AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91355

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91355.t1 MTR_8g043650 90.717 237 22 0 1 237 1 237 9.11e-161 444
MS.gene91355.t1 MTR_1g105910 91.139 237 21 0 1 237 1 237 3.64e-155 430
MS.gene91355.t1 MTR_1g105920 92.237 219 17 0 1 219 1 219 2.96e-152 423
MS.gene91355.t1 MTR_2g030740 91.561 237 20 0 1 237 1 237 8.30e-152 422
MS.gene91355.t1 MTR_3g052920 87.671 219 27 0 1 219 1 219 9.18e-145 404
MS.gene91355.t1 MTR_1g012570 88.608 237 27 0 1 237 1 237 4.80e-144 402
MS.gene91355.t1 MTR_1g105905 82.727 220 38 0 18 237 1 220 6.62e-135 378
MS.gene91355.t1 MTR_3g052870 81.279 219 22 1 1 219 1 200 2.39e-126 357
MS.gene91355.t1 MTR_0121s0080 72.152 237 65 1 1 237 1 236 2.49e-121 345
MS.gene91355.t1 MTR_5g055100 68.354 237 75 0 1 237 1 237 5.14e-121 344
MS.gene91355.t1 MTR_3g030770 74.043 235 43 3 1 225 1 227 8.82e-121 343
MS.gene91355.t1 MTR_1g077360 72.444 225 62 0 1 225 1 225 1.12e-120 343
MS.gene91355.t1 MTR_1g108510 74.468 235 42 3 1 225 1 227 2.03e-120 342
MS.gene91355.t1 MTR_2g085280 67.373 236 77 0 1 236 1 236 9.98e-119 338
MS.gene91355.t1 MTR_1g075600 72.000 225 63 0 1 225 1 225 1.62e-118 337
MS.gene91355.t1 MTR_2g093190 73.617 235 44 3 1 225 1 227 2.68e-118 337
MS.gene91355.t1 MTR_1g106070 88.462 182 21 0 1 182 1 182 2.77e-118 335
MS.gene91355.t1 MTR_2g085250 67.373 236 77 0 1 236 1 236 3.44e-118 337
MS.gene91355.t1 MTR_5g045560 70.886 237 69 0 1 237 1 237 9.89e-116 330
MS.gene91355.t1 MTR_1g108580 71.489 235 49 3 1 225 1 227 1.42e-114 327
MS.gene91355.t1 MTR_5g053390 69.778 225 68 0 1 225 1 225 4.32e-114 326
MS.gene91355.t1 MTR_7g062350 64.831 236 81 2 3 237 14 248 1.00e-102 298
MS.gene91355.t1 MTR_0121s0100 78.906 128 27 0 1 128 1 128 2.74e-69 209
MS.gene91355.t1 MTR_1g075570 64.045 178 50 1 18 195 1 164 2.99e-69 210
MS.gene91355.t1 MTR_3g030780 75.000 132 33 0 1 132 1 132 1.65e-65 199
MS.gene91355.t1 MTR_3g080940 56.024 166 73 0 7 172 7 172 4.78e-65 201
MS.gene91355.t1 MTR_3g067910 69.608 102 31 0 21 122 2 103 5.04e-47 151
MS.gene91355.t1 MTR_2g105290 39.766 171 93 2 5 172 8 171 7.52e-41 138
MS.gene91355.t1 MTR_8g086290 41.566 166 87 2 5 167 8 166 1.31e-40 137
MS.gene91355.t1 MTR_7g028448 44.516 155 74 3 5 159 8 150 1.34e-34 122
MS.gene91355.t1 MTR_4g036915 44.516 155 74 3 5 159 8 150 1.34e-34 122
MS.gene91355.t1 MTR_1g108500 64.948 97 13 1 22 118 110 185 7.87e-32 119
MS.gene91355.t1 MTR_4g127140 37.500 184 95 4 5 175 8 184 4.69e-31 113
MS.gene91355.t1 MTR_3g067875 82.143 56 10 0 18 73 1 56 2.32e-26 97.8
MS.gene91355.t1 MTR_3g067915 52.128 94 45 0 33 126 3 96 1.98e-25 96.3
MS.gene91355.t1 MTR_1g047550 62.319 69 26 0 9 77 2 70 1.26e-24 96.7
MS.gene91355.t1 MTR_8g079502 62.319 69 26 0 9 77 2 70 3.11e-24 95.5
MS.gene91355.t1 MTR_4g131030 40.517 116 54 2 9 109 2 117 1.24e-23 94.7
MS.gene91355.t1 MTR_1g054265 46.535 101 52 1 9 109 2 100 1.37e-23 93.6
MS.gene91355.t1 MTR_1g063160 48.544 103 51 2 9 109 2 104 1.56e-23 93.6
MS.gene91355.t1 MTR_8g051580 42.857 126 67 2 9 131 2 125 1.80e-23 93.6
MS.gene91355.t1 MTR_3g067870 68.254 63 20 0 16 78 83 145 2.91e-23 92.4
MS.gene91355.t1 MTR_8g046350 40.152 132 67 3 9 135 2 126 1.30e-22 90.9
MS.gene91355.t1 MTR_4g094632 40.708 113 64 2 9 120 2 112 1.46e-20 85.1
MS.gene91355.t1 MTR_4g093970 33.939 165 86 3 10 153 29 191 3.10e-19 83.6
MS.gene91355.t1 MTR_3g005530 52.941 68 32 0 9 76 2 69 3.89e-19 83.2
MS.gene91355.t1 MTR_3g452380 42.453 106 51 1 3 108 11 106 5.82e-19 83.2
MS.gene91355.t1 MTR_4g094638 41.509 106 61 1 9 113 2 107 1.77e-18 80.1
MS.gene91355.t1 MTR_1g053070 36.667 150 80 3 9 157 2 137 2.14e-18 81.6
MS.gene91355.t1 MTR_4g102530 50.685 73 36 0 10 82 3 75 2.91e-18 80.5
MS.gene91355.t1 MTR_8g022970 33.544 158 92 3 8 159 17 167 5.70e-18 79.0
MS.gene91355.t1 MTR_8g033270 33.929 168 95 5 9 167 2 162 1.04e-17 79.7
MS.gene91355.t1 MTR_3g437790 35.664 143 75 4 26 159 30 164 1.57e-17 77.8
MS.gene91355.t1 MTR_5g066180 51.471 68 33 0 9 76 2 69 1.76e-17 78.6
MS.gene91355.t1 MTR_2g017865 41.346 104 60 1 9 112 17 119 2.63e-17 79.0
MS.gene91355.t1 MTR_8g087860 51.471 68 33 0 9 76 18 85 3.02e-17 78.6
MS.gene91355.t1 MTR_3g102570 42.308 104 57 3 9 111 2 103 5.82e-17 78.6
MS.gene91355.t1 MTR_5g032520 29.108 213 127 6 9 201 2 210 8.21e-17 77.0
MS.gene91355.t1 MTR_5g032150 30.047 213 126 8 9 201 2 211 1.32e-16 76.3
MS.gene91355.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 1.32e-16 75.5
MS.gene91355.t1 MTR_6g464720 49.275 69 34 1 9 76 2 70 1.36e-16 76.6
MS.gene91355.t1 MTR_4g109830 47.826 69 35 1 9 76 2 70 1.48e-16 76.3
MS.gene91355.t1 MTR_8g033220 47.436 78 41 0 10 87 3 80 1.61e-16 76.3
MS.gene91355.t1 MTR_7g075870 38.182 110 66 1 10 119 3 110 1.63e-16 75.9
MS.gene91355.t1 MTR_8g033220 47.436 78 41 0 10 87 3 80 1.83e-16 75.9
MS.gene91355.t1 MTR_2g009890 48.529 68 35 0 9 76 2 69 3.73e-16 75.9
MS.gene91355.t1 MTR_0003s0590 42.683 82 47 0 9 90 2 83 6.51e-16 75.1
MS.gene91355.t1 MTR_6g015975 49.275 69 34 1 9 76 2 70 1.34e-15 73.9
MS.gene91355.t1 MTR_4g084740 47.368 76 38 2 9 83 2 76 1.41e-15 75.1
MS.gene91355.t1 MTR_7g016600 49.275 69 34 1 9 76 2 70 1.45e-15 73.9
MS.gene91355.t1 MTR_2g461710 55.357 56 25 0 9 64 2 57 1.62e-15 69.3
MS.gene91355.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 1.65e-15 73.2
MS.gene91355.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 1.77e-15 73.6
MS.gene91355.t1 MTR_8g066260 40.964 83 46 1 9 91 2 81 1.78e-15 73.6
MS.gene91355.t1 MTR_5g046790 45.070 71 36 1 9 79 2 69 3.22e-15 72.4
MS.gene91355.t1 MTR_7g075870 37.838 111 66 2 10 119 3 111 3.39e-15 72.4
MS.gene91355.t1 MTR_5g021270 50.000 70 33 1 9 76 2 71 5.66e-15 72.0
MS.gene91355.t1 MTR_5g021270 50.000 70 33 1 9 76 2 71 5.92e-15 72.0
MS.gene91355.t1 MTR_5g046870 47.826 69 35 1 9 76 2 70 6.05e-15 69.3
MS.gene91355.t1 MTR_3g109930 32.090 134 87 2 27 159 20 150 1.53e-14 69.7
MS.gene91355.t1 MTR_4g109810 28.750 240 138 12 9 230 2 226 2.31e-14 70.5
MS.gene91355.t1 MTR_7g016630 43.478 69 38 1 9 76 2 70 2.63e-14 70.5
MS.gene91355.t1 MTR_1g038300 47.143 70 35 1 9 76 2 71 2.87e-14 70.1
MS.gene91355.t1 MTR_3g088615 44.286 70 37 1 9 76 2 71 3.27e-14 68.9
MS.gene91355.t1 MTR_5g066960 49.123 57 29 0 9 65 2 58 4.11e-14 65.5
MS.gene91355.t1 MTR_1g029670 46.970 66 34 1 9 74 2 66 5.81e-14 68.2
MS.gene91355.t1 MTR_7g075850 45.714 70 36 1 9 76 2 71 5.82e-14 69.3
MS.gene91355.t1 MTR_8g097090 46.377 69 36 1 9 76 2 70 7.10e-14 69.3
MS.gene91355.t1 MTR_3g084980 47.826 69 35 1 9 76 2 70 7.97e-14 68.9
MS.gene91355.t1 MTR_3g113030 28.814 177 98 5 9 181 2 154 1.43e-13 68.2
MS.gene91355.t1 MTR_4g093030 41.892 74 43 0 9 82 2 75 3.04e-12 63.2
MS.gene91355.t1 MTR_4g108720 28.977 176 103 9 9 172 2 167 6.17e-12 64.7
MS.gene91355.t1 MTR_2g045020 31.288 163 84 7 7 159 21 165 8.57e-12 62.4
MS.gene91355.t1 MTR_4g051538 29.703 202 113 6 5 198 5 185 9.51e-12 63.2
MS.gene91355.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 2.73e-11 60.8
MS.gene91355.t1 MTR_4g036050 29.375 160 100 5 9 158 2 158 3.02e-11 60.8
MS.gene91355.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 3.30e-11 60.8
MS.gene91355.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 3.46e-11 60.8
MS.gene91355.t1 MTR_1g041615 36.190 105 58 2 20 123 17 113 9.37e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91355.t1 AT5G60440 56.452 186 74 3 5 187 3 184 1.50e-64 202
MS.gene91355.t1 AT2G24840 50.000 164 71 4 6 163 60 218 9.57e-46 153
MS.gene91355.t1 AT1G01530 43.750 192 96 4 4 192 2 184 5.38e-43 146
MS.gene91355.t1 AT1G65360 40.529 227 120 6 5 225 3 220 9.18e-43 144
MS.gene91355.t1 AT4G36590 46.951 164 77 4 5 160 3 164 5.01e-40 138
MS.gene91355.t1 AT2G34440 45.299 117 55 2 9 121 2 113 8.51e-27 102
MS.gene91355.t1 AT3G04100 32.716 162 105 3 2 159 7 168 5.73e-26 100
MS.gene91355.t1 AT3G66656 43.697 119 63 1 9 123 2 120 1.22e-25 99.4
MS.gene91355.t1 AT1G72350 36.184 152 64 4 9 160 43 161 3.45e-23 94.0
MS.gene91355.t1 AT1G28460 29.586 169 115 2 5 169 4 172 2.47e-20 85.5
MS.gene91355.t1 AT4G22950 49.351 77 39 0 10 86 3 79 2.11e-19 82.8
MS.gene91355.t1 AT4G09960 46.512 86 45 1 9 93 2 87 2.41e-19 83.6
MS.gene91355.t1 AT4G09960 46.512 86 45 1 9 93 2 87 2.71e-19 83.6
MS.gene91355.t1 AT4G09960 46.512 86 45 1 9 93 3 88 3.03e-19 83.6
MS.gene91355.t1 AT1G29962 29.651 172 114 4 5 169 4 175 3.63e-19 82.4
MS.gene91355.t1 AT4G09960 46.512 86 45 1 9 93 12 97 3.89e-19 83.6
MS.gene91355.t1 AT4G22950 40.909 110 62 1 10 119 3 109 5.04e-19 82.8
MS.gene91355.t1 AT4G22950 40.909 110 62 1 10 119 3 109 5.04e-19 82.8
MS.gene91355.t1 AT4G09960 46.512 86 45 1 9 93 28 113 5.63e-19 83.6
MS.gene91355.t1 AT4G18960 31.933 238 136 10 5 226 15 242 6.55e-19 83.2
MS.gene91355.t1 AT2G45660 52.941 68 32 0 10 77 3 70 1.06e-18 80.5
MS.gene91355.t1 AT2G45650 52.941 68 32 0 9 76 2 69 1.30e-18 82.4
MS.gene91355.t1 AT4G09960 46.512 86 45 1 9 93 97 182 1.56e-18 83.2
MS.gene91355.t1 AT2G45660 52.941 68 32 0 10 77 3 70 3.13e-18 80.5
MS.gene91355.t1 AT2G22540 39.130 138 64 5 9 132 2 133 1.84e-17 79.0
MS.gene91355.t1 AT2G22540 39.130 138 64 5 9 132 2 133 1.84e-17 79.0
MS.gene91355.t1 AT3G57230 47.059 68 36 0 9 76 2 69 3.39e-17 76.3
MS.gene91355.t1 AT5G51870 53.731 67 31 0 10 76 3 69 3.49e-17 76.6
MS.gene91355.t1 AT2G42830 47.368 76 40 0 1 76 9 84 3.65e-17 78.2
MS.gene91355.t1 AT2G42830 47.368 76 40 0 1 76 9 84 3.72e-17 78.2
MS.gene91355.t1 AT5G51870 53.731 67 31 0 10 76 3 69 4.13e-17 77.4
MS.gene91355.t1 AT3G58780 50.704 71 35 0 6 76 14 84 4.20e-17 78.2
MS.gene91355.t1 AT3G58780 50.704 71 35 0 6 76 20 90 4.28e-17 78.2
MS.gene91355.t1 AT3G61120 51.471 68 33 0 9 76 2 69 5.37e-17 77.8
MS.gene91355.t1 AT5G51870 50.000 72 36 0 5 76 21 92 7.65e-17 76.3
MS.gene91355.t1 AT1G17310 36.905 168 65 5 8 170 47 178 7.86e-17 76.6
MS.gene91355.t1 AT5G51870 53.731 67 31 0 10 76 3 69 7.90e-17 77.0
MS.gene91355.t1 AT4G24540 51.471 68 33 0 9 76 2 69 7.95e-17 77.0
MS.gene91355.t1 AT3G58780 50.704 71 35 0 6 76 14 84 8.23e-17 77.8
MS.gene91355.t1 AT1G17310 36.905 168 65 5 8 170 58 189 9.68e-17 76.6
MS.gene91355.t1 AT5G51870 53.731 67 31 0 10 76 13 79 9.74e-17 76.6
MS.gene91355.t1 AT3G57390 50.000 68 34 0 9 76 2 69 1.11e-16 76.6
MS.gene91355.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.17e-16 75.1
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.46e-16 73.2
MS.gene91355.t1 AT1G22130 37.143 105 65 1 9 112 2 106 1.47e-16 77.8
MS.gene91355.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.48e-16 75.9
MS.gene91355.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.56e-16 76.3
MS.gene91355.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.61e-16 75.1
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.68e-16 74.7
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.68e-16 74.7
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.68e-16 74.7
MS.gene91355.t1 AT5G13790 43.011 93 44 1 9 101 2 85 1.91e-16 76.6
MS.gene91355.t1 AT3G57230 47.059 68 36 0 9 76 2 69 1.93e-16 76.3
MS.gene91355.t1 AT3G57230 47.059 68 36 0 9 76 2 69 1.93e-16 76.3
MS.gene91355.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.93e-16 75.1
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.03e-16 74.3
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.03e-16 74.3
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.03e-16 74.3
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.03e-16 74.3
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.03e-16 74.3
MS.gene91355.t1 AT1G77980 38.095 105 64 1 9 112 2 106 2.04e-16 77.4
MS.gene91355.t1 AT5G10140 50.725 69 33 1 9 76 2 70 2.23e-16 75.1
MS.gene91355.t1 AT5G10140 50.725 69 33 1 9 76 2 70 2.23e-16 75.1
MS.gene91355.t1 AT1G28450 27.950 161 110 3 5 159 4 164 2.45e-16 74.7
MS.gene91355.t1 AT5G13790 51.471 68 33 0 9 76 2 69 2.61e-16 76.3
MS.gene91355.t1 AT3G57390 50.000 68 34 0 9 76 2 69 2.62e-16 76.3
MS.gene91355.t1 AT4G11880 48.611 72 36 1 10 80 3 74 4.03e-16 73.9
MS.gene91355.t1 AT4G11880 48.611 72 36 1 10 80 3 74 4.03e-16 73.9
MS.gene91355.t1 AT5G51860 52.239 67 32 0 10 76 3 69 4.71e-16 74.3
MS.gene91355.t1 AT1G69120 43.373 83 44 1 9 91 2 81 4.91e-16 75.1
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 6.69e-16 73.9
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 6.69e-16 73.9
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 6.88e-16 73.9
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 6.88e-16 73.9
MS.gene91355.t1 AT5G62165 49.254 67 34 0 10 76 3 69 6.88e-16 73.9
MS.gene91355.t1 AT1G77950 46.053 76 39 2 9 83 2 76 7.00e-16 74.7
MS.gene91355.t1 AT1G77950 46.053 76 39 2 9 83 2 76 7.00e-16 74.7
MS.gene91355.t1 AT1G77950 46.053 76 39 2 9 83 2 76 7.00e-16 74.7
MS.gene91355.t1 AT1G77950 46.053 76 39 2 9 83 2 76 7.00e-16 74.7
MS.gene91355.t1 AT5G51860 52.239 67 32 0 10 76 3 69 7.30e-16 73.9
MS.gene91355.t1 AT5G60910 49.296 71 33 1 9 79 2 69 7.58e-16 74.7
MS.gene91355.t1 AT2G22630 47.059 68 36 0 9 76 2 69 7.77e-16 74.3
MS.gene91355.t1 AT2G22630 47.059 68 36 0 9 76 2 69 7.77e-16 74.3
MS.gene91355.t1 AT4G11880 48.611 72 36 1 10 80 3 74 8.38e-16 73.9
MS.gene91355.t1 AT4G11880 48.611 72 36 1 10 80 3 74 8.38e-16 73.9
MS.gene91355.t1 AT1G69120 40.659 91 51 1 9 99 2 89 9.60e-16 74.7
MS.gene91355.t1 AT1G24260 30.000 240 134 9 9 234 2 221 1.02e-15 74.3
MS.gene91355.t1 AT1G26310 47.826 69 35 1 9 76 2 70 1.27e-15 74.3
MS.gene91355.t1 AT3G54340 47.143 70 35 1 9 76 2 71 1.53e-15 73.6
MS.gene91355.t1 AT3G30260 46.377 69 36 1 9 76 2 70 1.66e-15 73.9
MS.gene91355.t1 AT5G15800 49.275 69 34 1 9 76 2 70 2.97e-15 73.2
MS.gene91355.t1 AT1G24260 28.685 251 137 9 9 234 2 235 4.06e-15 72.8
MS.gene91355.t1 AT5G20240 47.143 70 35 1 9 76 2 71 4.97e-15 70.5
MS.gene91355.t1 AT5G15800 49.275 69 34 1 9 76 2 70 5.11e-15 72.8
MS.gene91355.t1 AT2G14210 46.377 69 36 1 9 76 2 70 5.46e-15 72.0
MS.gene91355.t1 AT5G20240 47.143 70 35 1 9 76 2 71 6.73e-15 71.2
MS.gene91355.t1 AT2G14210 46.377 69 36 1 9 76 2 70 6.99e-15 72.0
MS.gene91355.t1 AT2G22540 38.406 138 60 6 9 132 2 128 7.73e-15 71.6
MS.gene91355.t1 AT5G23260 43.299 97 47 3 2 90 9 105 1.49e-14 71.6
MS.gene91355.t1 AT5G23260 43.299 97 47 3 2 90 9 105 1.58e-14 71.2
MS.gene91355.t1 AT5G65050 46.377 69 36 1 9 76 2 70 1.67e-14 69.7
MS.gene91355.t1 AT3G58780 52.459 61 29 0 6 66 14 74 1.84e-14 70.9
MS.gene91355.t1 AT3G02310 47.826 69 35 1 9 76 2 70 1.89e-14 70.1
MS.gene91355.t1 AT1G24260 29.084 251 135 11 9 234 2 234 2.22e-14 70.9
MS.gene91355.t1 AT3G58780 52.459 61 29 0 6 66 14 74 2.63e-14 70.9
MS.gene91355.t1 AT5G65050 46.377 69 36 1 9 76 2 70 2.83e-14 69.3
MS.gene91355.t1 AT5G23260 44.318 88 43 2 9 90 2 89 2.95e-14 70.1
MS.gene91355.t1 AT5G23260 44.318 88 43 2 9 90 2 89 2.96e-14 70.5
MS.gene91355.t1 AT5G65050 46.377 69 36 1 9 76 2 70 3.00e-14 69.3
MS.gene91355.t1 AT5G65050 46.377 69 36 1 9 76 2 70 3.25e-14 68.9
MS.gene91355.t1 AT2G03710 53.571 56 26 0 9 64 2 57 4.75e-14 68.6
MS.gene91355.t1 AT3G02310 47.826 69 35 1 9 76 2 70 5.04e-14 69.7
MS.gene91355.t1 AT5G65060 46.377 69 36 1 9 76 2 70 5.10e-14 68.6
MS.gene91355.t1 AT5G65060 46.377 69 36 1 9 76 2 70 5.33e-14 68.6
MS.gene91355.t1 AT5G65060 46.377 69 36 1 9 76 2 70 6.16e-14 68.6
MS.gene91355.t1 AT1G47760 34.483 116 61 3 9 123 2 103 6.49e-14 68.2
MS.gene91355.t1 AT2G03710 45.714 70 36 1 9 76 2 71 1.08e-13 68.9
MS.gene91355.t1 AT2G03710 45.714 70 36 1 9 76 2 71 1.12e-13 68.9
MS.gene91355.t1 AT1G71692 44.286 70 38 1 9 77 2 71 2.25e-13 67.4
MS.gene91355.t1 AT5G65070 42.029 69 39 1 9 76 2 70 2.83e-13 65.5
MS.gene91355.t1 AT5G65070 42.029 69 39 1 9 76 2 70 5.68e-13 65.9
MS.gene91355.t1 AT5G65070 42.029 69 39 1 9 76 2 70 1.04e-12 65.9
MS.gene91355.t1 AT5G65070 42.029 69 39 1 9 76 2 70 1.13e-12 65.5
MS.gene91355.t1 AT1G18750 27.053 207 129 7 9 195 2 206 1.57e-12 66.6
MS.gene91355.t1 AT1G18750 27.053 207 129 7 9 195 2 206 1.69e-12 66.6
MS.gene91355.t1 AT1G18750 38.667 75 44 1 9 81 2 76 5.30e-12 65.1
MS.gene91355.t1 AT5G65070 47.368 57 30 0 9 65 2 58 5.43e-12 63.9
MS.gene91355.t1 AT2G03060 28.655 171 105 7 9 164 2 170 6.03e-12 64.7
MS.gene91355.t1 AT2G03060 28.655 171 105 7 9 164 2 170 6.03e-12 64.7
MS.gene91355.t1 AT2G03060 28.655 171 105 7 9 164 2 170 6.03e-12 64.7
MS.gene91355.t1 AT2G03060 28.655 171 105 7 9 164 2 170 6.71e-12 64.7
MS.gene91355.t1 AT1G69540 33.636 110 65 3 9 117 2 104 1.25e-11 63.9
MS.gene91355.t1 AT1G46408 36.134 119 67 4 10 119 5 123 1.46e-11 63.2
MS.gene91355.t1 AT1G69540 33.636 110 65 3 9 117 2 104 1.52e-11 63.5
MS.gene91355.t1 AT5G65080 42.667 75 40 2 5 76 3 77 2.71e-11 61.2
MS.gene91355.t1 AT4G37435 40.278 72 42 1 9 79 2 73 3.09e-11 60.8
MS.gene91355.t1 AT2G26320 40.000 70 40 1 9 76 18 87 4.57e-11 58.5
MS.gene91355.t1 AT5G65080 43.548 62 35 0 1 62 1 62 7.04e-11 60.1
MS.gene91355.t1 AT5G27130 40.000 85 47 2 2 82 6 90 7.45e-11 61.2

Find 62 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTTTGGTTTCAACAATA+TGG 0.234944 1.3:-72431680 MS.gene91355:CDS
AGGCGACCGAAGCTCAATTT+TGG 0.280062 1.3:-72431951 MS.gene91355:CDS
CTTGTGGAGGATTTGGTTGA+TGG 0.298622 1.3:+72431752 None:intergenic
ATCTGAGCTTGTGGAGGATT+TGG 0.314155 1.3:+72431745 None:intergenic
TGGTGGGCTGGTCCCGTTGA+TGG 0.316276 1.3:-72431931 MS.gene91355:CDS
ATTGCATGGTACCATTGTTT+TGG 0.328016 1.3:+72432088 None:intergenic
TTGTTTGGTTTCAACAATAT+GGG 0.345119 1.3:-72431679 MS.gene91355:CDS
TGAATTATTCAAGAAGGCTT+TGG 0.346261 1.3:-72431890 MS.gene91355:CDS
TGCTGATAGGCTTGTAATCC+AGG 0.383576 1.3:-72431839 MS.gene91355:CDS
ATGTTGCAACCTCATTTGTT+TGG 0.384083 1.3:-72431694 MS.gene91355:CDS
TTGTTGCTCATCATGCTGAT+AGG 0.403840 1.3:-72431852 MS.gene91355:CDS
TCTTCTCGATGTCCAGTAGT+TGG 0.408924 1.3:+72432004 None:intergenic
GTCCCGTTGATGGGATGAAT+AGG 0.432754 1.3:-72431921 MS.gene91355:CDS
TCTATGACCGTATCAACATT+GGG 0.442152 1.3:+72432135 None:intergenic
CTTCTTGAATAATTCAAGTT+GGG 0.442228 1.3:+72431897 None:intergenic
CACTTGCAAGTTGCTTTCGT+TGG 0.444023 1.3:+72432278 None:intergenic
GGTGGGCTGGTCCCGTTGAT+GGG 0.452333 1.3:-72431930 MS.gene91355:CDS
TCCCGTTGATGGGATGAATA+GGG 0.453040 1.3:-72431920 MS.gene91355:CDS
CCTTCTTGAATAATTCAAGT+TGG 0.480564 1.3:+72431896 None:intergenic
GCCCTATTCATCCCATCAAC+GGG 0.481029 1.3:+72431919 None:intergenic
GTGGAGGATTTGGTTGATGG+TGG 0.481407 1.3:+72431755 None:intergenic
AACAAATGAGGTTGCAACAT+AGG 0.496587 1.3:+72431697 None:intergenic
CCAACTTGAATTATTCAAGA+AGG 0.499244 1.3:-72431896 MS.gene91355:CDS
AGTATTGAGCTCGCGCACAT+TGG 0.504609 1.3:+72432044 None:intergenic
ATCTATGACCGTATCAACAT+TGG 0.506195 1.3:+72432134 None:intergenic
AGCCCACCAAAATTGAGCTT+CGG 0.515026 1.3:+72431945 None:intergenic
ACAGAGGGTGCAAAGCTCAC+TGG 0.525840 1.3:+72432218 None:intergenic
ACAAATGAGGTTGCAACATA+GGG 0.527904 1.3:+72431698 None:intergenic
GGCCCTATTCATCCCATCAA+CGG 0.536262 1.3:+72431918 None:intergenic
GACTCAGATCAACCAACTAC+TGG 0.537057 1.3:-72432016 MS.gene91355:CDS
GGGCTCGGATCAAAAGAATC+CGG 0.538178 1.3:+72431633 None:intergenic
TGGCCACCCCAATGTTGATA+CGG 0.542985 1.3:-72432142 MS.gene91355:CDS
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 1.3:-72432254 MS.gene91355:CDS
TGTTTGGTTTCAACAATATG+GGG 0.556331 1.3:-72431678 MS.gene91355:CDS
TTGTTGAAACCAAACAAATG+AGG 0.558095 1.3:+72431685 None:intergenic
CTTCAACCATGTCGAGTGGA+AGG 0.562158 1.3:-72432341 None:intergenic
AACGAAAATACCTTCTCCCC+AGG 0.564049 1.3:+72432165 None:intergenic
GGAGGTGGATATGGTCCCTC+CGG 0.565894 1.3:-72431652 MS.gene91355:CDS
GCTGGAAACATCTGAGCTTG+TGG 0.568464 1.3:+72431736 None:intergenic
GGATTTGGTTGATGGTGGAG+AGG 0.568530 1.3:+72431760 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 1.3:-72432255 MS.gene91355:CDS
AGAGCTAAGCGACTTGCGCA+AGG 0.585527 1.3:-72431971 MS.gene91355:CDS
AGTGAGCTTTGCACCCTCTG+TGG 0.587031 1.3:-72432216 MS.gene91355:CDS
ATGGTGGAGAGGCATGTTCG+AGG 0.589348 1.3:+72431771 None:intergenic
AGCAACATCTGCACCACAGA+GGG 0.595144 1.3:+72432203 None:intergenic
TGCGCTTCAACCATGTCGAG+TGG 0.601726 1.3:-72432345 None:intergenic
TGGTTTGAGTAGGAGCACCC+TGG 0.605264 1.3:+72431821 None:intergenic
GTTTGGTTTCAACAATATGG+GGG 0.607401 1.3:-72431677 MS.gene91355:CDS
CGAGTCCCGCCCCAAAACAA+TGG 0.608244 1.3:-72432099 MS.gene91355:CDS
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 1.3:+72432241 None:intergenic
GCTGATAGGCTTGTAATCCA+GGG 0.636302 1.3:-72431838 MS.gene91355:CDS
TGGTGGAGAGGCATGTTCGA+GGG 0.636955 1.3:+72431772 None:intergenic
TTTGGTTTCAACAATATGGG+GGG 0.638238 1.3:-72431676 MS.gene91355:CDS
TGGTACCATGCAATTCATTG+AGG 0.638950 1.3:-72432079 MS.gene91355:CDS
GGAAACATCTGAGCTTGTGG+AGG 0.645017 1.3:+72431739 None:intergenic
CTCGGATCAAAAGAATCCGG+AGG 0.655264 1.3:+72431636 None:intergenic
TGACCGTATCAACATTGGGG+TGG 0.665619 1.3:+72432139 None:intergenic
TCGGATCAAAAGAATCCGGA+GGG 0.673953 1.3:+72431637 None:intergenic
ATGAGCCTCAATGAATTGCA+TGG 0.679678 1.3:+72432074 None:intergenic
TCGAGTGGAAGGAAAAGCCG+AGG 0.691796 1.3:-72432330 MS.gene91355:CDS
CTATGACCGTATCAACATTG+GGG 0.709949 1.3:+72432136 None:intergenic
GAGCAACATCTGCACCACAG+AGG 0.729838 1.3:+72432202 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCATCTCAATCTTT+TGG + chr1.3:72431674-72431693 None:intergenic 20.0%
!! CTTCTTGAATAATTCAAGTT+GGG + chr1.3:72432081-72432100 None:intergenic 25.0%
!! TTGTTTGGTTTCAACAATAT+GGG - chr1.3:72432296-72432315 MS.gene91355:CDS 25.0%
!! TTTGTTTGGTTTCAACAATA+TGG - chr1.3:72432295-72432314 MS.gene91355:CDS 25.0%
!!! ATTCAGTTTTTTGTTGGAAA+CGG - chr1.3:72432176-72432195 MS.gene91355:CDS 25.0%
AAAAACTGAATGGTTTGAGT+AGG + chr1.3:72432167-72432186 None:intergenic 30.0%
CCAACTTGAATTATTCAAGA+AGG - chr1.3:72432079-72432098 MS.gene91355:CDS 30.0%
CCTTCTTGAATAATTCAAGT+TGG + chr1.3:72432082-72432101 None:intergenic 30.0%
GTTTCCAACAAAAAACTGAA+TGG + chr1.3:72432177-72432196 None:intergenic 30.0%
TGAATTATTCAAGAAGGCTT+TGG - chr1.3:72432085-72432104 MS.gene91355:CDS 30.0%
TTGTTGAAACCAAACAAATG+AGG + chr1.3:72432293-72432312 None:intergenic 30.0%
! TGTTTGGTTTCAACAATATG+GGG - chr1.3:72432297-72432316 MS.gene91355:CDS 30.0%
!!! CAAACCATTCAGTTTTTTGT+TGG - chr1.3:72432170-72432189 MS.gene91355:CDS 30.0%
AACAAATGAGGTTGCAACAT+AGG + chr1.3:72432281-72432300 None:intergenic 35.0%
ACAAATGAGGTTGCAACATA+GGG + chr1.3:72432280-72432299 None:intergenic 35.0%
ATCTATGACCGTATCAACAT+TGG + chr1.3:72431844-72431863 None:intergenic 35.0%
ATGTTGCAACCTCATTTGTT+TGG - chr1.3:72432281-72432300 MS.gene91355:CDS 35.0%
TCTATGACCGTATCAACATT+GGG + chr1.3:72431843-72431862 None:intergenic 35.0%
! ATTGCATGGTACCATTGTTT+TGG + chr1.3:72431890-72431909 None:intergenic 35.0%
! GTTTGGTTTCAACAATATGG+GGG - chr1.3:72432298-72432317 MS.gene91355:CDS 35.0%
! TTGCATGGTACCATTGTTTT+GGG + chr1.3:72431889-72431908 None:intergenic 35.0%
! TTTGGTTTCAACAATATGGG+GGG - chr1.3:72432299-72432318 MS.gene91355:CDS 35.0%
ATGAGCCTCAATGAATTGCA+TGG + chr1.3:72431904-72431923 None:intergenic 40.0%
CTATGACCGTATCAACATTG+GGG + chr1.3:72431842-72431861 None:intergenic 40.0%
TGGTACCATGCAATTCATTG+AGG - chr1.3:72431896-72431915 MS.gene91355:CDS 40.0%
TTGTTGCTCATCATGCTGAT+AGG - chr1.3:72432123-72432142 MS.gene91355:CDS 40.0%
!! GGGTTCTGAAAAAATTGTGC+TGG + chr1.3:72432260-72432279 None:intergenic 40.0%
!! TGCATGGTACCATTGTTTTG+GGG + chr1.3:72431888-72431907 None:intergenic 40.0%
AACGAAAATACCTTCTCCCC+AGG + chr1.3:72431813-72431832 None:intergenic 45.0%
AGCCCACCAAAATTGAGCTT+CGG + chr1.3:72432033-72432052 None:intergenic 45.0%
ATCTGAGCTTGTGGAGGATT+TGG + chr1.3:72432233-72432252 None:intergenic 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + chr1.3:72431737-72431756 None:intergenic 45.0%
GACTCAGATCAACCAACTAC+TGG - chr1.3:72431959-72431978 MS.gene91355:CDS 45.0%
GCTGATAGGCTTGTAATCCA+GGG - chr1.3:72432137-72432156 MS.gene91355:CDS 45.0%
TCTTCTCGATGTCCAGTAGT+TGG + chr1.3:72431974-72431993 None:intergenic 45.0%
TGCTGATAGGCTTGTAATCC+AGG - chr1.3:72432136-72432155 MS.gene91355:CDS 45.0%
! CACTTGCAAGTTGCTTTCGT+TGG + chr1.3:72431700-72431719 None:intergenic 45.0%
! CTTGTGGAGGATTTGGTTGA+TGG + chr1.3:72432226-72432245 None:intergenic 45.0%
! TCCCGTTGATGGGATGAATA+GGG - chr1.3:72432055-72432074 MS.gene91355:CDS 45.0%
! TCTCAATCTTTTGGCGACCT+CGG + chr1.3:72431665-72431684 None:intergenic 45.0%
!! CTCTCGTTGTTTTCTCACCT+GGG - chr1.3:72431793-72431812 MS.gene91355:CDS 45.0%
!! GACCGAAGCTCAATTTTGGT+GGG - chr1.3:72432028-72432047 MS.gene91355:CDS 45.0%
!! TCTCGTTGTTTTCTCACCTG+GGG - chr1.3:72431794-72431813 MS.gene91355:CDS 45.0%
!!! ATGGTACCATTGTTTTGGGG+CGG + chr1.3:72431885-72431904 None:intergenic 45.0%
!!! GGGGAGAAGGTATTTTCGTT+TGG - chr1.3:72431813-72431832 MS.gene91355:CDS 45.0%
AGCAACATCTGCACCACAGA+GGG + chr1.3:72431775-72431794 None:intergenic 50.0%
GCCCTATTCATCCCATCAAC+GGG + chr1.3:72432059-72432078 None:intergenic 50.0%
GCTGGAAACATCTGAGCTTG+TGG + chr1.3:72432242-72432261 None:intergenic 50.0%
GGAAACATCTGAGCTTGTGG+AGG + chr1.3:72432239-72432258 None:intergenic 50.0%
GGCCCTATTCATCCCATCAA+CGG + chr1.3:72432060-72432079 None:intergenic 50.0%
GGTTTCAACAATATGGGGGG+AGG - chr1.3:72432302-72432321 MS.gene91355:CDS 50.0%
TGACCGTATCAACATTGGGG+TGG + chr1.3:72431839-72431858 None:intergenic 50.0%
TGGCCACCCCAATGTTGATA+CGG - chr1.3:72431833-72431852 MS.gene91355:CDS 50.0%
TTCAACAATATGGGGGGAGG+AGG - chr1.3:72432305-72432324 MS.gene91355:CDS 50.0%
! AGGCGACCGAAGCTCAATTT+TGG - chr1.3:72432024-72432043 MS.gene91355:CDS 50.0%
! AGTATTGAGCTCGCGCACAT+TGG + chr1.3:72431934-72431953 None:intergenic 50.0%
! CGACCGAAGCTCAATTTTGG+TGG - chr1.3:72432027-72432046 MS.gene91355:CDS 50.0%
! GTCCCGTTGATGGGATGAAT+AGG - chr1.3:72432054-72432073 MS.gene91355:CDS 50.0%
! TGTTTTCTCACCTGGGGAGA+AGG - chr1.3:72431800-72431819 MS.gene91355:CDS 50.0%
!! GAAGCTCAATTTTGGTGGGC+TGG - chr1.3:72432032-72432051 MS.gene91355:CDS 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG - chr1.3:72431792-72431811 MS.gene91355:CDS 50.0%
!! GGATTTGGTTGATGGTGGAG+AGG + chr1.3:72432218-72432237 None:intergenic 50.0%
!! GTGGAGGATTTGGTTGATGG+TGG + chr1.3:72432223-72432242 None:intergenic 50.0%
!!! TGGTACCATTGTTTTGGGGC+GGG + chr1.3:72431884-72431903 None:intergenic 50.0%
AACAATATGGGGGGAGGAGG+TGG - chr1.3:72432308-72432327 MS.gene91355:CDS 55.0%
AGAGCTAAGCGACTTGCGCA+AGG - chr1.3:72432004-72432023 MS.gene91355:CDS 55.0%
AGTGAGCTTTGCACCCTCTG+TGG - chr1.3:72431759-72431778 MS.gene91355:CDS 55.0%
GAGCAACATCTGCACCACAG+AGG + chr1.3:72431776-72431795 None:intergenic 55.0%
TCGAGTGGAAGGAAAAGCCG+AGG - chr1.3:72431645-72431664 MS.gene91355:CDS 55.0%
! ACAGAGGGTGCAAAGCTCAC+TGG + chr1.3:72431760-72431779 None:intergenic 55.0%
! ATGGTGGAGAGGCATGTTCG+AGG + chr1.3:72432207-72432226 None:intergenic 55.0%
! TGGTGGAGAGGCATGTTCGA+GGG + chr1.3:72432206-72432225 None:intergenic 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - chr1.3:72431720-72431739 MS.gene91355:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - chr1.3:72431721-72431740 MS.gene91355:CDS 55.0%
!! TGGTTTGAGTAGGAGCACCC+TGG + chr1.3:72432157-72432176 None:intergenic 55.0%
ATGGGGGGAGGAGGTGGATA+TGG - chr1.3:72432314-72432333 MS.gene91355:CDS 60.0%
CGAGTCCCGCCCCAAAACAA+TGG - chr1.3:72431876-72431895 MS.gene91355:CDS 60.0%
GGAGGTGGATATGGTCCCTC+CGG - chr1.3:72432323-72432342 MS.gene91355:CDS 60.0%
!! GGTGGGCTGGTCCCGTTGAT+GGG - chr1.3:72432045-72432064 MS.gene91355:CDS 65.0%
!! TGGTGGGCTGGTCCCGTTGA+TGG - chr1.3:72432044-72432063 MS.gene91355:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 72431642 72432355 72431642 ID=MS.gene91355
chr1.3 mRNA 72431642 72432355 72431642 ID=MS.gene91355.t1;Parent=MS.gene91355
chr1.3 exon 72431642 72432355 72431642 ID=MS.gene91355.t1.exon1;Parent=MS.gene91355.t1
chr1.3 CDS 72431642 72432355 72431642 ID=cds.MS.gene91355.t1;Parent=MS.gene91355.t1
Gene Sequence

>MS.gene91355

ATGTCGAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAGATGAAAAAAATGACCAACGAAAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACCCTCTGTGGTGCAGATGTTGCTCTCGTTGTTTTCTCACCTGGGGAGAAGGTATTTTCGTTTGGCCACCCCAATGTTGATACGGTCATAGATCGTTATCTCTCTCGAGTCCCGCCCCAAAACAATGGTACCATGCAATTCATTGAGGCTCATCGCAGCGCCAATGTGCGCGAGCTCAATACTCAGCTGACTCAGATCAACCAACTACTGGACATCGAGAAGAAACGTGCTGAAGAGCTAAGCGACTTGCGCAAGGCGACCGAAGCTCAATTTTGGTGGGCTGGTCCCGTTGATGGGATGAATAGGGCCCAACTTGAATTATTCAAGAAGGCTTTGGATGAGCTTAAGAAACTTGTTGCTCATCATGCTGATAGGCTTGTAATCCAGGGTGCTCCTACTCAAACCATTCAGTTTTTTGTTGGAAACGGTTCACCCTCGAACATGCCTCTCCACCATCAACCAAATCCTCCACAAGCTCAGATGTTTCCAGCACAATTTTTTCAGAACCCTATGTTGCAACCTCATTTGTTTGGTTTCAACAATATGGGGGGAGGAGGTGGATATGGTCCCTCCGGATTCTTTTGA
Protein sequence

>MS.gene91355.t1

MSSGRKSRGRQKIEMKKMTNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSFGHPNVDTVIDRYLSRVPPQNNGTMQFIEAHRSANVRELNTQLTQINQLLDIEKKRAEELSDLRKATEAQFWWAGPVDGMNRAQLELFKKALDELKKLVAHHADRLVIQGAPTQTIQFFVGNGSPSNMPLHHQPNPPQAQMFPAQFFQNPMLQPHLFGFNNMGGGGGYGPSGFF