AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91534

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91534.t1 MTR_1g082390 74.044 366 94 1 3 367 4 369 0.0 563
MS.gene91534.t1 MTR_7g113860 68.182 374 117 1 2 373 7 380 0.0 542
MS.gene91534.t1 MTR_7g113860 68.715 358 110 1 18 373 17 374 0.0 513
MS.gene91534.t1 MTR_7g113860 70.903 299 85 1 77 373 8 306 3.72e-159 449
MS.gene91534.t1 MTR_1g082410 62.025 395 43 10 1 373 1 310 1.25e-145 415
MS.gene91534.t1 MTR_8g089805 41.918 365 202 7 3 360 13 374 2.05e-98 298
MS.gene91534.t1 MTR_1g030340 41.361 382 205 9 3 372 12 386 3.35e-96 292
MS.gene91534.t1 MTR_7g087190 41.444 374 204 8 11 372 20 390 5.40e-94 286
MS.gene91534.t1 MTR_1g030220 42.651 347 188 7 32 372 42 383 7.98e-92 281
MS.gene91534.t1 MTR_1g030275 41.873 363 194 9 6 360 15 368 4.94e-91 278
MS.gene91534.t1 MTR_7g111780 43.402 341 172 7 31 368 37 359 8.41e-91 277
MS.gene91534.t1 MTR_7g033165 40.437 366 195 9 15 368 19 373 8.19e-90 275
MS.gene91534.t1 MTR_1g030230 41.081 370 205 8 6 368 8 371 3.41e-89 274
MS.gene91534.t1 MTR_1g030268 41.370 365 198 9 6 362 15 371 1.37e-86 267
MS.gene91534.t1 MTR_6g007090 40.282 355 192 7 16 362 25 367 8.33e-82 254
MS.gene91534.t1 MTR_7g116870 36.800 375 225 6 1 368 1 370 4.17e-77 243
MS.gene91534.t1 MTR_7g033155 38.462 364 195 7 28 368 36 393 7.51e-77 243
MS.gene91534.t1 MTR_8g038680 37.845 362 197 11 14 362 15 361 1.25e-75 238
MS.gene91534.t1 MTR_7g033150 38.244 353 200 7 28 368 33 379 3.91e-73 233
MS.gene91534.t1 MTR_8g089805 39.789 284 162 6 84 360 25 306 7.70e-72 227
MS.gene91534.t1 MTR_6g007095 38.375 357 198 8 21 368 32 375 2.05e-70 233
MS.gene91534.t1 MTR_6g007095 36.228 334 181 7 43 368 382 691 1.56e-56 196
MS.gene91534.t1 MTR_7g111780 42.857 273 135 7 99 368 6 260 2.16e-69 219
MS.gene91534.t1 MTR_8g028160 36.963 349 185 8 32 361 38 370 4.52e-68 219
MS.gene91534.t1 MTR_7g033165 40.484 289 153 7 15 291 19 300 1.00e-67 216
MS.gene91534.t1 MTR_1g030265 39.590 293 163 8 84 368 58 344 2.04e-65 211
MS.gene91534.t1 MTR_6g007100 36.512 367 204 10 12 368 9 356 2.55e-63 206
MS.gene91534.t1 MTR_8g012540 36.982 338 185 11 14 338 15 337 6.92e-63 205
MS.gene91534.t1 MTR_1g030268 38.776 294 167 8 6 291 15 303 3.75e-58 192
MS.gene91534.t1 MTR_2g015590 32.687 361 226 8 10 362 11 362 9.07e-51 174
MS.gene91534.t1 MTR_2g043980 32.713 376 207 10 6 367 10 353 1.01e-48 168
MS.gene91534.t1 MTR_3g463930 34.890 364 207 13 21 367 37 387 7.26e-46 162
MS.gene91534.t1 MTR_3g463960 33.795 361 208 12 21 367 37 380 3.40e-45 160
MS.gene91534.t1 MTR_3g463950 33.795 361 208 12 21 367 37 380 3.40e-45 160
MS.gene91534.t1 MTR_3g463970 33.795 361 208 12 21 367 37 380 3.40e-45 160
MS.gene91534.t1 MTR_3g463940 33.795 361 208 12 21 367 37 380 3.40e-45 160
MS.gene91534.t1 MTR_2g079090 30.159 378 212 11 9 367 7 351 7.06e-43 153
MS.gene91534.t1 MTR_0029s0050 30.159 378 212 11 9 367 7 351 1.75e-42 152
MS.gene91534.t1 MTR_0029s0100 30.159 378 212 11 9 367 7 351 4.04e-42 151
MS.gene91534.t1 MTR_2g079080 30.159 378 212 11 9 367 7 351 5.19e-42 150
MS.gene91534.t1 MTR_2g015580 32.044 362 210 12 16 360 33 375 2.65e-41 149
MS.gene91534.t1 MTR_2g015650 28.075 374 236 8 4 360 2 359 3.95e-41 149
MS.gene91534.t1 MTR_2g015630 31.609 348 198 11 35 362 36 363 2.22e-40 147
MS.gene91534.t1 MTR_2g015670 30.086 349 212 9 20 360 21 345 3.29e-40 146
MS.gene91534.t1 MTR_3g448360 32.637 383 218 16 4 367 2 363 1.84e-39 144
MS.gene91534.t1 MTR_3g069780 31.234 381 212 15 4 360 2 356 8.18e-39 142
MS.gene91534.t1 MTR_3g438030 31.234 381 212 15 4 360 2 356 1.43e-38 142
MS.gene91534.t1 MTR_4g104240 29.570 372 227 11 6 362 13 364 2.19e-38 141
MS.gene91534.t1 MTR_3g069520 30.851 376 222 16 4 362 2 356 2.23e-35 133
MS.gene91534.t1 MTR_5g009100 27.557 352 211 15 32 368 48 370 3.82e-32 124
MS.gene91534.t1 MTR_2g015590 30.796 289 193 5 10 291 11 299 8.30e-32 123
MS.gene91534.t1 MTR_5g074270 30.469 384 194 17 5 355 3 346 3.08e-31 122
MS.gene91534.t1 MTR_2g033930 26.902 368 225 13 10 361 9 348 4.91e-31 121
MS.gene91534.t1 MTR_4g122200 28.056 360 224 10 12 360 17 352 5.13e-31 121
MS.gene91534.t1 MTR_2g044100 29.586 338 208 11 32 360 45 361 1.70e-30 120
MS.gene91534.t1 MTR_8g079050 28.451 355 201 14 30 361 37 361 4.92e-30 119
MS.gene91534.t1 MTR_8g031430 27.273 374 230 13 3 361 4 350 2.69e-29 116
MS.gene91534.t1 MTR_5g084750 27.907 344 206 13 29 358 29 344 3.80e-29 115
MS.gene91534.t1 MTR_3g082830 27.697 343 208 12 29 358 37 352 4.06e-29 116
MS.gene91534.t1 MTR_3g098270 29.107 347 207 11 28 360 32 353 9.04e-29 115
MS.gene91534.t1 MTR_8g014910 27.793 367 233 13 1 358 4 347 3.05e-28 113
MS.gene91534.t1 MTR_3g114090 28.190 337 204 11 25 349 31 341 6.52e-28 112
MS.gene91534.t1 MTR_2g043990 31.690 284 151 8 6 277 72 324 7.65e-28 112
MS.gene91534.t1 MTR_1g025720 27.859 341 207 11 27 355 34 347 8.90e-28 112
MS.gene91534.t1 MTR_8g031390 27.844 334 200 12 33 361 52 349 1.19e-27 112
MS.gene91534.t1 MTR_1g025700 28.142 366 222 13 6 358 26 363 1.45e-27 112
MS.gene91534.t1 MTR_2g084585 28.152 341 209 13 29 358 29 344 2.30e-27 111
MS.gene91534.t1 MTR_5g084770 26.686 341 215 11 29 358 27 343 2.55e-27 110
MS.gene91534.t1 MTR_3g114120 28.571 343 212 11 25 358 42 360 3.93e-27 110
MS.gene91534.t1 MTR_1g025780 29.134 381 222 18 1 364 9 358 8.49e-27 109
MS.gene91534.t1 MTR_4g056160 28.736 348 201 13 29 358 26 344 2.64e-26 108
MS.gene91534.t1 MTR_2g015080 24.457 368 239 11 7 356 15 361 7.86e-26 107
MS.gene91534.t1 MTR_2g100620 27.299 348 212 12 25 358 26 346 1.52e-25 106
MS.gene91534.t1 MTR_8g031400 26.923 312 196 13 55 361 66 350 1.70e-25 106
MS.gene91534.t1 MTR_8g022790 28.409 352 186 12 32 361 39 346 2.03e-25 105
MS.gene91534.t1 MTR_3g052580 26.146 371 217 14 11 360 11 345 3.50e-25 105
MS.gene91534.t1 MTR_5g084790 24.731 372 236 10 2 358 4 346 3.66e-25 105
MS.gene91534.t1 MTR_3g052580 26.287 369 219 14 11 360 10 344 4.26e-25 105
MS.gene91534.t1 MTR_1g025910 29.118 340 202 13 35 362 41 353 9.00e-25 104
MS.gene91534.t1 MTR_8g031420 25.995 377 234 15 1 361 1 348 9.09e-25 103
MS.gene91534.t1 MTR_1g025680 25.770 357 228 12 25 370 29 359 1.07e-24 105
MS.gene91534.t1 MTR_7g116570 26.016 369 229 12 12 364 16 356 1.41e-24 103
MS.gene91534.t1 MTR_2g033920 24.740 384 230 12 1 361 6 353 1.75e-24 103
MS.gene91534.t1 MTR_4g087985 26.781 351 209 16 34 360 40 366 3.47e-24 102
MS.gene91534.t1 MTR_3g464730 25.978 358 228 10 13 358 11 343 5.97e-24 101
MS.gene91534.t1 MTR_8g022810 27.945 365 226 15 11 361 20 361 1.52e-23 100
MS.gene91534.t1 MTR_5g022630 25.278 360 231 11 3 347 12 348 1.76e-23 100
MS.gene91534.t1 MTR_0565s0010 24.860 358 231 11 11 356 13 344 4.22e-23 99.4
MS.gene91534.t1 MTR_7g116520 27.697 343 206 11 32 360 36 350 5.15e-23 99.4
MS.gene91534.t1 MTR_3g052490 27.297 381 225 14 1 360 1 350 5.57e-23 99.0
MS.gene91534.t1 MTR_8g074570 26.913 379 229 15 3 360 5 356 6.97e-23 99.0
MS.gene91534.t1 MTR_0009s0250 28.165 316 188 12 1 300 1 293 1.98e-22 97.4
MS.gene91534.t1 MTR_5g078210 26.409 337 210 11 34 359 29 338 2.58e-22 97.1
MS.gene91534.t1 MTR_8g087890 24.603 378 242 11 9 372 10 358 2.58e-22 97.1
MS.gene91534.t1 MTR_3g435540 26.879 346 201 14 32 358 25 337 3.24e-22 97.1
MS.gene91534.t1 MTR_8g031390 27.397 292 175 11 33 319 52 311 5.23e-22 95.5
MS.gene91534.t1 MTR_4g056280 25.948 343 214 11 29 358 29 344 1.46e-21 95.1
MS.gene91534.t1 MTR_5g083040 28.228 333 202 13 29 347 31 340 1.60e-21 95.1
MS.gene91534.t1 MTR_5g093090 25.469 373 228 12 6 361 8 347 2.10e-21 94.7
MS.gene91534.t1 MTR_3g052480 25.995 377 228 13 6 360 5 352 3.00e-21 94.4
MS.gene91534.t1 MTR_8g075230 26.415 371 227 13 9 358 5 350 3.50e-21 94.0
MS.gene91534.t1 MTR_8g087870 25.806 341 200 11 29 355 28 329 3.92e-21 93.6
MS.gene91534.t1 MTR_1g025760 26.613 372 234 14 5 364 55 399 2.02e-20 92.4
MS.gene91534.t1 MTR_8g075220 26.400 375 229 14 5 358 11 359 4.99e-20 90.9
MS.gene91534.t1 MTR_8g075200 25.937 347 213 12 27 358 38 355 7.78e-20 90.5
MS.gene91534.t1 MTR_3g024510 23.631 347 224 10 23 356 31 349 1.93e-19 89.0
MS.gene91534.t1 MTR_6g021530 25.731 342 211 11 34 360 33 346 2.16e-19 89.0
MS.gene91534.t1 MTR_4g108690 25.000 348 205 13 32 358 29 341 2.80e-19 88.6
MS.gene91534.t1 MTR_4g019880 25.543 368 225 14 12 360 13 350 3.13e-19 88.6
MS.gene91534.t1 MTR_1g079530 26.667 345 203 14 32 361 31 340 5.95e-19 87.4
MS.gene91534.t1 MTR_3g005660 25.588 340 214 12 29 354 35 349 1.01e-18 87.0
MS.gene91534.t1 MTR_7g116510 26.087 368 225 14 11 361 6 343 1.38e-18 86.7
MS.gene91534.t1 MTR_7g008060 24.118 340 211 10 32 361 35 337 1.89e-18 85.9
MS.gene91534.t1 MTR_3g005650 24.340 341 223 9 29 361 29 342 3.31e-18 85.5
MS.gene91534.t1 MTR_4g035353 23.370 368 247 11 3 360 5 347 3.66e-18 85.1
MS.gene91534.t1 MTR_7g116500 24.490 343 217 11 32 360 35 349 6.36e-18 84.7
MS.gene91534.t1 MTR_1g024890 25.333 375 240 13 1 361 1 349 1.65e-17 83.6
MS.gene91534.t1 MTR_5g022640 23.873 377 236 12 3 358 12 358 2.68e-17 82.8
MS.gene91534.t1 MTR_1g069175 25.620 363 222 14 16 360 19 351 7.98e-17 81.3
MS.gene91534.t1 MTR_5g078210 27.881 269 170 10 34 291 29 284 4.34e-16 79.0
MS.gene91534.t1 MTR_5g074210 29.299 157 92 4 200 355 64 202 1.12e-15 75.9
MS.gene91534.t1 MTR_2g017925 26.608 342 194 14 29 354 32 332 1.84e-15 77.4
MS.gene91534.t1 MTR_8g022810 29.730 222 136 9 11 221 20 232 1.84e-15 77.0
MS.gene91534.t1 MTR_2g033920 24.204 314 191 10 1 291 6 295 3.69e-15 75.9
MS.gene91534.t1 MTR_2g461580 23.647 351 208 10 29 362 30 337 5.74e-15 75.9
MS.gene91534.t1 MTR_2g017875 24.633 341 206 12 29 354 33 337 6.69e-15 75.5
MS.gene91534.t1 MTR_2g017965 24.490 343 207 12 29 355 32 338 2.86e-14 73.9
MS.gene91534.t1 MTR_2g058390 46.875 64 31 2 158 219 7 69 8.31e-14 66.2
MS.gene91534.t1 MTR_8g012520 28.261 138 65 2 162 299 8 111 1.61e-13 67.8
MS.gene91534.t1 MTR_1108s0010 31.210 157 91 3 202 358 64 203 2.41e-13 68.9
MS.gene91534.t1 MTR_1g030262 45.333 75 40 1 6 80 12 85 4.08e-13 65.1
MS.gene91534.t1 MTR_5g087690 23.952 334 212 11 32 354 52 354 5.37e-13 70.1
MS.gene91534.t1 MTR_1g092750 24.768 323 198 12 32 344 42 329 6.82e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91534.t1 AT1G54790 60.590 373 145 1 3 373 4 376 4.99e-172 484
MS.gene91534.t1 AT1G54790 56.642 399 145 2 3 373 4 402 8.90e-166 469
MS.gene91534.t1 AT1G54790 59.673 367 144 2 11 373 11 377 2.12e-163 462
MS.gene91534.t1 AT3G05180 55.271 351 153 3 19 365 23 373 2.48e-136 394
MS.gene91534.t1 AT3G26430 43.526 363 195 7 15 370 16 375 2.30e-93 284
MS.gene91534.t1 AT1G09390 43.413 334 171 7 29 359 36 354 1.02e-90 277
MS.gene91534.t1 AT1G56670 40.000 360 200 6 5 362 15 360 6.79e-90 275
MS.gene91534.t1 AT3G62280 41.369 336 179 6 29 362 35 354 3.99e-87 268
MS.gene91534.t1 AT1G67830 40.294 340 193 7 28 360 28 364 9.35e-86 265
MS.gene91534.t1 AT5G14450 39.237 367 207 8 11 368 22 381 5.15e-85 263
MS.gene91534.t1 AT3G27950 39.737 380 205 9 3 372 4 369 1.19e-76 241
MS.gene91534.t1 AT4G01130 39.474 342 194 5 28 361 32 368 1.33e-75 239
MS.gene91534.t1 AT1G56670 39.100 289 168 4 5 291 15 297 6.38e-65 208
MS.gene91534.t1 AT3G62280 40.149 269 151 4 29 295 35 295 1.16e-61 200
MS.gene91534.t1 AT4G01130 37.063 286 168 4 84 361 1 282 6.03e-57 188
MS.gene91534.t1 AT4G01130 37.132 272 158 5 28 291 32 298 1.18e-47 165
MS.gene91534.t1 AT1G28610 33.046 348 201 11 30 362 31 361 4.46e-45 159
MS.gene91534.t1 AT2G27360 31.152 382 221 13 2 362 5 365 4.63e-45 159
MS.gene91534.t1 AT1G28600 31.429 385 218 16 1 364 4 363 7.57e-45 159
MS.gene91534.t1 AT1G31550 31.070 383 223 14 1 362 4 366 1.46e-42 153
MS.gene91534.t1 AT1G28580 31.564 358 200 13 27 362 34 368 2.11e-42 152
MS.gene91534.t1 AT1G31550 30.366 382 224 14 1 362 4 363 4.50e-40 146
MS.gene91534.t1 AT1G28650 29.333 375 230 12 6 362 11 368 8.60e-40 145
MS.gene91534.t1 AT1G28570 30.952 378 220 16 6 362 8 365 1.14e-39 145
MS.gene91534.t1 AT1G28590 30.000 380 220 14 8 362 9 367 1.25e-39 145
MS.gene91534.t1 AT5G45910 28.378 370 243 8 5 362 7 366 1.65e-39 144
MS.gene91534.t1 AT3G48460 29.310 348 207 10 32 362 40 365 3.75e-37 138
MS.gene91534.t1 AT1G28640 28.647 377 234 11 4 362 7 366 7.19e-37 137
MS.gene91534.t1 AT1G28670 28.571 378 234 12 4 362 7 367 1.83e-33 128
MS.gene91534.t1 AT4G10950 25.895 363 217 14 29 372 70 399 6.78e-33 127
MS.gene91534.t1 AT4G10950 25.895 363 213 15 29 372 70 395 3.14e-31 122
MS.gene91534.t1 AT1G28660 29.024 379 230 12 4 362 7 366 3.81e-31 122
MS.gene91534.t1 AT1G28660 28.571 378 232 12 4 362 7 365 1.38e-30 120
MS.gene91534.t1 AT5G22810 30.994 342 203 12 29 359 33 352 2.43e-30 119
MS.gene91534.t1 AT2G23540 28.238 386 214 15 9 361 17 372 5.46e-30 119
MS.gene91534.t1 AT3G16370 28.571 343 206 10 29 358 29 345 2.99e-29 116
MS.gene91534.t1 AT3G53100 27.838 370 228 12 1 358 1 343 3.68e-29 116
MS.gene91534.t1 AT3G50400 28.895 353 203 14 30 361 34 359 2.34e-28 114
MS.gene91534.t1 AT1G28580 30.108 279 162 10 98 362 28 287 7.56e-28 111
MS.gene91534.t1 AT4G26790 27.035 344 213 10 27 358 26 343 1.13e-27 112
MS.gene91534.t1 AT4G26790 27.035 344 213 10 27 358 26 343 1.13e-27 112
MS.gene91534.t1 AT5G03810 27.326 344 209 12 29 358 29 345 1.41e-27 111
MS.gene91534.t1 AT2G42990 27.893 337 211 10 29 356 27 340 4.30e-27 110
MS.gene91534.t1 AT1G53920 26.649 379 234 11 5 367 21 371 6.14e-27 110
MS.gene91534.t1 AT1G20120 27.536 345 210 9 27 358 75 392 1.30e-26 110
MS.gene91534.t1 AT5G03820 26.087 345 213 11 29 358 32 349 1.84e-26 108
MS.gene91534.t1 AT1G28570 32.889 225 133 9 145 362 80 293 2.39e-26 107
MS.gene91534.t1 AT5G03820 26.087 345 213 11 29 358 60 377 2.69e-26 108
MS.gene91534.t1 AT5G15720 27.729 339 207 12 29 354 29 342 7.50e-26 107
MS.gene91534.t1 AT1G29670 25.131 382 245 12 3 372 6 358 9.02e-26 107
MS.gene91534.t1 AT1G29670 25.683 366 231 12 3 356 74 410 3.33e-25 106
MS.gene91534.t1 AT2G04570 25.344 363 235 11 11 362 9 346 3.94e-25 105
MS.gene91534.t1 AT1G28570 33.990 203 117 8 166 362 11 202 4.33e-25 102
MS.gene91534.t1 AT2G40250 25.816 337 214 9 32 355 38 351 6.56e-25 104
MS.gene91534.t1 AT5G63170 27.654 358 209 13 1 347 1 319 1.52e-24 103
MS.gene91534.t1 AT5G08460 26.158 367 233 10 9 361 28 370 4.44e-24 102
MS.gene91534.t1 AT1G75900 27.874 348 211 13 29 364 42 361 1.12e-23 101
MS.gene91534.t1 AT1G20132 26.554 354 209 13 29 364 60 380 1.24e-23 101
MS.gene91534.t1 AT1G71691 25.287 348 226 9 22 361 47 368 1.66e-23 100
MS.gene91534.t1 AT1G29660 27.485 342 205 13 29 356 31 343 2.04e-23 100
MS.gene91534.t1 AT5G41890 26.816 358 208 13 30 361 31 360 3.02e-23 100
MS.gene91534.t1 AT5G42170 26.361 349 219 13 25 363 45 365 6.04e-23 99.0
MS.gene91534.t1 AT3G14820 25.538 372 242 12 5 365 4 351 8.21e-23 98.6
MS.gene91534.t1 AT1G71120 26.211 351 208 12 27 361 28 343 1.07e-22 98.2
MS.gene91534.t1 AT1G73610 27.381 336 199 9 32 358 37 336 2.27e-22 97.1
MS.gene91534.t1 AT5G45960 24.695 328 213 11 34 349 51 356 2.63e-22 97.4
MS.gene91534.t1 AT1G20130 26.781 351 219 12 29 364 203 530 5.95e-22 97.8
MS.gene91534.t1 AT1G20130 26.781 351 219 12 29 364 183 510 7.49e-22 97.4
MS.gene91534.t1 AT1G75890 27.859 341 207 14 29 356 46 360 7.63e-22 95.9
MS.gene91534.t1 AT1G75890 27.859 341 207 14 29 356 75 389 9.40e-22 96.3
MS.gene91534.t1 AT4G18970 24.348 345 213 11 29 356 27 340 1.76e-21 94.7
MS.gene91534.t1 AT4G18970 24.638 345 212 11 29 356 27 340 2.56e-21 95.1
MS.gene91534.t1 AT5G45950 25.826 333 211 10 34 358 44 348 3.48e-21 94.0
MS.gene91534.t1 AT1G59406 25.676 370 231 13 11 369 11 347 3.78e-21 93.6
MS.gene91534.t1 AT1G59030 25.676 370 231 13 11 369 11 347 3.78e-21 93.6
MS.gene91534.t1 AT1G58725 25.676 370 231 13 11 369 11 347 3.78e-21 93.6
MS.gene91534.t1 AT2G31540 25.513 341 204 12 28 349 33 342 3.82e-21 94.0
MS.gene91534.t1 AT1G20135 26.420 352 215 9 11 353 10 326 5.59e-21 92.8
MS.gene91534.t1 AT1G75890 27.350 351 209 15 29 356 46 373 8.45e-21 93.2
MS.gene91534.t1 AT3G14225 25.956 366 219 13 16 360 23 357 1.17e-20 92.8
MS.gene91534.t1 AT5G45670 25.770 357 220 12 6 350 12 335 1.27e-20 92.4
MS.gene91534.t1 AT3G14225 25.676 370 219 14 16 360 23 361 1.64e-20 92.4
MS.gene91534.t1 AT4G28780 25.575 348 217 12 32 364 33 353 1.68e-20 92.0
MS.gene91534.t1 AT1G53940 29.769 346 199 15 32 360 41 359 2.78e-20 91.7
MS.gene91534.t1 AT1G06990 25.532 329 208 10 28 344 35 338 3.38e-20 91.3
MS.gene91534.t1 AT2G30220 25.068 367 221 13 21 369 24 354 3.68e-20 90.9
MS.gene91534.t1 AT3G04290 24.928 349 220 11 32 366 31 351 6.04e-20 90.5
MS.gene91534.t1 AT1G75920 26.301 365 220 13 6 358 8 335 6.97e-20 90.1
MS.gene91534.t1 AT1G23500 27.515 338 201 10 32 360 37 339 7.92e-20 89.7
MS.gene91534.t1 AT5G40990 25.532 376 245 12 1 360 1 357 8.28e-20 90.1
MS.gene91534.t1 AT1G74460 25.872 344 207 12 32 358 25 337 4.59e-19 87.8
MS.gene91534.t1 AT2G30310 23.416 363 214 12 28 367 32 353 5.72e-19 87.8
MS.gene91534.t1 AT2G19060 27.035 344 203 13 29 360 29 336 6.04e-19 87.4
MS.gene91534.t1 AT1G58520 25.627 359 220 14 20 369 20 340 1.07e-18 86.7
MS.gene91534.t1 AT1G58525 25.627 359 220 14 20 369 20 340 1.07e-18 86.7
MS.gene91534.t1 AT1G75920 26.053 380 217 14 6 358 3 345 2.56e-18 85.5
MS.gene91534.t1 AT1G54020 24.779 339 199 11 32 357 35 330 3.94e-18 85.5
MS.gene91534.t1 AT5G15720 27.536 276 175 10 29 291 29 292 4.30e-18 84.3
MS.gene91534.t1 AT1G58430 23.204 362 216 14 28 367 33 354 4.92e-18 84.7
MS.gene91534.t1 AT2G03980 28.195 266 166 8 27 283 40 289 5.47e-18 84.7
MS.gene91534.t1 AT2G03980 28.195 266 166 8 27 283 40 289 5.47e-18 84.7
MS.gene91534.t1 AT2G03980 28.195 266 166 8 27 283 40 289 5.47e-18 84.7
MS.gene91534.t1 AT2G03980 28.195 266 166 8 27 283 40 289 5.47e-18 84.7
MS.gene91534.t1 AT5G55050 28.689 366 186 16 27 359 36 359 6.91e-18 84.7
MS.gene91534.t1 AT5G33370 25.330 379 224 15 6 361 5 347 8.00e-18 84.3
MS.gene91534.t1 AT2G24560 23.546 361 216 14 28 367 32 353 1.10e-17 84.0
MS.gene91534.t1 AT1G75920 26.168 321 190 12 51 358 21 307 1.24e-17 83.2
MS.gene91534.t1 AT1G71691 25.899 278 185 7 22 291 47 311 1.90e-17 82.4
MS.gene91534.t1 AT1G75910 25.212 353 211 13 22 358 20 335 2.00e-17 82.8
MS.gene91534.t1 AT1G33811 23.224 366 241 13 6 355 9 350 3.67e-17 82.4
MS.gene91534.t1 AT1G75880 25.648 386 236 15 3 364 13 371 5.65e-17 82.0
MS.gene91534.t1 AT2G19050 26.437 348 198 12 29 360 30 335 6.32e-17 81.6
MS.gene91534.t1 AT5G15720 26.241 282 173 10 84 354 54 311 1.30e-16 80.5
MS.gene91534.t1 AT1G71250 23.547 344 225 10 29 360 40 357 1.39e-16 80.9
MS.gene91534.t1 AT1G75880 25.907 386 236 16 3 364 13 372 2.57e-16 80.1
MS.gene91534.t1 AT5G03980 25.177 282 171 11 96 359 57 316 2.72e-16 79.3
MS.gene91534.t1 AT3G14220 25.485 361 218 13 13 361 17 338 2.74e-16 79.7
MS.gene91534.t1 AT5G03610 25.294 340 200 13 32 355 45 346 6.07e-16 78.6
MS.gene91534.t1 AT1G75930 28.094 299 183 10 18 300 17 299 2.29e-15 77.0
MS.gene91534.t1 AT1G54030 25.298 336 192 13 30 353 52 340 4.62e-15 76.6
MS.gene91534.t1 AT1G28600 29.767 215 121 11 1 199 4 204 2.06e-14 72.4
MS.gene91534.t1 AT1G53990 25.656 343 210 14 32 360 37 348 2.54e-14 73.9
MS.gene91534.t1 AT1G71691 23.592 284 185 8 84 361 10 267 3.79e-14 72.4
MS.gene91534.t1 AT3G43550 25.497 302 192 12 7 291 1 286 1.34e-13 70.9
MS.gene91534.t1 AT1G54010 25.688 327 196 13 32 347 38 328 1.51e-13 71.6
MS.gene91534.t1 AT4G16233 33.607 122 69 2 240 361 6 115 2.39e-13 67.0
MS.gene91534.t1 AT1G53940 30.739 257 152 11 32 271 41 288 3.09e-13 70.1
MS.gene91534.t1 AT2G19050 26.692 266 154 9 29 278 30 270 4.34e-13 69.3
MS.gene91534.t1 AT4G30140 25.287 348 200 14 29 360 32 335 6.09e-13 69.7
MS.gene91534.t1 AT5G37690 23.784 370 236 15 1 357 2 338 7.59e-13 69.3
MS.gene91534.t1 AT1G28610 29.121 182 109 6 30 199 31 204 8.46e-13 68.2
MS.gene91534.t1 AT2G31550 23.707 232 146 8 134 357 1 209 9.04e-13 67.4
MS.gene91534.t1 AT3G14210 26.269 335 200 14 32 354 38 337 1.58e-12 68.6
MS.gene91534.t1 AT1G54000 24.398 332 208 12 32 354 38 335 1.86e-12 68.6
MS.gene91534.t1 AT2G24560 23.684 304 191 11 28 310 32 315 4.46e-12 66.6
MS.gene91534.t1 AT5G37690 23.019 265 171 8 99 357 93 330 7.20e-11 63.5

Find 83 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATTCTTAAATGCCTATT+TGG 0.166109 1.2:-60545296 MS.gene91534:CDS
TTGCATCCATGATGGAAATT+TGG 0.222329 1.2:+60545259 None:intergenic
GGAGAAACAAAGGTCTTAAA+TGG 0.231574 1.2:-60544281 MS.gene91534:CDS
TCCGTTCAGCTTTGGGGTTC+AGG 0.255282 1.2:-60545185 MS.gene91534:CDS
CTCAATTCCAACAATTCTAT+TGG 0.263960 1.2:-60544880 MS.gene91534:CDS
GGATCAGTCCGTTCAGCTTT+GGG 0.265740 1.2:-60545192 MS.gene91534:CDS
CCTAGTTCATCAAGCTTTGA+TGG 0.273723 1.2:+60544618 None:intergenic
GGAATTTGAAACTGGAATAA+AGG 0.284630 1.2:-60544859 MS.gene91534:intron
ATTATGGCTTGTTGTGGATA+TGG 0.307425 1.2:-60544341 MS.gene91534:CDS
CCCCTTCTCGAAATAATCTT+TGG 0.307718 1.2:+60544977 None:intergenic
CGGATCAGTCCGTTCAGCTT+TGG 0.315057 1.2:-60545193 MS.gene91534:CDS
TTGATGGATCAGTGCCAAAT+TGG 0.316193 1.2:+60544634 None:intergenic
TATCCACAACAAGCCATAAT+TGG 0.319047 1.2:+60544344 None:intergenic
AATGCCTATTTGGATTCATT+TGG 0.331617 1.2:-60545286 MS.gene91534:CDS
ATTCTATTGGAATTTGAAAC+TGG 0.334096 1.2:-60544867 MS.gene91534:CDS
CGGGTTCTCAAATTACTTGC+AGG 0.342371 1.2:-60545136 MS.gene91534:intron
GGTGGACGTGTTGCAGCCTT+TGG 0.346278 1.2:-60546167 MS.gene91534:CDS
TCAAATTCCAATAGAATTGT+TGG 0.363868 1.2:+60544873 None:intergenic
CAAGCCAAATGAATCCAAAT+AGG 0.382138 1.2:+60545282 None:intergenic
GGATGCAACTTTGCAGCATC+AGG 0.384483 1.2:-60545244 MS.gene91534:CDS
CAATAGAATTGTTGGAATTG+AGG 0.399195 1.2:+60544881 None:intergenic
TTGGAATTGAGGCAATTATC+TGG 0.405354 1.2:+60544892 None:intergenic
AATCACTTCAAAACTCCGTC+TGG 0.419405 1.2:-60546116 MS.gene91534:CDS
TATCCAACAGCTTTCAACTT+TGG 0.422730 1.2:-60546209 MS.gene91534:CDS
TAACATTTACATCTGGATAC+TGG 0.424521 1.2:+60544520 None:intergenic
TTCTCGAAATAATCTTTGGC+CGG 0.428325 1.2:+60544981 None:intergenic
CCATCAAAGCTTGATGAACT+AGG 0.448934 1.2:-60544618 MS.gene91534:CDS
TGATGGATCAGTGCCAAATT+GGG 0.450747 1.2:+60544635 None:intergenic
AGGGTTTGAACAGCCAATTA+TGG 0.454257 1.2:-60544357 MS.gene91534:CDS
AATTTCTGCTATTCAAAGCT+CGG 0.462880 1.2:-60545156 MS.gene91534:CDS
TGATGCAACATATCGATTTG+TGG 0.468762 1.2:+60544184 None:intergenic
TCCAAATAGGCATTTAAGAA+TGG 0.469994 1.2:+60545295 None:intergenic
CTGATCCGCGCTGCAGTTGG+TGG 0.476555 1.2:+60545208 None:intergenic
GGCTTGCCAAATTTCCATCA+TGG 0.482832 1.2:-60545265 MS.gene91534:CDS
TCACCAAAGTTGAAAGCTGT+TGG 0.485787 1.2:+60546206 None:intergenic
ACATATGTAACATTTACATC+TGG 0.494010 1.2:+60544513 None:intergenic
GACTGTATGACAGCGGGGCT+AGG 0.495231 1.2:-60544710 MS.gene91534:CDS
TATGATAGTCGCGTTTCTTG+TGG 0.500613 1.2:-60544302 MS.gene91534:CDS
TGTGAGTCCACTCGGATGCT+TGG 0.504919 1.2:-60544670 MS.gene91534:CDS
GGGACGGTAGTTACAGCAAA+AGG 0.509148 1.2:-60544260 MS.gene91534:CDS
GAGAAACAAAGGTCTTAAAT+GGG 0.510564 1.2:-60544280 MS.gene91534:CDS
GCCAAAGATTATTTCGAGAA+GGG 0.510569 1.2:-60544978 MS.gene91534:CDS
AGTGATTCTGTCCGTAAGGT+GGG 0.513878 1.2:+60546132 None:intergenic
AAGTGATTCTGTCCGTAAGG+TGG 0.517379 1.2:+60546131 None:intergenic
ATAGTAGTGTGTATGTAAGC+TGG 0.522866 1.2:-60544229 MS.gene91534:CDS
ATTTCTGCTATTCAAAGCTC+GGG 0.524143 1.2:-60545155 MS.gene91534:CDS
TGATTCTGTCCGTAAGGTGG+GGG 0.527664 1.2:+60546134 None:intergenic
GGTGATTCAACCTCGGACAC+AGG 0.528880 1.2:-60546188 MS.gene91534:CDS
GGACTGATCCGCGCTGCAGT+TGG 0.529298 1.2:+60545205 None:intergenic
CAACTTTGGTGATTCAACCT+CGG 0.535190 1.2:-60546195 MS.gene91534:CDS
GACAGAGACTGTATGACAGC+GGG 0.538125 1.2:-60544716 MS.gene91534:intron
TTGAAGTGATTCTGTCCGTA+AGG 0.541346 1.2:+60546128 None:intergenic
TCTCGAAATAATCTTTGGCC+GGG 0.541874 1.2:+60544982 None:intergenic
GTTGCATCACAAATTCTCAC+TGG 0.551931 1.2:-60544170 MS.gene91534:CDS
CCAAAGATTATTTCGAGAAG+GGG 0.556487 1.2:-60544977 MS.gene91534:CDS
GATTTCTGTAGTAAATTGCA+TGG 0.558887 1.2:-60544543 MS.gene91534:CDS
TAGTAGTGTGTATGTAAGCT+GGG 0.559819 1.2:-60544228 MS.gene91534:CDS
GGCCAAAGATTATTTCGAGA+AGG 0.560573 1.2:-60544979 MS.gene91534:CDS
CTGCAAAGTTGCATCCATGA+TGG 0.569223 1.2:+60545251 None:intergenic
ATCACTTCAAAACTCCGTCT+GGG 0.569649 1.2:-60546115 MS.gene91534:CDS
AAGTCAACAGAATTTGCTAC+AGG 0.576138 1.2:+60546236 None:intergenic
ATACATAATGTGAGTCCACT+CGG 0.587852 1.2:-60544678 MS.gene91534:CDS
CAGCCAATTATGGCTTGTTG+TGG 0.590126 1.2:-60544347 MS.gene91534:CDS
AACAAAGGTCTTAAATGGGA+CGG 0.594075 1.2:-60544276 MS.gene91534:CDS
CGTTTCTTGTGGAGAAACAA+AGG 0.600897 1.2:-60544291 MS.gene91534:CDS
ACCTGAACCCCAAAGCTGAA+CGG 0.605895 1.2:+60545184 None:intergenic
AACACGTCCACCTGTGTCCG+AGG 0.613374 1.2:+60546178 None:intergenic
GTGATTCTGTCCGTAAGGTG+GGG 0.616426 1.2:+60546133 None:intergenic
AGTGTGTATGTAAGCTGGGA+TGG 0.622186 1.2:-60544224 MS.gene91534:CDS
GATCAGTCCGTTCAGCTTTG+GGG 0.635766 1.2:-60545191 MS.gene91534:CDS
GATTCAACCTCGGACACAGG+TGG 0.645296 1.2:-60546185 MS.gene91534:CDS
GATTCTGTCCGTAAGGTGGG+GGG 0.652057 1.2:+60546135 None:intergenic
ATGGCTTGTTGTGGATATGG+AGG 0.663046 1.2:-60544338 MS.gene91534:CDS
CCATCACAAAATCTCCCAGA+CGG 0.670582 1.2:+60546101 None:intergenic
CAGCTAAGTTGTGTTCACGA+AGG 0.677389 1.2:+60544592 None:intergenic
AAATGAGCCAAGCATCCGAG+TGG 0.678410 1.2:+60544663 None:intergenic
GTTGTGAGTAATTTGCAATG+AGG 0.678761 1.2:+60544466 None:intergenic
ATTGCAAATTACTCACAACA+TGG 0.693312 1.2:-60544462 MS.gene91534:intron
ACGCGACTATCATAGTTCAA+CGG 0.697951 1.2:+60544311 None:intergenic
TTCTTCCACCAACTGCAGCG+CGG 0.720187 1.2:-60545213 MS.gene91534:CDS
ACAGAGACTGTATGACAGCG+GGG 0.736551 1.2:-60544715 MS.gene91534:intron
CGACTATCATAGTTCAACGG+CGG 0.756925 1.2:+60544314 None:intergenic
TGACAGAGACTGTATGACAG+CGG 0.785095 1.2:-60544717 MS.gene91534:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATAACTGGTATT+TGG - chr1.2:60545012-60545031 MS.gene91534:intron 15.0%
!! AACTACGAAAATTTCATAAA+AGG + chr1.2:60544378-60544397 None:intergenic 20.0%
!! CTAACAAATTAGTAATGAAT+TGG - chr1.2:60545594-60545613 MS.gene91534:intron 20.0%
!!! AGATTTTAAGAACAGAATTT+CGG + chr1.2:60544813-60544832 None:intergenic 20.0%
!!! CAATTCATTACTAATTTGTT+AGG + chr1.2:60545596-60545615 None:intergenic 20.0%
!!! TATACATTTTTGAAATAGGT+CGG - chr1.2:60545464-60545483 MS.gene91534:intron 20.0%
!!! TATTTTCTCATCAACTTTAA+AGG - chr1.2:60544574-60544593 MS.gene91534:CDS 20.0%
! ACATATGTAACATTTACATC+TGG + chr1.2:60545907-60545926 None:intergenic 25.0%
! GAAACATCTTATGTTACATA+CGG - chr1.2:60544673-60544692 MS.gene91534:CDS 25.0%
! GAAATTCTGTTCTTAAAATC+TGG - chr1.2:60544812-60544831 MS.gene91534:intron 25.0%
! GAATTAGAGAAAAACAAAGT+TGG + chr1.2:60545355-60545374 None:intergenic 25.0%
! TCAAATTCCAATAGAATTGT+TGG + chr1.2:60545547-60545566 None:intergenic 25.0%
!! ATTCTATTGGAATTTGAAAC+TGG - chr1.2:60545550-60545569 MS.gene91534:intron 25.0%
!! CTTGAGTTCAAGAATATTTT+AGG + chr1.2:60545632-60545651 None:intergenic 25.0%
!! TTTTCTCTAATTCATTCATG+TGG - chr1.2:60545362-60545381 MS.gene91534:intron 25.0%
!!! GGGTTATACATTTTTGAAAT+AGG - chr1.2:60545460-60545479 MS.gene91534:intron 25.0%
AAAAATTTACGAGTATGACC+CGG - chr1.2:60545417-60545436 MS.gene91534:intron 30.0%
AAGGTTACACTGTCATATAA+TGG - chr1.2:60545043-60545062 MS.gene91534:intron 30.0%
AATGATCACAATCATGTTTC+AGG - chr1.2:60545391-60545410 MS.gene91534:intron 30.0%
AATGCCTATTTGGATTCATT+TGG - chr1.2:60545131-60545150 MS.gene91534:intron 30.0%
AATTTCTGCTATTCAAAGCT+CGG - chr1.2:60545261-60545280 MS.gene91534:CDS 30.0%
ACATAAGATGTTTCGTTTGT+TGG + chr1.2:60544667-60544686 None:intergenic 30.0%
ATCTATGTATTCACGTAATC+CGG + chr1.2:60544872-60544891 None:intergenic 30.0%
ATTGCAAATTACTCACAACA+TGG - chr1.2:60545955-60545974 MS.gene91534:intron 30.0%
CAATAGAATTGTTGGAATTG+AGG + chr1.2:60545539-60545558 None:intergenic 30.0%
CTCAATTCCAACAATTCTAT+TGG - chr1.2:60545537-60545556 MS.gene91534:intron 30.0%
CTGGTATTTGGAAATAAGAA+AGG - chr1.2:60545024-60545043 MS.gene91534:intron 30.0%
GAGAAACAAAGGTCTTAAAT+GGG - chr1.2:60546137-60546156 MS.gene91534:CDS 30.0%
GATTTCTGTAGTAAATTGCA+TGG - chr1.2:60545874-60545893 MS.gene91534:intron 30.0%
TAACATTTACATCTGGATAC+TGG + chr1.2:60545900-60545919 None:intergenic 30.0%
TATTCTATCCAATGCAATTC+TGG - chr1.2:60545069-60545088 MS.gene91534:intron 30.0%
TCAAAAAACCAGAATTGCAT+TGG + chr1.2:60545080-60545099 None:intergenic 30.0%
TCCAAATAGGCATTTAAGAA+TGG + chr1.2:60545125-60545144 None:intergenic 30.0%
TGTATGGTTATTTGTTTGCA+GGG - chr1.2:60546041-60546060 MS.gene91534:intron 30.0%
TTCTGTTCTTAAAATCTGGA+CGG - chr1.2:60544816-60544835 MS.gene91534:intron 30.0%
TTGTATGGTTATTTGTTTGC+AGG - chr1.2:60546040-60546059 MS.gene91534:intron 30.0%
! CTCATCAACTTTAAAGGTAA+AGG - chr1.2:60544580-60544599 MS.gene91534:CDS 30.0%
! GGAATTTGAAACTGGAATAA+AGG - chr1.2:60545558-60545577 MS.gene91534:intron 30.0%
! TTTGAAACTGGAATAAAGGT+TGG - chr1.2:60545562-60545581 MS.gene91534:intron 30.0%
!! GCTCATTTTATTTCCCAATT+TGG - chr1.2:60545769-60545788 MS.gene91534:intron 30.0%
!!! GGTCATACTCGTAAATTTTT+TGG + chr1.2:60545417-60545436 None:intergenic 30.0%
AACAAAGGTCTTAAATGGGA+CGG - chr1.2:60546141-60546160 MS.gene91534:CDS 35.0%
ATACATAATGTGAGTCCACT+CGG - chr1.2:60545739-60545758 MS.gene91534:intron 35.0%
ATAGTAGTGTGTATGTAAGC+TGG - chr1.2:60546188-60546207 MS.gene91534:CDS 35.0%
ATTGTTGGATCAAGATCAGA+CGG - chr1.2:60544746-60544765 MS.gene91534:intron 35.0%
ATTTCTGCTATTCAAAGCTC+GGG - chr1.2:60545262-60545281 MS.gene91534:CDS 35.0%
CAAGCCAAATGAATCCAAAT+AGG + chr1.2:60545138-60545157 None:intergenic 35.0%
CCAAAGATTATTTCGAGAAG+GGG - chr1.2:60545440-60545459 MS.gene91534:intron 35.0%
CGACAGTCATTAAACTTGTA+TGG - chr1.2:60546025-60546044 MS.gene91534:intron 35.0%
GCCAAAGATTATTTCGAGAA+GGG - chr1.2:60545439-60545458 MS.gene91534:intron 35.0%
GCCATTCTTAAATGCCTATT+TGG - chr1.2:60545121-60545140 MS.gene91534:intron 35.0%
GGAGAAACAAAGGTCTTAAA+TGG - chr1.2:60546136-60546155 MS.gene91534:CDS 35.0%
TAGTAGTGTGTATGTAAGCT+GGG - chr1.2:60546189-60546208 MS.gene91534:CDS 35.0%
TATCCAACAGCTTTCAACTT+TGG - chr1.2:60544208-60544227 MS.gene91534:CDS 35.0%
TATCCACAACAAGCCATAAT+TGG + chr1.2:60546076-60546095 None:intergenic 35.0%
TCTATGTATTCACGTAATCC+GGG + chr1.2:60544871-60544890 None:intergenic 35.0%
TTCTCGAAATAATCTTTGGC+CGG + chr1.2:60545439-60545458 None:intergenic 35.0%
TTGGAATTGAGGCAATTATC+TGG + chr1.2:60545528-60545547 None:intergenic 35.0%
! GTTGTGAGTAATTTGCAATG+AGG + chr1.2:60545954-60545973 None:intergenic 35.0%
! TTGCATCCATGATGGAAATT+TGG + chr1.2:60545161-60545180 None:intergenic 35.0%
! TTGGCTCATACTTGTTAGTA+TGG + chr1.2:60544648-60544667 None:intergenic 35.0%
! TTTTGATGCAGTGAATGCAA+CGG - chr1.2:60545094-60545113 MS.gene91534:intron 35.0%
!! AAGTCAACAGAATTTGCTAC+AGG + chr1.2:60544184-60544203 None:intergenic 35.0%
!! ATTATGGCTTGTTGTGGATA+TGG - chr1.2:60546076-60546095 MS.gene91534:intron 35.0%
!! TGATGCAACATATCGATTTG+TGG + chr1.2:60546236-60546255 None:intergenic 35.0%
!!! TGCAATGAGGTCTAGTTTTA+TGG + chr1.2:60545941-60545960 None:intergenic 35.0%
AATCACTTCAAAACTCCGTC+TGG - chr1.2:60544301-60544320 MS.gene91534:CDS 40.0%
ACGCGACTATCATAGTTCAA+CGG + chr1.2:60546109-60546128 None:intergenic 40.0%
ACGGTCTGATCTTGATTCAA+CGG - chr1.2:60544835-60544854 MS.gene91534:intron 40.0%
AGGGTTTGAACAGCCAATTA+TGG - chr1.2:60546060-60546079 MS.gene91534:intron 40.0%
ATCACTTCAAAACTCCGTCT+GGG - chr1.2:60544302-60544321 MS.gene91534:CDS 40.0%
ATGCTTCGGTTGCATGAATA+GGG - chr1.2:60544536-60544555 MS.gene91534:CDS 40.0%
CCAACAATCTTCAACTTCTC+TGG + chr1.2:60544734-60544753 None:intergenic 40.0%
CCAGAGAAGTTGAAGATTGT+TGG - chr1.2:60544731-60544750 MS.gene91534:intron 40.0%
CCATCAAAGCTTGATGAACT+AGG - chr1.2:60545799-60545818 MS.gene91534:intron 40.0%
CCCCTTCTCGAAATAATCTT+TGG + chr1.2:60545443-60545462 None:intergenic 40.0%
CGTAGCTAAGAGAGATCTAA+CGG + chr1.2:60544499-60544518 None:intergenic 40.0%
CGTTAGATCTCTCTTAGCTA+CGG - chr1.2:60544497-60544516 MS.gene91534:CDS 40.0%
CGTTTCTTGTGGAGAAACAA+AGG - chr1.2:60546126-60546145 MS.gene91534:CDS 40.0%
GGCCAAAGATTATTTCGAGA+AGG - chr1.2:60545438-60545457 MS.gene91534:intron 40.0%
GTTGCATCACAAATTCTCAC+TGG - chr1.2:60546247-60546266 MS.gene91534:CDS 40.0%
TATGATAGTCGCGTTTCTTG+TGG - chr1.2:60546115-60546134 MS.gene91534:CDS 40.0%
TCACCAAAGTTGAAAGCTGT+TGG + chr1.2:60544214-60544233 None:intergenic 40.0%
TCTCGAAATAATCTTTGGCC+GGG + chr1.2:60545438-60545457 None:intergenic 40.0%
TCTTAGCTACGGAAAACACA+GGG - chr1.2:60544508-60544527 MS.gene91534:CDS 40.0%
TTGAAGTGATTCTGTCCGTA+AGG + chr1.2:60544292-60544311 None:intergenic 40.0%
! CAACTTTGGTGATTCAACCT+CGG - chr1.2:60544222-60544241 MS.gene91534:CDS 40.0%
! CCTAGTTCATCAAGCTTTGA+TGG + chr1.2:60545802-60545821 None:intergenic 40.0%
! TGATGGATCAGTGCCAAATT+GGG + chr1.2:60545785-60545804 None:intergenic 40.0%
! TTGATGGATCAGTGCCAAAT+TGG + chr1.2:60545786-60545805 None:intergenic 40.0%
!! CGCGTTTTATTCACAAGACT+TGG - chr1.2:60545501-60545520 MS.gene91534:intron 40.0%
AACACAGGGCTTACATGCTT+CGG - chr1.2:60544522-60544541 MS.gene91534:CDS 45.0%
AAGTGATTCTGTCCGTAAGG+TGG + chr1.2:60544289-60544308 None:intergenic 45.0%
AGTGATTCTGTCCGTAAGGT+GGG + chr1.2:60544288-60544307 None:intergenic 45.0%
AGTGTGTATGTAAGCTGGGA+TGG - chr1.2:60546193-60546212 MS.gene91534:CDS 45.0%
CAGCTAAGTTGTGTTCACGA+AGG + chr1.2:60545828-60545847 None:intergenic 45.0%
CATGCTTCGGTTGCATGAAT+AGG - chr1.2:60544535-60544554 MS.gene91534:CDS 45.0%
CCATCACAAAATCTCCCAGA+CGG + chr1.2:60544319-60544338 None:intergenic 45.0%
CGACTATCATAGTTCAACGG+CGG + chr1.2:60546106-60546125 None:intergenic 45.0%
CGGGTTCTCAAATTACTTGC+AGG - chr1.2:60545281-60545300 MS.gene91534:CDS 45.0%
CTCTTAGCTACGGAAAACAC+AGG - chr1.2:60544507-60544526 MS.gene91534:CDS 45.0%
CTGCAAAGTTGCATCCATGA+TGG + chr1.2:60545169-60545188 None:intergenic 45.0%
GGCTTGCCAAATTTCCATCA+TGG - chr1.2:60545152-60545171 MS.gene91534:CDS 45.0%
TGACAGAGACTGTATGACAG+CGG - chr1.2:60545700-60545719 MS.gene91534:intron 45.0%
TGCTTCGGTTGCATGAATAG+GGG - chr1.2:60544537-60544556 MS.gene91534:CDS 45.0%
!! ATGGCTTGTTGTGGATATGG+AGG - chr1.2:60546079-60546098 MS.gene91534:CDS 45.0%
!! CAGCCAATTATGGCTTGTTG+TGG - chr1.2:60546070-60546089 MS.gene91534:intron 45.0%
!! TATATATATATATATATAAC+TGG - chr1.2:60545005-60545024 MS.gene91534:CDS 5.0%
AAATGAGCCAAGCATCCGAG+TGG + chr1.2:60545757-60545776 None:intergenic 50.0%
ACAGAGACTGTATGACAGCG+GGG - chr1.2:60545702-60545721 MS.gene91534:intron 50.0%
ACCTGAACCCCAAAGCTGAA+CGG + chr1.2:60545236-60545255 None:intergenic 50.0%
CAACTTCTCTGGATGCGTGA+TGG + chr1.2:60544723-60544742 None:intergenic 50.0%
GACAGAGACTGTATGACAGC+GGG - chr1.2:60545701-60545720 MS.gene91534:intron 50.0%
GATCAGTCCGTTCAGCTTTG+GGG - chr1.2:60545226-60545245 MS.gene91534:CDS 50.0%
GGATCAGTCCGTTCAGCTTT+GGG - chr1.2:60545225-60545244 MS.gene91534:CDS 50.0%
GGATGCAACTTTGCAGCATC+AGG - chr1.2:60545173-60545192 MS.gene91534:CDS 50.0%
GGGACGGTAGTTACAGCAAA+AGG - chr1.2:60546157-60546176 MS.gene91534:CDS 50.0%
GTGATTCTGTCCGTAAGGTG+GGG + chr1.2:60544287-60544306 None:intergenic 50.0%
TGATTCTGTCCGTAAGGTGG+GGG + chr1.2:60544286-60544305 None:intergenic 50.0%
! ACAGCGGGGCTAGGAATTTT+TGG - chr1.2:60545716-60545735 MS.gene91534:intron 50.0%
! CCGTCTGGGAGATTTTGTGA+TGG - chr1.2:60544316-60544335 MS.gene91534:CDS 50.0%
! CTGGGATGGCGCTCATTTTA+CGG - chr1.2:60546207-60546226 MS.gene91534:CDS 50.0%
CGGATCAGTCCGTTCAGCTT+TGG - chr1.2:60545224-60545243 MS.gene91534:CDS 55.0%
GATTCAACCTCGGACACAGG+TGG - chr1.2:60544232-60544251 MS.gene91534:CDS 55.0%
GATTCTGTCCGTAAGGTGGG+GGG + chr1.2:60544285-60544304 None:intergenic 55.0%
GGTGATTCAACCTCGGACAC+AGG - chr1.2:60544229-60544248 MS.gene91534:CDS 55.0%
TGTGAGTCCACTCGGATGCT+TGG - chr1.2:60545747-60545766 MS.gene91534:intron 55.0%
TTCAACGGTCACTGACGTCC+CGG - chr1.2:60544850-60544869 MS.gene91534:intron 55.0%
TTCTTCCACCAACTGCAGCG+CGG - chr1.2:60545204-60545223 MS.gene91534:CDS 55.0%
! GGATGGCGCTCATTTTACGG+AGG - chr1.2:60546210-60546229 MS.gene91534:CDS 55.0%
! TGCGTGATGGAGTCGATTGC+TGG + chr1.2:60544710-60544729 None:intergenic 55.0%
!! TCCGTTCAGCTTTGGGGTTC+AGG - chr1.2:60545232-60545251 MS.gene91534:CDS 55.0%
AACACGTCCACCTGTGTCCG+AGG + chr1.2:60544242-60544261 None:intergenic 60.0%
CTTCCACTCCCCCCACCTTA+CGG - chr1.2:60544274-60544293 MS.gene91534:CDS 60.0%
GACTGTATGACAGCGGGGCT+AGG - chr1.2:60545707-60545726 MS.gene91534:intron 60.0%
GGTGGACGTGTTGCAGCCTT+TGG - chr1.2:60544250-60544269 MS.gene91534:CDS 60.0%
CGTAAGGTGGGGGGAGTGGA+AGG + chr1.2:60544276-60544295 None:intergenic 65.0%
CTGATCCGCGCTGCAGTTGG+TGG + chr1.2:60545212-60545231 None:intergenic 65.0%
GGACTGATCCGCGCTGCAGT+TGG + chr1.2:60545215-60545234 None:intergenic 65.0%
TGGGGGGAGTGGAAGGCCAA+AGG + chr1.2:60544269-60544288 None:intergenic 65.0%
TGTCCGTAAGGTGGGGGGAG+TGG + chr1.2:60544280-60544299 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 60544127 60546312 60544127 ID=MS.gene91534
chr1.2 mRNA 60544127 60546312 60544127 ID=MS.gene91534.t1;Parent=MS.gene91534
chr1.2 exon 60546078 60546312 60546078 ID=MS.gene91534.t1.exon1;Parent=MS.gene91534.t1
chr1.2 CDS 60546078 60546312 60546078 ID=cds.MS.gene91534.t1;Parent=MS.gene91534.t1
chr1.2 exon 60545137 60545334 60545137 ID=MS.gene91534.t1.exon2;Parent=MS.gene91534.t1
chr1.2 CDS 60545137 60545334 60545137 ID=cds.MS.gene91534.t1;Parent=MS.gene91534.t1
chr1.2 exon 60544860 60545026 60544860 ID=MS.gene91534.t1.exon3;Parent=MS.gene91534.t1
chr1.2 CDS 60544860 60545026 60544860 ID=cds.MS.gene91534.t1;Parent=MS.gene91534.t1
chr1.2 exon 60544463 60544733 60544463 ID=MS.gene91534.t1.exon4;Parent=MS.gene91534.t1
chr1.2 CDS 60544463 60544733 60544463 ID=cds.MS.gene91534.t1;Parent=MS.gene91534.t1
chr1.2 exon 60544127 60544377 60544127 ID=MS.gene91534.t1.exon5;Parent=MS.gene91534.t1
chr1.2 CDS 60544127 60544377 60544127 ID=cds.MS.gene91534.t1;Parent=MS.gene91534.t1
Gene Sequence

>MS.gene91534

ATGGATTCTAAGTATGTTGTTGCTTTTCAAGTTGTGTTCTTTTGCATATCTTTGCCTGTAGCAAATTCTGTTGACTTCAGTTATCCAACAGCTTTCAACTTTGGTGATTCAACCTCGGACACAGGTGGACGTGTTGCAGCCTTTGGCCTTCCACTCCCCCCACCTTACGGACAGAATCACTTCAAAACTCCGTCTGGGAGATTTTGTGATGGTCGTCTCATACTTGACTTCTTAAGTAAGTTTTAAATCCTTTTATGAAATTTTCGTAGTTATTATATGTTATCTATCTATACGAACAAGAAAAAGTCGTCTCATGTAGTTTGAGAAATGAGACTAAAAGTAGTTTATAAACATCAATGTTTTTCAACTCCGTTAGATCTCTCTTAGCTACGGAAAACACAGGGCTTACATGCTTCGGTTGCATGAATAGGGGTTTGATTTGACACTTATTTTCTCATCAACTTTAAAGGTAAAGGATAGTATAATTTAATGATTTATTGATTATAAATGAGTTATTTCCATACTAACAAGTATGAGCCAACAAACGAAACATCTTATGTTACATACGGATTTGCTGCATCCAGCAATCGACTCCATCACGCATCCAGAGAAGTTGAAGATTGTTGGATCAAGATCAGACGGTTCATATTTCAATGCGTATTTTGATTTTTGCAAAAGAAAAACCGAAATTCTGTTCTTAAAATCTGGACGGTCTGATCTTGATTCAACGGTCACTGACGTCCCGGATTACGTGAATACATAGATTGCTGATTGCATCAAATTCAAATCAAGCATATATTTTTTTTTTGACAAGCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAACTGGTATTTGGAAATAAGAAAGGTTACACTGTCATATAATGGTTCTATTCTATCCAATGCAATTCTGGTTTTTTGATGCAGTGAATGCAACGGACTTGCCATTCTTAAATGCCTATTTGGATTCATTTGGCTTGCCAAATTTCCATCATGGATGCAACTTTGCAGCATCAGGTTCATCTATTCTTCCACCAACTGCAGCGCGGATCAGTCCGTTCAGCTTTGGGGTTCAGGTATCTCAATTTCTGCTATTCAAAGCTCGGGTTCTCAAATTACTTGCAGGTATATGATAAGTTAATTCAAATATCTTTATATCGCTTCACTGTCAAAACCAACTTTGTTTTTCTCTAATTCATTCATGTGGAACAAAAATGATCACAATCATGTTTCAGGCCAAAAAATTTACGAGTATGACCCGGCCAAAGATTATTTCGAGAAGGGGTTATACATTTTTGAAATAGGTCGGAATGATCTTACTATCGCGTTTTATTCACAAGACTTGGACCAGATAATTGCCTCAATTCCAACAATTCTATTGGAATTTGAAACTGGAATAAAGGTTGGTGACAGTGCCTAACAAATTAGTAATGAATTGGTACATTTTTTATCCTAAAATATTCTTGAACTCAAGAATATATAAATAGTTTTGATAAAATTAACACTCGCTCTTTTATTTGTGTGACAGAGACTGTATGACAGCGGGGCTAGGAATTTTTGGATACATAATGTGAGTCCACTCGGATGCTTGGCTCATTTTATTTCCCAATTTGGCACTGATCCATCAAAGCTTGATGAACTAGGATGCCTTCGTGAACACAACTTAGCTGCTAAATCTTTTAATCTATATCTACAAGATTTCTGTAGTAAATTGCATGGCCAGTATCCAGATGTAAATGTTACATATGTTGATATCTTTACCATAAAACTAGACCTCATTGCAAATTACTCACAACATGGTAAGTAAAACTAGCAAAAGTTCAATATCATTGCTTCAGCAAAACTCACGACAGTCATTAAACTTGTATGGTTATTTGTTTGCAGGGTTTGAACAGCCAATTATGGCTTGTTGTGGATATGGAGGTCCGCCGTTGAACTATGATAGTCGCGTTTCTTGTGGAGAAACAAAGGTCTTAAATGGGACGGTAGTTACAGCAAAAGGTTGCAATGATAGTAGTGTGTATGTAAGCTGGGATGGCGCTCATTTTACGGAGGCCACAAATCGATATGTTGCATCACAAATTCTCACTGGAAATTACATTAACACTCATTTGCCAGAAAAGATGTCATTCTAA
Protein sequence

>MS.gene91534.t1

MDSKYVVAFQVVFFCISLPVANSVDFSYPTAFNFGDSTSDTGGRVAAFGLPLPPPYGQNHFKTPSGRFCDGRLILDFLMNATDLPFLNAYLDSFGLPNFHHGCNFAASGSSILPPTAARISPFSFGVQVSQFLLFKARVLKLLAGQKIYEYDPAKDYFEKGLYIFEIGRNDLTIAFYSQDLDQIIASIPTILLEFETGIKRLYDSGARNFWIHNVSPLGCLAHFISQFGTDPSKLDELGCLREHNLAAKSFNLYLQDFCSKLHGQYPDVNVTYVDIFTIKLDLIANYSQHGFEQPIMACCGYGGPPLNYDSRVSCGETKVLNGTVVTAKGCNDSSVYVSWDGAHFTEATNRYVASQILTGNYINTHLPEKMSF