AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91357

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91357.t1 MTR_8g043650 91.139 237 21 0 1 237 1 237 3.08e-161 446
MS.gene91357.t1 MTR_1g105910 94.643 224 12 0 1 224 1 224 2.10e-159 441
MS.gene91357.t1 MTR_2g030740 87.764 237 29 0 1 237 1 237 6.97e-147 409
MS.gene91357.t1 MTR_1g105920 89.041 219 24 0 1 219 1 219 7.95e-147 409
MS.gene91357.t1 MTR_1g012570 88.186 237 28 0 1 237 1 237 9.16e-144 401
MS.gene91357.t1 MTR_3g052920 84.018 219 35 0 1 219 1 219 2.75e-140 392
MS.gene91357.t1 MTR_1g105905 84.091 220 35 0 18 237 1 220 1.31e-137 385
MS.gene91357.t1 MTR_3g052870 78.539 219 28 1 1 219 1 200 2.88e-121 344
MS.gene91357.t1 MTR_0121s0080 70.042 237 70 1 1 237 1 236 7.64e-118 336
MS.gene91357.t1 MTR_1g106070 86.264 182 25 0 1 182 1 182 6.44e-116 329
MS.gene91357.t1 MTR_3g030770 71.368 234 49 3 1 224 1 226 2.77e-114 327
MS.gene91357.t1 MTR_1g108510 71.368 234 49 3 1 224 1 226 1.84e-113 324
MS.gene91357.t1 MTR_5g055100 64.557 237 84 0 1 237 1 237 3.03e-113 324
MS.gene91357.t1 MTR_1g077360 67.556 225 73 0 1 225 1 225 2.23e-112 322
MS.gene91357.t1 MTR_2g093190 70.940 234 50 3 1 224 1 226 1.03e-111 320
MS.gene91357.t1 MTR_2g085280 64.407 236 84 0 1 236 1 236 1.76e-111 320
MS.gene91357.t1 MTR_2g085250 64.407 236 84 0 1 236 1 236 4.47e-111 318
MS.gene91357.t1 MTR_5g045560 67.932 237 76 0 1 237 1 237 6.97e-110 316
MS.gene91357.t1 MTR_1g075600 67.411 224 73 0 1 224 1 224 2.35e-109 314
MS.gene91357.t1 MTR_1g108580 72.685 216 51 1 1 216 1 208 2.90e-108 311
MS.gene91357.t1 MTR_5g053390 66.518 224 75 0 1 224 1 224 1.01e-107 310
MS.gene91357.t1 MTR_7g062350 64.574 223 77 2 16 237 27 248 9.00e-98 285
MS.gene91357.t1 MTR_1g075570 62.921 178 52 1 18 195 1 164 3.84e-70 212
MS.gene91357.t1 MTR_0121s0100 78.906 128 27 0 1 128 1 128 9.11e-69 207
MS.gene91357.t1 MTR_3g080940 52.778 180 84 1 7 186 7 185 6.93e-65 200
MS.gene91357.t1 MTR_3g030780 75.194 129 32 0 1 129 1 129 2.15e-64 196
MS.gene91357.t1 MTR_3g067910 67.647 102 33 0 21 122 2 103 1.76e-45 147
MS.gene91357.t1 MTR_2g105290 40.936 171 91 2 5 172 8 171 4.24e-41 139
MS.gene91357.t1 MTR_8g086290 42.169 166 86 2 5 167 8 166 9.93e-41 138
MS.gene91357.t1 MTR_7g028448 45.161 155 73 3 5 159 8 150 2.79e-35 124
MS.gene91357.t1 MTR_4g036915 45.161 155 73 3 5 159 8 150 2.79e-35 124
MS.gene91357.t1 MTR_4g127140 39.227 181 90 4 5 172 8 181 6.91e-32 115
MS.gene91357.t1 MTR_1g108500 63.918 97 14 1 22 118 110 185 6.23e-31 117
MS.gene91357.t1 MTR_3g067875 83.929 56 9 0 18 73 1 56 5.03e-28 102
MS.gene91357.t1 MTR_3g067870 69.841 63 19 0 16 78 83 145 6.07e-24 94.0
MS.gene91357.t1 MTR_3g067915 64.179 67 24 0 60 126 30 96 8.87e-24 91.7
MS.gene91357.t1 MTR_1g047550 60.870 69 27 0 9 77 2 70 1.63e-23 93.6
MS.gene91357.t1 MTR_8g079502 60.870 69 27 0 9 77 2 70 4.23e-23 92.4
MS.gene91357.t1 MTR_4g131030 40.517 116 54 3 9 109 2 117 1.47e-22 92.0
MS.gene91357.t1 MTR_8g051580 45.545 101 53 1 9 109 2 100 2.21e-22 90.5
MS.gene91357.t1 MTR_1g063160 45.536 112 56 3 9 118 2 110 2.27e-22 90.5
MS.gene91357.t1 MTR_1g054265 45.545 101 53 1 9 109 2 100 2.43e-22 90.1
MS.gene91357.t1 MTR_8g046350 38.462 130 72 2 9 135 2 126 2.99e-21 87.0
MS.gene91357.t1 MTR_4g094632 41.509 106 60 1 9 114 2 105 4.21e-20 84.0
MS.gene91357.t1 MTR_4g093970 33.526 173 88 4 10 161 29 195 3.85e-19 83.6
MS.gene91357.t1 MTR_1g053070 36.667 150 80 3 9 157 2 137 5.21e-19 83.2
MS.gene91357.t1 MTR_3g005530 52.941 68 32 0 9 76 2 69 9.95e-19 82.0
MS.gene91357.t1 MTR_3g452380 42.453 106 51 1 3 108 11 106 2.14e-18 81.6
MS.gene91357.t1 MTR_4g094638 41.509 106 61 1 9 113 2 107 2.98e-18 79.7
MS.gene91357.t1 MTR_4g102530 50.685 73 36 0 10 82 3 75 8.70e-18 79.0
MS.gene91357.t1 MTR_8g033270 33.533 167 97 4 9 167 2 162 1.60e-17 79.3
MS.gene91357.t1 MTR_5g066180 51.471 68 33 0 9 76 2 69 2.91e-17 78.2
MS.gene91357.t1 MTR_2g017865 30.270 185 100 4 9 167 17 198 4.41e-17 78.2
MS.gene91357.t1 MTR_3g102570 33.333 171 90 6 9 162 2 165 5.22e-17 79.0
MS.gene91357.t1 MTR_8g087860 51.471 68 33 0 9 76 18 85 7.54e-17 77.4
MS.gene91357.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 1.06e-16 75.9
MS.gene91357.t1 MTR_6g464720 49.275 69 34 1 9 76 2 70 1.30e-16 76.6
MS.gene91357.t1 MTR_4g109830 47.826 69 35 1 9 76 2 70 2.10e-16 75.9
MS.gene91357.t1 MTR_8g022970 32.911 158 93 3 8 159 17 167 2.11e-16 75.1
MS.gene91357.t1 MTR_5g032150 29.384 211 130 6 9 201 2 211 2.18e-16 75.9
MS.gene91357.t1 MTR_5g032520 34.815 135 72 4 9 131 2 132 2.45e-16 75.5
MS.gene91357.t1 MTR_7g075870 38.182 110 66 1 10 119 3 110 3.19e-16 75.1
MS.gene91357.t1 MTR_8g033220 47.436 78 41 0 10 87 3 80 3.50e-16 75.1
MS.gene91357.t1 MTR_8g033220 47.436 78 41 0 10 87 3 80 3.82e-16 75.1
MS.gene91357.t1 MTR_2g009890 48.529 68 35 0 9 76 2 69 5.30e-16 75.5
MS.gene91357.t1 MTR_4g084740 47.368 76 38 2 9 83 2 76 7.91e-16 75.9
MS.gene91357.t1 MTR_0003s0590 51.471 68 33 0 9 76 2 69 1.16e-15 74.3
MS.gene91357.t1 MTR_6g015975 49.275 69 34 1 9 76 2 70 1.73e-15 73.6
MS.gene91357.t1 MTR_7g016600 49.275 69 34 1 9 76 2 70 2.06e-15 73.6
MS.gene91357.t1 MTR_8g066260 40.964 83 46 1 9 91 2 81 2.34e-15 73.2
MS.gene91357.t1 MTR_5g021270 50.000 70 33 1 9 76 2 71 2.64e-15 72.8
MS.gene91357.t1 MTR_5g021270 50.000 70 33 1 9 76 2 71 2.65e-15 72.8
MS.gene91357.t1 MTR_3g437790 33.566 143 78 4 26 159 30 164 3.53e-15 71.6
MS.gene91357.t1 MTR_2g461710 55.357 56 25 0 9 64 2 57 3.59e-15 68.2
MS.gene91357.t1 MTR_5g046790 45.070 71 36 1 9 79 2 69 3.75e-15 72.0
MS.gene91357.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 4.03e-15 72.4
MS.gene91357.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 4.72e-15 72.4
MS.gene91357.t1 MTR_7g075870 37.838 111 66 2 10 119 3 111 6.51e-15 71.6
MS.gene91357.t1 MTR_5g046870 47.826 69 35 1 9 76 2 70 8.01e-15 68.9
MS.gene91357.t1 MTR_3g088615 44.286 70 37 1 9 76 2 71 2.36e-14 69.3
MS.gene91357.t1 MTR_7g016630 43.478 69 38 1 9 76 2 70 3.62e-14 70.1
MS.gene91357.t1 MTR_1g029670 46.970 66 34 1 9 74 2 66 3.98e-14 68.6
MS.gene91357.t1 MTR_1g038300 47.143 70 35 1 9 76 2 71 4.74e-14 69.3
MS.gene91357.t1 MTR_7g075850 45.714 70 36 1 9 76 2 71 8.00e-14 68.9
MS.gene91357.t1 MTR_3g084980 55.357 56 25 0 9 64 2 57 1.01e-13 68.6
MS.gene91357.t1 MTR_8g097090 46.377 69 36 1 9 76 2 70 1.19e-13 68.6
MS.gene91357.t1 MTR_3g109930 30.714 140 81 3 27 159 20 150 1.27e-13 67.0
MS.gene91357.t1 MTR_4g109810 51.786 56 27 0 9 64 2 57 1.74e-13 68.2
MS.gene91357.t1 MTR_5g066960 49.123 57 29 0 9 65 2 58 2.15e-13 63.5
MS.gene91357.t1 MTR_3g113030 47.619 63 33 0 9 71 2 64 2.21e-13 67.4
MS.gene91357.t1 MTR_4g051538 32.099 162 98 3 1 162 1 150 1.18e-12 65.5
MS.gene91357.t1 MTR_4g093030 41.892 74 43 0 9 82 2 75 1.48e-12 63.9
MS.gene91357.t1 MTR_4g108720 26.738 187 115 7 9 183 2 178 1.06e-11 63.9
MS.gene91357.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 1.98e-11 61.2
MS.gene91357.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 1.98e-11 61.6
MS.gene91357.t1 MTR_2g045020 31.875 160 81 7 7 156 21 162 2.13e-11 61.2
MS.gene91357.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 2.42e-11 61.2
MS.gene91357.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 2.60e-11 61.2
MS.gene91357.t1 MTR_1g041615 34.513 113 64 2 20 132 17 119 8.90e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91357.t1 AT5G60440 47.131 244 112 5 5 233 3 244 1.47e-61 195
MS.gene91357.t1 AT2G24840 49.693 163 71 4 6 162 60 217 5.01e-44 149
MS.gene91357.t1 AT1G01530 40.952 210 101 4 4 192 2 209 5.70e-41 140
MS.gene91357.t1 AT1G65360 39.683 189 107 3 5 192 3 185 9.29e-40 137
MS.gene91357.t1 AT4G36590 38.197 233 127 6 5 226 3 229 8.39e-39 135
MS.gene91357.t1 AT2G34440 45.299 117 55 2 9 121 2 113 9.36e-27 102
MS.gene91357.t1 AT3G66656 41.985 131 71 2 9 134 2 132 9.35e-26 99.4
MS.gene91357.t1 AT3G04100 31.579 152 100 2 2 149 7 158 8.93e-25 97.8
MS.gene91357.t1 AT1G72350 35.374 147 62 3 9 155 43 156 6.39e-23 93.2
MS.gene91357.t1 AT1G28460 30.636 173 110 3 5 174 4 169 3.07e-20 85.1
MS.gene91357.t1 AT4G22950 49.351 77 39 0 10 86 3 79 4.22e-19 82.0
MS.gene91357.t1 AT4G09960 46.512 86 45 1 9 93 2 87 5.98e-19 82.4
MS.gene91357.t1 AT4G09960 46.512 86 45 1 9 93 2 87 7.52e-19 82.4
MS.gene91357.t1 AT4G09960 46.512 86 45 1 9 93 3 88 7.65e-19 82.4
MS.gene91357.t1 AT1G29962 29.651 172 114 4 5 169 4 175 8.53e-19 81.3
MS.gene91357.t1 AT4G09960 46.512 86 45 1 9 93 12 97 1.12e-18 82.4
MS.gene91357.t1 AT4G09960 46.512 86 45 1 9 93 28 113 1.53e-18 82.0
MS.gene91357.t1 AT2G45660 52.941 68 32 0 10 77 3 70 1.73e-18 79.7
MS.gene91357.t1 AT2G45650 52.941 68 32 0 9 76 2 69 1.84e-18 82.0
MS.gene91357.t1 AT4G22950 50.000 76 38 0 10 85 3 78 2.28e-18 80.9
MS.gene91357.t1 AT4G22950 50.000 76 38 0 10 85 3 78 2.28e-18 80.9
MS.gene91357.t1 AT2G45660 43.689 103 51 3 10 106 3 104 4.36e-18 80.1
MS.gene91357.t1 AT4G09960 46.512 86 45 1 9 93 97 182 4.81e-18 82.0
MS.gene91357.t1 AT4G18960 27.869 244 138 8 5 226 15 242 9.81e-18 80.1
MS.gene91357.t1 AT2G22540 38.406 138 65 5 9 132 2 133 2.68e-17 78.6
MS.gene91357.t1 AT2G22540 38.406 138 65 5 9 132 2 133 2.68e-17 78.6
MS.gene91357.t1 AT5G51870 53.731 67 31 0 10 76 3 69 3.64e-17 76.6
MS.gene91357.t1 AT4G24540 36.486 148 77 5 9 156 2 132 3.92e-17 77.8
MS.gene91357.t1 AT5G51870 53.731 67 31 0 10 76 3 69 4.09e-17 77.4
MS.gene91357.t1 AT3G57230 47.059 68 36 0 9 76 2 69 5.84e-17 75.5
MS.gene91357.t1 AT2G42830 47.368 76 40 0 1 76 9 84 8.22e-17 77.4
MS.gene91357.t1 AT5G51870 50.000 72 36 0 5 76 21 92 8.66e-17 76.3
MS.gene91357.t1 AT1G22130 36.441 118 73 2 9 125 2 118 9.42e-17 78.6
MS.gene91357.t1 AT2G42830 47.368 76 40 0 1 76 9 84 9.47e-17 77.0
MS.gene91357.t1 AT5G51870 53.731 67 31 0 10 76 3 69 1.03e-16 76.6
MS.gene91357.t1 AT3G58780 50.704 71 35 0 6 76 14 84 1.06e-16 77.0
MS.gene91357.t1 AT3G58780 50.704 71 35 0 6 76 20 90 1.09e-16 77.0
MS.gene91357.t1 AT5G51870 53.731 67 31 0 10 76 13 79 1.22e-16 76.6
MS.gene91357.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.22e-16 75.1
MS.gene91357.t1 AT3G61120 51.471 68 33 0 9 76 2 69 1.22e-16 76.6
MS.gene91357.t1 AT3G57390 50.000 68 34 0 9 76 2 69 1.35e-16 76.3
MS.gene91357.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.37e-16 76.3
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.37e-16 73.6
MS.gene91357.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.55e-16 76.3
MS.gene91357.t1 AT1G77980 38.095 105 64 1 9 112 2 106 1.60e-16 77.8
MS.gene91357.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.61e-16 75.1
MS.gene91357.t1 AT1G77950 47.368 76 38 2 9 83 2 76 1.75e-16 76.6
MS.gene91357.t1 AT1G77950 47.368 76 38 2 9 83 2 76 1.75e-16 76.6
MS.gene91357.t1 AT1G77950 47.368 76 38 2 9 83 2 76 1.75e-16 76.6
MS.gene91357.t1 AT1G77950 47.368 76 38 2 9 83 2 76 1.75e-16 76.6
MS.gene91357.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.95e-16 75.1
MS.gene91357.t1 AT5G10140 50.725 69 33 1 9 76 2 70 2.07e-16 75.1
MS.gene91357.t1 AT3G58780 50.704 71 35 0 6 76 14 84 2.14e-16 76.6
MS.gene91357.t1 AT3G57230 47.059 68 36 0 9 76 2 69 2.16e-16 76.3
MS.gene91357.t1 AT3G57230 47.059 68 36 0 9 76 2 69 2.16e-16 76.3
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.34e-16 74.3
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.34e-16 74.3
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.34e-16 74.3
MS.gene91357.t1 AT5G10140 50.725 69 33 1 9 76 2 70 2.35e-16 74.7
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.37e-16 73.9
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.37e-16 73.9
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.37e-16 73.9
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.37e-16 73.9
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.37e-16 73.9
MS.gene91357.t1 AT3G54340 30.128 156 85 3 9 162 2 135 2.72e-16 75.5
MS.gene91357.t1 AT5G13790 43.011 93 44 1 9 101 2 85 3.09e-16 76.3
MS.gene91357.t1 AT3G57390 50.000 68 34 0 9 76 2 69 3.23e-16 75.9
MS.gene91357.t1 AT5G13790 51.471 68 33 0 9 76 2 69 3.75e-16 75.9
MS.gene91357.t1 AT4G11880 48.611 72 36 1 10 80 3 74 4.95e-16 73.9
MS.gene91357.t1 AT4G11880 48.611 72 36 1 10 80 3 74 4.95e-16 73.9
MS.gene91357.t1 AT2G22630 47.059 68 36 0 9 76 2 69 6.03e-16 74.7
MS.gene91357.t1 AT2G22630 47.059 68 36 0 9 76 2 69 6.03e-16 74.7
MS.gene91357.t1 AT1G69120 41.111 90 50 1 9 98 2 88 6.14e-16 74.7
MS.gene91357.t1 AT1G28450 29.371 143 95 3 5 141 4 146 7.00e-16 73.6
MS.gene91357.t1 AT5G51860 52.239 67 32 0 10 76 3 69 8.11e-16 73.9
MS.gene91357.t1 AT5G60910 49.296 71 33 1 9 79 2 69 8.74e-16 74.3
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.05e-15 73.2
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.05e-15 73.2
MS.gene91357.t1 AT5G51860 52.239 67 32 0 10 76 3 69 1.06e-15 73.6
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.22e-15 73.6
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.22e-15 73.6
MS.gene91357.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.22e-15 73.6
MS.gene91357.t1 AT4G11880 48.611 72 36 1 10 80 3 74 1.25e-15 73.6
MS.gene91357.t1 AT4G11880 48.611 72 36 1 10 80 3 74 1.25e-15 73.6
MS.gene91357.t1 AT1G69120 41.111 90 50 1 9 98 2 88 1.38e-15 74.3
MS.gene91357.t1 AT1G26310 47.826 69 35 1 9 76 2 70 1.58e-15 73.9
MS.gene91357.t1 AT3G30260 46.377 69 36 1 9 76 2 70 2.10e-15 73.6
MS.gene91357.t1 AT5G23260 44.330 97 46 3 2 90 9 105 2.73e-15 73.6
MS.gene91357.t1 AT5G23260 44.330 97 46 3 2 90 9 105 2.98e-15 73.6
MS.gene91357.t1 AT5G20240 47.143 70 35 1 9 76 2 71 3.50e-15 70.9
MS.gene91357.t1 AT5G15800 49.275 69 34 1 9 76 2 70 4.22e-15 72.8
MS.gene91357.t1 AT5G23260 45.455 88 42 2 9 90 2 89 5.34e-15 72.4
MS.gene91357.t1 AT5G23260 45.455 88 42 2 9 90 2 89 5.45e-15 72.4
MS.gene91357.t1 AT5G20240 47.143 70 35 1 9 76 2 71 6.60e-15 71.2
MS.gene91357.t1 AT2G22540 37.681 138 61 6 9 132 2 128 6.65e-15 72.0
MS.gene91357.t1 AT5G15800 49.275 69 34 1 9 76 2 70 6.89e-15 72.4
MS.gene91357.t1 AT1G17310 51.899 79 36 1 8 86 47 123 8.13e-15 71.2
MS.gene91357.t1 AT1G17310 51.899 79 36 1 8 86 58 134 1.13e-14 71.2
MS.gene91357.t1 AT2G14210 46.377 69 36 1 9 76 2 70 1.21e-14 71.2
MS.gene91357.t1 AT2G14210 46.377 69 36 1 9 76 2 70 1.56e-14 70.9
MS.gene91357.t1 AT5G65050 28.646 192 120 9 9 193 2 183 1.68e-14 69.7
MS.gene91357.t1 AT3G58780 53.333 60 28 0 6 65 14 73 2.59e-14 70.5
MS.gene91357.t1 AT3G02310 47.826 69 35 1 9 76 2 70 2.96e-14 69.3
MS.gene91357.t1 AT5G65050 46.377 69 36 1 9 76 2 70 3.02e-14 68.9
MS.gene91357.t1 AT5G65050 29.897 194 112 7 9 193 2 180 3.16e-14 68.9
MS.gene91357.t1 AT3G58780 53.333 60 28 0 6 65 14 73 3.54e-14 70.5
MS.gene91357.t1 AT2G03710 47.143 70 35 2 9 76 2 71 5.00e-14 68.6
MS.gene91357.t1 AT5G65050 46.377 69 36 1 9 76 2 70 5.46e-14 68.6
MS.gene91357.t1 AT1G24260 41.237 97 54 1 9 105 2 95 5.81e-14 69.3
MS.gene91357.t1 AT3G02310 47.826 69 35 1 9 76 2 70 7.15e-14 69.3
MS.gene91357.t1 AT1G24260 41.237 97 54 1 9 105 2 95 7.38e-14 69.3
MS.gene91357.t1 AT2G03710 47.143 70 35 2 9 76 2 71 9.49e-14 68.9
MS.gene91357.t1 AT2G03710 47.143 70 35 2 9 76 2 71 1.01e-13 68.9
MS.gene91357.t1 AT5G65060 46.377 69 36 1 9 76 2 70 1.05e-13 67.8
MS.gene91357.t1 AT5G65060 46.377 69 36 1 9 76 2 70 1.09e-13 67.8
MS.gene91357.t1 AT1G47760 34.127 126 66 4 9 131 2 113 1.23e-13 67.4
MS.gene91357.t1 AT5G65060 46.377 69 36 1 9 76 2 70 1.31e-13 67.8
MS.gene91357.t1 AT1G24260 53.571 56 26 0 9 64 2 57 1.43e-13 68.6
MS.gene91357.t1 AT1G71692 44.286 70 38 1 9 77 2 71 1.63e-13 67.8
MS.gene91357.t1 AT5G65070 42.029 69 39 1 9 76 2 70 4.88e-13 65.1
MS.gene91357.t1 AT5G65070 42.029 69 39 1 9 76 2 70 9.60e-13 65.5
MS.gene91357.t1 AT5G65070 42.029 69 39 1 9 76 2 70 1.77e-12 64.7
MS.gene91357.t1 AT5G65070 42.029 69 39 1 9 76 2 70 1.88e-12 65.1
MS.gene91357.t1 AT5G65070 47.368 57 30 0 9 65 2 58 8.99e-12 63.2
MS.gene91357.t1 AT1G18750 25.806 186 119 6 9 177 2 185 1.87e-11 63.5
MS.gene91357.t1 AT1G69540 32.727 110 66 3 9 117 2 104 1.94e-11 63.2
MS.gene91357.t1 AT4G37435 40.278 72 42 1 9 79 2 73 2.03e-11 61.2
MS.gene91357.t1 AT1G18750 25.806 186 119 6 9 177 2 185 2.17e-11 63.2
MS.gene91357.t1 AT1G69540 32.727 110 66 3 9 117 2 104 2.26e-11 63.2
MS.gene91357.t1 AT1G18750 37.333 75 45 1 9 81 2 76 5.28e-11 62.0
MS.gene91357.t1 AT2G26320 40.000 70 40 1 9 76 18 87 5.49e-11 58.5
MS.gene91357.t1 AT2G03060 39.286 84 48 3 9 90 2 84 8.04e-11 61.6
MS.gene91357.t1 AT5G65080 42.029 69 39 1 9 76 9 77 8.37e-11 59.7
MS.gene91357.t1 AT2G03060 39.286 84 48 3 9 90 2 84 8.50e-11 61.6
MS.gene91357.t1 AT2G03060 39.286 84 48 3 9 90 2 84 8.50e-11 61.6
MS.gene91357.t1 AT2G03060 39.286 84 48 3 9 90 2 84 8.50e-11 61.6

Find 54 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGGGCTGGTCCCGTTGA+TGG 0.303436 1.3:-72417898 MS.gene91357:CDS
ATTGCATGGTACCATTGTTT+TGG 0.337688 1.3:+72418055 None:intergenic
ATGTTTCAACCTCACTTGTT+TGG 0.359051 1.3:-72417661 MS.gene91357:CDS
GAGGAGACTAAGAAACTTGT+TGG 0.386198 1.3:-72417835 MS.gene91357:CDS
TGCCGATAGGCTTGTAATCC+AGG 0.392094 1.3:-72417806 MS.gene91357:CDS
GGGCTCAGATCAAAAGAATC+TGG 0.407516 1.3:+72417600 None:intergenic
TCTTCTCCATGTCCAGTAGC+TGG 0.428165 1.3:+72417971 None:intergenic
CTTGTTTGGCTTCAACAATA+CGG 0.429938 1.3:-72417647 MS.gene91357:CDS
GTCCCGTTGATGGGATGAAT+AGG 0.432754 1.3:-72417888 MS.gene91357:CDS
GCGGAGGATTTCGCTGATGA+TGG 0.435525 1.3:+72417722 None:intergenic
GGTGGGCTGGTCCCGTTGAT+GGG 0.452333 1.3:-72417897 MS.gene91357:CDS
TCCCGTTGATGGGATGAATA+GGG 0.453040 1.3:-72417887 MS.gene91357:CDS
AGGCGACCGAGAGTCAGTTT+TGG 0.458130 1.3:-72417918 MS.gene91357:CDS
TTGTTTGGCTTCAACAATAC+GGG 0.463078 1.3:-72417646 MS.gene91357:CDS
GCCCTATTCATCCCATCAAC+GGG 0.481029 1.3:+72417886 None:intergenic
GCAGAGCGTGCAAAGCTCAC+TGG 0.483763 1.3:+72418185 None:intergenic
AGTATTGAGCTCGCGCACAT+TGG 0.504609 1.3:+72418011 None:intergenic
GACTCAAATCAACCAGCTAC+TGG 0.506083 1.3:-72417983 MS.gene91357:CDS
CACTTGCAAGTTGCTCTCGT+TGG 0.508443 1.3:+72418245 None:intergenic
GTCTATGACCGTATCAACAT+TGG 0.509296 1.3:+72418101 None:intergenic
GTTGCAAACATTTGAGTTTG+CGG 0.514698 1.3:+72417703 None:intergenic
GGCCCTATTCATCCCATCAA+CGG 0.536262 1.3:+72417885 None:intergenic
TCTATGACCGTATCAACATT+GGG 0.542196 1.3:+72418102 None:intergenic
TGGCCAACCCAATGTTGATA+CGG 0.545005 1.3:-72418109 MS.gene91357:CDS
GCTCGCGCACATTGGCGCTA+CGG 0.552531 1.3:+72418019 None:intergenic
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 1.3:-72418221 MS.gene91357:CDS
CTTCAACCATGTCGAGTGGA+AGG 0.555433 1.3:-72418308 None:intergenic
GTGGGACTCGAGAGAGATAA+CGG 0.555728 1.3:+72418079 None:intergenic
AGTGAGCTTTGCACGCTCTG+CGG 0.563441 1.3:-72418183 MS.gene91357:CDS
AGCCCACCAAAACTGACTCT+CGG 0.565176 1.3:+72417912 None:intergenic
AACAAGTGAGGTTGAAACAT+AGG 0.568477 1.3:+72417664 None:intergenic
AATCAACCAGCTACTGGACA+TGG 0.571929 1.3:-72417977 MS.gene91357:CDS
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 1.3:-72418222 MS.gene91357:CDS
AATGAAAATACCTTCTCCCC+AGG 0.587583 1.3:+72418132 None:intergenic
AGAGCTGAGCAACTTGCGCA+AGG 0.589828 1.3:-72417938 MS.gene91357:CDS
GCCGATAGGCTTGTAATCCA+GGG 0.597733 1.3:-72417805 MS.gene91357:CDS
TTGTTGGACATCATGCCGAT+AGG 0.598515 1.3:-72417819 MS.gene91357:CDS
TGACCGTATCAACATTGGGT+TGG 0.600758 1.3:+72418106 None:intergenic
AGGTTTGAGTAGGAGCACCC+TGG 0.605264 1.3:+72417788 None:intergenic
ACCCTGGATTACAAGCCTAT+CGG 0.607186 1.3:+72417804 None:intergenic
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 1.3:+72418208 None:intergenic
TGTTTGGCTTCAACAATACG+GGG 0.616084 1.3:-72417645 MS.gene91357:CDS
TGAGCTTCAACCATGTCGAG+TGG 0.632070 1.3:-72418312 None:intergenic
GGATTTCGCTGATGATGGAG+AGG 0.633183 1.3:+72417727 None:intergenic
CTCAGATCAAAAGAATCTGG+AGG 0.633945 1.3:+72417603 None:intergenic
TGGTACCATGCAATTCATTG+AGG 0.638950 1.3:-72418046 MS.gene91357:CDS
CGAGTCCCACCCCAAAACAA+TGG 0.639467 1.3:-72418066 MS.gene91357:CDS
GTGAGCCTCAATGAATTGCA+TGG 0.640763 1.3:+72418041 None:intergenic
GCAAACATTTGAGTTTGCGG+AGG 0.647148 1.3:+72417706 None:intergenic
TTGTTGAAGCCAAACAAGTG+AGG 0.651690 1.3:+72417652 None:intergenic
TCAGATCAAAAGAATCTGGA+GGG 0.666536 1.3:+72417604 None:intergenic
TTTGGCTTCAACAATACGGG+GGG 0.687957 1.3:-72417643 MS.gene91357:CDS
TCGAGTGGAAGGAAAAGCCG+AGG 0.691796 1.3:-72418297 MS.gene91357:CDS
GTTTGGCTTCAACAATACGG+GGG 0.701007 1.3:-72417644 MS.gene91357:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGAAAAATTCAAGTT+GGG + chr1.3:72418048-72418067 None:intergenic 20.0%
!!! TTTTTTTCATCTCAATCTTT+TGG + chr1.3:72417641-72417660 None:intergenic 20.0%
! AAAAATTGAAAGGTTTGAGT+AGG + chr1.3:72418134-72418153 None:intergenic 25.0%
! ATTTCCACCAAAAAATTGAA+AGG + chr1.3:72418144-72418163 None:intergenic 25.0%
!!! ACTCAAACCTTTCAATTTTT+TGG - chr1.3:72418134-72418153 MS.gene91357:CDS 25.0%
!!! CCAACTTGAATTTTTCAAAA+AGG - chr1.3:72418046-72418065 MS.gene91357:CDS 25.0%
!!! CCTTTTTGAAAAATTCAAGT+TGG + chr1.3:72418049-72418068 None:intergenic 25.0%
!!! TGAATTTTTCAAAAAGGCTT+TGG - chr1.3:72418052-72418071 MS.gene91357:CDS 25.0%
!!! TTTCAATTTTTTGGTGGAAA+TGG - chr1.3:72418143-72418162 MS.gene91357:CDS 25.0%
!! ATTTTTCAAAAAGGCTTTGG+AGG - chr1.3:72418055-72418074 MS.gene91357:CDS 30.0%
!!! CAAACCTTTCAATTTTTTGG+TGG - chr1.3:72418137-72418156 MS.gene91357:CDS 30.0%
AACAAGTGAGGTTGAAACAT+AGG + chr1.3:72418248-72418267 None:intergenic 35.0%
ATGTTTCAACCTCACTTGTT+TGG - chr1.3:72418248-72418267 MS.gene91357:CDS 35.0%
TCTATGACCGTATCAACATT+GGG + chr1.3:72417810-72417829 None:intergenic 35.0%
! ATTGCATGGTACCATTGTTT+TGG + chr1.3:72417857-72417876 None:intergenic 35.0%
! CTTGTTTGGCTTCAACAATA+CGG - chr1.3:72418262-72418281 MS.gene91357:CDS 35.0%
! GTTGCAAACATTTGAGTTTG+CGG + chr1.3:72418209-72418228 None:intergenic 35.0%
! TTGCATGGTACCATTGTTTT+GGG + chr1.3:72417856-72417875 None:intergenic 35.0%
! TTGTTTGGCTTCAACAATAC+GGG - chr1.3:72418263-72418282 MS.gene91357:CDS 35.0%
AATGAAAATACCTTCTCCCC+AGG + chr1.3:72417780-72417799 None:intergenic 40.0%
GAGGAGACTAAGAAACTTGT+TGG - chr1.3:72418074-72418093 MS.gene91357:CDS 40.0%
GTCTATGACCGTATCAACAT+TGG + chr1.3:72417811-72417830 None:intergenic 40.0%
TGGTACCATGCAATTCATTG+AGG - chr1.3:72417863-72417882 MS.gene91357:CDS 40.0%
TTGTTGAAGCCAAACAAGTG+AGG + chr1.3:72418260-72418279 None:intergenic 40.0%
! TGTTTGGCTTCAACAATACG+GGG - chr1.3:72418264-72418283 MS.gene91357:CDS 40.0%
!! TGCATGGTACCATTGTTTTG+GGG + chr1.3:72417855-72417874 None:intergenic 40.0%
!!! GGGGAGAAGGTATTTTCATT+TGG - chr1.3:72417780-72417799 MS.gene91357:CDS 40.0%
AATCAACCAGCTACTGGACA+TGG - chr1.3:72417932-72417951 MS.gene91357:CDS 45.0%
ACCCTGGATTACAAGCCTAT+CGG + chr1.3:72418108-72418127 None:intergenic 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + chr1.3:72417704-72417723 None:intergenic 45.0%
GACTCAAATCAACCAGCTAC+TGG - chr1.3:72417926-72417945 MS.gene91357:CDS 45.0%
GTGAGCCTCAATGAATTGCA+TGG + chr1.3:72417871-72417890 None:intergenic 45.0%
TGACCGTATCAACATTGGGT+TGG + chr1.3:72417806-72417825 None:intergenic 45.0%
TGGCCAACCCAATGTTGATA+CGG - chr1.3:72417800-72417819 MS.gene91357:CDS 45.0%
TTGTTGGACATCATGCCGAT+AGG - chr1.3:72418090-72418109 MS.gene91357:CDS 45.0%
! GCAAACATTTGAGTTTGCGG+AGG + chr1.3:72418206-72418225 None:intergenic 45.0%
! GTTTGGCTTCAACAATACGG+GGG - chr1.3:72418265-72418284 MS.gene91357:CDS 45.0%
! TCCCGTTGATGGGATGAATA+GGG - chr1.3:72418022-72418041 MS.gene91357:CDS 45.0%
! TCTCAATCTTTTGGCGACCT+CGG + chr1.3:72417632-72417651 None:intergenic 45.0%
! TTTGGCTTCAACAATACGGG+GGG - chr1.3:72418266-72418285 MS.gene91357:CDS 45.0%
!! CTCTCGTTGTTTTCTCACCT+GGG - chr1.3:72417760-72417779 MS.gene91357:CDS 45.0%
!! TCTCGTTGTTTTCTCACCTG+GGG - chr1.3:72417761-72417780 MS.gene91357:CDS 45.0%
!!! ATGGTACCATTGTTTTGGGG+TGG + chr1.3:72417852-72417871 None:intergenic 45.0%
!!! TGGTACCATTGTTTTGGGGT+GGG + chr1.3:72417851-72417870 None:intergenic 45.0%
CACTTGCAAGTTGCTCTCGT+TGG + chr1.3:72417667-72417686 None:intergenic 50.0%
GCCCTATTCATCCCATCAAC+GGG + chr1.3:72418026-72418045 None:intergenic 50.0%
GCCGATAGGCTTGTAATCCA+GGG - chr1.3:72418104-72418123 MS.gene91357:CDS 50.0%
GGCCCTATTCATCCCATCAA+CGG + chr1.3:72418027-72418046 None:intergenic 50.0%
GTGGGACTCGAGAGAGATAA+CGG + chr1.3:72417833-72417852 None:intergenic 50.0%
TCTTCTCCATGTCCAGTAGC+TGG + chr1.3:72417941-72417960 None:intergenic 50.0%
TGCCGATAGGCTTGTAATCC+AGG - chr1.3:72418103-72418122 MS.gene91357:CDS 50.0%
! AGCCCACCAAAACTGACTCT+CGG + chr1.3:72418000-72418019 None:intergenic 50.0%
! AGTATTGAGCTCGCGCACAT+TGG + chr1.3:72417901-72417920 None:intergenic 50.0%
! GTCCCGTTGATGGGATGAAT+AGG - chr1.3:72418021-72418040 MS.gene91357:CDS 50.0%
! TGTTTTCTCACCTGGGGAGA+AGG - chr1.3:72417767-72417786 MS.gene91357:CDS 50.0%
!! GACCGAGAGTCAGTTTTGGT+GGG - chr1.3:72417995-72418014 MS.gene91357:CDS 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG - chr1.3:72417759-72417778 MS.gene91357:CDS 50.0%
!! GGATTTCGCTGATGATGGAG+AGG + chr1.3:72418185-72418204 None:intergenic 50.0%
AGAGCTGAGCAACTTGCGCA+AGG - chr1.3:72417971-72417990 MS.gene91357:CDS 55.0%
AGTGAGCTTTGCACGCTCTG+CGG - chr1.3:72417726-72417745 MS.gene91357:CDS 55.0%
CGAGTCCCACCCCAAAACAA+TGG - chr1.3:72417843-72417862 MS.gene91357:CDS 55.0%
CTTCAACAATACGGGGGGAG+GGG - chr1.3:72418271-72418290 MS.gene91357:CDS 55.0%
GCGGAGGATTTCGCTGATGA+TGG + chr1.3:72418190-72418209 None:intergenic 55.0%
GCTTCAACAATACGGGGGGA+GGG - chr1.3:72418270-72418289 MS.gene91357:CDS 55.0%
TCGAGTGGAAGGAAAAGCCG+AGG - chr1.3:72417612-72417631 MS.gene91357:CDS 55.0%
TTCAACAATACGGGGGGAGG+GGG - chr1.3:72418272-72418291 MS.gene91357:CDS 55.0%
! AGGCGACCGAGAGTCAGTTT+TGG - chr1.3:72417991-72418010 MS.gene91357:CDS 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - chr1.3:72417687-72417706 MS.gene91357:CDS 55.0%
!! AGGTTTGAGTAGGAGCACCC+TGG + chr1.3:72418124-72418143 None:intergenic 55.0%
!! CGACCGAGAGTCAGTTTTGG+TGG - chr1.3:72417994-72418013 MS.gene91357:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - chr1.3:72417688-72417707 MS.gene91357:CDS 55.0%
!! GAGAGTCAGTTTTGGTGGGC+TGG - chr1.3:72417999-72418018 MS.gene91357:CDS 55.0%
GCAGAGCGTGCAAAGCTCAC+TGG + chr1.3:72417727-72417746 None:intergenic 60.0%
GGCTTCAACAATACGGGGGG+AGG - chr1.3:72418269-72418288 MS.gene91357:CDS 60.0%
AACAATACGGGGGGAGGGGG+TGG - chr1.3:72418275-72418294 MS.gene91357:CDS 65.0%
GCTCGCGCACATTGGCGCTA+CGG + chr1.3:72417893-72417912 None:intergenic 65.0%
!! GGTGGGCTGGTCCCGTTGAT+GGG - chr1.3:72418012-72418031 MS.gene91357:CDS 65.0%
!! TGGTGGGCTGGTCCCGTTGA+TGG - chr1.3:72418011-72418030 MS.gene91357:CDS 65.0%
ACGGGGGGAGGGGGTGGATA+TGG - chr1.3:72418281-72418300 MS.gene91357:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 72417609 72418322 72417609 ID=MS.gene91357
chr1.3 mRNA 72417609 72418322 72417609 ID=MS.gene91357.t1;Parent=MS.gene91357
chr1.3 exon 72417609 72418322 72417609 ID=MS.gene91357.t1.exon1;Parent=MS.gene91357.t1
chr1.3 CDS 72417609 72418322 72417609 ID=cds.MS.gene91357.t1;Parent=MS.gene91357.t1
Gene Sequence

>MS.gene91357

ATGTCGAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAGATGAAAAAAATGACCAACGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACGCTCTGCGGTGCAGATGTTGCTCTCGTTGTTTTCTCACCTGGGGAGAAGGTATTTTCATTTGGCCAACCCAATGTTGATACGGTCATAGACCGTTATCTCTCTCGAGTCCCACCCCAAAACAATGGTACCATGCAATTCATTGAGGCTCACCGTAGCGCCAATGTGCGCGAGCTCAATACTCAGCTGACTCAAATCAACCAGCTACTGGACATGGAGAAGAAACGTGCTGAAGAGCTGAGCAACTTGCGCAAGGCGACCGAGAGTCAGTTTTGGTGGGCTGGTCCCGTTGATGGGATGAATAGGGCCCAACTTGAATTTTTCAAAAAGGCTTTGGAGGAGACTAAGAAACTTGTTGGACATCATGCCGATAGGCTTGTAATCCAGGGTGCTCCTACTCAAACCTTTCAATTTTTTGGTGGAAATGGTTCATCTTCTAACATGCCTCTCCATCATCAGCGAAATCCTCCGCAAACTCAAATGTTTGCAACACAGTTTTTTCAGAATCCTATGTTTCAACCTCACTTGTTTGGCTTCAACAATACGGGGGGAGGGGGTGGATATGGACCCTCCAGATTCTTTTGA
Protein sequence

>MS.gene91357.t1

MSSGRKSRGRQKIEMKKMTNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSFGQPNVDTVIDRYLSRVPPQNNGTMQFIEAHRSANVRELNTQLTQINQLLDMEKKRAEELSNLRKATESQFWWAGPVDGMNRAQLEFFKKALEETKKLVGHHADRLVIQGAPTQTFQFFGGNGSSSNMPLHHQRNPPQTQMFATQFFQNPMFQPHLFGFNNTGGGGGYGPSRFF