65.0% | |
| TCGACAGTACGGGCGCCTAG+AGG | + | chr1.3:12269635-12269654 | MS.gene91188:CDS | 65.0% | |
| !! | ACGCCTGCGGTGCCATAACC+AGG | - | chr1.3:12267796-12267815 | None:intergenic | 65.0% |
| TTCACCCGGGACGACGCCTG+CGG | - | chr1.3:12267809-12267828 | None:intergenic | 70.0% | |
| ! | TGGCACCGCAGGCGTCGTCC+CGG | + | chr1.3:12267801-12267820 | MS.gene91188:CDS | 75.0% |
| !! | GGCACCGCAGGCGTCGTCCC+GGG | + | chr1.3:12267802-12267821 | MS.gene91188:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 12266461 | 12272767 | 12266461 | ID=MS.gene91188 |
| chr1.3 | mRNA | 12266461 | 12272767 | 12266461 | ID=MS.gene91188.t1;Parent=MS.gene91188 |
| chr1.3 | exon | 12266461 | 12266639 | 12266461 | ID=MS.gene91188.t1.exon1;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12266461 | 12266639 | 12266461 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| chr1.3 | exon | 12267792 | 12267874 | 12267792 | ID=MS.gene91188.t1.exon2;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12267792 | 12267874 | 12267792 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| chr1.3 | exon | 12267981 | 12268058 | 12267981 | ID=MS.gene91188.t1.exon3;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12267981 | 12268058 | 12267981 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| chr1.3 | exon | 12268692 | 12268804 | 12268692 | ID=MS.gene91188.t1.exon4;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12268692 | 12268804 | 12268692 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| chr1.3 | exon | 12268913 | 12268978 | 12268913 | ID=MS.gene91188.t1.exon5;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12268913 | 12268978 | 12268913 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| chr1.3 | exon | 12269633 | 12269734 | 12269633 | ID=MS.gene91188.t1.exon6;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12269633 | 12269734 | 12269633 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| chr1.3 | exon | 12270193 | 12270742 | 12270193 | ID=MS.gene91188.t1.exon7;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12270193 | 12270742 | 12270193 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| chr1.3 | exon | 12272156 | 12272361 | 12272156 | ID=MS.gene91188.t1.exon8;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12272156 | 12272361 | 12272156 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| chr1.3 | exon | 12272600 | 12272767 | 12272600 | ID=MS.gene91188.t1.exon9;Parent=MS.gene91188.t1 |
| chr1.3 | CDS | 12272600 | 12272767 | 12272600 | ID=cds.MS.gene91188.t1;Parent=MS.gene91188.t1 |
| Gene Sequence |
| Protein sequence |
