Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91476.t1 | RHN50467.1 | 91.6 | 691 | 55 | 2 | 1 | 690 | 54 | 742 | 0.00E+00 | 1270 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91476.t1 | Q42961 | 31.8 | 390 | 257 | 8 | 98 | 480 | 88 | 475 | 2.6e-44 | 181.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91476.t1 | A0A396HHU0 | 91.6 | 691 | 55 | 2 | 1 | 690 | 54 | 742 | 0.0e+00 | 1270.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050787 | MS.gene91476 | 0.803753 | 3.00E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene91476 | 0.821414 | 4.09E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene91476 | 0.803315 | 3.70E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene91476 | 0.817752 | 2.80E-52 | -1.69E-46 |
| MS.gene057121 | MS.gene91476 | 0.804266 | 2.35E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene91476 | 0.806267 | 8.94E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene91476 | 0.804623 | 1.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 112 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAATACAGAAAATAATT+TGG | 0.158783 | 6.1:-4725378 | MS.gene91476:intron |
| TTCTGAAATTTGACAACTTT+TGG | 0.162141 | 6.1:+4728490 | None:intergenic |
| TTCATTGTCTTCTATAAATA+TGG | 0.202946 | 6.1:-4725209 | MS.gene91476:CDS |
| TGCTACATATGGTTTCTTAT+TGG | 0.205027 | 6.1:+4726446 | None:intergenic |
| CAATCTCTTGTGGTTGATAT+TGG | 0.219246 | 6.1:-4724619 | MS.gene91476:CDS |
| AGAAAAGATTTGAACTTTCT+TGG | 0.220174 | 6.1:-4724421 | MS.gene91476:CDS |
| TTTCCTAGGGAGGAGCTATT+TGG | 0.263940 | 6.1:-4727052 | MS.gene91476:CDS |
| TTGCAAATGTAAGCTTGTTT+TGG | 0.274490 | 6.1:-4723182 | MS.gene91476:CDS |
| AAGAAAGCTCCCTGGTGTTT+TGG | 0.283155 | 6.1:-4725149 | MS.gene91476:CDS |
| ATGAAAACCCATTTGGAGTT+AGG | 0.283264 | 6.1:-4723135 | MS.gene91476:CDS |
| GTCAAATTTCAGAAATATAA+TGG | 0.303499 | 6.1:-4728481 | MS.gene91476:CDS |
| ATCCACCACTGCTTCAATTA+AGG | 0.305750 | 6.1:+4723667 | None:intergenic |
| TGTTCAGGTTTATTGAAATC+AGG | 0.309787 | 6.1:+4723713 | None:intergenic |
| TGTTAGATTTACATTGATAA+TGG | 0.311231 | 6.1:-4727118 | MS.gene91476:intron |
| TTCTTCTTGAAATGGCAAAA+AGG | 0.311642 | 6.1:-4724444 | MS.gene91476:CDS |
| CCTGTAACATTGGATGAAAT+TGG | 0.327022 | 6.1:-4725912 | MS.gene91476:CDS |
| TGAAATCTGATTGATTCTTC+TGG | 0.327378 | 6.1:+4726975 | None:intergenic |
| GAAATATAATGGTGCTCTAT+TGG | 0.327541 | 6.1:-4728470 | MS.gene91476:CDS |
| GCAGTTTCAATCTAGTGAAT+TGG | 0.334346 | 6.1:-4728615 | None:intergenic |
| AGTACAAGTTCCTATTGATT+TGG | 0.339322 | 6.1:-4726190 | MS.gene91476:CDS |
| CCAATTTCATCCAATGTTAC+AGG | 0.340573 | 6.1:+4725912 | None:intergenic |
| ACAGGAAATGGAGAGTTAAC+AGG | 0.350856 | 6.1:-4728225 | MS.gene91476:intron |
| GACAAGCTATCAGAGATTAA+AGG | 0.350979 | 6.1:-4726708 | MS.gene91476:CDS |
| TTCTGCTATGCTTGTCTAGC+TGG | 0.352678 | 6.1:-4726516 | MS.gene91476:CDS |
| ACAAAATCGGTTGCAGTTGC+AGG | 0.358296 | 6.1:-4726866 | MS.gene91476:intron |
| ATCGGAGATAACTGAAGTTT+CGG | 0.358520 | 6.1:-4723047 | MS.gene91476:CDS |
| ATACAAGTTATTCCACTTCA+AGG | 0.362776 | 6.1:-4726741 | MS.gene91476:CDS |
| AGATTTGAACTTTCTTGGTC+TGG | 0.366267 | 6.1:-4724416 | MS.gene91476:CDS |
| TTCAGAACTTTGCACAAAAT+CGG | 0.372685 | 6.1:-4726879 | MS.gene91476:CDS |
| TTTCAAATAATGCATGCATT+AGG | 0.383644 | 6.1:-4726213 | MS.gene91476:CDS |
| TCTCTAAGAGTTTGTATATG+AGG | 0.387618 | 6.1:+4727076 | None:intergenic |
| TTCAATGCTTAAAATTTGTA+AGG | 0.389063 | 6.1:-4725889 | MS.gene91476:intron |
| TGTTTAAGAAGACTTGTTCA+TGG | 0.389874 | 6.1:+4728569 | None:intergenic |
| CAGAGAAAGCAGCTTCCTTT+CGG | 0.391800 | 6.1:-4726284 | MS.gene91476:CDS |
| CAATCTGACCTAACTCCAAA+TGG | 0.392554 | 6.1:+4723127 | None:intergenic |
| TGGAGAATGGCCAAAGTGAT+TGG | 0.399494 | 6.1:-4723162 | MS.gene91476:CDS |
| AGGTTGGATGCCTGTTGACC+TGG | 0.400223 | 6.1:-4725937 | MS.gene91476:CDS |
| GTGGAATAACTTGTATTTGA+AGG | 0.405723 | 6.1:+4726748 | None:intergenic |
| TCAATAAACCTGAACATAGA+TGG | 0.407609 | 6.1:-4723706 | MS.gene91476:CDS |
| TTGTTCCAGTTGATTTCAAA+AGG | 0.410530 | 6.1:+4724661 | None:intergenic |
| GTTGGTTCTTGTATCAATAC+AGG | 0.411516 | 6.1:-4724017 | MS.gene91476:intron |
| CTTCGATCAGCGAATTTCAC+TGG | 0.412249 | 6.1:+4725349 | None:intergenic |
| TGGCTTGATGAAAACCCATT+TGG | 0.414975 | 6.1:-4723142 | MS.gene91476:CDS |
| AAACTCTTAGAGAATTTCCT+AGG | 0.415158 | 6.1:-4727066 | MS.gene91476:CDS |
| GTGGTGGATCTTCTCGCATC+TGG | 0.420031 | 6.1:-4723653 | MS.gene91476:CDS |
| AGGCATACAATTGCTACATA+TGG | 0.421000 | 6.1:+4726435 | None:intergenic |
| GGTTTATTGAAATCAGGGTT+TGG | 0.423467 | 6.1:+4723719 | None:intergenic |
| TTGAGAATGCTTCAGTTGTA+TGG | 0.425529 | 6.1:-4725186 | MS.gene91476:CDS |
| GTTACAGGTCCCAGGTCAAC+AGG | 0.426125 | 6.1:+4725927 | None:intergenic |
| CATTTGGAGTTAGGTCAGAT+TGG | 0.439570 | 6.1:-4723126 | MS.gene91476:CDS |
| AGCATGTCAGCTTGTGAGAC+AGG | 0.443892 | 6.1:-4725239 | MS.gene91476:CDS |
| AGCATTCTCCATCTATGTTC+AGG | 0.447779 | 6.1:+4723698 | None:intergenic |
| ATTTGGAGTTAGGTCAGATT+GGG | 0.448877 | 6.1:-4723125 | MS.gene91476:CDS |
| TTACGGTCCACCAAATCAAT+AGG | 0.453766 | 6.1:+4726180 | None:intergenic |
| GAAAACATCATTCGGTACAT+AGG | 0.457434 | 6.1:+4723076 | None:intergenic |
| GTTCATGGAGAATCTTCATA+AGG | 0.460401 | 6.1:+4728584 | None:intergenic |
| TATGCTAGAGAATTATCTTC+AGG | 0.463431 | 6.1:-4726612 | MS.gene91476:CDS |
| ATTAAATATTTACATGAAGC+CGG | 0.468498 | 6.1:-4726938 | MS.gene91476:CDS |
| AGGTCATCCTGGTCAGTGAT+TGG | 0.478276 | 6.1:-4726910 | MS.gene91476:CDS |
| GTTCAGGTTTATTGAAATCA+GGG | 0.480490 | 6.1:+4723714 | None:intergenic |
| ATGATTTAGAAAACATCATT+CGG | 0.483245 | 6.1:+4723068 | None:intergenic |
| TGACCTGGGACCTGTAACAT+TGG | 0.484621 | 6.1:-4725922 | MS.gene91476:CDS |
| ACAAGTTCCTATTGATTTGG+TGG | 0.489903 | 6.1:-4726187 | MS.gene91476:CDS |
| TTCTTCTTACCCTGGAGAGT+TGG | 0.490193 | 6.1:-4724035 | MS.gene91476:CDS |
| TCTCATACAATTCAGATTGG+AGG | 0.499200 | 6.1:-4726318 | MS.gene91476:intron |
| ATACAGAAAATAATTTGGAT+TGG | 0.500099 | 6.1:-4725373 | MS.gene91476:intron |
| TGGTCTGGAGATGAATGAAA+AGG | 0.508044 | 6.1:-4724401 | MS.gene91476:intron |
| GATAATGGAGGAAAGTTGAA+TGG | 0.508396 | 6.1:-4727103 | MS.gene91476:CDS |
| TTTCATCAAGCCAATCACTT+TGG | 0.511245 | 6.1:+4723152 | None:intergenic |
| GAGCTTCACTAAATGCCTTA+CGG | 0.512317 | 6.1:+4726163 | None:intergenic |
| TATTGATTTGGTGGACCGTA+AGG | 0.513262 | 6.1:-4726178 | MS.gene91476:CDS |
| TGTCAACTCATTCAACCATA+AGG | 0.520513 | 6.1:-4728196 | MS.gene91476:intron |
| AACTGTGAAATAACTGTTGT+TGG | 0.523014 | 6.1:-4725268 | MS.gene91476:CDS |
| GATACAAGAACCAACTCTCC+AGG | 0.523598 | 6.1:+4724025 | None:intergenic |
| AGCAGTTTGACATAAAGAAC+GGG | 0.529749 | 6.1:-4724252 | MS.gene91476:intron |
| TTTCCAAATAGCTCCTCCCT+AGG | 0.531477 | 6.1:+4727049 | None:intergenic |
| GATCGAAGTGAACACACAAA+TGG | 0.533202 | 6.1:-4725334 | MS.gene91476:CDS |
| TTTGCAATCTGATGTGGAAG+AGG | 0.535100 | 6.1:-4723239 | MS.gene91476:CDS |
| CATCCAATGTTACAGGTCCC+AGG | 0.542239 | 6.1:+4725919 | None:intergenic |
| CTATCAAGAGCCAAAACACC+AGG | 0.549378 | 6.1:+4725139 | None:intergenic |
| TGTTCCAGTTGATTTCAAAA+GGG | 0.550382 | 6.1:+4724662 | None:intergenic |
| GTGGATCTTCTCGCATCTGG+TGG | 0.551215 | 6.1:-4723650 | MS.gene91476:CDS |
| GACCAGGATGACCTTTGCTC+CGG | 0.554244 | 6.1:+4726919 | None:intergenic |
| AACTTTATGAGAGTTTGAGA+AGG | 0.556596 | 6.1:+4726566 | None:intergenic |
| TAGATTTACATTGATAATGG+AGG | 0.558111 | 6.1:-4727115 | MS.gene91476:CDS |
| AACTCTTAGAGAATTTCCTA+GGG | 0.558416 | 6.1:-4727065 | MS.gene91476:CDS |
| CTTGTGGTTGATATTGGAAG+TGG | 0.560186 | 6.1:-4724613 | MS.gene91476:intron |
| ATCCTTAATTGAAGCAGTGG+TGG | 0.560400 | 6.1:-4723669 | MS.gene91476:CDS |
| AATCTGACCTAACTCCAAAT+GGG | 0.561481 | 6.1:+4723128 | None:intergenic |
| TCAATCGTTTCTTCTTACCC+TGG | 0.565462 | 6.1:-4724043 | MS.gene91476:CDS |
| CTCAAAGGAAGAAAGCTCCC+TGG | 0.567863 | 6.1:-4725157 | MS.gene91476:CDS |
| AGCCGGAGCAAAGGTCATCC+TGG | 0.571711 | 6.1:-4726921 | MS.gene91476:CDS |
| GGTTGGATGCCTGTTGACCT+GGG | 0.574734 | 6.1:-4725936 | MS.gene91476:CDS |
| CATACAATTCAGATTGGAGG+CGG | 0.578134 | 6.1:-4726315 | MS.gene91476:intron |
| TGAGAATGCTTCAGTTGTAT+GGG | 0.586649 | 6.1:-4725185 | MS.gene91476:CDS |
| GTTGTATGGGAATTTCTCAA+AGG | 0.594111 | 6.1:-4725172 | MS.gene91476:CDS |
| TTTCAATCTAGTGAATTGGA+TGG | 0.594154 | 6.1:-4728611 | MS.gene91476:CDS |
| TCTTCTCGCATCTGGTGGAA+AGG | 0.597064 | 6.1:-4723645 | MS.gene91476:intron |
| CGACACAACTCAATCTCTTG+TGG | 0.598567 | 6.1:-4724629 | MS.gene91476:CDS |
| ATTCTTGATCAACTAGGCAA+AGG | 0.599366 | 6.1:-4725292 | MS.gene91476:CDS |
| CAGCAGTTTGACATAAAGAA+CGG | 0.600446 | 6.1:-4724253 | MS.gene91476:CDS |
| TTTACATGAAGCCGGAGCAA+AGG | 0.603305 | 6.1:-4726930 | MS.gene91476:CDS |
| GAGATCCTTAATTGAAGCAG+TGG | 0.605586 | 6.1:-4723672 | MS.gene91476:CDS |
| GGTTTGTCCAATCACTGACC+AGG | 0.610231 | 6.1:+4726903 | None:intergenic |
| TCTTAGAGAATTTCCTAGGG+AGG | 0.612761 | 6.1:-4727062 | MS.gene91476:CDS |
| ATACAAGAACCAACTCTCCA+GGG | 0.618263 | 6.1:+4724026 | None:intergenic |
| AACAAAACCCTGACATCTGG+AGG | 0.622684 | 6.1:+4726254 | None:intergenic |
| CCATCCAAAAGTCCATGAGA+AGG | 0.625113 | 6.1:+4726039 | None:intergenic |
| GGTGCTCTATTGGCTATGCA+AGG | 0.635323 | 6.1:-4728460 | MS.gene91476:intron |
| AAAGTTCTAGCATCAACTGT+CGG | 0.655580 | 6.1:-4726549 | MS.gene91476:CDS |
| GCTATTTGGAAAAGTCGTCA+TGG | 0.659882 | 6.1:-4727038 | MS.gene91476:CDS |
| TATCAAGAGCCAAAACACCA+GGG | 0.722460 | 6.1:+4725140 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAATTTGATTATAAATTT+TGG | - | chr6.1:4725800-4725819 | MS.gene91476:intron | 10.0% |
| !!! | AGATTTAATTAAATTTTGAA+GGG | - | chr6.1:4723944-4723963 | MS.gene91476:intron | 10.0% |
| !!! | ATATTTTCATTTTAAGATAA+TGG | - | chr6.1:4726167-4726186 | MS.gene91476:CDS | 10.0% |
| !! | AACAGATAAAGAATAAAAAA+AGG | + | chr6.1:4723347-4723366 | None:intergenic | 15.0% |
| !! | AGATAATCACTTATTTAATA+TGG | + | chr6.1:4724831-4724850 | None:intergenic | 15.0% |
| !! | ATATAAACTATATTACCTTA+TGG | + | chr6.1:4723448-4723467 | None:intergenic | 15.0% |
| !! | ATCAAATACAGAAAATAATT+TGG | - | chr6.1:4726248-4726267 | MS.gene91476:CDS | 15.0% |
| !!! | AATCGATCAAATTTTATTAT+CGG | + | chr6.1:4725655-4725674 | None:intergenic | 15.0% |
| !!! | AATTTGATTATAAATTTTGG+CGG | - | chr6.1:4725803-4725822 | MS.gene91476:intron | 15.0% |
| !!! | GAGATTTAATTAAATTTTGA+AGG | - | chr6.1:4723943-4723962 | MS.gene91476:intron | 15.0% |
| !!! | TAATTGATGTTATTTTTTAC+AGG | - | chr6.1:4723383-4723402 | MS.gene91476:intron | 15.0% |
| !!! | TTTATGATATTTTACCTTTA+AGG | - | chr6.1:4723841-4723860 | MS.gene91476:intron | 15.0% |
| !!! | TTTCTTGATTTATCTATTTT+AGG | - | chr6.1:4727524-4727543 | MS.gene91476:intron | 15.0% |
| !! | AAGGTAAAATATCATAAACA+AGG | + | chr6.1:4723839-4723858 | None:intergenic | 20.0% |
| !! | AATATATGGTTAATTAGGTT+CGG | - | chr6.1:4725836-4725855 | MS.gene91476:intron | 20.0% |
| !! | AATATCATAACATAAGATTG+TGG | + | chr6.1:4723483-4723502 | None:intergenic | 20.0% |
| !! | AATATTCAAAGAATACAAGT+TGG | + | chr6.1:4728314-4728333 | None:intergenic | 20.0% |
| !! | ATAATAAATGCGATAATACT+TGG | - | chr6.1:4723528-4723547 | MS.gene91476:intron | 20.0% |
| !! | ATACAGAAAATAATTTGGAT+TGG | - | chr6.1:4726253-4726272 | MS.gene91476:CDS | 20.0% |
| !! | ATGATTTAGAAAACATCATT+CGG | + | chr6.1:4728561-4728580 | None:intergenic | 20.0% |
| !! | ATTAAATATTTACATGAAGC+CGG | - | chr6.1:4724688-4724707 | MS.gene91476:intron | 20.0% |
| !! | ATTCAAAGAATAAAGTTAGA+TGG | + | chr6.1:4726230-4726249 | None:intergenic | 20.0% |
| !! | GTCAAATTTCAGAAATATAA+TGG | - | chr6.1:4723145-4723164 | MS.gene91476:CDS | 20.0% |
| !! | GTTCAAATATATGGTTAATT+AGG | - | chr6.1:4725831-4725850 | MS.gene91476:intron | 20.0% |
| !! | TATTATTTGAGCATCAATTT+AGG | + | chr6.1:4724347-4724366 | None:intergenic | 20.0% |
| !! | TGAAACAATTGTATACTATA+AGG | + | chr6.1:4723762-4723781 | None:intergenic | 20.0% |
| !! | TGAATTGTATGAGAAATAAA+CGG | + | chr6.1:4725302-4725321 | None:intergenic | 20.0% |
| !! | TGTTAGATTTACATTGATAA+TGG | - | chr6.1:4724508-4724527 | MS.gene91476:intron | 20.0% |
| !! | TTATAGTATACAATTGTTTC+AGG | - | chr6.1:4723761-4723780 | MS.gene91476:intron | 20.0% |
| !! | TTCAATGCTTAAAATTTGTA+AGG | - | chr6.1:4725737-4725756 | MS.gene91476:intron | 20.0% |
| !! | TTCATTGTCTTCTATAAATA+TGG | - | chr6.1:4726417-4726436 | MS.gene91476:intron | 20.0% |
| !! | TTTAATTAAATCTCAACACA+AGG | + | chr6.1:4723937-4723956 | None:intergenic | 20.0% |
| !! | TTTATTAGAATGAAAATGAG+AGG | - | chr6.1:4723650-4723669 | MS.gene91476:CDS | 20.0% |
| !!! | AATGATGTTTTCTAAATCAT+CGG | - | chr6.1:4728561-4728580 | MS.gene91476:CDS | 20.0% |
| !!! | AATTAAATTTTGAAGGGTTA+GGG | - | chr6.1:4723950-4723969 | MS.gene91476:intron | 20.0% |
| !!! | AATTTGATCGATTTTTATCT+TGG | - | chr6.1:4725662-4725681 | MS.gene91476:intron | 20.0% |
| !!! | ATGTTATTTTTTACAGGAAA+TGG | - | chr6.1:4723389-4723408 | MS.gene91476:intron | 20.0% |
| !!! | TAATTAAATTTTGAAGGGTT+AGG | - | chr6.1:4723949-4723968 | MS.gene91476:intron | 20.0% |
| !!! | TATTGTATCCAAAAGATTTT+TGG | - | chr6.1:4725525-4725544 | MS.gene91476:intron | 20.0% |
| !!! | TTTTGGTTTAATAGTCATTT+TGG | - | chr6.1:4723213-4723232 | MS.gene91476:CDS | 20.0% |
| ! | AAATATCAGTGTTCAAATTC+TGG | + | chr6.1:4726130-4726149 | None:intergenic | 25.0% |
| ! | AGAAAAGATTTGAACTTTCT+TGG | - | chr6.1:4727205-4727224 | MS.gene91476:intron | 25.0% |
| ! | ATAAAGGCAAAATGAAGATT+AGG | + | chr6.1:4727874-4727893 | None:intergenic | 25.0% |
| ! | ATAAATGCTTCAATCAACTT+GGG | - | chr6.1:4725629-4725648 | MS.gene91476:intron | 25.0% |
| ! | ATATTTCTTCCTATCCTTAA+AGG | + | chr6.1:4723858-4723877 | None:intergenic | 25.0% |
| ! | ATCTAGCATCTTAATATTTC+AGG | + | chr6.1:4724178-4724197 | None:intergenic | 25.0% |
| ! | ATTTCTCATACAATTCAGAT+TGG | - | chr6.1:4725305-4725324 | MS.gene91476:CDS | 25.0% |
| ! | ATTTCTGATAAGAATCCTAT+AGG | + | chr6.1:4724858-4724877 | None:intergenic | 25.0% |
| ! | CAACAATTTACCAAAAAAGT+TGG | + | chr6.1:4726848-4726867 | None:intergenic | 25.0% |
| ! | TATGCAAAATTCAAGATTTC+CGG | + | chr6.1:4726760-4726779 | None:intergenic | 25.0% |
| ! | TCAAAAATTCTTGATCAACT+AGG | - | chr6.1:4726328-4726347 | MS.gene91476:intron | 25.0% |
| ! | TGAAACATTATTAACCATGT+GGG | - | chr6.1:4724281-4724300 | MS.gene91476:CDS | 25.0% |
| ! | TGAATCATTATCCAGAAATA+TGG | + | chr6.1:4726538-4726557 | None:intergenic | 25.0% |
| ! | TTATTACAGTAAACTCAATC+TGG | + | chr6.1:4727805-4727824 | None:intergenic | 25.0% |
| ! | TTTAAAAAGTCGTCGAATTT+AGG | - | chr6.1:4724318-4724337 | MS.gene91476:intron | 25.0% |
| ! | TTTAAACTGCTTCAATCTTA+TGG | - | chr6.1:4726920-4726939 | MS.gene91476:CDS | 25.0% |
| ! | TTTCAAATAATGCATGCATT+AGG | - | chr6.1:4725413-4725432 | MS.gene91476:intron | 25.0% |
| !! | AAATTCGACGACTTTTTAAA+TGG | + | chr6.1:4724318-4724337 | None:intergenic | 25.0% |
| !! | ACTATTTTACTCCATATTTC+TGG | - | chr6.1:4726524-4726543 | MS.gene91476:CDS | 25.0% |
| !! | GCTAATGAAGTTTAAAATCT+CGG | + | chr6.1:4725924-4725943 | None:intergenic | 25.0% |
| !! | GTTTTATGTTTAAGCAACTT+GGG | + | chr6.1:4723103-4723122 | None:intergenic | 25.0% |
| !! | TATGAACAAACCGATATTTT+CGG | - | chr6.1:4724119-4724138 | MS.gene91476:intron | 25.0% |
| !! | TGTTTTATGTTTAAGCAACT+TGG | + | chr6.1:4723104-4723123 | None:intergenic | 25.0% |
| !! | TTTCATTTGACTTTGTGAAA+TGG | + | chr6.1:4726202-4726221 | None:intergenic | 25.0% |
| !! | TTTTATGTTTAAGCAACTTG+GGG | + | chr6.1:4723102-4723121 | None:intergenic | 25.0% |
| !!! | ACTTTACTTATGTTGCTTTT+TGG | - | chr6.1:4723196-4723215 | MS.gene91476:CDS | 25.0% |
| !!! | GATATTTTACCTTTAAGGAT+AGG | - | chr6.1:4723846-4723865 | MS.gene91476:intron | 25.0% |
| !!! | TAATGTTGTTGCTTTCATAT+AGG | - | chr6.1:4727397-4727416 | MS.gene91476:intron | 25.0% |
| !!! | TACAAAGTATTGTCAAATAG+TGG | - | chr6.1:4728138-4728157 | MS.gene91476:intron | 25.0% |
| !!! | TAGATTTACATTGATAATGG+AGG | - | chr6.1:4724511-4724530 | MS.gene91476:intron | 25.0% |
| !!! | TTCTGAAATTTGACAACTTT+TGG | + | chr6.1:4723139-4723158 | None:intergenic | 25.0% |
| !!! | TTTGCTGTATATTTTTGTTC+TGG | - | chr6.1:4724464-4724483 | MS.gene91476:intron | 25.0% |
| !!! | TTTTAGTCTTTGTATCAAAG+CGG | + | chr6.1:4724151-4724170 | None:intergenic | 25.0% |
| AAACTCTTAGAGAATTTCCT+AGG | - | chr6.1:4724560-4724579 | MS.gene91476:intron | 30.0% | |
| AACTCTTAGAGAATTTCCTA+GGG | - | chr6.1:4724561-4724580 | MS.gene91476:intron | 30.0% | |
| AACTGTGAAATAACTGTTGT+TGG | - | chr6.1:4726358-4726377 | MS.gene91476:intron | 30.0% | |
| AACTTTATGAGAGTTTGAGA+AGG | + | chr6.1:4725063-4725082 | None:intergenic | 30.0% | |
| ACTGTTATTGTTCTGTGATA+CGG | - | chr6.1:4728108-4728127 | MS.gene91476:intron | 30.0% | |
| AGTGATTATCTCTATCCTAT+AGG | - | chr6.1:4724840-4724859 | MS.gene91476:intron | 30.0% | |
| ATAAGATTGTGGCACAAAAA+AGG | + | chr6.1:4723472-4723491 | None:intergenic | 30.0% | |
| ATACAAGTTATTCCACTTCA+AGG | - | chr6.1:4724885-4724904 | MS.gene91476:intron | 30.0% | |
| ATGCATCATGTAAGGATATT+AGG | - | chr6.1:4723698-4723717 | MS.gene91476:CDS | 30.0% | |
| ATTTGATCCATCTATATCAC+AGG | + | chr6.1:4727745-4727764 | None:intergenic | 30.0% | |
| CATAAATGCTTCAATCAACT+TGG | - | chr6.1:4725628-4725647 | MS.gene91476:intron | 30.0% | |
| CTGAAACATTATTAACCATG+TGG | - | chr6.1:4724280-4724299 | MS.gene91476:CDS | 30.0% | |
| GAAACATTATTAACCATGTG+GGG | - | chr6.1:4724282-4724301 | MS.gene91476:CDS | 30.0% | |
| GAAATATAATGGTGCTCTAT+TGG | - | chr6.1:4723156-4723175 | MS.gene91476:CDS | 30.0% | |
| GTTAATAATGTTTCAGCACA+AGG | + | chr6.1:4724276-4724295 | None:intergenic | 30.0% | |
| TAAGAGGAACAAGTAACATA+AGG | + | chr6.1:4727128-4727147 | None:intergenic | 30.0% | |
| TAGTATACAATTGTTTCAGG+AGG | - | chr6.1:4723764-4723783 | MS.gene91476:intron | 30.0% | |
| TATGCTAGAGAATTATCTTC+AGG | - | chr6.1:4725014-4725033 | MS.gene91476:intron | 30.0% | |
| TCAATAAACCTGAACATAGA+TGG | - | chr6.1:4727920-4727939 | MS.gene91476:intron | 30.0% | |
| TGAAAAGCTCAAATGTTAAG+AGG | + | chr6.1:4727144-4727163 | None:intergenic | 30.0% | |
| TGCTACATATGGTTTCTTAT+TGG | + | chr6.1:4725183-4725202 | None:intergenic | 30.0% | |
| TGGACACTGCAAAAAAATAA+AGG | + | chr6.1:4727890-4727909 | None:intergenic | 30.0% | |
| TTAGATTCTCAACATTGATC+AGG | - | chr6.1:4728360-4728379 | MS.gene91476:intron | 30.0% | |
| TTCAGAACTTTGCACAAAAT+CGG | - | chr6.1:4724747-4724766 | MS.gene91476:intron | 30.0% | |
| TTCTTCTTGAAATGGCAAAA+AGG | - | chr6.1:4727182-4727201 | MS.gene91476:intron | 30.0% | |
| TTTCAATCTAGTGAATTGGA+TGG | - | chr6.1:4723015-4723034 | MS.gene91476:CDS | 30.0% | |
| ! | ACACTTTCTTTTCGTAAACA+AGG | - | chr6.1:4723903-4723922 | MS.gene91476:intron | 30.0% |
| ! | AGTACAAGTTCCTATTGATT+TGG | - | chr6.1:4725436-4725455 | MS.gene91476:intron | 30.0% |
| ! | ATATCTGCGATTGATAATAC+CGG | - | chr6.1:4726738-4726757 | MS.gene91476:CDS | 30.0% |
| ! | ATATTGTTGTTACTCTCACT+TGG | - | chr6.1:4723874-4723893 | MS.gene91476:intron | 30.0% |
| ! | ATTTGACTTTGTGAAATGGA+AGG | + | chr6.1:4726198-4726217 | None:intergenic | 30.0% |
| ! | CTTTAGTAAATGATGGAGAA+AGG | + | chr6.1:4727851-4727870 | None:intergenic | 30.0% |
| ! | GATTAGGCTTTAGTAAATGA+TGG | + | chr6.1:4727858-4727877 | None:intergenic | 30.0% |
| ! | GGAAAAACATGCAATTGTTT+TGG | + | chr6.1:4725569-4725588 | None:intergenic | 30.0% |
| ! | GTGGAATAACTTGTATTTGA+AGG | + | chr6.1:4724881-4724900 | None:intergenic | 30.0% |
| ! | GTTCAGGTTTATTGAAATCA+GGG | + | chr6.1:4727915-4727934 | None:intergenic | 30.0% |
| ! | TCGATTTTTATCTTGGATCT+AGG | - | chr6.1:4725669-4725688 | MS.gene91476:intron | 30.0% |
| ! | TCTCTAAGAGTTTGTATATG+AGG | + | chr6.1:4724553-4724572 | None:intergenic | 30.0% |
| ! | TGAAATCTGATTGATTCTTC+TGG | + | chr6.1:4724654-4724673 | None:intergenic | 30.0% |
| ! | TGTTCAGGTTTATTGAAATC+AGG | + | chr6.1:4727916-4727935 | None:intergenic | 30.0% |
| ! | TGTTCCAGTTGATTTCAAAA+GGG | + | chr6.1:4726967-4726986 | None:intergenic | 30.0% |
| ! | TGTTTAAGAAGACTTGTTCA+TGG | + | chr6.1:4723060-4723079 | None:intergenic | 30.0% |
| ! | TTATGGTAGTCATATTTTGC+AGG | - | chr6.1:4726937-4726956 | MS.gene91476:CDS | 30.0% |
| ! | TTGTTCCAGTTGATTTCAAA+AGG | + | chr6.1:4726968-4726987 | None:intergenic | 30.0% |
| ! | TTTTTATCTTGGATCTAGGT+TGG | - | chr6.1:4725673-4725692 | MS.gene91476:intron | 30.0% |
| !! | TGGACTTTTTCTTCTTGAAA+TGG | - | chr6.1:4727174-4727193 | MS.gene91476:intron | 30.0% |
| !! | TTGCAAATGTAAGCTTGTTT+TGG | - | chr6.1:4728444-4728463 | MS.gene91476:intron | 30.0% |
| !!! | AAAAACATGTTTTAGAGCGT+GGG | - | chr6.1:4728524-4728543 | MS.gene91476:CDS | 30.0% |
| !!! | ATTTTGTGCAAAGTTCTGAA+GGG | + | chr6.1:4724747-4724766 | None:intergenic | 30.0% |
| AAAAACAAAACCCTGACATC+TGG | + | chr6.1:4725378-4725397 | None:intergenic | 35.0% | |
| AACTGCTTCAACCATCTAAA+TGG | - | chr6.1:4725954-4725973 | MS.gene91476:intron | 35.0% | |
| AATCTGACCTAACTCCAAAT+GGG | + | chr6.1:4728501-4728520 | None:intergenic | 35.0% | |
| ACAAGCTGAAAACAAACCAA+CGG | + | chr6.1:4727331-4727350 | None:intergenic | 35.0% | |
| ACATACTCTATCTGTCATCA+TGG | - | chr6.1:4723722-4723741 | MS.gene91476:CDS | 35.0% | |
| ACGATTTCAATTGACAACAC+TGG | - | chr6.1:4728218-4728237 | MS.gene91476:CDS | 35.0% | |
| ACTATAACTCTATAGCGTAG+CGG | - | chr6.1:4728075-4728094 | MS.gene91476:intron | 35.0% | |
| AGATTTGAACTTTCTTGGTC+TGG | - | chr6.1:4727210-4727229 | MS.gene91476:intron | 35.0% | |
| AGCAGTTTGACATAAAGAAC+GGG | - | chr6.1:4727374-4727393 | MS.gene91476:intron | 35.0% | |
| AGGCATACAATTGCTACATA+TGG | + | chr6.1:4725194-4725213 | None:intergenic | 35.0% | |
| AGTGTCTTACACATTCATTC+AGG | - | chr6.1:4723302-4723321 | MS.gene91476:intron | 35.0% | |
| ATAACAAAGATGCGTGTGAA+GGG | - | chr6.1:4723574-4723593 | MS.gene91476:intron | 35.0% | |
| ATCGGAGATAACTGAAGTTT+CGG | - | chr6.1:4728579-4728598 | MS.gene91476:CDS | 35.0% | |
| ATCTGTTCTGTAAACATCAG+TGG | - | chr6.1:4726558-4726577 | MS.gene91476:CDS | 35.0% | |
| ATTCTTGATCAACTAGGCAA+AGG | - | chr6.1:4726334-4726353 | MS.gene91476:intron | 35.0% | |
| CAGCAGTTTGACATAAAGAA+CGG | - | chr6.1:4727373-4727392 | MS.gene91476:intron | 35.0% | |
| CCAATTTCATCCAATGTTAC+AGG | + | chr6.1:4725717-4725736 | None:intergenic | 35.0% | |
| CCTGTAACATTGGATGAAAT+TGG | - | chr6.1:4725714-4725733 | MS.gene91476:intron | 35.0% | |
| GAAAACATCATTCGGTACAT+AGG | + | chr6.1:4728553-4728572 | None:intergenic | 35.0% | |
| GAACGAAAATGCATCATGTA+AGG | - | chr6.1:4723690-4723709 | MS.gene91476:CDS | 35.0% | |
| GAATGAATGTGTAAGACACT+TGG | + | chr6.1:4723302-4723321 | None:intergenic | 35.0% | |
| GACAAGCTATCAGAGATTAA+AGG | - | chr6.1:4724918-4724937 | MS.gene91476:intron | 35.0% | |
| GACTTTGACAACCATTTAGA+TGG | + | chr6.1:4725968-4725987 | None:intergenic | 35.0% | |
| GGTTTATTGAAATCAGGGTT+TGG | + | chr6.1:4727910-4727929 | None:intergenic | 35.0% | |
| GTCAATGTGTTGTCAAATAG+TGG | - | chr6.1:4726079-4726098 | MS.gene91476:CDS | 35.0% | |
| GTCACATTTCTTAGCAACTT+AGG | - | chr6.1:4723811-4723830 | MS.gene91476:intron | 35.0% | |
| GTGTCTTACACATTCATTCA+GGG | - | chr6.1:4723303-4723322 | MS.gene91476:intron | 35.0% | |
| GTTCATGGAGAATCTTCATA+AGG | + | chr6.1:4723045-4723064 | None:intergenic | 35.0% | |
| GTTGTATGGGAATTTCTCAA+AGG | - | chr6.1:4726454-4726473 | MS.gene91476:CDS | 35.0% | |
| TAATGCTATAACAGCAGAAG+AGG | + | chr6.1:4725214-4725233 | None:intergenic | 35.0% | |
| TCATACAAAAAGCCTTGAAG+TGG | + | chr6.1:4724900-4724919 | None:intergenic | 35.0% | |
| TCTATCGATATGAGAACTTG+AGG | + | chr6.1:4725271-4725290 | None:intergenic | 35.0% | |
| TCTCATACAATTCAGATTGG+AGG | - | chr6.1:4725308-4725327 | MS.gene91476:CDS | 35.0% | |
| TCTTAGTCCTGTGATATAGA+TGG | - | chr6.1:4727735-4727754 | MS.gene91476:intron | 35.0% | |
| TGAGAATGCTTCAGTTGTAT+GGG | - | chr6.1:4726441-4726460 | MS.gene91476:intron | 35.0% | |
| TGTCAACTCATTCAACCATA+AGG | - | chr6.1:4723430-4723449 | MS.gene91476:intron | 35.0% | |
| TGTTCAAATTTCGACGACAT+TGG | + | chr6.1:4726025-4726044 | None:intergenic | 35.0% | |
| TTGAGAATGCTTCAGTTGTA+TGG | - | chr6.1:4726440-4726459 | MS.gene91476:intron | 35.0% | |
| TTTCATCAAGCCAATCACTT+TGG | + | chr6.1:4728477-4728496 | None:intergenic | 35.0% | |
| ! | AAAGTTCTAGCATCAACTGT+CGG | - | chr6.1:4725077-4725096 | MS.gene91476:intron | 35.0% |
| ! | ACATTTGAGCTTTTCATGAC+AGG | - | chr6.1:4727148-4727167 | MS.gene91476:intron | 35.0% |
| ! | ATGAAAACCCATTTGGAGTT+AGG | - | chr6.1:4728491-4728510 | MS.gene91476:CDS | 35.0% |
| ! | ATTTGGAGTTAGGTCAGATT+GGG | - | chr6.1:4728501-4728520 | MS.gene91476:CDS | 35.0% |
| ! | CAATCTCTTGTGGTTGATAT+TGG | - | chr6.1:4727007-4727026 | MS.gene91476:CDS | 35.0% |
| ! | GTTGGTTCTTGTATCAATAC+AGG | - | chr6.1:4727609-4727628 | MS.gene91476:intron | 35.0% |
| ! | TTCCTGCACCAAAAATCTTT+TGG | + | chr6.1:4725536-4725555 | None:intergenic | 35.0% |
| ! | TTGCATGTTTTTCCTTCTCA+TGG | - | chr6.1:4725575-4725594 | MS.gene91476:intron | 35.0% |
| ! | TTTTCCTTCTCATGGACTTT+TGG | - | chr6.1:4725583-4725602 | MS.gene91476:intron | 35.0% |
| !! | ACAAGTTCCTATTGATTTGG+TGG | - | chr6.1:4725439-4725458 | MS.gene91476:intron | 35.0% |
| !! | GATAATGGAGGAAAGTTGAA+TGG | - | chr6.1:4724523-4724542 | MS.gene91476:intron | 35.0% |
| !! | GATTTTGTGCAAAGTTCTGA+AGG | + | chr6.1:4724748-4724767 | None:intergenic | 35.0% |
| !! | TGTTCTGGCTCTAAGTATTA+TGG | - | chr6.1:4724479-4724498 | MS.gene91476:intron | 35.0% |
| !!! | AAAACATGTTTTAGAGCGTG+GGG | - | chr6.1:4728525-4728544 | MS.gene91476:CDS | 35.0% |
| !!! | ATCCAAAAGATTTTTGGTGC+AGG | - | chr6.1:4725531-4725550 | MS.gene91476:intron | 35.0% |
| !!! | CAATTGACAACACTGGTTTT+CGG | - | chr6.1:4728225-4728244 | MS.gene91476:intron | 35.0% |
| !!! | CATACCCTTTTGAAATCAAC+TGG | - | chr6.1:4726960-4726979 | MS.gene91476:CDS | 35.0% |
| !!! | GAAAAACATGTTTTAGAGCG+TGG | - | chr6.1:4728523-4728542 | MS.gene91476:CDS | 35.0% |
| !!! | TGTAAGCTTGTTTTGGAGAA+TGG | - | chr6.1:4728451-4728470 | MS.gene91476:intron | 35.0% |
| !!! | TGTCAGGGTTTTGTTTTTGT+TGG | - | chr6.1:4725380-4725399 | MS.gene91476:intron | 35.0% |
| AAAGTGTACCGCAGAAAGTA+GGG | + | chr6.1:4726643-4726662 | None:intergenic | 40.0% | |
| AATACTGTTATGCGATAGCG+CGG | + | chr6.1:4724016-4724035 | None:intergenic | 40.0% | |
| ACAGGAAATGGAGAGTTAAC+AGG | - | chr6.1:4723401-4723420 | MS.gene91476:intron | 40.0% | |
| ACAGGACTAAGATGCTGAAA+TGG | + | chr6.1:4727727-4727746 | None:intergenic | 40.0% | |
| ACATCATGCCTAAGTCCAAA+GGG | + | chr6.1:4724229-4724248 | None:intergenic | 40.0% | |
| AGCAAAAAAGGCTAGGAACA+AGG | + | chr6.1:4727274-4727293 | None:intergenic | 40.0% | |
| AGCATTCTCCATCTATGTTC+AGG | + | chr6.1:4727931-4727950 | None:intergenic | 40.0% | |
| AGTGAAGAGGGAAGCAAAAA+AGG | + | chr6.1:4727286-4727305 | None:intergenic | 40.0% | |
| AGTTGCAGGTACATTCGTAA+GGG | - | chr6.1:4724774-4724793 | MS.gene91476:intron | 40.0% | |
| ATACAAGAACCAACTCTCCA+GGG | + | chr6.1:4727603-4727622 | None:intergenic | 40.0% | |
| ATCCACCACTGCTTCAATTA+AGG | + | chr6.1:4727962-4727981 | None:intergenic | 40.0% | |
| ATCCTTAATTGAAGCAGTGG+TGG | - | chr6.1:4727957-4727976 | MS.gene91476:intron | 40.0% | |
| ATCGCAATGATCGTCGTTAT+CGG | - | chr6.1:4724401-4724420 | MS.gene91476:intron | 40.0% | |
| CAATCTGACCTAACTCCAAA+TGG | + | chr6.1:4728502-4728521 | None:intergenic | 40.0% | |
| CATAACAAAGATGCGTGTGA+AGG | - | chr6.1:4723573-4723592 | MS.gene91476:intron | 40.0% | |
| CATACAATTCAGATTGGAGG+CGG | - | chr6.1:4725311-4725330 | MS.gene91476:CDS | 40.0% | |
| CTGGTACACTAGTACTATAG+CGG | + | chr6.1:4726111-4726130 | None:intergenic | 40.0% | |
| CTTGTGTCGCAGAATAATAG+TGG | + | chr6.1:4724046-4724065 | None:intergenic | 40.0% | |
| GAGATCCTTAATTGAAGCAG+TGG | - | chr6.1:4727954-4727973 | MS.gene91476:intron | 40.0% | |
| GAGCTTCACTAAATGCCTTA+CGG | + | chr6.1:4725466-4725485 | None:intergenic | 40.0% | |
| GATCGAAGTGAACACACAAA+TGG | - | chr6.1:4726292-4726311 | MS.gene91476:CDS | 40.0% | |
| GCAGTTATAGCACTATAACG+TGG | - | chr6.1:4724091-4724110 | MS.gene91476:intron | 40.0% | |
| GCGGATATGACCGAAAATAT+CGG | + | chr6.1:4724132-4724151 | None:intergenic | 40.0% | |
| GCGGCAAGAGTTCAAATATA+TGG | - | chr6.1:4725822-4725841 | MS.gene91476:intron | 40.0% | |
| GCTATTTGGAAAAGTCGTCA+TGG | - | chr6.1:4724588-4724607 | MS.gene91476:intron | 40.0% | |
| GTTATAGCACTATAACGTGG+CGG | - | chr6.1:4724094-4724113 | MS.gene91476:intron | 40.0% | |
| GTTGAAGCAGTTCAAATGTG+TGG | + | chr6.1:4725946-4725965 | None:intergenic | 40.0% | |
| TATCAAGAGCCAAAACACCA+GGG | + | chr6.1:4726489-4726508 | None:intergenic | 40.0% | |
| TCAATCGTTTCTTCTTACCC+TGG | - | chr6.1:4727583-4727602 | MS.gene91476:intron | 40.0% | |
| TCTTAGAGAATTTCCTAGGG+AGG | - | chr6.1:4724564-4724583 | MS.gene91476:intron | 40.0% | |
| TGGCTTGATGAAAACCCATT+TGG | - | chr6.1:4728484-4728503 | MS.gene91476:CDS | 40.0% | |
| TGGTCTGGAGATGAATGAAA+AGG | - | chr6.1:4727225-4727244 | MS.gene91476:intron | 40.0% | |
| TTACGGTCCACCAAATCAAT+AGG | + | chr6.1:4725449-4725468 | None:intergenic | 40.0% | |
| TTTGAAGGGTTAGGGTGATA+AGG | - | chr6.1:4723958-4723977 | MS.gene91476:intron | 40.0% | |
| TTTGCAATCTGATGTGGAAG+AGG | - | chr6.1:4728387-4728406 | MS.gene91476:intron | 40.0% | |
| ! | AAAAGTGTACCGCAGAAAGT+AGG | + | chr6.1:4726644-4726663 | None:intergenic | 40.0% |
| ! | CACACGCATCTTTGTTATGT+TGG | + | chr6.1:4723572-4723591 | None:intergenic | 40.0% |
| ! | CATTTGGAGTTAGGTCAGAT+TGG | - | chr6.1:4728500-4728519 | MS.gene91476:CDS | 40.0% |
| ! | CTTGTGGTTGATATTGGAAG+TGG | - | chr6.1:4727013-4727032 | MS.gene91476:CDS | 40.0% |
| ! | GGTCTTTTTGCAATCTGATG+TGG | - | chr6.1:4728381-4728400 | MS.gene91476:intron | 40.0% |
| !! | TATTGATTTGGTGGACCGTA+AGG | - | chr6.1:4725448-4725467 | MS.gene91476:intron | 40.0% |
| !! | TTTTTAGCCTCCAGATGTCA+GGG | - | chr6.1:4725365-4725384 | MS.gene91476:CDS | 40.0% |
| AAAAGGCTAGGAACAAGGCA+TGG | + | chr6.1:4727269-4727288 | None:intergenic | 45.0% | |
| AAAGAGTTGTAGCGCCACTA+TGG | + | chr6.1:4726597-4726616 | None:intergenic | 45.0% | |
| AAAGGCTAGGAACAAGGCAT+GGG | + | chr6.1:4727268-4727287 | None:intergenic | 45.0% | |
| AACAAAACCCTGACATCTGG+AGG | + | chr6.1:4725375-4725394 | None:intergenic | 45.0% | |
| ACAAAATCGGTTGCAGTTGC+AGG | - | chr6.1:4724760-4724779 | MS.gene91476:intron | 45.0% | |
| AGAGGGAAGCAAAAAAGGCT+AGG | + | chr6.1:4727281-4727300 | None:intergenic | 45.0% | |
| CACATCATGCCTAAGTCCAA+AGG | + | chr6.1:4724230-4724249 | None:intergenic | 45.0% | |
| CAGAGAAAGCAGCTTCCTTT+CGG | - | chr6.1:4725342-4725361 | MS.gene91476:CDS | 45.0% | |
| CAGTTGCAGGTACATTCGTA+AGG | - | chr6.1:4724773-4724792 | MS.gene91476:intron | 45.0% | |
| CCATCCAAAAGTCCATGAGA+AGG | + | chr6.1:4725590-4725609 | None:intergenic | 45.0% | |
| CGACACAACTCAATCTCTTG+TGG | - | chr6.1:4726997-4727016 | MS.gene91476:CDS | 45.0% | |
| CGTCAACGGAGATGTATGAT+TGG | + | chr6.1:4727695-4727714 | None:intergenic | 45.0% | |
| CTATCAAGAGCCAAAACACC+AGG | + | chr6.1:4726490-4726509 | None:intergenic | 45.0% | |
| CTTCGATCAGCGAATTTCAC+TGG | + | chr6.1:4726280-4726299 | None:intergenic | 45.0% | |
| GACTGCGCAATACACATTCA+GGG | + | chr6.1:4723240-4723259 | None:intergenic | 45.0% | |
| GAGCAAATCCCTACTTTCTG+CGG | - | chr6.1:4726632-4726651 | MS.gene91476:CDS | 45.0% | |
| GATACAAGAACCAACTCTCC+AGG | + | chr6.1:4727604-4727623 | None:intergenic | 45.0% | |
| GCCATCTGCGAAAATTCTAC+TGG | + | chr6.1:4726826-4726845 | None:intergenic | 45.0% | |
| GGACTAAGATGCTGAAATGG+TGG | + | chr6.1:4727724-4727743 | None:intergenic | 45.0% | |
| GGCATGGGATGTAACAAGTA+TGG | + | chr6.1:4727253-4727272 | None:intergenic | 45.0% | |
| GGTGATAAGGATGTAACTCC+TGG | - | chr6.1:4723971-4723990 | MS.gene91476:intron | 45.0% | |
| GTGTCAAATAGCTGCCATAG+TGG | - | chr6.1:4726580-4726599 | MS.gene91476:CDS | 45.0% | |
| TATTTGACAACACTGAGGCC+AGG | + | chr6.1:4723992-4724011 | None:intergenic | 45.0% | |
| TCTGGAGGCTAAAAACCGAA+AGG | + | chr6.1:4725360-4725379 | None:intergenic | 45.0% | |
| TGACTGCGCAATACACATTC+AGG | + | chr6.1:4723241-4723260 | None:intergenic | 45.0% | |
| TGGAGAATGGCCAAAGTGAT+TGG | - | chr6.1:4728464-4728483 | MS.gene91476:CDS | 45.0% | |
| TGTATGATTGGCAGCGCTAA+TGG | + | chr6.1:4727683-4727702 | None:intergenic | 45.0% | |
| TTCTGCTATGCTTGTCTAGC+TGG | - | chr6.1:4725110-4725129 | MS.gene91476:intron | 45.0% | |
| TTCTTCTTACCCTGGAGAGT+TGG | - | chr6.1:4727591-4727610 | MS.gene91476:intron | 45.0% | |
| TTGGACTTAGGCATGATGTG+CGG | - | chr6.1:4724230-4724249 | MS.gene91476:intron | 45.0% | |
| TTTACATGAAGCCGGAGCAA+AGG | - | chr6.1:4724696-4724715 | MS.gene91476:intron | 45.0% | |
| TTTCCAAATAGCTCCTCCCT+AGG | + | chr6.1:4724580-4724599 | None:intergenic | 45.0% | |
| TTTCCTAGGGAGGAGCTATT+TGG | - | chr6.1:4724574-4724593 | MS.gene91476:intron | 45.0% | |
| ! | AAGAAAGCTCCCTGGTGTTT+TGG | - | chr6.1:4726477-4726496 | MS.gene91476:CDS | 45.0% |
| ! | ATGATGTGCGGAAAAAGCAC+AGG | - | chr6.1:4724242-4724261 | MS.gene91476:intron | 45.0% |
| ! | CCTTCTCATGGACTTTTGGA+TGG | - | chr6.1:4725587-4725606 | MS.gene91476:intron | 45.0% |
| ! | GAGCTTTTCATGACAGGCAA+TGG | - | chr6.1:4727154-4727173 | MS.gene91476:intron | 45.0% |
| ! | GCCAGTAGAATTTTCGCAGA+TGG | - | chr6.1:4726822-4726841 | MS.gene91476:intron | 45.0% |
| !!! | GTTTTTAGCCTCCAGATGTC+AGG | - | chr6.1:4725364-4725383 | MS.gene91476:CDS | 45.0% |
| !!! | TCAGCTTGTTTTGCGCTGTT+TGG | - | chr6.1:4727342-4727361 | MS.gene91476:intron | 45.0% |
| !!! | TCGCAGATGGCCAACTTTTT+TGG | - | chr6.1:4726835-4726854 | MS.gene91476:intron | 45.0% |
| AATGGTGGCAGTGACGTCAA+CGG | + | chr6.1:4727709-4727728 | None:intergenic | 50.0% | |
| AGCATGTCAGCTTGTGAGAC+AGG | - | chr6.1:4726387-4726406 | MS.gene91476:intron | 50.0% | |
| AGGTCATCCTGGTCAGTGAT+TGG | - | chr6.1:4724716-4724735 | MS.gene91476:intron | 50.0% | |
| CATCCAATGTTACAGGTCCC+AGG | + | chr6.1:4725710-4725729 | None:intergenic | 50.0% | |
| CTCAAAGGAAGAAAGCTCCC+TGG | - | chr6.1:4726469-4726488 | MS.gene91476:CDS | 50.0% | |
| GCGGCTATTTGACAACACTG+AGG | + | chr6.1:4723997-4724016 | None:intergenic | 50.0% | |
| GGTTTGTCCAATCACTGACC+AGG | + | chr6.1:4724726-4724745 | None:intergenic | 50.0% | |
| TCTTCTCGCATCTGGTGGAA+AGG | - | chr6.1:4727981-4728000 | MS.gene91476:intron | 50.0% | |
| TGACCTGGGACCTGTAACAT+TGG | - | chr6.1:4725704-4725723 | MS.gene91476:intron | 50.0% | |
| TGGTTAACGCAATCCCCACA+TGG | + | chr6.1:4724298-4724317 | None:intergenic | 50.0% | |
| TGTCTGCACCCTTTGGACTT+AGG | - | chr6.1:4724218-4724237 | MS.gene91476:intron | 50.0% | |
| ! | AAGTCCAAAGGGTGCAGACA+AGG | + | chr6.1:4724218-4724237 | None:intergenic | 50.0% |
| ! | AGTCCAAAGGGTGCAGACAA+GGG | + | chr6.1:4724217-4724236 | None:intergenic | 50.0% |
| ! | GGTGCTCTATTGGCTATGCA+AGG | - | chr6.1:4723166-4723185 | MS.gene91476:CDS | 50.0% |
| ! | TGCAGACAAGGGTGTGTGTT+AGG | + | chr6.1:4724206-4724225 | None:intergenic | 50.0% |
| ACACCCTTGTCTGCACCCTT+TGG | - | chr6.1:4724211-4724230 | MS.gene91476:intron | 55.0% | |
| AGGTTGGATGCCTGTTGACC+TGG | - | chr6.1:4725689-4725708 | MS.gene91476:intron | 55.0% | |
| GACCAGGATGACCTTTGCTC+CGG | + | chr6.1:4724710-4724729 | None:intergenic | 55.0% | |
| GGTTGGATGCCTGTTGACCT+GGG | - | chr6.1:4725690-4725709 | MS.gene91476:intron | 55.0% | |
| GTGGATCTTCTCGCATCTGG+TGG | - | chr6.1:4727976-4727995 | MS.gene91476:intron | 55.0% | |
| GTTACAGGTCCCAGGTCAAC+AGG | + | chr6.1:4725702-4725721 | None:intergenic | 55.0% | |
| !! | GTGGTGGATCTTCTCGCATC+TGG | - | chr6.1:4727973-4727992 | MS.gene91476:intron | 55.0% |
| AGCCGGAGCAAAGGTCATCC+TGG | - | chr6.1:4724705-4724724 | MS.gene91476:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 4723015 | 4728633 | 4723015 | ID=MS.gene91476 |
| chr6.1 | mRNA | 4723015 | 4728633 | 4723015 | ID=MS.gene91476.t1;Parent=MS.gene91476 |
| chr6.1 | exon | 4728461 | 4728633 | 4728461 | ID=MS.gene91476.t1.exon1;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4728461 | 4728633 | 4728461 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4728197 | 4728243 | 4728197 | ID=MS.gene91476.t1.exon2;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4728197 | 4728243 | 4728197 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4726867 | 4727134 | 4726867 | ID=MS.gene91476.t1.exon3;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4726867 | 4727134 | 4726867 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4726443 | 4726786 | 4726443 | ID=MS.gene91476.t1.exon4;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4726443 | 4726786 | 4726443 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4726040 | 4726325 | 4726040 | ID=MS.gene91476.t1.exon5;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4726040 | 4726325 | 4726040 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4725890 | 4725957 | 4725890 | ID=MS.gene91476.t1.exon6;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4725890 | 4725957 | 4725890 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4725138 | 4725389 | 4725138 | ID=MS.gene91476.t1.exon7;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4725138 | 4725389 | 4725138 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4724614 | 4724689 | 4724614 | ID=MS.gene91476.t1.exon8;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4724614 | 4724689 | 4724614 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4724402 | 4724478 | 4724402 | ID=MS.gene91476.t1.exon9;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4724402 | 4724478 | 4724402 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4724253 | 4724302 | 4724253 | ID=MS.gene91476.t1.exon10;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4724253 | 4724302 | 4724253 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4724018 | 4724102 | 4724018 | ID=MS.gene91476.t1.exon11;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4724018 | 4724102 | 4724018 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4723646 | 4723744 | 4723646 | ID=MS.gene91476.t1.exon12;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4723646 | 4723744 | 4723646 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| chr6.1 | exon | 4723015 | 4723266 | 4723015 | ID=MS.gene91476.t1.exon13;Parent=MS.gene91476.t1 |
| chr6.1 | CDS | 4723015 | 4723266 | 4723015 | ID=cds.MS.gene91476.t1;Parent=MS.gene91476.t1 |
| Gene Sequence |
| Protein sequence |
