Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91601.t1 | O22309.1 | 99.7 | 352 | 1 | 0 | 1 | 352 | 1 | 352 | 3.10E-202 | 714.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91601.t1 | O22309 | 99.7 | 352 | 1 | 0 | 1 | 352 | 1 | 352 | 7.4e-205 | 714.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91601.t1 | Q1EDY7 | 97.4 | 352 | 9 | 0 | 1 | 352 | 1 | 352 | 4.3e-198 | 699.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04998 | MS.gene91601 | 0.810507 | 1.11E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91601.t1 | MTR_7g014570 | 97.443 | 352 | 9 | 0 | 1 | 352 | 1 | 352 | 0.0 | 709 |
| MS.gene91601.t1 | MTR_7g014510 | 80.672 | 357 | 64 | 1 | 1 | 352 | 1 | 357 | 0.0 | 619 |
| MS.gene91601.t1 | MTR_1g076940 | 58.449 | 361 | 141 | 3 | 1 | 352 | 1 | 361 | 6.32e-153 | 434 |
| MS.gene91601.t1 | MTR_4g088345 | 58.146 | 356 | 145 | 3 | 1 | 352 | 1 | 356 | 2.01e-146 | 417 |
| MS.gene91601.t1 | MTR_7g024500 | 55.429 | 350 | 149 | 3 | 4 | 350 | 3 | 348 | 5.42e-138 | 396 |
| MS.gene91601.t1 | MTR_4g088340 | 57.057 | 333 | 139 | 3 | 24 | 352 | 1 | 333 | 1.26e-135 | 389 |
| MS.gene91601.t1 | MTR_7g024520 | 53.143 | 350 | 157 | 3 | 4 | 350 | 3 | 348 | 1.16e-132 | 382 |
| MS.gene91601.t1 | MTR_4g033015 | 52.342 | 363 | 162 | 4 | 1 | 352 | 1 | 363 | 1.13e-124 | 363 |
| MS.gene91601.t1 | MTR_4g033200 | 52.342 | 363 | 162 | 4 | 1 | 352 | 1 | 363 | 8.77e-124 | 360 |
| MS.gene91601.t1 | MTR_4g088200 | 48.753 | 361 | 176 | 4 | 1 | 352 | 1 | 361 | 8.32e-121 | 353 |
| MS.gene91601.t1 | MTR_4g033150 | 50.964 | 363 | 167 | 4 | 1 | 352 | 1 | 363 | 1.50e-117 | 345 |
| MS.gene91601.t1 | MTR_4g088190 | 50.275 | 364 | 169 | 5 | 1 | 352 | 1 | 364 | 2.81e-116 | 341 |
| MS.gene91601.t1 | MTR_5g074600 | 48.138 | 349 | 174 | 5 | 11 | 352 | 11 | 359 | 7.00e-116 | 340 |
| MS.gene91601.t1 | MTR_4g079160 | 47.110 | 346 | 179 | 4 | 11 | 352 | 10 | 355 | 9.69e-116 | 340 |
| MS.gene91601.t1 | MTR_4g033170 | 51.705 | 352 | 165 | 4 | 6 | 352 | 6 | 357 | 3.34e-114 | 336 |
| MS.gene91601.t1 | MTR_5g074580 | 47.564 | 349 | 176 | 4 | 11 | 352 | 12 | 360 | 8.72e-114 | 335 |
| MS.gene91601.t1 | MTR_5g074680 | 47.701 | 348 | 175 | 5 | 11 | 351 | 12 | 359 | 1.49e-113 | 334 |
| MS.gene91601.t1 | MTR_4g033085 | 50.568 | 352 | 169 | 4 | 6 | 352 | 6 | 357 | 3.24e-107 | 318 |
| MS.gene91601.t1 | MTR_5g074540 | 43.099 | 355 | 185 | 4 | 1 | 352 | 1 | 341 | 1.12e-102 | 306 |
| MS.gene91601.t1 | MTR_5g074610 | 44.380 | 347 | 161 | 4 | 11 | 352 | 7 | 326 | 3.46e-101 | 301 |
| MS.gene91601.t1 | MTR_1g076930 | 54.545 | 242 | 101 | 4 | 24 | 256 | 1 | 242 | 1.03e-82 | 251 |
| MS.gene91601.t1 | MTR_0794s0020 | 48.594 | 249 | 118 | 3 | 1 | 239 | 1 | 249 | 2.36e-75 | 233 |
| MS.gene91601.t1 | MTR_3g083620 | 34.524 | 336 | 208 | 7 | 20 | 348 | 27 | 357 | 5.67e-62 | 202 |
| MS.gene91601.t1 | MTR_0017s0100 | 33.422 | 374 | 221 | 9 | 1 | 352 | 1 | 368 | 1.06e-59 | 196 |
| MS.gene91601.t1 | MTR_4g038440 | 33.708 | 356 | 219 | 8 | 8 | 352 | 19 | 368 | 4.71e-58 | 192 |
| MS.gene91601.t1 | MTR_0079s0070 | 34.718 | 337 | 203 | 8 | 27 | 352 | 4 | 334 | 1.10e-56 | 187 |
| MS.gene91601.t1 | MTR_3g092900 | 30.612 | 343 | 220 | 6 | 10 | 338 | 11 | 349 | 7.26e-44 | 155 |
| MS.gene91601.t1 | MTR_8g024160 | 32.042 | 284 | 175 | 6 | 75 | 344 | 42 | 321 | 1.86e-43 | 153 |
| MS.gene91601.t1 | MTR_1g036460 | 31.845 | 336 | 208 | 8 | 33 | 351 | 38 | 369 | 5.99e-43 | 153 |
| MS.gene91601.t1 | MTR_1g036490 | 29.494 | 356 | 224 | 8 | 14 | 351 | 23 | 369 | 2.38e-41 | 149 |
| MS.gene91601.t1 | MTR_7g118300 | 30.818 | 318 | 205 | 6 | 31 | 337 | 47 | 360 | 3.02e-41 | 148 |
| MS.gene91601.t1 | MTR_7g011900 | 28.614 | 332 | 221 | 7 | 33 | 351 | 41 | 369 | 1.41e-40 | 146 |
| MS.gene91601.t1 | MTR_7g012040 | 29.022 | 317 | 211 | 6 | 33 | 338 | 40 | 353 | 1.89e-40 | 146 |
| MS.gene91601.t1 | MTR_7g012070 | 28.704 | 324 | 209 | 7 | 33 | 338 | 41 | 360 | 2.64e-40 | 146 |
| MS.gene91601.t1 | MTR_5g098170 | 32.110 | 327 | 195 | 8 | 31 | 339 | 33 | 350 | 1.36e-39 | 144 |
| MS.gene91601.t1 | MTR_8g068750 | 28.076 | 317 | 210 | 6 | 31 | 333 | 46 | 358 | 5.15e-39 | 142 |
| MS.gene91601.t1 | MTR_7g011990 | 27.410 | 332 | 222 | 7 | 33 | 351 | 41 | 366 | 5.35e-39 | 142 |
| MS.gene91601.t1 | MTR_7g012090 | 28.107 | 338 | 220 | 8 | 33 | 351 | 41 | 374 | 6.90e-39 | 142 |
| MS.gene91601.t1 | MTR_1g096310 | 29.141 | 326 | 204 | 8 | 33 | 339 | 41 | 358 | 1.54e-38 | 141 |
| MS.gene91601.t1 | MTR_8g068690 | 29.245 | 318 | 207 | 6 | 31 | 334 | 45 | 358 | 3.66e-38 | 140 |
| MS.gene91601.t1 | MTR_0591s0010 | 27.900 | 319 | 208 | 7 | 31 | 333 | 46 | 358 | 8.82e-38 | 139 |
| MS.gene91601.t1 | MTR_8g068870 | 28.659 | 328 | 216 | 6 | 24 | 337 | 25 | 348 | 1.20e-37 | 138 |
| MS.gene91601.t1 | MTR_7g118320 | 27.987 | 318 | 211 | 7 | 30 | 333 | 30 | 343 | 1.40e-37 | 138 |
| MS.gene91601.t1 | MTR_7g012020 | 27.108 | 332 | 226 | 7 | 33 | 351 | 40 | 368 | 2.85e-36 | 135 |
| MS.gene91601.t1 | MTR_1g036510 | 29.412 | 272 | 170 | 4 | 69 | 339 | 119 | 369 | 5.86e-36 | 134 |
| MS.gene91601.t1 | MTR_3g021440 | 28.481 | 316 | 213 | 4 | 33 | 338 | 43 | 355 | 4.07e-35 | 132 |
| MS.gene91601.t1 | MTR_6g078850 | 30.120 | 249 | 163 | 6 | 94 | 337 | 126 | 368 | 6.36e-35 | 134 |
| MS.gene91601.t1 | MTR_3g021430 | 28.438 | 320 | 208 | 8 | 33 | 338 | 30 | 342 | 9.31e-35 | 130 |
| MS.gene91601.t1 | MTR_2g072790 | 30.696 | 316 | 207 | 6 | 31 | 337 | 27 | 339 | 1.24e-34 | 130 |
| MS.gene91601.t1 | MTR_2g055940 | 31.915 | 235 | 149 | 5 | 122 | 351 | 134 | 362 | 1.73e-34 | 130 |
| MS.gene91601.t1 | MTR_3g096050 | 27.887 | 355 | 237 | 11 | 9 | 351 | 10 | 357 | 2.45e-33 | 127 |
| MS.gene91601.t1 | MTR_4g038440 | 31.373 | 255 | 163 | 5 | 8 | 253 | 19 | 270 | 1.24e-31 | 120 |
| MS.gene91601.t1 | MTR_3g096070 | 28.875 | 329 | 196 | 12 | 32 | 349 | 31 | 332 | 1.09e-29 | 116 |
| MS.gene91601.t1 | MTR_8g068730 | 27.445 | 317 | 180 | 7 | 31 | 333 | 46 | 326 | 9.35e-29 | 114 |
| MS.gene91601.t1 | MTR_8g068570 | 34.969 | 163 | 101 | 2 | 159 | 319 | 158 | 317 | 1.30e-28 | 113 |
| MS.gene91601.t1 | MTR_7g012020 | 28.216 | 241 | 161 | 5 | 33 | 261 | 40 | 280 | 1.24e-23 | 99.4 |
| MS.gene91601.t1 | MTR_1g050220 | 32.000 | 150 | 88 | 3 | 188 | 336 | 151 | 287 | 3.21e-21 | 92.8 |
| MS.gene91601.t1 | MTR_8g068600 | 27.225 | 191 | 129 | 3 | 73 | 254 | 65 | 254 | 5.81e-21 | 91.7 |
| MS.gene91601.t1 | MTR_8g068690 | 26.050 | 238 | 163 | 4 | 31 | 256 | 45 | 281 | 7.34e-20 | 88.6 |
| MS.gene91601.t1 | MTR_8g068740 | 26.104 | 249 | 139 | 5 | 31 | 267 | 46 | 261 | 2.82e-18 | 84.0 |
| MS.gene91601.t1 | MTR_1g036510 | 29.189 | 185 | 113 | 2 | 69 | 253 | 119 | 285 | 4.46e-18 | 84.0 |
| MS.gene91601.t1 | MTR_8g068620 | 34.021 | 97 | 64 | 0 | 157 | 253 | 14 | 110 | 4.75e-16 | 73.9 |
| MS.gene91601.t1 | MTR_7g012020 | 27.317 | 205 | 138 | 4 | 33 | 226 | 40 | 244 | 1.03e-15 | 76.3 |
| MS.gene91601.t1 | MTR_4g025570 | 39.583 | 96 | 53 | 4 | 255 | 348 | 122 | 214 | 1.01e-11 | 64.3 |
| MS.gene91601.t1 | MTR_8g068760 | 36.000 | 100 | 50 | 3 | 245 | 333 | 118 | 214 | 3.46e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91601.t1 | AT4G35150 | 33.714 | 350 | 179 | 10 | 15 | 351 | 14 | 323 | 8.70e-55 | 182 |
| MS.gene91601.t1 | AT4G35160 | 34.358 | 358 | 209 | 10 | 15 | 351 | 28 | 380 | 1.46e-52 | 178 |
| MS.gene91601.t1 | AT5G54160 | 29.661 | 354 | 231 | 8 | 10 | 350 | 11 | 359 | 1.54e-44 | 157 |
| MS.gene91601.t1 | AT3G53140 | 30.030 | 333 | 216 | 8 | 31 | 349 | 27 | 356 | 4.77e-36 | 134 |
| MS.gene91601.t1 | AT1G51990 | 29.110 | 292 | 194 | 6 | 71 | 352 | 74 | 362 | 1.27e-35 | 133 |
| MS.gene91601.t1 | AT1G51990 | 29.932 | 294 | 189 | 8 | 71 | 352 | 74 | 362 | 3.90e-35 | 132 |
| MS.gene91601.t1 | AT1G33030 | 29.167 | 336 | 216 | 12 | 31 | 351 | 21 | 349 | 5.01e-34 | 129 |
| MS.gene91601.t1 | AT1G77520 | 28.750 | 320 | 212 | 8 | 37 | 351 | 72 | 380 | 1.87e-31 | 122 |
| MS.gene91601.t1 | AT5G53810 | 28.814 | 354 | 203 | 9 | 31 | 351 | 40 | 377 | 9.90e-28 | 112 |
| MS.gene91601.t1 | AT1G63140 | 28.125 | 352 | 221 | 8 | 24 | 351 | 37 | 380 | 5.64e-26 | 107 |
| MS.gene91601.t1 | AT1G63140 | 28.125 | 352 | 221 | 8 | 24 | 351 | 57 | 400 | 8.52e-26 | 107 |
| MS.gene91601.t1 | AT5G37170 | 31.683 | 202 | 125 | 6 | 157 | 351 | 38 | 233 | 1.02e-25 | 103 |
| MS.gene91601.t1 | AT5G37170 | 32.000 | 200 | 123 | 6 | 159 | 351 | 140 | 333 | 3.98e-25 | 104 |
| MS.gene91601.t1 | AT5G37170 | 33.333 | 174 | 106 | 5 | 185 | 351 | 15 | 185 | 4.07e-24 | 98.2 |
| MS.gene91601.t1 | AT1G62900 | 31.863 | 204 | 133 | 3 | 151 | 351 | 4 | 204 | 1.43e-23 | 97.1 |
| MS.gene91601.t1 | AT1G77530 | 30.435 | 230 | 149 | 4 | 130 | 351 | 154 | 380 | 2.07e-23 | 100 |
| MS.gene91601.t1 | AT1G21130 | 34.286 | 140 | 86 | 3 | 202 | 338 | 223 | 359 | 9.47e-21 | 92.4 |
| MS.gene91601.t1 | AT1G21100 | 34.286 | 140 | 86 | 3 | 202 | 338 | 223 | 359 | 1.13e-20 | 92.4 |
| MS.gene91601.t1 | AT1G76790 | 29.258 | 229 | 148 | 5 | 111 | 333 | 126 | 346 | 5.44e-20 | 90.5 |
| MS.gene91601.t1 | AT1G21110 | 24.104 | 307 | 197 | 9 | 41 | 335 | 74 | 356 | 1.21e-19 | 89.4 |
| MS.gene91601.t1 | AT1G21120 | 33.571 | 140 | 87 | 3 | 202 | 338 | 223 | 359 | 1.90e-19 | 89.0 |
| MS.gene91601.t1 | AT1G21120 | 33.571 | 140 | 87 | 3 | 202 | 338 | 271 | 407 | 3.73e-19 | 88.6 |
| MS.gene91601.t1 | AT1G33030 | 28.511 | 235 | 153 | 8 | 31 | 253 | 21 | 252 | 6.35e-17 | 80.1 |
| MS.gene91601.t1 | AT1G33030 | 28.511 | 235 | 153 | 8 | 31 | 253 | 21 | 252 | 1.36e-16 | 79.3 |
Find 61 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGATTCCATGTCTCTTAAA+TGG | 0.124329 | 7.4:+84871705 | MS.gene91601:CDS |
| ACTAAATTTGAAAGGGAAAT+TGG | 0.143823 | 7.4:-84871773 | None:intergenic |
| TAAAGTATATTCTACATAAT+TGG | 0.192870 | 7.4:+84874168 | MS.gene91601:intron |
| GTTCTTGATCCAACTCTTTC+GGG | 0.231957 | 7.4:+84871974 | MS.gene91601:CDS |
| CCATGGTTGTGAATAATATT+TGG | 0.249252 | 7.4:-84871746 | None:intergenic |
| ACACTCTTTGGTGTTACTTT+AGG | 0.251861 | 7.4:+84872040 | MS.gene91601:CDS |
| GTAAACATGGCTTGTCTAAA+TGG | 0.252716 | 7.4:+84874338 | MS.gene91601:CDS |
| TGTTCTTGATCCAACTCTTT+CGG | 0.264765 | 7.4:+84871973 | MS.gene91601:CDS |
| TACTCAAATTAAGCTCCTTA+TGG | 0.296566 | 7.4:+84874313 | MS.gene91601:CDS |
| TTAAATGATGTATTATATTC+AGG | 0.298723 | 7.4:-84872094 | None:intergenic |
| GAGGAAGATCTTACACTCTT+TGG | 0.320824 | 7.4:+84872028 | MS.gene91601:CDS |
| GCTTCAGAGCTTCTTGTTAG+AGG | 0.330458 | 7.4:+84871917 | MS.gene91601:CDS |
| CAAGTTCCATCGTCGAAAAT+AGG | 0.334139 | 7.4:+84871806 | MS.gene91601:CDS |
| AAAATGGCTTCATCAATTAA+TGG | 0.353999 | 7.4:+84871620 | None:intergenic |
| TTTGGTGTTACTTTAGGATC+TGG | 0.377403 | 7.4:+84872046 | MS.gene91601:CDS |
| AAAGAAGCTGTTACAAATGA+TGG | 0.378738 | 7.4:+84874227 | MS.gene91601:CDS |
| CAAGTTGTAGAGAACTTATC+TGG | 0.380400 | 7.4:+84872286 | MS.gene91601:CDS |
| TCTACATAATTGGACTGATA+AGG | 0.410849 | 7.4:+84874178 | MS.gene91601:CDS |
| TGAAATGTATTGTGTTTGAT+AGG | 0.411209 | 7.4:+84872260 | MS.gene91601:CDS |
| GTGGATGTTGGTGGTGGAAC+TGG | 0.416127 | 7.4:+84872199 | MS.gene91601:CDS |
| AAGAGAGAAATGAGGAAGAA+TGG | 0.419676 | 7.4:+84874363 | MS.gene91601:CDS |
| AGCAAAACTGCATCAGCATT+AGG | 0.422726 | 7.4:-84872355 | None:intergenic |
| TGATTCTAAATTGATAAACT+TGG | 0.458151 | 7.4:+84872132 | MS.gene91601:CDS |
| CGTATCATGAGCTGAAGAAA+TGG | 0.458512 | 7.4:+84871999 | MS.gene91601:CDS |
| AACACAATACATTTCAACTT+AGG | 0.473166 | 7.4:-84872253 | None:intergenic |
| AGCAATAATTTGACTTATGT+TGG | 0.474211 | 7.4:+84872310 | MS.gene91601:CDS |
| AGATTCCATGTCTCTTAAAT+GGG | 0.476440 | 7.4:+84871706 | MS.gene91601:CDS |
| TGATCTTTGTTTAGCACCAA+TGG | 0.482495 | 7.4:+84871943 | MS.gene91601:CDS |
| TATAAGATATCTCCTTTGAC+TGG | 0.490146 | 7.4:+84874419 | MS.gene91601:CDS |
| GCTGAAGAAATGGATTTATG+AGG | 0.492483 | 7.4:+84872009 | MS.gene91601:CDS |
| AAGAAACTCTTCATAGAAGC+TGG | 0.494387 | 7.4:+84874386 | MS.gene91601:CDS |
| GTTACAAATGATGGGAAAAG+AGG | 0.507671 | 7.4:+84874236 | MS.gene91601:CDS |
| ATAATTTGACTTATGTTGGT+GGG | 0.511853 | 7.4:+84872314 | MS.gene91601:CDS |
| AACAGCCCATTTAAGAGACA+TGG | 0.517213 | 7.4:-84871711 | None:intergenic |
| AATTGAAACTAAATTTGAAA+GGG | 0.517613 | 7.4:-84871780 | None:intergenic |
| TGATGGATTGGAATCAATTG+TGG | 0.517617 | 7.4:+84872180 | MS.gene91601:CDS |
| TACATTTCTTCAGTATCCTT+AGG | 0.521367 | 7.4:-84874205 | None:intergenic |
| AAGCCATGTTTACATCCATA+AGG | 0.522966 | 7.4:-84874328 | None:intergenic |
| AAGGAGATATCTTATAGTGT+TGG | 0.524379 | 7.4:-84874412 | None:intergenic |
| TTGGAATCAATTGTGGATGT+TGG | 0.527463 | 7.4:+84872187 | MS.gene91601:CDS |
| AAGAGACATGGAATCTATGA+AGG | 0.530607 | 7.4:-84871699 | None:intergenic |
| GAATTGAAACTAAATTTGAA+AGG | 0.535999 | 7.4:-84871781 | None:intergenic |
| TAATTTGACTTATGTTGGTG+GGG | 0.537579 | 7.4:+84872315 | MS.gene91601:CDS |
| TACATCATTTAATGATGCAA+TGG | 0.539653 | 7.4:+84872105 | MS.gene91601:CDS |
| CGAAGAATCCGTTGTGCGCG+AGG | 0.543967 | 7.4:-84871853 | None:intergenic |
| AATAATTTGACTTATGTTGG+TGG | 0.546090 | 7.4:+84872313 | MS.gene91601:CDS |
| AAGAAGCTGTTACAAATGAT+GGG | 0.548845 | 7.4:+84874228 | MS.gene91601:CDS |
| GAATCAATTGTGGATGTTGG+TGG | 0.561061 | 7.4:+84872190 | MS.gene91601:CDS |
| GCTCCTTATGGATGTAAACA+TGG | 0.565671 | 7.4:+84874325 | MS.gene91601:CDS |
| TGATACGAACCCGAAAGAGT+TGG | 0.566568 | 7.4:-84871983 | None:intergenic |
| TCAAGAACACACTCAACCAT+TGG | 0.570476 | 7.4:-84871959 | None:intergenic |
| AAATGGAAAAGAGAGAAATG+AGG | 0.576668 | 7.4:+84874355 | MS.gene91601:CDS |
| TCAATTGTGGATGTTGGTGG+TGG | 0.576859 | 7.4:+84872193 | MS.gene91601:CDS |
| GATAAGTTCTCTACAACTTG+TGG | 0.586582 | 7.4:-84872283 | None:intergenic |
| CCAAATATTATTCACAACCA+TGG | 0.587826 | 7.4:+84871746 | MS.gene91601:CDS |
| TGTGCTTTGAAAATTTCACT+TGG | 0.587882 | 7.4:-84871650 | None:intergenic |
| AAAGGGAAATTGGTTTGCCA+TGG | 0.598802 | 7.4:-84871763 | None:intergenic |
| GGACTGATAAGGATTGCCTA+AGG | 0.617627 | 7.4:+84874189 | MS.gene91601:CDS |
| ATGCGTTACCTCGCGCACAA+CGG | 0.655418 | 7.4:+84871845 | MS.gene91601:CDS |
| AAAAGTGACTATTATAGACA+TGG | 0.668982 | 7.4:+84874259 | MS.gene91601:CDS |
| CGTCGAAAATAGGTAACGTG+CGG | 0.696937 | 7.4:+84871816 | MS.gene91601:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAATTATTTAAACCT+AGG | + | chr7.4:84872416-84872435 | MS.gene91601:intron | 10.0% |
| !! | AGTTAAATGATATATATTTA+AGG | + | chr7.4:84873225-84873244 | MS.gene91601:intron | 10.0% |
| !!! | AAATAATGAACTTTTTAAAT+AGG | - | chr7.4:84872831-84872850 | None:intergenic | 10.0% |
| !!! | TTTTAATAATATGCATAAAT+AGG | + | chr7.4:84872912-84872931 | MS.gene91601:intron | 10.0% |
| !! | AAAAGTCTATTTAAGTAAAT+AGG | - | chr7.4:84872983-84873002 | None:intergenic | 15.0% |
| !! | AATTATGTAGAATATACTTT+AGG | - | chr7.4:84874169-84874188 | None:intergenic | 15.0% |
| !! | AATTGAAACTAAATTTGAAA+GGG | - | chr7.4:84871783-84871802 | None:intergenic | 15.0% |
| !! | TAAAGTATATTCTACATAAT+TGG | + | chr7.4:84874168-84874187 | MS.gene91601:intron | 15.0% |
| !! | TTAAATGATGTATTATATTC+AGG | - | chr7.4:84872097-84872116 | None:intergenic | 15.0% |
| !!! | TAAAATTTACTTTGTTTCTT+TGG | + | chr7.4:84874043-84874062 | MS.gene91601:intron | 15.0% |
| !! | ATTCATTAAGAAATGAGTAA+AGG | - | chr7.4:84874095-84874114 | None:intergenic | 20.0% |
| !! | ATTTGTAATTGAATAGACAT+TGG | - | chr7.4:84872400-84872419 | None:intergenic | 20.0% |
| !! | CTTTGTAAAAATATTGGTAT+TGG | + | chr7.4:84873392-84873411 | MS.gene91601:intron | 20.0% |
| !! | GAATTGAAACTAAATTTGAA+AGG | - | chr7.4:84871784-84871803 | None:intergenic | 20.0% |
| !! | TAAAAGCTTATTTCACTATA+AGG | + | chr7.4:84872797-84872816 | MS.gene91601:intron | 20.0% |
| !! | TAATGACTTTAATATGTAGT+AGG | - | chr7.4:84872691-84872710 | None:intergenic | 20.0% |
| !! | TACTTCTAAATAGGTTAAAT+TGG | + | chr7.4:84872727-84872746 | MS.gene91601:intron | 20.0% |
| !! | TATAGGTTTAAATGTGTAAT+TGG | - | chr7.4:84873657-84873676 | None:intergenic | 20.0% |
| !! | TGATTCTAAATTGATAAACT+TGG | + | chr7.4:84872132-84872151 | MS.gene91601:CDS | 20.0% |
| !! | TTAAGGTTTAAATGTGTAAT+TGG | + | chr7.4:84873242-84873261 | MS.gene91601:intron | 20.0% |
| !!! | AATTTTGTCTACTTCTAAAT+AGG | + | chr7.4:84872718-84872737 | MS.gene91601:intron | 20.0% |
| !!! | CTTTGAAAAAATATTGGTAT+TGG | - | chr7.4:84873475-84873494 | None:intergenic | 20.0% |
| !!! | TATAGTGAAATAAGCTTTTA+AGG | - | chr7.4:84872797-84872816 | None:intergenic | 20.0% |
| ! | AAAACGAAAACAAAAAACAG+AGG | - | chr7.4:84874142-84874161 | None:intergenic | 25.0% |
| ! | AAAAGTGACTATTATAGACA+TGG | + | chr7.4:84874259-84874278 | MS.gene91601:CDS | 25.0% |
| ! | AACACAATACATTTCAACTT+AGG | - | chr7.4:84872256-84872275 | None:intergenic | 25.0% |
| ! | AATAATATGCATAAATAGGC+CGG | + | chr7.4:84872916-84872935 | MS.gene91601:intron | 25.0% |
| ! | ACTAAATTTGAAAGGGAAAT+TGG | - | chr7.4:84871776-84871795 | None:intergenic | 25.0% |
| ! | CTTTGTAAAAATATTGGCAT+TGG | + | chr7.4:84873333-84873352 | MS.gene91601:intron | 25.0% |
| ! | CTTTGTAAAAATATTGGCAT+TGG | - | chr7.4:84873352-84873333 | None:intergenic | 25.0% |
| ! | GTAAAAAAGTGATGAAGTTA+TGG | - | chr7.4:84874001-84874020 | None:intergenic | 25.0% |
| ! | TACATCATTTAATGATGCAA+TGG | + | chr7.4:84872105-84872124 | MS.gene91601:CDS | 25.0% |
| ! | TGAAATGTATTGTGTTTGAT+AGG | + | chr7.4:84872260-84872279 | MS.gene91601:CDS | 25.0% |
| ! | TTAAAGCCAATTTCATCATA+AGG | + | chr7.4:84872752-84872771 | MS.gene91601:intron | 25.0% |
| !! | AACTTTTTAAATAGGCTTTG+AGG | - | chr7.4:84872823-84872842 | None:intergenic | 25.0% |
| !! | AATAATTTGACTTATGTTGG+TGG | + | chr7.4:84872313-84872332 | MS.gene91601:CDS | 25.0% |
| !! | AGCAATAATTTGACTTATGT+TGG | + | chr7.4:84872310-84872329 | MS.gene91601:CDS | 25.0% |
| !! | ATAATTTGACTTATGTTGGT+GGG | + | chr7.4:84872314-84872333 | MS.gene91601:CDS | 25.0% |
| !! | CTTTGGAAAAATATTGGTAT+TGG | + | chr7.4:84873423-84873442 | MS.gene91601:intron | 25.0% |
| !! | TTATCTTTTGTCAATAATGC+AGG | - | chr7.4:84873847-84873866 | None:intergenic | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+GGG | + | chr7.4:84873510-84873529 | MS.gene91601:intron | 25.0% |
| !!! | CAATATTTTTACAAAGTGCA+GGG | - | chr7.4:84873529-84873510 | None:intergenic | 25.0% |
| !!! | CAATATTTTTTCAAAGTGCA+GGG | + | chr7.4:84873479-84873498 | MS.gene91601:intron | 25.0% |
| !!! | CACTTTTTTTTGTTTGACAT+TGG | - | chr7.4:84873597-84873616 | None:intergenic | 25.0% |
| !!! | TGAAAATTTCACTTGGTTTT+CGG | - | chr7.4:84871646-84871665 | None:intergenic | 25.0% |
| !!! | TTATGATGAAATTGGCTTTA+AGG | - | chr7.4:84872753-84872772 | None:intergenic | 25.0% |
| !!! | TTTTTTTTATAGCCTAAGTC+TGG | + | chr7.4:84872957-84872976 | MS.gene91601:intron | 25.0% |
| AAAGAAGCTGTTACAAATGA+TGG | + | chr7.4:84874227-84874246 | MS.gene91601:CDS | 30.0% | |
| AAATGGAAAAGAGAGAAATG+AGG | + | chr7.4:84874355-84874374 | MS.gene91601:CDS | 30.0% | |
| AAGAAGCTGTTACAAATGAT+GGG | + | chr7.4:84874228-84874247 | MS.gene91601:CDS | 30.0% | |
| AAGGAGATATCTTATAGTGT+TGG | - | chr7.4:84874415-84874434 | None:intergenic | 30.0% | |
| AATAGGTCGACCAAAAAAAT+AGG | - | chr7.4:84872632-84872651 | None:intergenic | 30.0% | |
| AGATTCCATGTCTCTTAAAT+GGG | + | chr7.4:84871706-84871725 | MS.gene91601:CDS | 30.0% | |
| CAAAAAAATAGGCCTATGAA+AGG | - | chr7.4:84872621-84872640 | None:intergenic | 30.0% | |
| CCAAATATTATTCACAACCA+TGG | + | chr7.4:84871746-84871765 | MS.gene91601:CDS | 30.0% | |
| CCATGGTTGTGAATAATATT+TGG | - | chr7.4:84871749-84871768 | None:intergenic | 30.0% | |
| CCTGCACTTTGTAAAAATAT+TGG | + | chr7.4:84873327-84873346 | MS.gene91601:intron | 30.0% | |
| CCTGCACTTTGTAAAAATAT+TGG | - | chr7.4:84873346-84873327 | None:intergenic | 30.0% | |
| GACACACACTCATTAAATAT+AGG | - | chr7.4:84873674-84873693 | None:intergenic | 30.0% | |
| GTTATATTTACTCATCGACA+GGG | + | chr7.4:84872511-84872530 | MS.gene91601:intron | 30.0% | |
| TACATTTCTTCAGTATCCTT+AGG | - | chr7.4:84874208-84874227 | None:intergenic | 30.0% | |
| TACTCAAATTAAGCTCCTTA+TGG | + | chr7.4:84874313-84874332 | MS.gene91601:CDS | 30.0% | |
| TAGATTCCATGTCTCTTAAA+TGG | + | chr7.4:84871705-84871724 | MS.gene91601:CDS | 30.0% | |
| TATAAGATATCTCCTTTGAC+TGG | + | chr7.4:84874419-84874438 | MS.gene91601:CDS | 30.0% | |
| TATGTAGTAGGCATGTAAAT+AGG | - | chr7.4:84872679-84872698 | None:intergenic | 30.0% | |
| TCCATCATACATAAATAGAG+AGG | + | chr7.4:84873799-84873818 | MS.gene91601:intron | 30.0% | |
| TCCTCTCTATTTATGTATGA+TGG | - | chr7.4:84873803-84873822 | None:intergenic | 30.0% | |
| TCTACATAATTGGACTGATA+AGG | + | chr7.4:84874178-84874197 | MS.gene91601:CDS | 30.0% | |
| TTGCAAAAAATTTGTAGGTC+AGG | - | chr7.4:84872579-84872598 | None:intergenic | 30.0% | |
| TTGGTATATGATATGTGTCT+GGG | + | chr7.4:84872469-84872488 | MS.gene91601:intron | 30.0% | |
| TTTGGTATATGATATGTGTC+TGG | + | chr7.4:84872468-84872487 | MS.gene91601:intron | 30.0% | |
| ! | ATGCCAAACAAAAAAAGTAC+AGG | - | chr7.4:84873361-84873380 | None:intergenic | 30.0% |
| ! | CAAAATCTGTTAAAAGTGCA+GGG | + | chr7.4:84873630-84873649 | MS.gene91601:intron | 30.0% |
| ! | CAATATTTTTCCAAAGTGCA+GGG | - | chr7.4:84873419-84873438 | None:intergenic | 30.0% |
| ! | CCTGCACTTTGAAAAAATAT+TGG | - | chr7.4:84873481-84873500 | None:intergenic | 30.0% |
| ! | GATTGTGATTTTGTGTTTGA+TGG | + | chr7.4:84872163-84872182 | MS.gene91601:CDS | 30.0% |
| ! | GTCAAACAAAAAAAAGTGCA+GGG | + | chr7.4:84873599-84873618 | MS.gene91601:intron | 30.0% |
| ! | TAATTTGACTTATGTTGGTG+GGG | + | chr7.4:84872315-84872334 | MS.gene91601:CDS | 30.0% |
| ! | TGCCAAACAAAAAAAGTACA+GGG | - | chr7.4:84873360-84873379 | None:intergenic | 30.0% |
| ! | TGTCAAACAAAAAAAAGTGC+AGG | + | chr7.4:84873598-84873617 | MS.gene91601:intron | 30.0% |
| !! | CCAATATTTTTACAAAGTGC+AGG | + | chr7.4:84873509-84873528 | MS.gene91601:intron | 30.0% |
| !! | CCAATATTTTTACAAAGTGC+AGG | - | chr7.4:84873528-84873509 | None:intergenic | 30.0% |
| !! | CTTTTAACAGATTTTGGCAT+TGG | - | chr7.4:84873626-84873645 | None:intergenic | 30.0% |
| !! | TGATTTTGTGTTTGATGGAT+TGG | + | chr7.4:84872168-84872187 | MS.gene91601:CDS | 30.0% |
| !! | TGTGCTTTGAAAATTTCACT+TGG | - | chr7.4:84871653-84871672 | None:intergenic | 30.0% |
| !!! | CACTTTTTTTTGTTTGGCAT+TGG | + | chr7.4:84873302-84873321 | MS.gene91601:intron | 30.0% |
| !!! | CACTTTTTTTTGTTTGGCAT+TGG | - | chr7.4:84873321-84873302 | None:intergenic | 30.0% |
| !!! | CCAATATTTTTTCAAAGTGC+AGG | + | chr7.4:84873478-84873497 | MS.gene91601:intron | 30.0% |
| !!! | CTTTCATAGGCCTATTTTTT+TGG | + | chr7.4:84872619-84872638 | MS.gene91601:intron | 30.0% |
| !!! | GTACTTTTTTTGTTTGGCAT+TGG | + | chr7.4:84873361-84873380 | MS.gene91601:intron | 30.0% |
| !!! | TACTTTAGGATCTGGTTTTT+GGG | + | chr7.4:84872054-84872073 | MS.gene91601:CDS | 30.0% |
| !!! | TTACTTTAGGATCTGGTTTT+TGG | + | chr7.4:84872053-84872072 | MS.gene91601:CDS | 30.0% |
| AAAAACATACGAAGCCTGAT+AGG | - | chr7.4:84872942-84872961 | None:intergenic | 35.0% | |
| AAGAAACTCTTCATAGAAGC+TGG | + | chr7.4:84874386-84874405 | MS.gene91601:CDS | 35.0% | |
| AAGAGACATGGAATCTATGA+AGG | - | chr7.4:84871702-84871721 | None:intergenic | 35.0% | |
| AAGAGAGAAATGAGGAAGAA+TGG | + | chr7.4:84874363-84874382 | MS.gene91601:CDS | 35.0% | |
| AAGCATTCCCTATAAAGTGT+CGG | - | chr7.4:84872447-84872466 | None:intergenic | 35.0% | |
| AAGCCATGTTTACATCCATA+AGG | - | chr7.4:84874331-84874350 | None:intergenic | 35.0% | |
| AAGGCTTGTCTATTGCTATA+AGG | + | chr7.4:84872771-84872790 | MS.gene91601:intron | 35.0% | |
| AGAGACAAAAATCCAGTCAA+AGG | - | chr7.4:84874434-84874453 | None:intergenic | 35.0% | |
| CAAGTTGTAGAGAACTTATC+TGG | + | chr7.4:84872286-84872305 | MS.gene91601:CDS | 35.0% | |
| CAGGCTTGCAAAAAATTTGT+AGG | - | chr7.4:84872584-84872603 | None:intergenic | 35.0% | |
| CTTTATAGGGAATGCTTGTT+TGG | + | chr7.4:84872450-84872469 | MS.gene91601:intron | 35.0% | |
| GATAAGTTCTCTACAACTTG+TGG | - | chr7.4:84872286-84872305 | None:intergenic | 35.0% | |
| GGTTATATTTACTCATCGAC+AGG | + | chr7.4:84872510-84872529 | MS.gene91601:intron | 35.0% | |
| TAAGTAAATAGGCCAGACTT+AGG | - | chr7.4:84872972-84872991 | None:intergenic | 35.0% | |
| TCAATAATGCAGGTCTATGA+TGG | - | chr7.4:84873837-84873856 | None:intergenic | 35.0% | |
| TGTTCTTGATCCAACTCTTT+CGG | + | chr7.4:84871973-84871992 | MS.gene91601:CDS | 35.0% | |
| TTGGAATCAATTGTGGATGT+TGG | + | chr7.4:84872187-84872206 | MS.gene91601:CDS | 35.0% | |
| ! | CAAAATCTGTTGAAAGTGCA+GGG | - | chr7.4:84873269-84873288 | None:intergenic | 35.0% |
| ! | CCAAAATCTGTTAAAAGTGC+AGG | + | chr7.4:84873629-84873648 | MS.gene91601:intron | 35.0% |
| ! | CCAATATTTTTCCAAAGTGC+AGG | - | chr7.4:84873420-84873439 | None:intergenic | 35.0% |
| ! | CCTGCACTTTGGAAAAATAT+TGG | + | chr7.4:84873417-84873436 | MS.gene91601:intron | 35.0% |
| ! | CCTGCACTTTTAACAGATTT+TGG | - | chr7.4:84873632-84873651 | None:intergenic | 35.0% |
| ! | GACAAGCCTTATGATGAAAT+TGG | - | chr7.4:84872761-84872780 | None:intergenic | 35.0% |
| ! | GCCAAACAAAAAAAAGTGCA+GGG | + | chr7.4:84873539-84873558 | MS.gene91601:intron | 35.0% |
| ! | GCCAAACAAAAAAAAGTGCA+GGG | - | chr7.4:84873558-84873539 | None:intergenic | 35.0% |
| ! | GCTATACCAGGCTTTTAAAT+AGG | - | chr7.4:84872649-84872668 | None:intergenic | 35.0% |
| ! | GCTGAAGAAATGGATTTATG+AGG | + | chr7.4:84872009-84872028 | MS.gene91601:CDS | 35.0% |
| ! | GTAAACATGGCTTGTCTAAA+TGG | + | chr7.4:84874338-84874357 | MS.gene91601:CDS | 35.0% |
| ! | GTTACAAATGATGGGAAAAG+AGG | + | chr7.4:84874236-84874255 | MS.gene91601:CDS | 35.0% |
| ! | TGATCTTTGTTTAGCACCAA+TGG | + | chr7.4:84871943-84871962 | MS.gene91601:CDS | 35.0% |
| ! | TGCCAAACAAAAAAAAGTGC+AGG | + | chr7.4:84873538-84873557 | MS.gene91601:intron | 35.0% |
| ! | TGCCAAACAAAAAAAAGTGC+AGG | - | chr7.4:84873557-84873538 | None:intergenic | 35.0% |
| !! | ACACTCTTTGGTGTTACTTT+AGG | + | chr7.4:84872040-84872059 | MS.gene91601:CDS | 35.0% |
| !! | CTTTCAACAGATTTTGGCAT+TGG | + | chr7.4:84873273-84873292 | MS.gene91601:intron | 35.0% |
| !! | TGATGGATTGGAATCAATTG+TGG | + | chr7.4:84872180-84872199 | MS.gene91601:CDS | 35.0% |
| !! | TTTGGTGTTACTTTAGGATC+TGG | + | chr7.4:84872046-84872065 | MS.gene91601:CDS | 35.0% |
| !!! | ATTTTTTGCAAGCCTGAGTT+TGG | + | chr7.4:84872588-84872607 | MS.gene91601:intron | 35.0% |
| !!! | GTCCCTGTACTTTTTTTGTT+TGG | + | chr7.4:84873355-84873374 | MS.gene91601:intron | 35.0% |
| !!! | TCCCTGCACTTTTTTTTGTT+TGG | + | chr7.4:84873296-84873315 | MS.gene91601:intron | 35.0% |
| !!! | TCCCTGCACTTTTTTTTGTT+TGG | - | chr7.4:84873315-84873296 | None:intergenic | 35.0% |
| AAAATCATAAGCCTAACCGC+AGG | + | chr7.4:84873005-84873024 | MS.gene91601:intron | 40.0% | |
| AACAGCCCATTTAAGAGACA+TGG | - | chr7.4:84871714-84871733 | None:intergenic | 40.0% | |
| ACGTACATATGCACGAGAAA+TGG | - | chr7.4:84873780-84873799 | None:intergenic | 40.0% | |
| AGCAAAACTGCATCAGCATT+AGG | - | chr7.4:84872358-84872377 | None:intergenic | 40.0% | |
| AGGCATGTAAATAGGCTTCT+AGG | - | chr7.4:84872671-84872690 | None:intergenic | 40.0% | |
| AGTAGGATTGGGAATAGATC+AGG | - | chr7.4:84873092-84873111 | None:intergenic | 40.0% | |
| ATTTACTCATCGACAGGGAT+GGG | + | chr7.4:84872516-84872535 | MS.gene91601:intron | 40.0% | |
| CAAGTTCCATCGTCGAAAAT+AGG | + | chr7.4:84871806-84871825 | MS.gene91601:CDS | 40.0% | |
| CGTATCATGAGCTGAAGAAA+TGG | + | chr7.4:84871999-84872018 | MS.gene91601:CDS | 40.0% | |
| GAATCAATTGTGGATGTTGG+TGG | + | chr7.4:84872190-84872209 | MS.gene91601:CDS | 40.0% | |
| GAGGAAGATCTTACACTCTT+TGG | + | chr7.4:84872028-84872047 | MS.gene91601:CDS | 40.0% | |
| GCTCCTTATGGATGTAAACA+TGG | + | chr7.4:84874325-84874344 | MS.gene91601:CDS | 40.0% | |
| GTAGGATTGGGAATAGATCA+GGG | - | chr7.4:84873091-84873110 | None:intergenic | 40.0% | |
| GTTCTTGATCCAACTCTTTC+GGG | + | chr7.4:84871974-84871993 | MS.gene91601:CDS | 40.0% | |
| TATTTACTCATCGACAGGGA+TGG | + | chr7.4:84872515-84872534 | MS.gene91601:intron | 40.0% | |
| TCAAGAACACACTCAACCAT+TGG | - | chr7.4:84871962-84871981 | None:intergenic | 40.0% | |
| ! | ACGTTACCTATTTTCGACGA+TGG | - | chr7.4:84871815-84871834 | None:intergenic | 40.0% |
| ! | CCAAAATCTGTTGAAAGTGC+AGG | - | chr7.4:84873270-84873289 | None:intergenic | 40.0% |
| ! | CCTGCACTTTCAACAGATTT+TGG | + | chr7.4:84873267-84873286 | MS.gene91601:intron | 40.0% |
| ! | TGCTGATGCAGTTTTGCTTA+AGG | + | chr7.4:84872360-84872379 | MS.gene91601:CDS | 40.0% |
| !! | AAAGGGAAATTGGTTTGCCA+TGG | - | chr7.4:84871766-84871785 | None:intergenic | 40.0% |
| AAAATTTGTAGGTCAGGCCC+AGG | - | chr7.4:84872573-84872592 | None:intergenic | 45.0% | |
| ATAGGCCTATGAAAGGCCAT+AGG | - | chr7.4:84872614-84872633 | None:intergenic | 45.0% | |
| ATAGGCTTCTAGGCTATACC+AGG | - | chr7.4:84872661-84872680 | None:intergenic | 45.0% | |
| ATTCCCAATCCTACTCATCG+AGG | + | chr7.4:84873097-84873116 | MS.gene91601:intron | 45.0% | |
| CAACCTCGATGAGTAGGATT+GGG | - | chr7.4:84873103-84873122 | None:intergenic | 45.0% | |
| CCACGTGGCATGAAATGATT+GGG | - | chr7.4:84873450-84873469 | None:intergenic | 45.0% | |
| CGTCGAAAATAGGTAACGTG+CGG | + | chr7.4:84871816-84871835 | MS.gene91601:CDS | 45.0% | |
| GCTTCAGAGCTTCTTGTTAG+AGG | + | chr7.4:84871917-84871936 | MS.gene91601:CDS | 45.0% | |
| GGACTGATAAGGATTGCCTA+AGG | + | chr7.4:84874189-84874208 | MS.gene91601:CDS | 45.0% | |
| GGTCGACCTATTTAAAAGCC+TGG | + | chr7.4:84872640-84872659 | MS.gene91601:intron | 45.0% | |
| TCAACCTCGATGAGTAGGAT+TGG | - | chr7.4:84873104-84873123 | None:intergenic | 45.0% | |
| TGATACGAACCCGAAAGAGT+TGG | - | chr7.4:84871986-84872005 | None:intergenic | 45.0% | |
| TTTGGCCTATGGCCTTTCAT+AGG | + | chr7.4:84872606-84872625 | MS.gene91601:intron | 45.0% | |
| ! | TCAATTGTGGATGTTGGTGG+TGG | + | chr7.4:84872193-84872212 | MS.gene91601:CDS | 45.0% |
| !! | AGGTAGCACCGACACTTTAT+AGG | + | chr7.4:84872436-84872455 | MS.gene91601:intron | 45.0% |
| !! | ATAAAGTGTCGGTGCTACCT+AGG | - | chr7.4:84872436-84872455 | None:intergenic | 45.0% |
| !! | ATATTGGTATTGGTGCCACG+TGG | - | chr7.4:84873465-84873484 | None:intergenic | 45.0% |
| !! | GGTAGCACCGACACTTTATA+GGG | + | chr7.4:84872437-84872456 | MS.gene91601:intron | 45.0% |
| !! | TCATCGAGGTTGACTTGCTT+AGG | + | chr7.4:84873111-84873130 | MS.gene91601:intron | 45.0% |
| AAAGGCCATAGGCCAAACTC+AGG | - | chr7.4:84872603-84872622 | None:intergenic | 50.0% | |
| ACATACGAAGCCTGATAGGC+CGG | - | chr7.4:84872938-84872957 | None:intergenic | 50.0% | |
| AGACCAGACTTTGATAGGCC+TGG | + | chr7.4:84872552-84872571 | MS.gene91601:intron | 50.0% | |
| AGGCCAGACCAGACTTTGAT+AGG | + | chr7.4:84872547-84872566 | MS.gene91601:intron | 50.0% | |
| AGGCCTATCAAAGTCTGGTC+TGG | - | chr7.4:84872553-84872572 | None:intergenic | 50.0% | |
| CATAAATAGGCCGGCCTATC+AGG | + | chr7.4:84872925-84872944 | MS.gene91601:intron | 50.0% | |
| CCCAATCATTTCATGCCACG+TGG | + | chr7.4:84873447-84873466 | MS.gene91601:intron | 50.0% | |
| GACAGGGATGGGAATATACC+AGG | + | chr7.4:84872527-84872546 | MS.gene91601:intron | 50.0% | |
| GACCAGACTTTGATAGGCCT+GGG | + | chr7.4:84872553-84872572 | MS.gene91601:intron | 50.0% | |
| GCAAGTCAACCTCGATGAGT+AGG | - | chr7.4:84873109-84873128 | None:intergenic | 50.0% | |
| GCCACGTGGCATGAAATGAT+TGG | - | chr7.4:84873451-84873470 | None:intergenic | 50.0% | |
| TATCAAAGTCTGGTCTGGCC+TGG | - | chr7.4:84872548-84872567 | None:intergenic | 50.0% | |
| !! | GGGTTCAACATCGACTCATG+TGG | + | chr7.4:84872489-84872508 | MS.gene91601:intron | 50.0% |
| !! | TGGTATTGGTCCCTGCACTT+TGG | + | chr7.4:84873406-84873425 | MS.gene91601:intron | 50.0% |
| AAGGCAGGCTTAAACAGGCC+AGG | + | chr7.4:84873045-84873064 | MS.gene91601:intron | 55.0% | |
| ACCTACAAGAGCCTACGACC+TGG | - | chr7.4:84873066-84873085 | None:intergenic | 55.0% | |
| AGGCCAAGGCAGGCTTAAAC+AGG | + | chr7.4:84873040-84873059 | MS.gene91601:intron | 55.0% | |
| ATGCGTTACCTCGCGCACAA+CGG | + | chr7.4:84871845-84871864 | MS.gene91601:CDS | 55.0% | |
| GCAAGCCTGAGTTTGGCCTA+TGG | + | chr7.4:84872595-84872614 | MS.gene91601:intron | 55.0% | |
| GCCTAACCGCAGGCTTAAAC+AGG | + | chr7.4:84873015-84873034 | MS.gene91601:intron | 55.0% | |
| GCCTGTTTAAGCCTGCGGTT+AGG | - | chr7.4:84873019-84873038 | None:intergenic | 55.0% | |
| GCTTAAACAGGCCAGGTCGT+AGG | + | chr7.4:84873052-84873071 | MS.gene91601:intron | 55.0% | |
| TGGCCTGTTTAAGCCTGCCT+TGG | - | chr7.4:84873046-84873065 | None:intergenic | 55.0% | |
| TGTTTAAGCCTGCCTTGGCC+TGG | - | chr7.4:84873041-84873060 | None:intergenic | 55.0% | |
| !! | GTGGATGTTGGTGGTGGAAC+TGG | + | chr7.4:84872199-84872218 | MS.gene91601:CDS | 55.0% |
| ACCGCAGGCTTAAACAGGCC+AGG | + | chr7.4:84873020-84873039 | MS.gene91601:intron | 60.0% | |
| CGAAGAATCCGTTGTGCGCG+AGG | - | chr7.4:84871856-84871875 | None:intergenic | 60.0% | |
| GCCAGGTCGTAGGCTCTTGT+AGG | + | chr7.4:84873062-84873081 | MS.gene91601:intron | 60.0% | |
| GCCTGGCCTGTTTAAGCCTG+CGG | - | chr7.4:84873024-84873043 | None:intergenic | 60.0% | |
| GGCCCAGGCCTATCAAAGTC+TGG | - | chr7.4:84872558-84872577 | None:intergenic | 60.0% | |
| GGCTTAAACAGGCCAGGCCA+AGG | + | chr7.4:84873026-84873045 | MS.gene91601:intron | 60.0% | |
| TAAACAGGCCAGGCCAAGGC+AGG | + | chr7.4:84873030-84873049 | MS.gene91601:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 84871623 | 84874472 | 84871623 | ID=MS.gene91601 |
| chr7.4 | mRNA | 84871623 | 84874472 | 84871623 | ID=MS.gene91601.t1;Parent=MS.gene91601 |
| chr7.4 | exon | 84871623 | 84872381 | 84871623 | ID=MS.gene91601.t1.exon1;Parent=MS.gene91601.t1 |
| chr7.4 | CDS | 84871623 | 84872381 | 84871623 | ID=cds.MS.gene91601.t1;Parent=MS.gene91601.t1 |
| chr7.4 | exon | 84874173 | 84874472 | 84874173 | ID=MS.gene91601.t1.exon2;Parent=MS.gene91601.t1 |
| chr7.4 | CDS | 84874173 | 84874472 | 84874173 | ID=cds.MS.gene91601.t1;Parent=MS.gene91601.t1 |
| Gene Sequence |
| Protein sequence |
