AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91358

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91358.t1 MTR_8g043650 90.295 237 23 0 1 237 1 237 6.01e-160 442
MS.gene91358.t1 MTR_1g012570 89.451 237 25 0 1 237 1 237 2.77e-148 413
MS.gene91358.t1 MTR_1g105905 89.091 220 24 0 18 237 1 220 3.58e-147 409
MS.gene91358.t1 MTR_1g105910 87.764 237 29 0 1 237 1 237 8.87e-147 409
MS.gene91358.t1 MTR_1g105920 88.584 219 25 0 1 219 1 219 4.07e-145 405
MS.gene91358.t1 MTR_2g030740 85.232 237 35 0 1 237 1 237 3.68e-141 395
MS.gene91358.t1 MTR_3g052920 84.932 219 33 0 1 219 1 219 8.97e-139 389
MS.gene91358.t1 MTR_3g052870 80.365 219 24 3 1 219 1 200 1.48e-121 344
MS.gene91358.t1 MTR_5g055100 67.932 237 76 0 1 237 1 237 1.63e-118 337
MS.gene91358.t1 MTR_3g030770 71.915 235 48 3 1 225 1 227 1.91e-117 334
MS.gene91358.t1 MTR_0121s0080 70.042 237 70 1 1 237 1 236 5.98e-117 333
MS.gene91358.t1 MTR_1g108510 71.915 235 48 3 1 225 1 227 1.24e-116 332
MS.gene91358.t1 MTR_1g077360 69.778 225 68 0 1 225 1 225 1.18e-115 330
MS.gene91358.t1 MTR_2g085280 66.949 236 78 0 1 236 1 236 1.73e-115 330
MS.gene91358.t1 MTR_2g085250 66.949 236 78 0 1 236 1 236 6.23e-115 328
MS.gene91358.t1 MTR_1g075600 69.778 225 68 0 1 225 1 225 3.59e-114 327
MS.gene91358.t1 MTR_1g106070 85.165 182 27 0 1 182 1 182 3.87e-113 322
MS.gene91358.t1 MTR_2g093190 71.064 235 50 3 1 225 1 227 7.41e-113 323
MS.gene91358.t1 MTR_5g045560 69.620 237 72 0 1 237 1 237 2.89e-112 322
MS.gene91358.t1 MTR_1g108580 71.622 222 53 2 1 220 1 214 8.55e-110 315
MS.gene91358.t1 MTR_5g053390 67.556 225 73 0 1 225 1 225 4.46e-108 311
MS.gene91358.t1 MTR_7g062350 64.126 223 78 2 16 237 27 248 1.20e-96 283
MS.gene91358.t1 MTR_1g075570 64.607 178 49 1 18 195 1 164 1.79e-71 216
MS.gene91358.t1 MTR_0121s0100 76.562 128 30 0 1 128 1 128 5.03e-66 201
MS.gene91358.t1 MTR_3g080940 50.262 191 91 1 7 193 7 197 3.73e-63 196
MS.gene91358.t1 MTR_3g030780 72.868 129 35 0 1 129 1 129 2.13e-62 191
MS.gene91358.t1 MTR_3g067910 66.667 102 34 0 21 122 2 103 4.69e-45 146
MS.gene91358.t1 MTR_2g105290 40.351 171 92 2 5 172 8 171 8.29e-43 143
MS.gene91358.t1 MTR_8g086290 40.462 173 89 3 5 170 8 173 1.42e-40 137
MS.gene91358.t1 MTR_7g028448 44.805 154 73 3 5 158 8 149 2.82e-36 126
MS.gene91358.t1 MTR_4g036915 44.805 154 73 3 5 158 8 149 2.82e-36 126
MS.gene91358.t1 MTR_4g127140 38.674 181 91 4 5 172 8 181 4.50e-32 115
MS.gene91358.t1 MTR_1g108500 56.637 113 26 2 8 118 94 185 8.89e-30 114
MS.gene91358.t1 MTR_3g067875 83.929 56 9 0 18 73 1 56 1.33e-28 103
MS.gene91358.t1 MTR_3g067870 71.429 63 18 0 16 78 83 145 7.03e-25 96.7
MS.gene91358.t1 MTR_1g047550 40.426 141 70 4 9 135 2 142 5.24e-24 94.7
MS.gene91358.t1 MTR_8g051580 42.063 126 68 2 9 131 2 125 3.15e-23 92.8
MS.gene91358.t1 MTR_8g079502 38.462 143 70 4 9 135 2 142 1.41e-22 91.3
MS.gene91358.t1 MTR_4g131030 38.095 126 62 3 9 118 2 127 3.39e-22 90.9
MS.gene91358.t1 MTR_1g063160 44.643 112 57 3 9 118 2 110 3.54e-22 90.1
MS.gene91358.t1 MTR_3g067915 62.687 67 25 0 60 126 30 96 4.29e-22 87.4
MS.gene91358.t1 MTR_1g054265 42.478 113 63 1 9 121 2 112 6.27e-22 89.4
MS.gene91358.t1 MTR_8g046350 37.692 130 73 2 9 135 2 126 2.69e-21 87.4
MS.gene91358.t1 MTR_4g094632 40.000 110 64 1 9 118 2 109 2.02e-20 84.7
MS.gene91358.t1 MTR_4g094638 40.566 106 62 1 9 113 2 107 2.00e-18 80.1
MS.gene91358.t1 MTR_3g005530 51.471 68 33 0 9 76 2 69 2.76e-18 80.9
MS.gene91358.t1 MTR_1g053070 35.811 148 80 3 9 155 2 135 3.57e-18 80.9
MS.gene91358.t1 MTR_3g452380 41.509 106 52 1 3 108 11 106 3.92e-18 80.9
MS.gene91358.t1 MTR_4g102530 49.315 73 37 0 10 82 3 75 1.26e-17 78.6
MS.gene91358.t1 MTR_4g093970 54.545 66 30 0 10 75 29 94 1.83e-17 79.0
MS.gene91358.t1 MTR_2g017865 36.364 132 74 2 9 131 17 147 1.94e-17 79.3
MS.gene91358.t1 MTR_8g022970 33.121 157 92 3 8 158 17 166 2.67e-17 77.4
MS.gene91358.t1 MTR_5g066180 50.000 68 34 0 9 76 2 69 5.33e-17 77.4
MS.gene91358.t1 MTR_8g033270 50.000 68 34 0 9 76 2 69 1.10e-16 77.0
MS.gene91358.t1 MTR_8g087860 50.000 68 34 0 9 76 18 85 2.23e-16 75.9
MS.gene91358.t1 MTR_1g101970 48.529 68 35 0 9 76 2 69 3.27e-16 74.3
MS.gene91358.t1 MTR_6g464720 47.826 69 35 1 9 76 2 70 4.66e-16 75.1
MS.gene91358.t1 MTR_4g109830 46.377 69 36 1 9 76 2 70 5.19e-16 74.7
MS.gene91358.t1 MTR_8g033220 28.821 229 123 7 10 220 3 209 5.51e-16 74.7
MS.gene91358.t1 MTR_8g033220 28.821 229 123 7 10 220 3 209 5.89e-16 74.7
MS.gene91358.t1 MTR_5g032150 26.901 171 95 6 9 172 2 149 6.34e-16 74.7
MS.gene91358.t1 MTR_7g075870 37.273 110 67 1 10 119 3 110 9.24e-16 73.9
MS.gene91358.t1 MTR_2g009890 47.059 68 36 0 9 76 2 69 1.33e-15 74.3
MS.gene91358.t1 MTR_5g032520 27.119 177 99 6 9 178 2 155 1.44e-15 73.6
MS.gene91358.t1 MTR_3g102570 40.385 104 59 3 9 111 2 103 1.49e-15 74.7
MS.gene91358.t1 MTR_5g031000 47.059 68 36 0 9 76 2 69 3.99e-15 72.4
MS.gene91358.t1 MTR_6g015975 47.826 69 35 1 9 76 2 70 4.19e-15 72.8
MS.gene91358.t1 MTR_5g031000 47.059 68 36 0 9 76 2 69 4.36e-15 72.4
MS.gene91358.t1 MTR_7g016600 47.826 69 35 1 9 76 2 70 5.05e-15 72.4
MS.gene91358.t1 MTR_0003s0590 33.562 146 66 2 9 123 2 147 5.10e-15 72.4
MS.gene91358.t1 MTR_8g066260 39.759 83 47 1 9 91 2 81 5.51e-15 72.0
MS.gene91358.t1 MTR_5g021270 48.571 70 34 1 9 76 2 71 7.11e-15 71.6
MS.gene91358.t1 MTR_3g437790 33.803 142 77 4 26 158 30 163 7.15e-15 70.9
MS.gene91358.t1 MTR_2g461710 53.571 56 26 0 9 64 2 57 7.39e-15 67.4
MS.gene91358.t1 MTR_5g021270 48.571 70 34 1 9 76 2 71 7.51e-15 71.6
MS.gene91358.t1 MTR_5g046790 43.662 71 37 1 9 79 2 69 9.64e-15 70.9
MS.gene91358.t1 MTR_4g084740 44.737 76 40 2 9 83 2 76 1.68e-14 72.0
MS.gene91358.t1 MTR_7g075870 36.937 111 67 2 10 119 3 111 1.95e-14 70.1
MS.gene91358.t1 MTR_5g046870 46.377 69 36 1 9 76 2 70 2.81e-14 67.4
MS.gene91358.t1 MTR_4g051538 34.161 161 92 4 5 164 5 152 3.07e-14 70.1
MS.gene91358.t1 MTR_1g038300 45.714 70 36 1 9 76 2 71 3.27e-14 70.1
MS.gene91358.t1 MTR_3g088615 42.857 70 38 1 9 76 2 71 3.31e-14 68.9
MS.gene91358.t1 MTR_7g016630 42.029 69 39 1 9 76 2 70 3.88e-14 70.1
MS.gene91358.t1 MTR_1g029670 45.455 66 35 1 9 74 2 66 7.57e-14 67.8
MS.gene91358.t1 MTR_3g109930 31.579 133 87 2 27 158 20 149 7.79e-14 67.8
MS.gene91358.t1 MTR_7g075850 44.286 70 37 1 9 76 2 71 2.16e-13 67.8
MS.gene91358.t1 MTR_3g084980 46.377 69 36 1 9 76 2 70 2.29e-13 67.8
MS.gene91358.t1 MTR_5g066960 47.368 57 30 0 9 65 2 58 2.46e-13 63.2
MS.gene91358.t1 MTR_8g097090 44.928 69 37 1 9 76 2 70 2.73e-13 67.4
MS.gene91358.t1 MTR_3g113030 46.032 63 34 0 9 71 2 64 3.21e-13 67.0
MS.gene91358.t1 MTR_4g109810 50.000 56 28 0 9 64 2 57 5.05e-13 66.6
MS.gene91358.t1 MTR_4g093030 40.541 74 44 0 9 82 2 75 3.80e-12 62.8
MS.gene91358.t1 MTR_4g108720 27.273 176 106 9 9 172 2 167 2.41e-11 62.8
MS.gene91358.t1 MTR_4g036050 30.201 149 87 6 9 156 2 134 3.41e-11 60.5
MS.gene91358.t1 MTR_4g036050 30.201 149 87 6 9 156 2 134 4.28e-11 60.5
MS.gene91358.t1 MTR_4g036050 38.571 70 42 1 9 77 2 71 4.91e-11 60.5
MS.gene91358.t1 MTR_4g036050 30.201 149 87 6 9 156 2 134 4.92e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91358.t1 AT5G60440 53.723 188 80 3 5 189 3 186 1.10e-61 195
MS.gene91358.t1 AT2G24840 48.171 164 74 4 6 163 60 218 1.37e-42 145
MS.gene91358.t1 AT1G01530 41.053 190 104 3 4 192 2 184 6.59e-40 138
MS.gene91358.t1 AT1G65360 39.153 189 108 3 5 192 3 185 1.51e-39 136
MS.gene91358.t1 AT4G36590 43.827 162 85 2 5 160 3 164 6.68e-37 130
MS.gene91358.t1 AT2G34440 37.349 166 92 4 9 169 2 160 2.34e-28 105
MS.gene91358.t1 AT3G66656 41.221 131 72 2 9 134 2 132 2.19e-25 98.6
MS.gene91358.t1 AT3G04100 29.651 172 117 2 2 169 7 178 1.60e-23 94.4
MS.gene91358.t1 AT1G72350 35.333 150 64 4 9 158 43 159 1.40e-22 92.4
MS.gene91358.t1 AT1G28460 28.994 169 116 2 5 169 4 172 4.10e-19 82.0
MS.gene91358.t1 AT4G22950 48.684 76 39 0 10 85 3 78 1.06e-18 80.9
MS.gene91358.t1 AT1G29962 29.070 172 115 4 5 169 4 175 1.98e-18 80.5
MS.gene91358.t1 AT4G18960 31.197 234 127 8 5 218 15 234 2.04e-18 81.6
MS.gene91358.t1 AT4G09960 45.349 86 46 1 9 93 2 87 2.05e-18 81.3
MS.gene91358.t1 AT4G09960 45.349 86 46 1 9 93 2 87 2.56e-18 81.3
MS.gene91358.t1 AT4G09960 45.349 86 46 1 9 93 3 88 2.63e-18 81.3
MS.gene91358.t1 AT4G09960 45.349 86 46 1 9 93 12 97 3.47e-18 80.9
MS.gene91358.t1 AT4G22950 48.684 76 39 0 10 85 3 78 4.23e-18 80.1
MS.gene91358.t1 AT4G22950 48.684 76 39 0 10 85 3 78 4.23e-18 80.1
MS.gene91358.t1 AT2G45650 51.471 68 33 0 9 76 2 69 4.66e-18 80.9
MS.gene91358.t1 AT4G09960 45.349 86 46 1 9 93 28 113 4.91e-18 80.9
MS.gene91358.t1 AT2G45660 51.471 68 33 0 10 77 3 70 5.64e-18 78.6
MS.gene91358.t1 AT4G24540 34.899 149 80 4 9 157 2 133 5.69e-18 80.1
MS.gene91358.t1 AT4G09960 45.349 86 46 1 9 93 97 182 1.29e-17 80.9
MS.gene91358.t1 AT2G45660 51.471 68 33 0 10 77 3 70 1.41e-17 79.0
MS.gene91358.t1 AT5G51870 52.239 67 32 0 10 76 3 69 4.67e-17 76.3
MS.gene91358.t1 AT5G51870 52.239 67 32 0 10 76 3 69 5.46e-17 77.0
MS.gene91358.t1 AT5G51870 48.611 72 37 0 5 76 21 92 9.80e-17 76.3
MS.gene91358.t1 AT5G51870 52.239 67 32 0 10 76 3 69 9.89e-17 76.6
MS.gene91358.t1 AT5G51870 52.239 67 32 0 10 76 13 79 1.16e-16 76.6
MS.gene91358.t1 AT3G57230 45.588 68 37 0 9 76 2 69 1.55e-16 74.3
MS.gene91358.t1 AT2G22540 36.842 133 74 4 9 132 2 133 1.58e-16 76.6
MS.gene91358.t1 AT2G22540 36.842 133 74 4 9 132 2 133 1.58e-16 76.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.88e-16 73.2
MS.gene91358.t1 AT3G61120 50.000 68 34 0 9 76 2 69 1.97e-16 76.3
MS.gene91358.t1 AT5G23260 44.330 97 46 3 2 90 9 105 2.16e-16 76.6
MS.gene91358.t1 AT5G23260 44.330 97 46 3 2 90 9 105 2.30e-16 76.3
MS.gene91358.t1 AT2G42830 46.053 76 41 0 1 76 9 84 2.41e-16 75.9
MS.gene91358.t1 AT3G58780 49.296 71 36 0 6 76 14 84 2.72e-16 75.9
MS.gene91358.t1 AT5G10140 49.275 69 34 1 9 76 2 70 2.74e-16 74.3
MS.gene91358.t1 AT2G42830 46.053 76 41 0 1 76 9 84 2.80e-16 75.9
MS.gene91358.t1 AT3G58780 49.296 71 36 0 6 76 20 90 3.21e-16 75.9
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.58e-16 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.58e-16 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.58e-16 73.6
MS.gene91358.t1 AT5G10140 49.275 69 34 1 9 76 2 70 4.07e-16 73.9
MS.gene91358.t1 AT4G37940 47.059 68 36 0 9 76 2 69 4.16e-16 74.7
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 4.20e-16 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 4.20e-16 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 4.20e-16 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 4.20e-16 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 4.20e-16 73.6
MS.gene91358.t1 AT3G57390 48.529 68 35 0 9 76 2 69 4.26e-16 75.1
MS.gene91358.t1 AT5G23260 45.455 88 42 2 9 90 2 89 4.27e-16 75.5
MS.gene91358.t1 AT5G23260 45.455 88 42 2 9 90 2 89 4.35e-16 75.1
MS.gene91358.t1 AT4G37940 47.059 68 36 0 9 76 2 69 4.47e-16 73.9
MS.gene91358.t1 AT5G10140 49.275 69 34 1 9 76 2 70 4.67e-16 74.3
MS.gene91358.t1 AT4G37940 47.059 68 36 0 9 76 2 69 4.70e-16 75.1
MS.gene91358.t1 AT3G54340 36.842 133 75 5 9 134 2 132 5.21e-16 74.7
MS.gene91358.t1 AT3G30260 29.091 165 99 4 9 172 2 149 5.27e-16 75.1
MS.gene91358.t1 AT3G58780 49.296 71 36 0 6 76 14 84 5.52e-16 75.5
MS.gene91358.t1 AT5G13790 41.935 93 45 1 9 101 2 85 5.53e-16 75.5
MS.gene91358.t1 AT5G10140 49.275 69 34 1 9 76 2 70 6.12e-16 73.6
MS.gene91358.t1 AT5G13790 50.000 68 34 0 9 76 2 69 7.65e-16 75.1
MS.gene91358.t1 AT3G57230 45.588 68 37 0 9 76 2 69 7.98e-16 74.7
MS.gene91358.t1 AT3G57230 45.588 68 37 0 9 76 2 69 7.98e-16 74.7
MS.gene91358.t1 AT5G51860 50.746 67 33 0 10 76 3 69 8.45e-16 73.6
MS.gene91358.t1 AT3G57390 48.529 68 35 0 9 76 2 69 9.13e-16 74.7
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.12e-15 73.2
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.12e-15 73.2
MS.gene91358.t1 AT5G51860 50.746 67 33 0 10 76 3 69 1.20e-15 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.21e-15 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.21e-15 73.6
MS.gene91358.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.21e-15 73.6
MS.gene91358.t1 AT4G11880 47.222 72 37 1 10 80 3 74 1.67e-15 72.4
MS.gene91358.t1 AT4G11880 47.222 72 37 1 10 80 3 74 1.67e-15 72.4
MS.gene91358.t1 AT1G69120 42.169 83 45 1 9 91 2 81 1.99e-15 73.2
MS.gene91358.t1 AT5G60910 47.887 71 34 1 9 79 2 69 2.19e-15 73.2
MS.gene91358.t1 AT1G22130 35.238 105 67 1 9 112 2 106 2.31e-15 74.3
MS.gene91358.t1 AT2G22630 45.588 68 37 0 9 76 2 69 2.42e-15 72.8
MS.gene91358.t1 AT2G22630 45.588 68 37 0 9 76 2 69 2.42e-15 72.8
MS.gene91358.t1 AT1G77980 36.190 105 66 1 9 112 2 106 2.75e-15 74.3
MS.gene91358.t1 AT4G11880 47.222 72 37 1 10 80 3 74 3.02e-15 72.8
MS.gene91358.t1 AT4G11880 47.222 72 37 1 10 80 3 74 3.02e-15 72.8
MS.gene91358.t1 AT1G77950 44.737 76 40 2 9 83 2 76 3.14e-15 73.2
MS.gene91358.t1 AT1G77950 44.737 76 40 2 9 83 2 76 3.14e-15 73.2
MS.gene91358.t1 AT1G77950 44.737 76 40 2 9 83 2 76 3.14e-15 73.2
MS.gene91358.t1 AT1G77950 44.737 76 40 2 9 83 2 76 3.14e-15 73.2
MS.gene91358.t1 AT1G69120 39.560 91 52 1 9 99 2 89 3.54e-15 73.2
MS.gene91358.t1 AT1G26310 46.377 69 36 1 9 76 2 70 3.83e-15 72.8
MS.gene91358.t1 AT1G17310 50.633 79 37 1 8 86 47 123 8.82e-15 71.2
MS.gene91358.t1 AT5G20240 45.714 70 36 1 9 76 2 71 9.34e-15 69.7
MS.gene91358.t1 AT5G15800 47.826 69 35 1 9 76 2 70 1.02e-14 71.6
MS.gene91358.t1 AT1G17310 50.633 79 37 1 8 86 58 134 1.03e-14 71.2
MS.gene91358.t1 AT5G20240 45.714 70 36 1 9 76 2 71 1.40e-14 70.5
MS.gene91358.t1 AT1G28450 27.219 169 113 4 5 163 4 172 1.44e-14 70.1
MS.gene91358.t1 AT5G15800 47.826 69 35 1 9 76 2 70 1.67e-14 71.2
MS.gene91358.t1 AT2G14210 44.928 69 37 1 9 76 2 70 2.82e-14 70.1
MS.gene91358.t1 AT2G14210 44.928 69 37 1 9 76 2 70 4.02e-14 69.7
MS.gene91358.t1 AT2G22540 36.090 133 70 5 9 132 2 128 4.40e-14 69.7
MS.gene91358.t1 AT5G65050 44.928 69 37 1 9 76 2 70 4.63e-14 68.6
MS.gene91358.t1 AT3G02310 46.377 69 36 1 9 76 2 70 5.44e-14 68.9
MS.gene91358.t1 AT5G65050 44.928 69 37 1 9 76 2 70 8.19e-14 68.2
MS.gene91358.t1 AT5G65050 44.928 69 37 1 9 76 2 70 8.52e-14 67.8
MS.gene91358.t1 AT3G58780 51.667 60 29 0 6 65 14 73 8.53e-14 68.9
MS.gene91358.t1 AT1G24260 28.745 247 142 10 9 234 2 235 9.01e-14 68.9
MS.gene91358.t1 AT5G65050 44.928 69 37 1 9 76 2 70 9.21e-14 67.8
MS.gene91358.t1 AT3G58780 51.667 60 29 0 6 65 14 73 1.10e-13 68.9
MS.gene91358.t1 AT1G24260 40.206 97 55 1 9 105 2 95 1.24e-13 68.6
MS.gene91358.t1 AT2G03710 44.286 70 37 1 9 76 2 71 1.29e-13 67.4
MS.gene91358.t1 AT5G65060 44.928 69 37 1 9 76 2 70 1.77e-13 67.0
MS.gene91358.t1 AT3G02310 46.377 69 36 1 9 76 2 70 1.84e-13 68.2
MS.gene91358.t1 AT5G65060 44.928 69 37 1 9 76 2 70 1.89e-13 67.0
MS.gene91358.t1 AT5G65060 44.928 69 37 1 9 76 2 70 2.08e-13 67.0
MS.gene91358.t1 AT2G03710 44.286 70 37 1 9 76 2 71 2.48e-13 67.8
MS.gene91358.t1 AT1G47760 32.231 121 66 3 9 129 2 106 2.54e-13 66.6
MS.gene91358.t1 AT2G03710 44.286 70 37 1 9 76 2 71 2.55e-13 67.8
MS.gene91358.t1 AT1G24260 51.786 56 27 0 9 64 2 57 2.58e-13 67.8
MS.gene91358.t1 AT1G71692 42.857 70 39 1 9 77 2 71 4.08e-13 66.6
MS.gene91358.t1 AT5G65070 40.580 69 40 1 9 76 2 70 7.13e-13 64.7
MS.gene91358.t1 AT5G65070 40.580 69 40 1 9 76 2 70 1.28e-12 65.1
MS.gene91358.t1 AT5G65070 40.580 69 40 1 9 76 2 70 2.50e-12 64.7
MS.gene91358.t1 AT5G65070 40.580 69 40 1 9 76 2 70 2.78e-12 64.3
MS.gene91358.t1 AT5G65070 45.614 57 31 0 9 65 2 58 1.06e-11 63.2
MS.gene91358.t1 AT4G37435 38.889 72 43 1 9 79 2 73 4.13e-11 60.5
MS.gene91358.t1 AT5G65080 41.333 75 41 2 5 76 3 77 8.62e-11 59.7
MS.gene91358.t1 AT5G27130 41.176 85 46 2 2 82 6 90 8.67e-11 61.2

Find 53 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAGTTTGCGGAGGATT+TGG 0.289021 1.3:+72414016 None:intergenic
ATGAGGGGAGGAGGTGGATA+TGG 0.298786 1.3:-72413932 MS.gene91358:CDS
TGGTGGGCTGGTCCTATTGA+TGG 0.299486 1.3:-72414202 MS.gene91358:CDS
ATTGCATGGTACCATTGTTT+TGG 0.337688 1.3:+72414359 None:intergenic
AAGCTACAGAGACTCAATTT+TGG 0.343868 1.3:-72414222 MS.gene91358:CDS
TTGTTGCAGATCATGCTAAT+AGG 0.355866 1.3:-72414123 MS.gene91358:CDS
TGTTTGGTTTGAACAATATG+AGG 0.379936 1.3:-72413949 MS.gene91358:CDS
ATGTTGCAACCTCATTTGTT+TGG 0.381828 1.3:-72413965 MS.gene91358:CDS
TGCTAATAGGCTTGTAATCC+AGG 0.391884 1.3:-72414110 MS.gene91358:CDS
GTCCTATTGATGGGATGAAT+AGG 0.423671 1.3:-72414192 MS.gene91358:CDS
TCCTATTGATGGGATGAATA+GGG 0.430427 1.3:-72414191 MS.gene91358:CDS
AACAATATGAGGGGAGGAGG+TGG 0.432926 1.3:-72413938 MS.gene91358:CDS
TCTTCTCGTTGTCTAGTAGC+TGG 0.435079 1.3:+72414275 None:intergenic
GGTGGGCTGGTCCTATTGAT+GGG 0.454181 1.3:-72414201 MS.gene91358:CDS
ATGATCGAGAGGCATGTTAG+AGG 0.481598 1.3:+72414042 None:intergenic
TCCCTATTCATCCCATCAAT+AGG 0.492795 1.3:+72414190 None:intergenic
GCTGGAAACATTTGAGTTTG+CGG 0.497653 1.3:+72414007 None:intergenic
AACAAATGAGGTTGCAACAT+GGG 0.505197 1.3:+72413968 None:intergenic
ATCTATGACCGTATCAACAT+TGG 0.506900 1.3:+72414405 None:intergenic
GTTTGGTTTGAACAATATGA+GGG 0.513819 1.3:-72413948 MS.gene91358:CDS
GCTCGCGCACGTTGGCGCTA+CGG 0.534754 1.3:+72414323 None:intergenic
GGGCTCGGATCAAAAGAATC+CGG 0.538178 1.3:+72413904 None:intergenic
TCTATGACCGTATCAACATT+GGG 0.542196 1.3:+72414406 None:intergenic
TTGAACAATATGAGGGGAGG+AGG 0.542532 1.3:-72413941 MS.gene91358:CDS
TGGCCAACCCAATGTTGATA+CGG 0.545005 1.3:-72414413 MS.gene91358:CDS
TTGTTCAAACCAAACAAATG+AGG 0.545399 1.3:+72413956 None:intergenic
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 1.3:-72414525 MS.gene91358:CDS
AGCGACATGTGCACCACAGA+TGG 0.558797 1.3:+72414474 None:intergenic
GGAGGTGGATATGGACCCTC+CGG 0.560213 1.3:-72413923 MS.gene91358:CDS
CTTCAACCATGTCGAGTGGA+AGG 0.562158 1.3:-72414612 None:intergenic
AATGAAAATACCTTCTCTCC+AGG 0.563686 1.3:+72414436 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 1.3:-72414526 MS.gene91358:CDS
AGTATTGAGCTCGCGCACGT+TGG 0.584782 1.3:+72414315 None:intergenic
ACAGATGGTACAAAGCTCAC+TGG 0.589892 1.3:+72414489 None:intergenic
GGTTTGAACAATATGAGGGG+AGG 0.594346 1.3:-72413944 MS.gene91358:CDS
AAACAAATGAGGTTGCAACA+TGG 0.599507 1.3:+72413967 None:intergenic
TGACCGTATCAACATTGGGT+TGG 0.600758 1.3:+72414410 None:intergenic
AGGTTTGAGTAGGAGCACCC+TGG 0.605264 1.3:+72414092 None:intergenic
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 1.3:+72414512 None:intergenic
ACAAATGAGGTTGCAACATG+GGG 0.619371 1.3:+72413969 None:intergenic
GGATTTGGTTGATGATCGAG+AGG 0.624852 1.3:+72414031 None:intergenic
TGTGCTTCAACCATGTCGAG+TGG 0.638522 1.3:-72414616 None:intergenic
TGGTACCATGCAATTCATTG+AGG 0.638950 1.3:-72414350 MS.gene91358:CDS
GTGAGCCTCAATGAATTGCA+TGG 0.640763 1.3:+72414345 None:intergenic
GCTAATAGGCTTGTAATCCA+GGG 0.641442 1.3:-72414109 MS.gene91358:CDS
CGAGTCCCACCCCAAAACAA+TGG 0.641950 1.3:-72414370 MS.gene91358:CDS
TTTGGTTTGAACAATATGAG+GGG 0.643683 1.3:-72413947 MS.gene91358:CDS
GGAAACATTTGAGTTTGCGG+AGG 0.647148 1.3:+72414010 None:intergenic
AGTGAGCTTTGTACCATCTG+TGG 0.652271 1.3:-72414487 MS.gene91358:CDS
CTCGGATCAAAAGAATCCGG+AGG 0.655674 1.3:+72413907 None:intergenic
TCGGATCAAAAGAATCCGGA+GGG 0.678771 1.3:+72413908 None:intergenic
TCGAGTGGAAGGAAAAGCCG+AGG 0.691796 1.3:-72414601 MS.gene91358:CDS
AGACAACGAGAAGAAACGTG+CGG 0.746947 1.3:-72414266 MS.gene91358:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCATCTCAATCTTT+TGG + chr1.3:72413945-72413964 None:intergenic 20.0%
! ATTTCCAACAAAAAATGGAA+AGG + chr1.3:72414448-72414467 None:intergenic 25.0%
!!! CCAACTTGAATTTTTCAAAA+AGG - chr1.3:72414350-72414369 MS.gene91358:CDS 25.0%
!!! CCTTTTTGAAAAATTCAAGT+TGG + chr1.3:72414353-72414372 None:intergenic 25.0%
!!! TGAATTTTTCAAAAAGGCTT+TGG - chr1.3:72414356-72414375 MS.gene91358:CDS 25.0%
!!! TTTCCATTTTTTGTTGGAAA+TGG - chr1.3:72414447-72414466 MS.gene91358:CDS 25.0%
AAAAATGGAAAGGTTTGAGT+AGG + chr1.3:72414438-72414457 None:intergenic 30.0%
GAACCATTTCCAACAAAAAA+TGG + chr1.3:72414453-72414472 None:intergenic 30.0%
TTGTTCAAACCAAACAAATG+AGG + chr1.3:72414564-72414583 None:intergenic 30.0%
!! ATTTTTCAAAAAGGCTTTGG+AGG - chr1.3:72414359-72414378 MS.gene91358:CDS 30.0%
!! GTTTGGTTTGAACAATATGA+GGG - chr1.3:72414569-72414588 MS.gene91358:CDS 30.0%
!! TGTTTGGTTTGAACAATATG+AGG - chr1.3:72414568-72414587 MS.gene91358:CDS 30.0%
!! TTTGGTTTGAACAATATGAG+GGG - chr1.3:72414570-72414589 MS.gene91358:CDS 30.0%
!!! CAAACCTTTCCATTTTTTGT+TGG - chr1.3:72414441-72414460 MS.gene91358:CDS 30.0%
AAACAAATGAGGTTGCAACA+TGG + chr1.3:72414553-72414572 None:intergenic 35.0%
AACAAATGAGGTTGCAACAT+GGG + chr1.3:72414552-72414571 None:intergenic 35.0%
AATGAAAATACCTTCTCTCC+AGG + chr1.3:72414084-72414103 None:intergenic 35.0%
ATCTATGACCGTATCAACAT+TGG + chr1.3:72414115-72414134 None:intergenic 35.0%
ATGTTGCAACCTCATTTGTT+TGG - chr1.3:72414552-72414571 MS.gene91358:CDS 35.0%
TCCTATTGATGGGATGAATA+GGG - chr1.3:72414326-72414345 MS.gene91358:CDS 35.0%
TCTATGACCGTATCAACATT+GGG + chr1.3:72414114-72414133 None:intergenic 35.0%
TTGTTGCAGATCATGCTAAT+AGG - chr1.3:72414394-72414413 MS.gene91358:CDS 35.0%
! AAGCTACAGAGACTCAATTT+TGG - chr1.3:72414295-72414314 MS.gene91358:CDS 35.0%
! ATTGCATGGTACCATTGTTT+TGG + chr1.3:72414161-72414180 None:intergenic 35.0%
! TTGCATGGTACCATTGTTTT+GGG + chr1.3:72414160-72414179 None:intergenic 35.0%
!! TACAGAGACTCAATTTTGGT+GGG - chr1.3:72414299-72414318 MS.gene91358:CDS 35.0%
!!! GGAGAGAAGGTATTTTCATT+TGG - chr1.3:72414084-72414103 MS.gene91358:CDS 35.0%
ACAAATGAGGTTGCAACATG+GGG + chr1.3:72414551-72414570 None:intergenic 40.0%
GCTAATAGGCTTGTAATCCA+GGG - chr1.3:72414408-72414427 MS.gene91358:CDS 40.0%
GTCCTATTGATGGGATGAAT+AGG - chr1.3:72414325-72414344 MS.gene91358:CDS 40.0%
TCCCTATTCATCCCATCAAT+AGG + chr1.3:72414330-72414349 None:intergenic 40.0%
TGCTAATAGGCTTGTAATCC+AGG - chr1.3:72414407-72414426 MS.gene91358:CDS 40.0%
TGGTACCATGCAATTCATTG+AGG - chr1.3:72414167-72414186 MS.gene91358:CDS 40.0%
! ATTTGAGTTTGCGGAGGATT+TGG + chr1.3:72414504-72414523 None:intergenic 40.0%
! CTACAGAGACTCAATTTTGG+TGG - chr1.3:72414298-72414317 MS.gene91358:CDS 40.0%
! GCTGGAAACATTTGAGTTTG+CGG + chr1.3:72414513-72414532 None:intergenic 40.0%
!! TGCATGGTACCATTGTTTTG+GGG + chr1.3:72414159-72414178 None:intergenic 40.0%
ACAGATGGTACAAAGCTCAC+TGG + chr1.3:72414031-72414050 None:intergenic 45.0%
AGACAACGAGAAGAAACGTG+CGG - chr1.3:72414251-72414270 MS.gene91358:CDS 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + chr1.3:72414008-72414027 None:intergenic 45.0%
GGTTTGAACAATATGAGGGG+AGG - chr1.3:72414573-72414592 MS.gene91358:CDS 45.0%
GTGAGCCTCAATGAATTGCA+TGG + chr1.3:72414175-72414194 None:intergenic 45.0%
TCTTCTCGTTGTCTAGTAGC+TGG + chr1.3:72414245-72414264 None:intergenic 45.0%
TGACCGTATCAACATTGGGT+TGG + chr1.3:72414110-72414129 None:intergenic 45.0%
TGGCCAACCCAATGTTGATA+CGG - chr1.3:72414104-72414123 MS.gene91358:CDS 45.0%
TTGAACAATATGAGGGGAGG+AGG - chr1.3:72414576-72414595 MS.gene91358:CDS 45.0%
! AGTGAGCTTTGTACCATCTG+TGG - chr1.3:72414030-72414049 MS.gene91358:CDS 45.0%
! ATGATCGAGAGGCATGTTAG+AGG + chr1.3:72414478-72414497 None:intergenic 45.0%
! GGAAACATTTGAGTTTGCGG+AGG + chr1.3:72414510-72414529 None:intergenic 45.0%
! TCTCAATCTTTTGGCGACCT+CGG + chr1.3:72413936-72413955 None:intergenic 45.0%
! TGTTTTCTCACCTGGAGAGA+AGG - chr1.3:72414071-72414090 MS.gene91358:CDS 45.0%
!! GGATTTGGTTGATGATCGAG+AGG + chr1.3:72414489-72414508 None:intergenic 45.0%
!! GGGTTCTGAAAAAACTGTGC+TGG + chr1.3:72414531-72414550 None:intergenic 45.0%
!!! ATGGTACCATTGTTTTGGGG+TGG + chr1.3:72414156-72414175 None:intergenic 45.0%
!!! TGGTACCATTGTTTTGGGGT+GGG + chr1.3:72414155-72414174 None:intergenic 45.0%
AACAATATGAGGGGAGGAGG+TGG - chr1.3:72414579-72414598 MS.gene91358:CDS 50.0%
!! GAGACTCAATTTTGGTGGGC+TGG - chr1.3:72414303-72414322 MS.gene91358:CDS 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG - chr1.3:72414063-72414082 MS.gene91358:CDS 50.0%
AGCGACATGTGCACCACAGA+TGG + chr1.3:72414046-72414065 None:intergenic 55.0%
ATGAGGGGAGGAGGTGGATA+TGG - chr1.3:72414585-72414604 MS.gene91358:CDS 55.0%
CGAGTCCCACCCCAAAACAA+TGG - chr1.3:72414147-72414166 MS.gene91358:CDS 55.0%
TCGAGTGGAAGGAAAAGCCG+AGG - chr1.3:72413916-72413935 MS.gene91358:CDS 55.0%
! AGTATTGAGCTCGCGCACGT+TGG + chr1.3:72414205-72414224 None:intergenic 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - chr1.3:72413991-72414010 MS.gene91358:CDS 55.0%
!! AGGTTTGAGTAGGAGCACCC+TGG + chr1.3:72414428-72414447 None:intergenic 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - chr1.3:72413992-72414011 MS.gene91358:CDS 55.0%
!! GGTGGGCTGGTCCTATTGAT+GGG - chr1.3:72414316-72414335 MS.gene91358:CDS 55.0%
!! TGGTGGGCTGGTCCTATTGA+TGG - chr1.3:72414315-72414334 MS.gene91358:CDS 55.0%
GGAGGTGGATATGGACCCTC+CGG - chr1.3:72414594-72414613 MS.gene91358:CDS 60.0%
GCTCGCGCACGTTGGCGCTA+CGG + chr1.3:72414197-72414216 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 72413913 72414626 72413913 ID=MS.gene91358
chr1.3 mRNA 72413913 72414626 72413913 ID=MS.gene91358.t1;Parent=MS.gene91358
chr1.3 exon 72413913 72414626 72413913 ID=MS.gene91358.t1.exon1;Parent=MS.gene91358.t1
chr1.3 CDS 72413913 72414626 72413913 ID=cds.MS.gene91358.t1;Parent=MS.gene91358.t1
Gene Sequence

>MS.gene91358

ATGTCGAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAGATGAAAAAAATGAGCAACGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGTACCATCTGTGGTGCACATGTCGCTCTCGTTGTTTTCTCACCTGGAGAGAAGGTATTTTCATTTGGCCAACCCAATGTTGATACGGTCATAGATCGTTATCTTTCTCGAGTCCCACCCCAAAACAATGGTACCATGCAATTCATTGAGGCTCACCGTAGCGCCAACGTGCGCGAGCTCAATACTCAGTTGACTCAGATCAACCAGCTACTAGACAACGAGAAGAAACGTGCGGAAGAGCTGAGACACTTGCGCAAAGCTACAGAGACTCAATTTTGGTGGGCTGGTCCTATTGATGGGATGAATAGGGACCAACTTGAATTTTTCAAAAAGGCTTTGGAGGCGCTTTCGAAACTTGTTGCAGATCATGCTAATAGGCTTGTAATCCAGGGTGCTCCTACTCAAACCTTTCCATTTTTTGTTGGAAATGGTTCATCCTCTAACATGCCTCTCGATCATCAACCAAATCCTCCGCAAACTCAAATGTTTCCAGCACAGTTTTTTCAGAACCCCATGTTGCAACCTCATTTGTTTGGTTTGAACAATATGAGGGGAGGAGGTGGATATGGACCCTCCGGATTCTTTTGA
Protein sequence

>MS.gene91358.t1

MSSGRKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTICGAHVALVVFSPGEKVFSFGQPNVDTVIDRYLSRVPPQNNGTMQFIEAHRSANVRELNTQLTQINQLLDNEKKRAEELRHLRKATETQFWWAGPIDGMNRDQLEFFKKALEALSKLVADHANRLVIQGAPTQTFPFFVGNGSSSNMPLDHQPNPPQTQMFPAQFFQNPMLQPHLFGLNNMRGGGGYGPSGFF