Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91918.t1 | XP_003613633.1 | 100 | 332 | 0 | 0 | 1 | 332 | 1 | 332 | 2.10E-192 | 681.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91918.t1 | Q9M9S6 | 88.5 | 331 | 38 | 0 | 1 | 331 | 1 | 331 | 1.8e-176 | 619.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91918.t1 | Q2HTW1 | 100.0 | 332 | 0 | 0 | 1 | 332 | 1 | 332 | 1.5e-192 | 681.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06113 | MS.gene91918 | 0.851953 | 6.34E-61 | -1.69E-46 |
| MS.gene06117 | MS.gene91918 | 0.808419 | 3.13E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91918.t1 | MTR_5g038900 | 100.000 | 332 | 0 | 0 | 1 | 332 | 1 | 332 | 0.0 | 679 |
| MS.gene91918.t1 | MTR_2g096300 | 32.550 | 298 | 195 | 4 | 16 | 311 | 28 | 321 | 1.19e-35 | 132 |
| MS.gene91918.t1 | MTR_4g063040 | 30.794 | 315 | 196 | 5 | 14 | 318 | 27 | 329 | 1.38e-32 | 124 |
| MS.gene91918.t1 | MTR_7g076310 | 24.756 | 307 | 200 | 9 | 17 | 315 | 27 | 310 | 1.90e-15 | 76.6 |
| MS.gene91918.t1 | MTR_7g076310 | 26.250 | 240 | 161 | 6 | 81 | 315 | 58 | 286 | 3.72e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91918.t1 | AT1G14360 | 88.520 | 331 | 38 | 0 | 1 | 331 | 1 | 331 | 0.0 | 602 |
| MS.gene91918.t1 | AT2G02810 | 83.434 | 332 | 55 | 0 | 1 | 332 | 1 | 332 | 0.0 | 568 |
| MS.gene91918.t1 | AT3G46180 | 30.769 | 325 | 212 | 4 | 15 | 331 | 21 | 340 | 1.53e-31 | 121 |
| MS.gene91918.t1 | AT5G59740 | 31.429 | 315 | 208 | 3 | 15 | 326 | 20 | 329 | 4.24e-30 | 117 |
| MS.gene91918.t1 | AT3G46180 | 32.472 | 271 | 173 | 4 | 15 | 281 | 21 | 285 | 1.35e-27 | 109 |
| MS.gene91918.t1 | AT1G12600 | 25.828 | 302 | 195 | 9 | 17 | 311 | 29 | 308 | 4.08e-17 | 81.6 |
| MS.gene91918.t1 | AT4G23010 | 28.922 | 204 | 132 | 5 | 102 | 302 | 102 | 295 | 3.51e-15 | 75.9 |
| MS.gene91918.t1 | AT4G23010 | 27.727 | 220 | 131 | 7 | 102 | 302 | 102 | 312 | 2.03e-13 | 70.9 |
Find 89 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGTTGGGCATGAATTTA+TGG | 0.164255 | 5.3:+27250076 | MS.gene91918:CDS |
| GTGCTCCTTGGTGGTCTTAT+TGG | 0.176225 | 5.3:+27246943 | MS.gene91918:CDS |
| CCAAATGCTCCTCTTGGATA+TGG | 0.204631 | 5.3:+27249224 | MS.gene91918:CDS |
| AGGAAGGTACAAAGGTATTC+TGG | 0.244279 | 5.3:-27249028 | None:intergenic |
| CTTTGTACCTTCCTTGTTGC+TGG | 0.252082 | 5.3:+27249037 | MS.gene91918:CDS |
| AGAACGTGGTTTGTTTAATT+TGG | 0.267247 | 5.3:+27246256 | MS.gene91918:CDS |
| AAAATATCCCATGCTGCTTC+TGG | 0.276882 | 5.3:-27250180 | None:intergenic |
| CCTTCTGCGTCGCCGGAATC+TGG | 0.296006 | 5.3:+27246037 | MS.gene91918:CDS |
| TATGTTGGGCATGAATTTAT+GGG | 0.345961 | 5.3:+27250077 | MS.gene91918:CDS |
| ATCTGGGGTGGTGGAAATAC+TGG | 0.354736 | 5.3:+27246918 | MS.gene91918:CDS |
| AATATACGCCGACCAGATTC+CGG | 0.360790 | 5.3:-27246049 | None:intergenic |
| TTCTTGACTATAAGCCGGTT+TGG | 0.375249 | 5.3:+27250243 | MS.gene91918:CDS |
| CATGTAAATCATATTGTATA+TGG | 0.377775 | 5.3:-27250103 | None:intergenic |
| TTCAGGTCAACGAAGCGATT+TGG | 0.380895 | 5.3:+27246186 | MS.gene91918:intron |
| TATTTACCAAGGCATTCTTC+AGG | 0.383876 | 5.3:+27246068 | MS.gene91918:CDS |
| GCTGGAATTACTAATACTAT+TGG | 0.396641 | 5.3:+27246969 | MS.gene91918:CDS |
| TCCCCTTTCAACAAAGCAAT+GGG | 0.410772 | 5.3:+27250341 | MS.gene91918:CDS |
| TTCATCATTTGCACTTCTAA+AGG | 0.417139 | 5.3:+27249066 | MS.gene91918:CDS |
| TGTGTTACTATGGTATTCTC+TGG | 0.427170 | 5.3:+27250366 | MS.gene91918:CDS |
| TGGTGGTCTTATTGGAGTGC+TGG | 0.428422 | 5.3:+27246951 | MS.gene91918:CDS |
| GAAATACTGGTGGTGCTCCT+TGG | 0.431303 | 5.3:+27246931 | MS.gene91918:CDS |
| CTGATGGGTTCACTCGTATA+CGG | 0.433827 | 5.3:+27248989 | MS.gene91918:CDS |
| TAATACTATTGGTCCTGCTA+TGG | 0.436414 | 5.3:+27246980 | MS.gene91918:CDS |
| CCATATCCAAGAGGAGCATT+TGG | 0.439599 | 5.3:-27249224 | None:intergenic |
| GGAAGGTACAAAGGTATTCT+GGG | 0.451346 | 5.3:-27249027 | None:intergenic |
| TATGTGCAGTGATAAAGATC+TGG | 0.457632 | 5.3:+27246901 | MS.gene91918:intron |
| GTTCTCGCCTTCTGCGTCGC+CGG | 0.457661 | 5.3:+27246030 | MS.gene91918:CDS |
| GCACATCCAAATGCTCCTCT+TGG | 0.463943 | 5.3:+27249218 | MS.gene91918:CDS |
| CAAATGCTCCTCTTGGATAT+GGG | 0.465849 | 5.3:+27249225 | MS.gene91918:CDS |
| AGTGCTTGGGGTATTATGTT+GGG | 0.470779 | 5.3:+27250063 | MS.gene91918:CDS |
| TCTGCCACTTGAGGTAGATC+TGG | 0.486763 | 5.3:-27250398 | None:intergenic |
| GCCAAGTGGTAGTGGATATG+AGG | 0.489109 | 5.3:+27250134 | MS.gene91918:CDS |
| AAGTGCTTGGGGTATTATGT+TGG | 0.492767 | 5.3:+27250062 | MS.gene91918:CDS |
| ATACTGGTGGTGCTCCTTGG+TGG | 0.493880 | 5.3:+27246934 | MS.gene91918:CDS |
| GTATATTAGTTACCCTGCTC+AGG | 0.494178 | 5.3:+27247019 | MS.gene91918:CDS |
| CTTCAATGCAGTTATGCTGA+TGG | 0.498290 | 5.3:+27248973 | MS.gene91918:intron |
| AAAGCTTCAATTCCCATAGC+AGG | 0.502581 | 5.3:-27246993 | None:intergenic |
| TGTTAGCTAAAGAGCCAAAC+CGG | 0.504636 | 5.3:-27250257 | None:intergenic |
| TTATATTCTTGACTATAAGC+CGG | 0.511449 | 5.3:+27250238 | MS.gene91918:CDS |
| TTTGAACTTGGCGCAGAACG+TGG | 0.519954 | 5.3:+27246242 | MS.gene91918:CDS |
| CTTGCTGATAGTCTTTGAGC+TGG | 0.522206 | 5.3:-27249192 | None:intergenic |
| AATACTATTGGTCCTGCTAT+GGG | 0.523343 | 5.3:+27246981 | MS.gene91918:CDS |
| TTCAATGCAGTTATGCTGAT+GGG | 0.523502 | 5.3:+27248974 | MS.gene91918:intron |
| CCCCATTGCTTTGTTGAAAG+GGG | 0.523889 | 5.3:-27250342 | None:intergenic |
| ATATGATTTACATGTTTGCA+TGG | 0.526096 | 5.3:+27250112 | MS.gene91918:CDS |
| GTGATAAAGATCTGGGGTGG+TGG | 0.529688 | 5.3:+27246909 | MS.gene91918:intron |
| GTATTGCTGCTGTGGTGCTG+TGG | 0.533005 | 5.3:+27250206 | MS.gene91918:CDS |
| TTTGCATGGCCAAGTGGTAG+TGG | 0.534136 | 5.3:+27250126 | MS.gene91918:CDS |
| ATCCCCTTTCAACAAAGCAA+TGG | 0.537351 | 5.3:+27250340 | MS.gene91918:CDS |
| CGACGCAGAAGGCGAGAACA+AGG | 0.544545 | 5.3:-27246026 | None:intergenic |
| CCAGATTCCGGCGACGCAGA+AGG | 0.547977 | 5.3:-27246037 | None:intergenic |
| CTCAAAGACTATCAGCAAGC+TGG | 0.553037 | 5.3:+27249196 | MS.gene91918:CDS |
| TATTGCTGCTGTGGTGCTGT+GGG | 0.554263 | 5.3:+27250207 | MS.gene91918:CDS |
| TTAATGGAAGCTCACGGCGG+AGG | 0.556627 | 5.3:+27245991 | None:intergenic |
| ATGTGCAGTGATAAAGATCT+GGG | 0.558786 | 5.3:+27246902 | MS.gene91918:intron |
| ACAACATCCAGAAGCAGCAT+GGG | 0.564204 | 5.3:+27250173 | MS.gene91918:CDS |
| TGTACCTTCCTTGTTGCTGG+AGG | 0.565023 | 5.3:+27249040 | MS.gene91918:CDS |
| AACAACATCCAGAAGCAGCA+TGG | 0.568553 | 5.3:+27250172 | MS.gene91918:CDS |
| CCCTTTCAACAAAGCAATGG+GGG | 0.570305 | 5.3:+27250343 | MS.gene91918:CDS |
| CCCAGGATTCCTTAAAAGCA+AGG | 0.572578 | 5.3:+27249291 | MS.gene91918:CDS |
| GTGTTTCCTGAAGAATGCCT+TGG | 0.578829 | 5.3:-27246074 | None:intergenic |
| TGGATTTACTAATGCAACCC+AGG | 0.581751 | 5.3:+27249274 | MS.gene91918:CDS |
| TGGTATCTTCACTATTGAGT+GGG | 0.586928 | 5.3:+27250316 | MS.gene91918:CDS |
| ATGTTGGGCATGAATTTATG+GGG | 0.591007 | 5.3:+27250078 | MS.gene91918:CDS |
| AGAAGGCGAGAACAAGGATG+CGG | 0.591493 | 5.3:-27246020 | None:intergenic |
| TGGGGTGGTGGAAATACTGG+TGG | 0.597101 | 5.3:+27246921 | MS.gene91918:CDS |
| CATACCAGATCTACCTCAAG+TGG | 0.602281 | 5.3:+27250394 | MS.gene91918:CDS |
| GCCTCATATCCACTACCACT+TGG | 0.602799 | 5.3:-27250135 | None:intergenic |
| TCTGCAACTTCTGCCACTTG+AGG | 0.603062 | 5.3:-27250407 | None:intergenic |
| AAATTTGCGAGTGGTAGTGA+TGG | 0.603630 | 5.3:-27250283 | None:intergenic |
| TAGTAAATCCATCAAAAGCA+AGG | 0.603971 | 5.3:-27249262 | None:intergenic |
| AGGCGAGAACAAGGATGCGG+CGG | 0.605230 | 5.3:-27246017 | None:intergenic |
| CTGCGTCGCCGGAATCTGGT+CGG | 0.615572 | 5.3:+27246041 | MS.gene91918:CDS |
| GTGGTATCTTCACTATTGAG+TGG | 0.618540 | 5.3:+27250315 | MS.gene91918:CDS |
| GGTACAAAGGTATTCTGGGA+TGG | 0.626831 | 5.3:-27249023 | None:intergenic |
| CAGCAACAAGGAAGGTACAA+AGG | 0.630883 | 5.3:-27249036 | None:intergenic |
| ATGAAACACCTCCAGCAACA+AGG | 0.652025 | 5.3:-27249048 | None:intergenic |
| AACACCTCCAGCAACAAGGA+AGG | 0.653676 | 5.3:-27249044 | None:intergenic |
| TACATGTTTGCATGGCCAAG+TGG | 0.656810 | 5.3:+27250120 | MS.gene91918:CDS |
| GATGCTTACAAATTTGCGAG+TGG | 0.674536 | 5.3:-27250292 | None:intergenic |
| CCCCTTTCAACAAAGCAATG+GGG | 0.674603 | 5.3:+27250342 | MS.gene91918:CDS |
| TGGTCGGCGTATATTTACCA+AGG | 0.679374 | 5.3:+27246057 | MS.gene91918:CDS |
| AAACATAGCCCATATCCAAG+AGG | 0.688551 | 5.3:-27249233 | None:intergenic |
| CTCGCTTTAATGGAAGCTCA+CGG | 0.709865 | 5.3:+27245985 | None:intergenic |
| TCGCAAATTTGTAAGCATCG+TGG | 0.735594 | 5.3:+27250296 | MS.gene91918:CDS |
| GCTTTAATGGAAGCTCACGG+CGG | 0.743316 | 5.3:+27245988 | None:intergenic |
| GCACTCCAATAAGACCACCA+AGG | 0.754915 | 5.3:-27246948 | None:intergenic |
| GCAGTGATAAAGATCTGGGG+TGG | 0.768977 | 5.3:+27246906 | MS.gene91918:intron |
| TGTGCAGTGATAAAGATCTG+GGG | 0.795047 | 5.3:+27246903 | MS.gene91918:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTTTTTTTTTTT+TGG | + | chr5.3:27246866-27246885 | MS.gene91918:intron | 0.0% |
| !! | AATATAAGTATTAAGATTTG+AGG | + | chr5.3:27247995-27248014 | MS.gene91918:intron | 15.0% |
| !! | GTATAATAATTTGATACAAT+TGG | + | chr5.3:27248391-27248410 | MS.gene91918:intron | 15.0% |
| !!! | CATTAGTTATTTAGTTTTTT+GGG | + | chr5.3:27248791-27248810 | MS.gene91918:intron | 15.0% |
| !!! | TTTTAACTTAAGCATTTATA+AGG | - | chr5.3:27247963-27247982 | None:intergenic | 15.0% |
| !! | AAAACATAAAAAGGAACAAT+TGG | - | chr5.3:27246700-27246719 | None:intergenic | 20.0% |
| !! | AACAATTAATCATGATTAGT+GGG | + | chr5.3:27247649-27247668 | MS.gene91918:intron | 20.0% |
| !! | AAGATAGAGAAAACATAAAA+AGG | - | chr5.3:27246709-27246728 | None:intergenic | 20.0% |
| !! | ATTGAATTGAAAAATTGTTG+TGG | + | chr5.3:27246119-27246138 | MS.gene91918:intron | 20.0% |
| !! | CATAACTTAACATGAAATTA+TGG | - | chr5.3:27249470-27249489 | None:intergenic | 20.0% |
| !! | CATGTAAATCATATTGTATA+TGG | - | chr5.3:27250106-27250125 | None:intergenic | 20.0% |
| !! | CTTTAGCATTTAAACAAAAT+TGG | + | chr5.3:27248597-27248616 | MS.gene91918:intron | 20.0% |
| !! | TAAGACACATAAAAATGATA+TGG | - | chr5.3:27248237-27248256 | None:intergenic | 20.0% |
| !! | TAGATAGTTAATTCAATTCA+CGG | + | chr5.3:27246497-27246516 | MS.gene91918:intron | 20.0% |
| !! | TCATAGTTAATTAATGTGTA+AGG | + | chr5.3:27246837-27246856 | MS.gene91918:intron | 20.0% |
| !! | TGATATATTACATAGAATCA+AGG | + | chr5.3:27247247-27247266 | MS.gene91918:intron | 20.0% |
| !! | TGATTCTATGTAATATATCA+AGG | - | chr5.3:27247247-27247266 | None:intergenic | 20.0% |
| !!! | GCATTAGTTATTTAGTTTTT+TGG | + | chr5.3:27248790-27248809 | MS.gene91918:intron | 20.0% |
| !!! | GTTTAAAAATTTTAGGGTTT+TGG | - | chr5.3:27247787-27247806 | None:intergenic | 20.0% |
| !!! | TATTGAATTCTTTTGTGATT+TGG | + | chr5.3:27246161-27246180 | MS.gene91918:intron | 20.0% |
| !!! | TCTCAATTTTAATAATCCAA+CGG | + | chr5.3:27248566-27248585 | MS.gene91918:intron | 20.0% |
| !!! | TGTTTTAGAGAATTCTATAA+TGG | - | chr5.3:27248158-27248177 | None:intergenic | 20.0% |
| ! | AAAATGTTGAGATTTGAGAA+AGG | - | chr5.3:27249932-27249951 | None:intergenic | 25.0% |
| ! | AAATTCATCATCAGATTATG+TGG | + | chr5.3:27248920-27248939 | MS.gene91918:intron | 25.0% |
| ! | AACTTAAGCATTTATAAGGA+AGG | - | chr5.3:27247959-27247978 | None:intergenic | 25.0% |
| ! | AATTGTATAGTCGTAAACTA+TGG | + | chr5.3:27247059-27247078 | MS.gene91918:intron | 25.0% |
| ! | ACATTCAAACACAAATGAAA+CGG | - | chr5.3:27249907-27249926 | None:intergenic | 25.0% |
| ! | AGAAAATGAAATTCATCTAC+AGG | - | chr5.3:27248549-27248568 | None:intergenic | 25.0% |
| ! | AGTCATTAGAGCTAAAAAAT+TGG | + | chr5.3:27247148-27247167 | MS.gene91918:intron | 25.0% |
| ! | AGTTAATTAATGTGTAAGGT+TGG | + | chr5.3:27246841-27246860 | MS.gene91918:intron | 25.0% |
| ! | ATATGATTTACATGTTTGCA+TGG | + | chr5.3:27250112-27250131 | MS.gene91918:CDS | 25.0% |
| ! | CAACAATTAATCATGATTAG+TGG | + | chr5.3:27247648-27247667 | MS.gene91918:intron | 25.0% |
| ! | GATCAGAAATTATTCAGATT+AGG | - | chr5.3:27249513-27249532 | None:intergenic | 25.0% |
| ! | GTATGGGATTATAATAAAAG+TGG | + | chr5.3:27247081-27247100 | MS.gene91918:intron | 25.0% |
| ! | TACTTGATAGATGAATTGAA+AGG | - | chr5.3:27249575-27249594 | None:intergenic | 25.0% |
| ! | TAGTCGTTAAATGTCTTTAT+TGG | + | chr5.3:27249624-27249643 | MS.gene91918:intron | 25.0% |
| ! | TATATATGTAATCCCAAGTT+TGG | - | chr5.3:27247509-27247528 | None:intergenic | 25.0% |
| ! | TCTTTAAATGGTTTCACTAT+TGG | + | chr5.3:27248039-27248058 | MS.gene91918:intron | 25.0% |
| ! | TTATATTCTTGACTATAAGC+CGG | + | chr5.3:27250238-27250257 | MS.gene91918:CDS | 25.0% |
| !! | ATTTTTAAACCGGATTAACT+AGG | + | chr5.3:27246524-27246543 | MS.gene91918:intron | 25.0% |
| !! | CATTTTTCACATATTATCAG+CGG | - | chr5.3:27246347-27246366 | None:intergenic | 25.0% |
| !! | GTATTAAGATTTGAGGTAAA+AGG | + | chr5.3:27248002-27248021 | MS.gene91918:intron | 25.0% |
| !! | TCATTTTCTCTGATTGTTAT+TGG | + | chr5.3:27246785-27246804 | MS.gene91918:intron | 25.0% |
| !! | TCTCAAATCTCAACATTTTT+AGG | + | chr5.3:27249933-27249952 | MS.gene91918:intron | 25.0% |
| !!! | ATATAGTTTTTTCAGTTACC+AGG | + | chr5.3:27247741-27247760 | MS.gene91918:intron | 25.0% |
| !!! | ATTGTATTACCTTGCTTTTA+AGG | - | chr5.3:27249303-27249322 | None:intergenic | 25.0% |
| !!! | CCACTGGTTTAAAAATTTTA+GGG | - | chr5.3:27247793-27247812 | None:intergenic | 25.0% |
| !!! | TCCACTGGTTTAAAAATTTT+AGG | - | chr5.3:27247794-27247813 | None:intergenic | 25.0% |
| ACAAGACCTATATAAAATCC+TGG | - | chr5.3:27247218-27247237 | None:intergenic | 30.0% | |
| AGCAAAAATCACAAATCACA+AGG | - | chr5.3:27249829-27249848 | None:intergenic | 30.0% | |
| ATAGTCGTAAACTATGGTAT+GGG | + | chr5.3:27247065-27247084 | MS.gene91918:intron | 30.0% | |
| ATGTTGTAAGTCTGTAGATT+TGG | - | chr5.3:27249690-27249709 | None:intergenic | 30.0% | |
| CAATTAAATCGCAGAAAGTT+GGG | + | chr5.3:27247701-27247720 | MS.gene91918:intron | 30.0% | |
| CATAAAAATGATATGGCATG+CGG | - | chr5.3:27248230-27248249 | None:intergenic | 30.0% | |
| CATACTTTAATCGTGATTAG+TGG | + | chr5.3:27247557-27247576 | MS.gene91918:intron | 30.0% | |
| CGTTAAATGTCTTTATTGGA+TGG | + | chr5.3:27249628-27249647 | MS.gene91918:intron | 30.0% | |
| GATGGAGATAAGTTCAATAT+TGG | + | chr5.3:27249646-27249665 | MS.gene91918:intron | 30.0% | |
| GCAAAAATCACAAATCACAA+GGG | - | chr5.3:27249828-27249847 | None:intergenic | 30.0% | |
| GCATCATGAATCATTGTATT+GGG | + | chr5.3:27247618-27247637 | MS.gene91918:intron | 30.0% | |
| GCTATATGCCAAAATCAAAA+GGG | - | chr5.3:27249338-27249357 | None:intergenic | 30.0% | |
| GCTGGAATTACTAATACTAT+TGG | + | chr5.3:27246969-27246988 | MS.gene91918:CDS | 30.0% | |
| GTTAATCGCATGCAAAAATA+TGG | + | chr5.3:27246460-27246479 | MS.gene91918:intron | 30.0% | |
| TAAATTGTGAGATCGTAACA+TGG | + | chr5.3:27247449-27247468 | MS.gene91918:intron | 30.0% | |
| TACTCTTGTCTAAACTTACA+TGG | + | chr5.3:27249127-27249146 | MS.gene91918:intron | 30.0% | |
| TAGTAAATCCATCAAAAGCA+AGG | - | chr5.3:27249265-27249284 | None:intergenic | 30.0% | |
| TATAGTCGTAAACTATGGTA+TGG | + | chr5.3:27247064-27247083 | MS.gene91918:intron | 30.0% | |
| TATGTTGGGCATGAATTTAT+GGG | + | chr5.3:27250077-27250096 | MS.gene91918:CDS | 30.0% | |
| TGCATCATGAATCATTGTAT+TGG | + | chr5.3:27247617-27247636 | MS.gene91918:intron | 30.0% | |
| TGCTATATGCCAAAATCAAA+AGG | - | chr5.3:27249339-27249358 | None:intergenic | 30.0% | |
| TGGTAGACAGTAATTATACA+TGG | - | chr5.3:27246680-27246699 | None:intergenic | 30.0% | |
| TGTTCAAATGTCTTTAGCAT+AGG | + | chr5.3:27248258-27248277 | MS.gene91918:intron | 30.0% | |
| TGTTGTAAGTCTGTAGATTT+GGG | - | chr5.3:27249689-27249708 | None:intergenic | 30.0% | |
| TTATGTTGGGCATGAATTTA+TGG | + | chr5.3:27250076-27250095 | MS.gene91918:CDS | 30.0% | |
| TTCATCATTTGCACTTCTAA+AGG | + | chr5.3:27249066-27249085 | MS.gene91918:CDS | 30.0% | |
| TTGAATGTAATCACATGTGT+AGG | + | chr5.3:27246375-27246394 | MS.gene91918:intron | 30.0% | |
| TTTATGACACTTCTAATCAG+CGG | - | chr5.3:27246436-27246455 | None:intergenic | 30.0% | |
| ! | AGACTTGCTTAACTCATTAT+CGG | - | chr5.3:27248123-27248142 | None:intergenic | 30.0% |
| ! | ATAGGACCAGGATTTTATAT+AGG | + | chr5.3:27247209-27247228 | MS.gene91918:intron | 30.0% |
| ! | ATTCCTATACTTTGAGTTAC+AGG | + | chr5.3:27248509-27248528 | MS.gene91918:intron | 30.0% |
| ! | CCCTAAAATTTTTAAACCAG+TGG | + | chr5.3:27247790-27247809 | MS.gene91918:intron | 30.0% |
| ! | TATAACATTTTACCTGAGCA+GGG | - | chr5.3:27247034-27247053 | None:intergenic | 30.0% |
| ! | TTAAGATTTGAGGTAAAAGG+TGG | + | chr5.3:27248005-27248024 | MS.gene91918:intron | 30.0% |
| ! | TTATAACATTTTACCTGAGC+AGG | - | chr5.3:27247035-27247054 | None:intergenic | 30.0% |
| ! | TTCCTATACTTTGAGTTACA+GGG | + | chr5.3:27248510-27248529 | MS.gene91918:intron | 30.0% |
| ! | TTTTACTCCTTTCTTCTTTG+TGG | + | chr5.3:27249428-27249447 | MS.gene91918:intron | 30.0% |
| !! | AGAACGTGGTTTGTTTAATT+TGG | + | chr5.3:27246256-27246275 | MS.gene91918:CDS | 30.0% |
| !! | TATAGTGCTTAAAGTTGATG+TGG | + | chr5.3:27248075-27248094 | MS.gene91918:intron | 30.0% |
| !! | TTAGCTCTAATGACTCAATA+AGG | - | chr5.3:27247143-27247162 | None:intergenic | 30.0% |
| !!! | AAATTTTAGGGTTTTGGTCT+CGG | - | chr5.3:27247781-27247800 | None:intergenic | 30.0% |
| !!! | AACAAAATTGGCTAGTTTTG+TGG | + | chr5.3:27248609-27248628 | MS.gene91918:intron | 30.0% |
| !!! | AGTTTTTTGGGTGTCTTAAA+TGG | + | chr5.3:27248803-27248822 | MS.gene91918:intron | 30.0% |
| !!! | TCTTTTGTGATTTGGTTTTC+AGG | + | chr5.3:27246169-27246188 | MS.gene91918:intron | 30.0% |
| AAATGACATTTGACACGTGT+CGG | - | chr5.3:27246771-27246790 | None:intergenic | 35.0% | |
| AAGTCCTCAAAAATGATTCC+AGG | + | chr5.3:27248333-27248352 | MS.gene91918:CDS | 35.0% | |
| AATACTATTGGTCCTGCTAT+GGG | + | chr5.3:27246981-27247000 | MS.gene91918:CDS | 35.0% | |
| AATGGTTTCACTATTGGAGT+AGG | + | chr5.3:27248045-27248064 | MS.gene91918:intron | 35.0% | |
| ACCATTCCTTATACAGGAAT+AGG | - | chr5.3:27247935-27247954 | None:intergenic | 35.0% | |
| ACTATTGCTTTGTCTTTCTC+AGG | + | chr5.3:27250028-27250047 | MS.gene91918:intron | 35.0% | |
| ACTTTAATCGTGATTAGTGG+AGG | + | chr5.3:27247560-27247579 | MS.gene91918:intron | 35.0% | |
| ATAGAATCAAGGTCAAATGC+GGG | + | chr5.3:27247258-27247277 | MS.gene91918:intron | 35.0% | |
| ATATGCCAAAATCAAAAGGG+AGG | - | chr5.3:27249335-27249354 | None:intergenic | 35.0% | |
| ATCAATGTTGAAACCAAGCA+AGG | - | chr5.3:27247175-27247194 | None:intergenic | 35.0% | |
| ATCCATAATAGACAGTCCTA+AGG | - | chr5.3:27249752-27249771 | None:intergenic | 35.0% | |
| ATCTACAGACTTACAACATC+AGG | + | chr5.3:27249691-27249710 | MS.gene91918:intron | 35.0% | |
| ATGTGCAGTGATAAAGATCT+GGG | + | chr5.3:27246902-27246921 | MS.gene91918:intron | 35.0% | |
| ATGTTGGGCATGAATTTATG+GGG | + | chr5.3:27250078-27250097 | MS.gene91918:CDS | 35.0% | |
| CAAGATAACATTCACCCAAA+AGG | - | chr5.3:27248668-27248687 | None:intergenic | 35.0% | |
| CATAGAATCAAGGTCAAATG+CGG | + | chr5.3:27247257-27247276 | MS.gene91918:intron | 35.0% | |
| CATGAATCATTGTATTGGGA+AGG | + | chr5.3:27247622-27247641 | MS.gene91918:intron | 35.0% | |
| CATGATTAGTGGGAATAGAA+AGG | + | chr5.3:27247659-27247678 | MS.gene91918:intron | 35.0% | |
| CTAAAAAATTGGTCCTTGCT+TGG | + | chr5.3:27247159-27247178 | MS.gene91918:intron | 35.0% | |
| CTTTCCTTTCTCTCAACATT+CGG | + | chr5.3:27248750-27248769 | MS.gene91918:intron | 35.0% | |
| GAAGAAAGGAGTAAAAAACG+AGG | - | chr5.3:27249424-27249443 | None:intergenic | 35.0% | |
| GAAGTCGTTGAGTCTTTAAA+TGG | + | chr5.3:27248027-27248046 | MS.gene91918:intron | 35.0% | |
| GAATGTTGAGAGAAAGGAAA+GGG | - | chr5.3:27248751-27248770 | None:intergenic | 35.0% | |
| GCAAATTCATACAACAAGTC+AGG | - | chr5.3:27247600-27247619 | None:intergenic | 35.0% | |
| GCAATTAAATCGCAGAAAGT+TGG | + | chr5.3:27247700-27247719 | MS.gene91918:intron | 35.0% | |
| GTGGAGCTATATTTAAACCT+CGG | + | chr5.3:27247368-27247387 | MS.gene91918:intron | 35.0% | |
| TAATACTATTGGTCCTGCTA+TGG | + | chr5.3:27246980-27246999 | MS.gene91918:CDS | 35.0% | |
| TATGTAATCCCAAGTTTGGT+AGG | - | chr5.3:27247505-27247524 | None:intergenic | 35.0% | |
| TATGTGCAGTGATAAAGATC+TGG | + | chr5.3:27246901-27246920 | MS.gene91918:intron | 35.0% | |
| TATTTAAACCTCGGTAAGCA+AGG | + | chr5.3:27247377-27247396 | MS.gene91918:intron | 35.0% | |
| TCTCACAATTTACGATCTTG+TGG | - | chr5.3:27247441-27247460 | None:intergenic | 35.0% | |
| TGAGTTAAGCAAGTCTATCA+TGG | + | chr5.3:27248127-27248146 | MS.gene91918:intron | 35.0% | |
| TGGTATCTTCACTATTGAGT+GGG | + | chr5.3:27250316-27250335 | MS.gene91918:CDS | 35.0% | |
| TTAAACCAGTGGAATCTATG+AGG | + | chr5.3:27247801-27247820 | MS.gene91918:intron | 35.0% | |
| TTCAATGCAGTTATGCTGAT+GGG | + | chr5.3:27248974-27248993 | MS.gene91918:intron | 35.0% | |
| TTGCTTAACTCATTATCGGT+GGG | - | chr5.3:27248119-27248138 | None:intergenic | 35.0% | |
| TTTCAAGCCACAAAGAAGAA+AGG | - | chr5.3:27249438-27249457 | None:intergenic | 35.0% | |
| TTTCCTTTCTCTCAACATTC+GGG | + | chr5.3:27248751-27248770 | MS.gene91918:intron | 35.0% | |
| ! | ATTTTACTGTATTGCTGCTG+TGG | + | chr5.3:27250198-27250217 | MS.gene91918:CDS | 35.0% |
| ! | GTGTTCTTTTTACTACATGC+AGG | + | chr5.3:27248302-27248321 | MS.gene91918:intron | 35.0% |
| ! | TATTTACCAAGGCATTCTTC+AGG | + | chr5.3:27246068-27246087 | MS.gene91918:CDS | 35.0% |
| ! | TCACGGTCACATTTTTAAAC+CGG | + | chr5.3:27246514-27246533 | MS.gene91918:intron | 35.0% |
| ! | TCCTATACTTTGAGTTACAG+GGG | + | chr5.3:27248511-27248530 | MS.gene91918:intron | 35.0% |
| ! | TCTGTAGTTCTTGTCCTTTT+GGG | + | chr5.3:27248651-27248670 | MS.gene91918:intron | 35.0% |
| ! | TGTGTTACTATGGTATTCTC+TGG | + | chr5.3:27250366-27250385 | MS.gene91918:CDS | 35.0% |
| ! | TTCTGTAGTTCTTGTCCTTT+TGG | + | chr5.3:27248650-27248669 | MS.gene91918:intron | 35.0% |
| !! | ATACAATTGGCAATTTGCTG+AGG | + | chr5.3:27248404-27248423 | MS.gene91918:intron | 35.0% |
| !! | GACTGTGAGGTTTTCTAAAA+GGG | + | chr5.3:27248280-27248299 | MS.gene91918:intron | 35.0% |
| !! | TGTACCTGGAATCATTTTTG+AGG | - | chr5.3:27248340-27248359 | None:intergenic | 35.0% |
| !! | TTAAAGTTGATGTGGCTATG+TGG | + | chr5.3:27248083-27248102 | MS.gene91918:intron | 35.0% |
| !! | TTCTTGAACCTTGCTTTTGA+TGG | + | chr5.3:27249254-27249273 | MS.gene91918:CDS | 35.0% |
| !!! | AATTTTAGGGTTTTGGTCTC+GGG | - | chr5.3:27247780-27247799 | None:intergenic | 35.0% |
| !!! | GATTTCCTCCCTTTTGATTT+TGG | + | chr5.3:27249327-27249346 | MS.gene91918:intron | 35.0% |
| !!! | TGTGGATTTTGAAATGCAAG+TGG | + | chr5.3:27246137-27246156 | MS.gene91918:intron | 35.0% |
| !!! | TTTTCATATTAGCACCGACA+CGG | + | chr5.3:27246299-27246318 | MS.gene91918:intron | 35.0% |
| !!! | TTTTTGGGTGTCTTAAATGG+AGG | + | chr5.3:27248806-27248825 | MS.gene91918:intron | 35.0% |
| AAAATCCTGGTCCTATGTGA+CGG | - | chr5.3:27247205-27247224 | None:intergenic | 40.0% | |
| AAACATAGCCCATATCCAAG+AGG | - | chr5.3:27249236-27249255 | None:intergenic | 40.0% | |
| AAAGCTTCAATTCCCATAGC+AGG | - | chr5.3:27246996-27247015 | None:intergenic | 40.0% | |
| AACATCAGGCTTACTCAGTA+AGG | + | chr5.3:27249705-27249724 | MS.gene91918:intron | 40.0% | |
| ACAATCCTCATAGATTCCAC+TGG | - | chr5.3:27247809-27247828 | None:intergenic | 40.0% | |
| AGTGCAACACCTAGTTAATC+CGG | - | chr5.3:27246536-27246555 | None:intergenic | 40.0% | |
| ATCACAAATCACAAGGGAGA+CGG | - | chr5.3:27249822-27249841 | None:intergenic | 40.0% | |
| ATCCCCTTTCAACAAAGCAA+TGG | + | chr5.3:27250340-27250359 | MS.gene91918:CDS | 40.0% | |
| CAAATGCTCCTCTTGGATAT+GGG | + | chr5.3:27249225-27249244 | MS.gene91918:CDS | 40.0% | |
| CGAATGTTGAGAGAAAGGAA+AGG | - | chr5.3:27248752-27248771 | None:intergenic | 40.0% | |
| CTAAAGGTCAGGAAATTCTC+AGG | + | chr5.3:27249082-27249101 | MS.gene91918:intron | 40.0% | |
| CTTCAATGCAGTTATGCTGA+TGG | + | chr5.3:27248973-27248992 | MS.gene91918:intron | 40.0% | |
| CTTGCTTAACTCATTATCGG+TGG | - | chr5.3:27248120-27248139 | None:intergenic | 40.0% | |
| GAAGGAACCATTCCTTATAC+AGG | - | chr5.3:27247941-27247960 | None:intergenic | 40.0% | |
| GATGCTTACAAATTTGCGAG+TGG | - | chr5.3:27250295-27250314 | None:intergenic | 40.0% | |
| GCCTATTCCTGTATAAGGAA+TGG | + | chr5.3:27247931-27247950 | MS.gene91918:intron | 40.0% | |
| GTAAGGCCTATTCCTGTATA+AGG | + | chr5.3:27247926-27247945 | MS.gene91918:intron | 40.0% | |
| GTACCCAAAAACAAGTGCTT+GGG | + | chr5.3:27250050-27250069 | MS.gene91918:CDS | 40.0% | |
| GTATATTAGTTACCCTGCTC+AGG | + | chr5.3:27247019-27247038 | MS.gene91918:CDS | 40.0% | |
| GTCCTTAGGACTGTCTATTA+TGG | + | chr5.3:27249747-27249766 | MS.gene91918:intron | 40.0% | |
| GTCTACATCCTAAACAGGAT+CGG | + | chr5.3:27247408-27247427 | MS.gene91918:intron | 40.0% | |
| GTCTTAAATGGAGGAGCTTA+TGG | + | chr5.3:27248815-27248834 | MS.gene91918:intron | 40.0% | |
| GTGGTATCTTCACTATTGAG+TGG | + | chr5.3:27250315-27250334 | MS.gene91918:CDS | 40.0% | |
| TAACGAAATGCATCTCTAGC+AGG | + | chr5.3:27247113-27247132 | MS.gene91918:intron | 40.0% | |
| TAAGATCTTGCAAGGTGAGA+TGG | - | chr5.3:27247858-27247877 | None:intergenic | 40.0% | |
| TACCCAAAAACAAGTGCTTG+GGG | + | chr5.3:27250051-27250070 | MS.gene91918:CDS | 40.0% | |
| TCAGCATAACTGCATTGAAG+TGG | - | chr5.3:27248973-27248992 | None:intergenic | 40.0% | |
| TCCCCTGTAACTCAAAGTAT+AGG | - | chr5.3:27248515-27248534 | None:intergenic | 40.0% | |
| TCCCCTTTCAACAAAGCAAT+GGG | + | chr5.3:27250341-27250360 | MS.gene91918:CDS | 40.0% | |
| TCTACATCCTAAACAGGATC+GGG | + | chr5.3:27247409-27247428 | MS.gene91918:intron | 40.0% | |
| TCTTAAAGTCGTGAGATCGT+AGG | + | chr5.3:27247873-27247892 | MS.gene91918:intron | 40.0% | |
| TGACATGTGAGTACAACAAC+AGG | - | chr5.3:27249871-27249890 | None:intergenic | 40.0% | |
| TGATGTTGATACCGTCACAT+AGG | + | chr5.3:27247191-27247210 | MS.gene91918:intron | 40.0% | |
| TGCTAAAGTTCTACTTCCGT+TGG | - | chr5.3:27248585-27248604 | None:intergenic | 40.0% | |
| TGGATTTACTAATGCAACCC+AGG | + | chr5.3:27249274-27249293 | MS.gene91918:CDS | 40.0% | |
| TGTGCAGTGATAAAGATCTG+GGG | + | chr5.3:27246903-27246922 | MS.gene91918:intron | 40.0% | |
| TGTTAGCTAAAGAGCCAAAC+CGG | - | chr5.3:27250260-27250279 | None:intergenic | 40.0% | |
| TTCTTGACTATAAGCCGGTT+TGG | + | chr5.3:27250243-27250262 | MS.gene91918:CDS | 40.0% | |
| ! | AAAATATCCCATGCTGCTTC+TGG | - | chr5.3:27250183-27250202 | None:intergenic | 40.0% |
| ! | AAATTTGCGAGTGGTAGTGA+TGG | - | chr5.3:27250286-27250305 | None:intergenic | 40.0% |
| ! | AAGCACGTGAGCATAAGTTT+TGG | - | chr5.3:27249392-27249411 | None:intergenic | 40.0% |
| ! | AAGTGCTTGGGGTATTATGT+TGG | + | chr5.3:27250062-27250081 | MS.gene91918:CDS | 40.0% |
| ! | ACATATTATCAGCGGTGTCA+AGG | - | chr5.3:27246339-27246358 | None:intergenic | 40.0% |
| ! | ACTTTGAGTTACAGGGGATT+TGG | + | chr5.3:27248517-27248536 | MS.gene91918:intron | 40.0% |
| ! | AGTGCTTGGGGTATTATGTT+GGG | + | chr5.3:27250063-27250082 | MS.gene91918:CDS | 40.0% |
| ! | CATTTGCACTTCTAAAGGTC+AGG | + | chr5.3:27249071-27249090 | MS.gene91918:intron | 40.0% |
| ! | CTTTGAGTTACAGGGGATTT+GGG | + | chr5.3:27248518-27248537 | MS.gene91918:intron | 40.0% |
| ! | GATTAACTAGGTGTTGCACT+TGG | + | chr5.3:27246536-27246555 | MS.gene91918:intron | 40.0% |
| ! | GCATCTTGCGTTTTTGAACT+TGG | + | chr5.3:27246230-27246249 | MS.gene91918:CDS | 40.0% |
| ! | GGACTGTGAGGTTTTCTAAA+AGG | + | chr5.3:27248279-27248298 | MS.gene91918:intron | 40.0% |
| ! | TCGCAAATTTGTAAGCATCG+TGG | + | chr5.3:27250296-27250315 | MS.gene91918:CDS | 40.0% |
| ! | TTTGAGTTACAGGGGATTTG+GGG | + | chr5.3:27248519-27248538 | MS.gene91918:intron | 40.0% |
| ! | TTTTTACTACATGCAGGTGC+TGG | + | chr5.3:27248308-27248327 | MS.gene91918:intron | 40.0% |
| !! | ACCTTGCTTTTAAGGAATCC+TGG | - | chr5.3:27249295-27249314 | None:intergenic | 40.0% |
| !! | AGGAAGGTACAAAGGTATTC+TGG | - | chr5.3:27249031-27249050 | None:intergenic | 40.0% |
| !! | ATACCCCAAGCACTTGTTTT+TGG | - | chr5.3:27250057-27250076 | None:intergenic | 40.0% |
| !! | CACGACTTTAAGATCTTGCA+AGG | - | chr5.3:27247866-27247885 | None:intergenic | 40.0% |
| !! | CCTTGCTTTTAAGGAATCCT+GGG | - | chr5.3:27249294-27249313 | None:intergenic | 40.0% |
| !! | GGAAGGTACAAAGGTATTCT+GGG | - | chr5.3:27249030-27249049 | None:intergenic | 40.0% |
| !! | TACCCCAAGCACTTGTTTTT+GGG | - | chr5.3:27250056-27250075 | None:intergenic | 40.0% |
| !! | TTTAGACAAGAGTACCAGAC+AGG | - | chr5.3:27249121-27249140 | None:intergenic | 40.0% |
| AACAACATCCAGAAGCAGCA+TGG | + | chr5.3:27250172-27250191 | MS.gene91918:CDS | 45.0% | |
| AATATACGCCGACCAGATTC+CGG | - | chr5.3:27246052-27246071 | None:intergenic | 45.0% | |
| AATCGTGATTAGTGGAGGAG+TGG | + | chr5.3:27247565-27247584 | MS.gene91918:intron | 45.0% | |
| ACAACATCCAGAAGCAGCAT+GGG | + | chr5.3:27250173-27250192 | MS.gene91918:CDS | 45.0% | |
| AGCATCAAGCACAATGTACC+TGG | - | chr5.3:27248354-27248373 | None:intergenic | 45.0% | |
| ATCACAGTCGCTTGTGGTTT+AGG | + | chr5.3:27247301-27247320 | MS.gene91918:intron | 45.0% | |
| ATCGTGATTAGTGGAGGAGT+GGG | + | chr5.3:27247566-27247585 | MS.gene91918:intron | 45.0% | |
| ATGAAACACCTCCAGCAACA+AGG | - | chr5.3:27249051-27249070 | None:intergenic | 45.0% | |
| CATACCAGATCTACCTCAAG+TGG | + | chr5.3:27250394-27250413 | MS.gene91918:CDS | 45.0% | |
| CATGTGTAGGATGCTTGACA+CGG | + | chr5.3:27246388-27246407 | MS.gene91918:intron | 45.0% | |
| CATTATCGGTGGGACTTAGT+GGG | - | chr5.3:27248109-27248128 | None:intergenic | 45.0% | |
| CCAAATGCTCCTCTTGGATA+TGG | + | chr5.3:27249224-27249243 | MS.gene91918:CDS | 45.0% | |
| CCCAGGATTCCTTAAAAGCA+AGG | + | chr5.3:27249291-27249310 | MS.gene91918:CDS | 45.0% | |
| CCCCTTTCAACAAAGCAATG+GGG | + | chr5.3:27250342-27250361 | MS.gene91918:CDS | 45.0% | |
| CCCTTTCAACAAAGCAATGG+GGG | + | chr5.3:27250343-27250362 | MS.gene91918:CDS | 45.0% | |
| CGTGAGATCCTACCAAACTT+GGG | + | chr5.3:27247494-27247513 | MS.gene91918:intron | 45.0% | |
| CTACATCCTAAACAGGATCG+GGG | + | chr5.3:27247410-27247429 | MS.gene91918:intron | 45.0% | |
| CTACCCGAATGTTGAGAGAA+AGG | - | chr5.3:27248757-27248776 | None:intergenic | 45.0% | |
| CTCAAAGACTATCAGCAAGC+TGG | + | chr5.3:27249196-27249215 | MS.gene91918:CDS | 45.0% | |
| CTTGCTGATAGTCTTTGAGC+TGG | - | chr5.3:27249195-27249214 | None:intergenic | 45.0% | |
| CTTTCTCTCAACATTCGGGT+AGG | + | chr5.3:27248755-27248774 | MS.gene91918:intron | 45.0% | |
| CTTTGTACCTTCCTTGTTGC+TGG | + | chr5.3:27249037-27249056 | MS.gene91918:CDS | 45.0% | |
| GGCTGATGAAATTGGTCCTT+AGG | + | chr5.3:27249733-27249752 | MS.gene91918:intron | 45.0% | |
| GGTACCCAAAAACAAGTGCT+TGG | + | chr5.3:27250049-27250068 | MS.gene91918:intron | 45.0% | |
| GTCTTTAGCATAGGACTGTG+AGG | + | chr5.3:27248267-27248286 | MS.gene91918:intron | 45.0% | |
| GTGTTTCCTGAAGAATGCCT+TGG | - | chr5.3:27246077-27246096 | None:intergenic | 45.0% | |
| TAAATGGAGGAGCTTATGGC+TGG | + | chr5.3:27248819-27248838 | MS.gene91918:intron | 45.0% | |
| TACATGTTTGCATGGCCAAG+TGG | + | chr5.3:27250120-27250139 | MS.gene91918:CDS | 45.0% | |
| TCATTATCGGTGGGACTTAG+TGG | - | chr5.3:27248110-27248129 | None:intergenic | 45.0% | |
| TCGGAGTCTACATCCTAAAC+AGG | + | chr5.3:27247403-27247422 | MS.gene91918:intron | 45.0% | |
| TCGTGAGATCCTACCAAACT+TGG | + | chr5.3:27247493-27247512 | MS.gene91918:intron | 45.0% | |
| TCTTGACTACCATGCTGGTA+AGG | + | chr5.3:27247909-27247928 | MS.gene91918:intron | 45.0% | |
| TGGATCGTGAGATCGTAACA+TGG | + | chr5.3:27247469-27247488 | MS.gene91918:intron | 45.0% | |
| TGGTCGGCGTATATTTACCA+AGG | + | chr5.3:27246057-27246076 | MS.gene91918:CDS | 45.0% | |
| TTCAGGTCAACGAAGCGATT+TGG | + | chr5.3:27246186-27246205 | MS.gene91918:intron | 45.0% | |
| TTGACGTGTCAGTGTCTTGT+TGG | + | chr5.3:27246810-27246829 | MS.gene91918:intron | 45.0% | |
| TTGATTAACCACGTGTCACG+CGG | + | chr5.3:27246635-27246654 | MS.gene91918:intron | 45.0% | |
| TTTCTCACAGTGCGTATCCT+GGG | + | chr5.3:27247337-27247356 | MS.gene91918:intron | 45.0% | |
| ! | ACCCCCATTGCTTTGTTGAA+AGG | - | chr5.3:27250347-27250366 | None:intergenic | 45.0% |
| ! | ACTTCTAATCAGCGGTGTCA+AGG | - | chr5.3:27246428-27246447 | None:intergenic | 45.0% |
| ! | AGGTTGCTGGCTGATGAAAT+TGG | + | chr5.3:27249725-27249744 | MS.gene91918:intron | 45.0% |
| ! | CAGCAACAAGGAAGGTACAA+AGG | - | chr5.3:27249039-27249058 | None:intergenic | 45.0% |
| ! | CCCCATTGCTTTGTTGAAAG+GGG | - | chr5.3:27250345-27250364 | None:intergenic | 45.0% |
| ! | CCCCCATTGCTTTGTTGAAA+GGG | - | chr5.3:27250346-27250365 | None:intergenic | 45.0% |
| ! | TTTTCTCACAGTGCGTATCC+TGG | + | chr5.3:27247336-27247355 | MS.gene91918:intron | 45.0% |
| !! | CCATATCCAAGAGGAGCATT+TGG | - | chr5.3:27249227-27249246 | None:intergenic | 45.0% |
| !! | CTGATGGGTTCACTCGTATA+CGG | + | chr5.3:27248989-27249008 | MS.gene91918:CDS | 45.0% |
| !! | GGTACAAAGGTATTCTGGGA+TGG | - | chr5.3:27249026-27249045 | None:intergenic | 45.0% |
| AACACCTCCAGCAACAAGGA+AGG | - | chr5.3:27249047-27249066 | None:intergenic | 50.0% | |
| ACCTCGGTAAGCAAGGTAGT+CGG | + | chr5.3:27247384-27247403 | MS.gene91918:intron | 50.0% | |
| AGAAGGCGAGAACAAGGATG+CGG | - | chr5.3:27246023-27246042 | None:intergenic | 50.0% | |
| AGGAATAGGCCTTACCAGCA+TGG | - | chr5.3:27247921-27247940 | None:intergenic | 50.0% | |
| ATCCTAAACAGGATCGGGGA+AGG | + | chr5.3:27247414-27247433 | MS.gene91918:intron | 50.0% | |
| ATCTTGCAAGGTGAGATGGC+TGG | - | chr5.3:27247854-27247873 | None:intergenic | 50.0% | |
| GATAACAGACCTCACCTGTC+TGG | + | chr5.3:27249104-27249123 | MS.gene91918:intron | 50.0% | |
| GCACATCCAAATGCTCCTCT+TGG | + | chr5.3:27249218-27249237 | MS.gene91918:CDS | 50.0% | |
| GCACTCCAATAAGACCACCA+AGG | - | chr5.3:27246951-27246970 | None:intergenic | 50.0% | |
| GCAGTGATAAAGATCTGGGG+TGG | + | chr5.3:27246906-27246925 | MS.gene91918:intron | 50.0% | |
| GCCTCATATCCACTACCACT+TGG | - | chr5.3:27250138-27250157 | None:intergenic | 50.0% | |
| GGCTTACTCAGTAAGGTTGC+TGG | + | chr5.3:27249712-27249731 | MS.gene91918:intron | 50.0% | |
| GTCTGTCACACAATGTGTGC+AGG | + | chr5.3:27248185-27248204 | MS.gene91918:intron | 50.0% | |
| TAGGATGCTTGACACGGACA+CGG | + | chr5.3:27246394-27246413 | MS.gene91918:intron | 50.0% | |
| TCGTCAATCACAGTCGCTTG+TGG | + | chr5.3:27247295-27247314 | MS.gene91918:intron | 50.0% | |
| TGATACCGTCACATAGGACC+AGG | + | chr5.3:27247197-27247216 | MS.gene91918:intron | 50.0% | |
| TGATTAACCACGTGTCACGC+GGG | + | chr5.3:27246636-27246655 | MS.gene91918:intron | 50.0% | |
| TGTACCTTCCTTGTTGCTGG+AGG | + | chr5.3:27249040-27249059 | MS.gene91918:CDS | 50.0% | |
| TTTGAACTTGGCGCAGAACG+TGG | + | chr5.3:27246242-27246261 | MS.gene91918:CDS | 50.0% | |
| TTTGCATGGCCAAGTGGTAG+TGG | + | chr5.3:27250126-27250145 | MS.gene91918:CDS | 50.0% | |
| ! | GAAATACTGGTGGTGCTCCT+TGG | + | chr5.3:27246931-27246950 | MS.gene91918:CDS | 50.0% |
| ! | GCAATGGGGGTGTGTTACTA+TGG | + | chr5.3:27250356-27250375 | MS.gene91918:CDS | 50.0% |
| ! | GTGATAAAGATCTGGGGTGG+TGG | + | chr5.3:27246909-27246928 | MS.gene91918:intron | 50.0% |
| ! | TCTGCAACTTCTGCCACTTG+AGG | - | chr5.3:27250410-27250429 | None:intergenic | 50.0% |
| ! | TCTGCCACTTGAGGTAGATC+TGG | - | chr5.3:27250401-27250420 | None:intergenic | 50.0% |
| !! | ACAAGAGTACCAGACAGGTG+AGG | - | chr5.3:27249116-27249135 | None:intergenic | 50.0% |
| !! | ATCTGGGGTGGTGGAAATAC+TGG | + | chr5.3:27246918-27246937 | MS.gene91918:CDS | 50.0% |
| !! | GCCAAGTGGTAGTGGATATG+AGG | + | chr5.3:27250134-27250153 | MS.gene91918:CDS | 50.0% |
| !! | GTGCTCCTTGGTGGTCTTAT+TGG | + | chr5.3:27246943-27246962 | MS.gene91918:CDS | 50.0% |
| !! | TATTAGCACCGACACGGACA+CGG | + | chr5.3:27246305-27246324 | MS.gene91918:intron | 50.0% |
| !! | TATTGCTGCTGTGGTGCTGT+GGG | + | chr5.3:27250207-27250226 | MS.gene91918:CDS | 50.0% |
| !! | TGAGATCGTAGGTGCTGGAT+CGG | + | chr5.3:27247884-27247903 | MS.gene91918:intron | 50.0% |
| !! | TGGTGGTCTTATTGGAGTGC+TGG | + | chr5.3:27246951-27246970 | MS.gene91918:CDS | 50.0% |
| AGATGGCTGGATTCGCAGGT+GGG | - | chr5.3:27247841-27247860 | None:intergenic | 55.0% | |
| AGTCGTGAGATCGTAGGTGC+TGG | + | chr5.3:27247879-27247898 | MS.gene91918:intron | 55.0% | |
| CGGGATCTTGACTACCATGC+TGG | + | chr5.3:27247904-27247923 | MS.gene91918:intron | 55.0% | |
| GACCTTCCCCGATCCTGTTT+AGG | - | chr5.3:27247419-27247438 | None:intergenic | 55.0% | |
| TCCGACTACCTTGCTTACCG+AGG | - | chr5.3:27247388-27247407 | None:intergenic | 55.0% | |
| TGTCAATGCCGTGTCCGTGT+CGG | - | chr5.3:27246316-27246335 | None:intergenic | 55.0% | |
| ! | ATACTGGTGGTGCTCCTTGG+TGG | + | chr5.3:27246934-27246953 | MS.gene91918:CDS | 55.0% |
| ! | GTATTGCTGCTGTGGTGCTG+TGG | + | chr5.3:27250206-27250225 | MS.gene91918:CDS | 55.0% |
| !! | GAGATCGTAGGTGCTGGATC+GGG | + | chr5.3:27247885-27247904 | MS.gene91918:intron | 55.0% |
| !! | TGGGGTGGTGGAAATACTGG+TGG | + | chr5.3:27246921-27246940 | MS.gene91918:CDS | 55.0% |
| !! | TTAGGGTTTTGGTCTCGGGC+CGG | - | chr5.3:27247776-27247795 | None:intergenic | 55.0% |
| AGGCGAGAACAAGGATGCGG+CGG | - | chr5.3:27246020-27246039 | None:intergenic | 60.0% | |
| CACAGTGCGTATCCTGGGTG+TGG | + | chr5.3:27247342-27247361 | MS.gene91918:intron | 60.0% | |
| CACGCGGGTGTGCAGAATGT+GGG | + | chr5.3:27246651-27246670 | MS.gene91918:intron | 60.0% | |
| CGACGCAGAAGGCGAGAACA+AGG | - | chr5.3:27246029-27246048 | None:intergenic | 60.0% | |
| CGTATCCTGGGTGTGGAGTG+TGG | + | chr5.3:27247349-27247368 | MS.gene91918:intron | 60.0% | |
| GAGATGGCTGGATTCGCAGG+TGG | - | chr5.3:27247842-27247861 | None:intergenic | 60.0% | |
| GGTGAGATGGCTGGATTCGC+AGG | - | chr5.3:27247845-27247864 | None:intergenic | 60.0% | |
| TAGCTCCACACTCCACACCC+AGG | - | chr5.3:27247357-27247376 | None:intergenic | 60.0% | |
| TCACGCGGGTGTGCAGAATG+TGG | + | chr5.3:27246650-27246669 | MS.gene91918:intron | 60.0% | |
| !! | TAGGGTTTTGGTCTCGGGCC+GGG | - | chr5.3:27247775-27247794 | None:intergenic | 60.0% |
| AGTTACCAGGCCGCACGACC+CGG | + | chr5.3:27247754-27247773 | MS.gene91918:intron | 65.0% | |
| CCAGATTCCGGCGACGCAGA+AGG | - | chr5.3:27246040-27246059 | None:intergenic | 65.0% | |
| CCTTCTGCGTCGCCGGAATC+TGG | + | chr5.3:27246037-27246056 | MS.gene91918:CDS | 65.0% | |
| CTGCGTCGCCGGAATCTGGT+CGG | + | chr5.3:27246041-27246060 | MS.gene91918:CDS | 65.0% | |
| GTTCTCGCCTTCTGCGTCGC+CGG | + | chr5.3:27246030-27246049 | MS.gene91918:CDS | 65.0% | |
| CTGCACACCCGCGTGACACG+TGG | - | chr5.3:27246646-27246665 | None:intergenic | 70.0% | |
| TGGTCTCGGGCCGGGTCGTG+CGG | - | chr5.3:27247767-27247786 | None:intergenic | 75.0% | |
| ! | TCGGGCCGGGTCGTGCGGCC+TGG | - | chr5.3:27247762-27247781 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 27245994 | 27250458 | 27245994 | ID=MS.gene91918 |
| chr5.3 | mRNA | 27245994 | 27250458 | 27245994 | ID=MS.gene91918.t1;Parent=MS.gene91918 |
| chr5.3 | exon | 27245994 | 27246097 | 27245994 | ID=MS.gene91918.t1.exon1;Parent=MS.gene91918.t1 |
| chr5.3 | CDS | 27245994 | 27246097 | 27245994 | ID=cds.MS.gene91918.t1;Parent=MS.gene91918.t1 |
| chr5.3 | exon | 27246191 | 27246288 | 27246191 | ID=MS.gene91918.t1.exon2;Parent=MS.gene91918.t1 |
| chr5.3 | CDS | 27246191 | 27246288 | 27246191 | ID=cds.MS.gene91918.t1;Parent=MS.gene91918.t1 |
| chr5.3 | exon | 27246910 | 27247040 | 27246910 | ID=MS.gene91918.t1.exon3;Parent=MS.gene91918.t1 |
| chr5.3 | CDS | 27246910 | 27247040 | 27246910 | ID=cds.MS.gene91918.t1;Parent=MS.gene91918.t1 |
| chr5.3 | exon | 27248324 | 27248354 | 27248324 | ID=MS.gene91918.t1.exon4;Parent=MS.gene91918.t1 |
| chr5.3 | CDS | 27248324 | 27248354 | 27248324 | ID=cds.MS.gene91918.t1;Parent=MS.gene91918.t1 |
| chr5.3 | exon | 27248984 | 27249087 | 27248984 | ID=MS.gene91918.t1.exon5;Parent=MS.gene91918.t1 |
| chr5.3 | CDS | 27248984 | 27249087 | 27248984 | ID=cds.MS.gene91918.t1;Parent=MS.gene91918.t1 |
| chr5.3 | exon | 27249191 | 27249312 | 27249191 | ID=MS.gene91918.t1.exon6;Parent=MS.gene91918.t1 |
| chr5.3 | CDS | 27249191 | 27249312 | 27249191 | ID=cds.MS.gene91918.t1;Parent=MS.gene91918.t1 |
| chr5.3 | exon | 27250050 | 27250458 | 27250050 | ID=MS.gene91918.t1.exon7;Parent=MS.gene91918.t1 |
| chr5.3 | CDS | 27250050 | 27250458 | 27250050 | ID=cds.MS.gene91918.t1;Parent=MS.gene91918.t1 |
| Gene Sequence |
| Protein sequence |
