Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06117.t1 | RHN43517.1 | 99.4 | 669 | 4 | 0 | 1 | 669 | 1 | 669 | 0.00E+00 | 1251.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06117.t1 | Q03684 | 92.2 | 645 | 49 | 1 | 9 | 653 | 11 | 654 | 0.0e+00 | 1162.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06117.t1 | A0A396GXZ8 | 99.4 | 669 | 4 | 0 | 1 | 669 | 1 | 669 | 0.0e+00 | 1251.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050838 | MS.gene06117 | 0.809233 | 2.09E-50 | -1.69E-46 |
MS.gene051120 | MS.gene06117 | 0.807943 | 3.95E-50 | -1.69E-46 |
MS.gene051885 | MS.gene06117 | 0.803307 | 3.71E-49 | -1.69E-46 |
MS.gene052345 | MS.gene06117 | 0.830367 | 3.06E-55 | -1.69E-46 |
MS.gene052985 | MS.gene06117 | 0.832036 | 1.19E-55 | -1.69E-46 |
MS.gene053118 | MS.gene06117 | 0.829002 | 6.57E-55 | -1.69E-46 |
MS.gene053143 | MS.gene06117 | 0.806811 | 6.86E-50 | -1.69E-46 |
MS.gene05880 | MS.gene06117 | 0.811391 | 7.17E-51 | -1.69E-46 |
MS.gene06113 | MS.gene06117 | 0.909215 | 7.29E-82 | -1.69E-46 |
MS.gene06117 | MS.gene061898 | 0.805432 | 1.34E-49 | -1.69E-46 |
MS.gene06117 | MS.gene064737 | 0.811104 | 8.27E-51 | -1.69E-46 |
MS.gene06117 | MS.gene07038 | 0.81207 | 5.10E-51 | -1.69E-46 |
MS.gene06117 | MS.gene072641 | 0.810382 | 1.18E-50 | -1.69E-46 |
MS.gene06117 | MS.gene072709 | 0.833117 | 6.41E-56 | -1.69E-46 |
MS.gene06117 | MS.gene072905 | 0.835446 | 1.67E-56 | -1.69E-46 |
MS.gene06117 | MS.gene20056 | 0.930962 | 7.62E-94 | -1.69E-46 |
MS.gene06117 | MS.gene20202 | 0.994453 | 2.23E-207 | -1.69E-46 |
MS.gene06117 | MS.gene20206 | 0.921273 | 4.42E-88 | -1.69E-46 |
MS.gene06117 | MS.gene22441 | 0.926077 | 7.69E-91 | -1.69E-46 |
MS.gene06117 | MS.gene28632 | 0.807455 | 5.01E-50 | -1.69E-46 |
MS.gene06117 | MS.gene28989 | 0.818736 | 1.68E-52 | -1.69E-46 |
MS.gene06117 | MS.gene32620 | 0.840383 | 8.99E-58 | -1.69E-46 |
MS.gene06117 | MS.gene36285 | 0.820578 | 6.37E-53 | -1.69E-46 |
MS.gene06117 | MS.gene42377 | 0.802452 | 5.57E-49 | -1.69E-46 |
MS.gene06117 | MS.gene42649 | 0.805278 | 1.44E-49 | -1.69E-46 |
MS.gene06117 | MS.gene46302 | 0.810712 | 1.01E-50 | -1.69E-46 |
MS.gene06117 | MS.gene55832 | 0.910019 | 2.99E-82 | -1.69E-46 |
MS.gene06117 | MS.gene55836 | 0.999633 | 0.00E+00 | -1.69E-46 |
MS.gene06117 | MS.gene67881 | 0.808876 | 2.50E-50 | -1.69E-46 |
MS.gene06117 | MS.gene68106 | 0.806212 | 9.18E-50 | -1.69E-46 |
MS.gene06117 | MS.gene68420 | 0.802614 | 5.16E-49 | -1.69E-46 |
MS.gene06117 | MS.gene69754 | 0.80178 | 7.66E-49 | -1.69E-46 |
MS.gene06117 | MS.gene70521 | 0.835274 | 1.85E-56 | -1.69E-46 |
MS.gene06117 | MS.gene81658 | 0.853719 | 1.98E-61 | -1.69E-46 |
MS.gene06117 | MS.gene81660 | 0.858028 | 1.09E-62 | -1.69E-46 |
MS.gene06117 | MS.gene81663 | 0.859319 | 4.49E-63 | -1.69E-46 |
MS.gene06117 | MS.gene89100 | 0.812098 | 5.03E-51 | -1.69E-46 |
MS.gene06117 | MS.gene89570 | 0.804809 | 1.81E-49 | -1.69E-46 |
MS.gene06117 | MS.gene90626 | 0.846774 | 1.76E-59 | -1.69E-46 |
MS.gene06117 | MS.gene91918 | 0.808419 | 3.13E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06117.t1 | MTR_8g099945 | 99.253 | 669 | 5 | 0 | 1 | 669 | 1 | 669 | 0.0 | 1343 |
MS.gene06117.t1 | MTR_8g099795 | 96.285 | 646 | 23 | 1 | 1 | 646 | 2 | 646 | 0.0 | 1231 |
MS.gene06117.t1 | MTR_7g099680 | 64.921 | 630 | 214 | 5 | 36 | 661 | 7 | 633 | 0.0 | 837 |
MS.gene06117.t1 | MTR_4g063720 | 64.263 | 638 | 211 | 5 | 36 | 658 | 7 | 642 | 0.0 | 831 |
MS.gene06117.t1 | MTR_4g063710 | 65.961 | 614 | 203 | 4 | 36 | 645 | 7 | 618 | 0.0 | 829 |
MS.gene06117.t1 | MTR_7g024390 | 65.472 | 614 | 206 | 4 | 36 | 645 | 7 | 618 | 0.0 | 828 |
MS.gene06117.t1 | MTR_7g024580 | 64.038 | 634 | 215 | 5 | 36 | 665 | 7 | 631 | 0.0 | 827 |
MS.gene06117.t1 | MTR_4g130540 | 64.423 | 624 | 214 | 5 | 33 | 652 | 3 | 622 | 0.0 | 823 |
MS.gene06117.t1 | MTR_2g017730 | 54.992 | 611 | 249 | 6 | 33 | 633 | 3 | 597 | 0.0 | 667 |
MS.gene06117.t1 | MTR_6g033760 | 54.125 | 606 | 271 | 5 | 39 | 640 | 10 | 612 | 0.0 | 662 |
MS.gene06117.t1 | MTR_6g033850 | 53.542 | 607 | 275 | 5 | 39 | 641 | 10 | 613 | 0.0 | 652 |
MS.gene06117.t1 | MTR_7g026030 | 54.125 | 606 | 267 | 8 | 36 | 635 | 7 | 607 | 0.0 | 647 |
MS.gene06117.t1 | MTR_7g021440 | 54.486 | 613 | 269 | 7 | 36 | 642 | 7 | 615 | 0.0 | 640 |
MS.gene06117.t1 | MTR_2g038260 | 55.628 | 613 | 259 | 9 | 36 | 640 | 7 | 614 | 0.0 | 639 |
MS.gene06117.t1 | MTR_7g451380 | 53.268 | 612 | 276 | 7 | 36 | 640 | 7 | 615 | 0.0 | 636 |
MS.gene06117.t1 | MTR_7g025820 | 54.223 | 592 | 261 | 7 | 36 | 621 | 7 | 594 | 0.0 | 632 |
MS.gene06117.t1 | MTR_5g066800 | 52.006 | 623 | 278 | 8 | 36 | 641 | 7 | 625 | 0.0 | 630 |
MS.gene06117.t1 | MTR_2g032550 | 53.431 | 612 | 275 | 7 | 36 | 640 | 8 | 616 | 0.0 | 630 |
MS.gene06117.t1 | MTR_7g025720 | 52.805 | 606 | 275 | 8 | 36 | 635 | 7 | 607 | 0.0 | 624 |
MS.gene06117.t1 | MTR_6g033955 | 51.535 | 619 | 288 | 6 | 39 | 648 | 10 | 625 | 0.0 | 622 |
MS.gene06117.t1 | MTR_7g025790 | 52.815 | 604 | 274 | 8 | 36 | 633 | 7 | 605 | 0.0 | 622 |
MS.gene06117.t1 | MTR_6g033820 | 50.889 | 619 | 292 | 6 | 39 | 648 | 10 | 625 | 0.0 | 621 |
MS.gene06117.t1 | MTR_7g025760 | 51.320 | 606 | 285 | 7 | 36 | 635 | 7 | 608 | 0.0 | 619 |
MS.gene06117.t1 | MTR_7g025620 | 52.554 | 607 | 275 | 9 | 36 | 635 | 7 | 607 | 0.0 | 619 |
MS.gene06117.t1 | MTR_7g026170 | 53.659 | 615 | 270 | 11 | 36 | 641 | 7 | 615 | 0.0 | 618 |
MS.gene06117.t1 | MTR_6g033870 | 51.774 | 620 | 286 | 7 | 39 | 648 | 11 | 627 | 0.0 | 618 |
MS.gene06117.t1 | MTR_7g024030 | 51.895 | 607 | 281 | 8 | 36 | 636 | 7 | 608 | 0.0 | 615 |
MS.gene06117.t1 | MTR_7g025770 | 52.224 | 607 | 279 | 8 | 36 | 635 | 7 | 609 | 0.0 | 613 |
MS.gene06117.t1 | MTR_2g022050 | 52.874 | 609 | 277 | 7 | 39 | 640 | 10 | 615 | 0.0 | 612 |
MS.gene06117.t1 | MTR_8g032650 | 50.553 | 633 | 295 | 9 | 36 | 662 | 7 | 627 | 0.0 | 609 |
MS.gene06117.t1 | MTR_7g029415 | 52.960 | 625 | 280 | 11 | 25 | 641 | 3 | 621 | 0.0 | 609 |
MS.gene06117.t1 | MTR_7g026110 | 51.555 | 611 | 284 | 8 | 36 | 640 | 7 | 611 | 0.0 | 608 |
MS.gene06117.t1 | MTR_7g026090 | 51.882 | 611 | 282 | 7 | 36 | 640 | 7 | 611 | 0.0 | 608 |
MS.gene06117.t1 | MTR_7g011590 | 53.030 | 594 | 262 | 8 | 36 | 626 | 7 | 586 | 0.0 | 605 |
MS.gene06117.t1 | MTR_4g079590 | 51.405 | 605 | 283 | 8 | 36 | 633 | 7 | 607 | 0.0 | 603 |
MS.gene06117.t1 | MTR_2g437440 | 50.654 | 612 | 274 | 8 | 36 | 640 | 7 | 597 | 0.0 | 599 |
MS.gene06117.t1 | MTR_7g078190 | 51.967 | 610 | 278 | 10 | 36 | 635 | 7 | 611 | 0.0 | 597 |
MS.gene06117.t1 | MTR_7g025740 | 49.756 | 615 | 289 | 10 | 36 | 635 | 7 | 616 | 0.0 | 596 |
MS.gene06117.t1 | MTR_8g103930 | 50.565 | 619 | 269 | 10 | 39 | 640 | 12 | 610 | 0.0 | 585 |
MS.gene06117.t1 | MTR_2g010020 | 53.276 | 580 | 244 | 10 | 38 | 609 | 57 | 617 | 0.0 | 583 |
MS.gene06117.t1 | MTR_2g010020 | 53.276 | 580 | 244 | 10 | 38 | 609 | 56 | 616 | 0.0 | 583 |
MS.gene06117.t1 | MTR_4g092920 | 53.276 | 580 | 245 | 10 | 38 | 609 | 53 | 614 | 0.0 | 580 |
MS.gene06117.t1 | MTR_7g025630 | 49.751 | 603 | 284 | 9 | 36 | 635 | 7 | 593 | 0.0 | 578 |
MS.gene06117.t1 | MTR_7g078210 | 51.530 | 621 | 287 | 10 | 36 | 647 | 7 | 622 | 0.0 | 578 |
MS.gene06117.t1 | MTR_7g074460 | 50.495 | 606 | 272 | 8 | 36 | 635 | 7 | 590 | 0.0 | 576 |
MS.gene06117.t1 | MTR_2g038270 | 48.714 | 622 | 297 | 11 | 36 | 640 | 7 | 623 | 0.0 | 573 |
MS.gene06117.t1 | MTR_4g027145 | 49.920 | 627 | 287 | 12 | 36 | 641 | 7 | 627 | 0.0 | 570 |
MS.gene06117.t1 | MTR_7g026130 | 51.129 | 620 | 285 | 11 | 36 | 643 | 7 | 620 | 0.0 | 569 |
MS.gene06117.t1 | MTR_2g032580 | 49.673 | 612 | 267 | 8 | 36 | 640 | 7 | 584 | 0.0 | 569 |
MS.gene06117.t1 | MTR_1g017130 | 50.247 | 607 | 251 | 11 | 36 | 635 | 7 | 569 | 0.0 | 566 |
MS.gene06117.t1 | MTR_7g026140 | 51.060 | 613 | 271 | 11 | 36 | 640 | 7 | 598 | 0.0 | 565 |
MS.gene06117.t1 | MTR_7g025260 | 48.586 | 601 | 292 | 8 | 68 | 662 | 11 | 600 | 0.0 | 553 |
MS.gene06117.t1 | MTR_2g005690 | 48.892 | 632 | 285 | 12 | 38 | 658 | 71 | 675 | 0.0 | 547 |
MS.gene06117.t1 | MTR_6g033800 | 51.613 | 527 | 246 | 6 | 119 | 641 | 1 | 522 | 0.0 | 535 |
MS.gene06117.t1 | MTR_7g451360 | 47.869 | 610 | 253 | 10 | 36 | 640 | 7 | 556 | 0.0 | 532 |
MS.gene06117.t1 | MTR_7g007000 | 47.068 | 614 | 268 | 11 | 36 | 640 | 7 | 572 | 1.98e-175 | 513 |
MS.gene06117.t1 | MTR_4g092920 | 54.016 | 498 | 204 | 9 | 119 | 609 | 1 | 480 | 1.86e-172 | 503 |
MS.gene06117.t1 | MTR_7g035155 | 46.982 | 613 | 260 | 13 | 36 | 641 | 7 | 561 | 1.69e-168 | 494 |
MS.gene06117.t1 | MTR_1g041565 | 46.281 | 605 | 242 | 12 | 39 | 635 | 6 | 535 | 2.26e-164 | 483 |
MS.gene06117.t1 | MTR_2g040370 | 62.565 | 382 | 140 | 3 | 36 | 415 | 1027 | 1407 | 2.33e-153 | 486 |
MS.gene06117.t1 | MTR_2g040370 | 62.533 | 379 | 138 | 4 | 39 | 414 | 1414 | 1791 | 7.26e-144 | 460 |
MS.gene06117.t1 | MTR_2g040370 | 62.565 | 382 | 140 | 3 | 36 | 415 | 1027 | 1407 | 2.94e-153 | 486 |
MS.gene06117.t1 | MTR_2g040370 | 62.434 | 378 | 138 | 4 | 39 | 413 | 1414 | 1790 | 6.08e-143 | 457 |
MS.gene06117.t1 | MTR_2g040260 | 60.406 | 394 | 153 | 3 | 35 | 426 | 1035 | 1427 | 5.96e-153 | 480 |
MS.gene06117.t1 | MTR_2g040160 | 60.051 | 393 | 154 | 3 | 36 | 426 | 1107 | 1498 | 3.08e-151 | 475 |
MS.gene06117.t1 | MTR_4g063720 | 61.756 | 353 | 123 | 2 | 317 | 658 | 220 | 571 | 6.72e-151 | 449 |
MS.gene06117.t1 | MTR_4g063720 | 70.320 | 219 | 60 | 3 | 36 | 250 | 7 | 224 | 7.67e-97 | 310 |
MS.gene06117.t1 | MTR_2g032160 | 57.838 | 370 | 149 | 4 | 36 | 399 | 7 | 375 | 1.94e-145 | 431 |
MS.gene06117.t1 | MTR_2g040350 | 58.228 | 395 | 158 | 5 | 38 | 426 | 820 | 1213 | 7.45e-143 | 447 |
MS.gene06117.t1 | MTR_2g040220 | 59.487 | 390 | 148 | 5 | 36 | 416 | 1016 | 1404 | 2.96e-142 | 452 |
MS.gene06117.t1 | MTR_2g040220 | 39.819 | 221 | 65 | 5 | 461 | 663 | 1386 | 1556 | 7.97e-31 | 130 |
MS.gene06117.t1 | MTR_2g040350 | 58.228 | 395 | 158 | 5 | 38 | 426 | 1038 | 1431 | 1.71e-141 | 448 |
MS.gene06117.t1 | MTR_6g034005 | 40.951 | 547 | 296 | 12 | 109 | 641 | 2 | 535 | 5.17e-128 | 395 |
MS.gene06117.t1 | MTR_4g088515 | 47.442 | 430 | 133 | 9 | 39 | 462 | 277 | 619 | 7.14e-114 | 355 |
MS.gene06117.t1 | MTR_1g077230 | 60.498 | 281 | 104 | 4 | 36 | 310 | 7 | 286 | 1.37e-111 | 338 |
MS.gene06117.t1 | MTR_7g026080 | 61.265 | 253 | 87 | 5 | 36 | 278 | 7 | 258 | 1.68e-99 | 305 |
MS.gene06117.t1 | MTR_7g026050 | 41.304 | 368 | 186 | 4 | 269 | 635 | 1 | 339 | 5.96e-86 | 274 |
MS.gene06117.t1 | MTR_2g031670 | 52.364 | 275 | 105 | 7 | 21 | 274 | 7 | 276 | 1.66e-83 | 267 |
MS.gene06117.t1 | MTR_2g031670 | 55.224 | 67 | 29 | 1 | 368 | 434 | 275 | 340 | 7.24e-14 | 73.9 |
MS.gene06117.t1 | MTR_6g033855 | 40.476 | 378 | 138 | 5 | 113 | 487 | 6 | 299 | 2.31e-82 | 263 |
MS.gene06117.t1 | MTR_6g033810 | 43.675 | 332 | 138 | 3 | 113 | 441 | 6 | 291 | 7.03e-82 | 261 |
MS.gene06117.t1 | MTR_4g012050 | 36.387 | 382 | 236 | 4 | 37 | 413 | 2 | 381 | 1.54e-76 | 262 |
MS.gene06117.t1 | MTR_5g092570 | 28.676 | 680 | 390 | 18 | 37 | 639 | 2 | 663 | 2.07e-74 | 255 |
MS.gene06117.t1 | MTR_2g102180 | 32.112 | 464 | 292 | 7 | 37 | 483 | 2 | 459 | 3.87e-74 | 256 |
MS.gene06117.t1 | MTR_3g051300 | 31.034 | 493 | 320 | 11 | 37 | 520 | 2 | 483 | 2.40e-73 | 252 |
MS.gene06117.t1 | MTR_5g006180 | 31.609 | 522 | 294 | 13 | 29 | 520 | 19 | 507 | 3.68e-71 | 241 |
MS.gene06117.t1 | MTR_2g040355 | 35.205 | 463 | 129 | 12 | 216 | 666 | 2 | 305 | 3.63e-64 | 215 |
MS.gene06117.t1 | MTR_5g090110 | 31.504 | 492 | 281 | 13 | 39 | 508 | 29 | 486 | 3.12e-62 | 216 |
MS.gene06117.t1 | MTR_1g077240 | 42.905 | 296 | 158 | 4 | 346 | 640 | 1 | 286 | 7.58e-62 | 208 |
MS.gene06117.t1 | MTR_1207s0010 | 58.084 | 167 | 68 | 1 | 143 | 307 | 9 | 175 | 1.91e-61 | 203 |
MS.gene06117.t1 | MTR_3g081170 | 28.932 | 515 | 322 | 12 | 12 | 496 | 8 | 508 | 3.14e-61 | 220 |
MS.gene06117.t1 | MTR_5g097190 | 47.303 | 241 | 79 | 6 | 36 | 273 | 156 | 351 | 2.37e-58 | 201 |
MS.gene06117.t1 | MTR_6g478100 | 49.765 | 213 | 88 | 5 | 65 | 273 | 10 | 207 | 4.34e-58 | 199 |
MS.gene06117.t1 | MTR_4g115780 | 30.224 | 536 | 340 | 14 | 39 | 548 | 141 | 668 | 3.70e-54 | 197 |
MS.gene06117.t1 | MTR_4g107920 | 29.880 | 502 | 318 | 12 | 39 | 522 | 21 | 506 | 2.03e-53 | 192 |
MS.gene06117.t1 | MTR_5g005870 | 33.333 | 312 | 193 | 7 | 307 | 614 | 51 | 351 | 1.35e-46 | 170 |
MS.gene06117.t1 | MTR_1g116250 | 38.321 | 274 | 125 | 6 | 368 | 640 | 56 | 286 | 9.66e-44 | 159 |
MS.gene06117.t1 | MTR_7g026180 | 50.581 | 172 | 77 | 4 | 103 | 270 | 21 | 188 | 2.29e-41 | 154 |
MS.gene06117.t1 | MTR_7g026180 | 33.486 | 218 | 109 | 6 | 427 | 641 | 144 | 328 | 2.02e-19 | 90.5 |
MS.gene06117.t1 | MTR_7g074540 | 39.604 | 202 | 120 | 2 | 442 | 643 | 1 | 200 | 2.10e-39 | 144 |
MS.gene06117.t1 | MTR_7g451390 | 46.667 | 180 | 93 | 3 | 462 | 640 | 10 | 187 | 5.07e-39 | 142 |
MS.gene06117.t1 | MTR_6g033910 | 36.408 | 206 | 83 | 3 | 101 | 304 | 19 | 178 | 1.92e-34 | 130 |
MS.gene06117.t1 | MTR_2g017710 | 35.714 | 252 | 77 | 6 | 257 | 506 | 25 | 193 | 2.31e-34 | 132 |
MS.gene06117.t1 | MTR_5g005890 | 32.000 | 225 | 103 | 4 | 101 | 323 | 5 | 181 | 6.41e-28 | 111 |
MS.gene06117.t1 | MTR_1g068900 | 44.681 | 141 | 70 | 4 | 452 | 588 | 23 | 159 | 8.30e-28 | 110 |
MS.gene06117.t1 | MTR_6g033805 | 70.968 | 62 | 18 | 0 | 39 | 100 | 10 | 71 | 4.46e-24 | 96.7 |
MS.gene06117.t1 | MTR_4g027235 | 66.176 | 68 | 21 | 1 | 36 | 101 | 7 | 74 | 8.12e-23 | 92.8 |
MS.gene06117.t1 | MTR_4g027085 | 66.176 | 68 | 21 | 1 | 36 | 101 | 7 | 74 | 8.12e-23 | 92.8 |
MS.gene06117.t1 | MTR_4g115860 | 38.710 | 93 | 57 | 0 | 422 | 514 | 29 | 121 | 2.13e-16 | 76.3 |
MS.gene06117.t1 | MTR_6g033815 | 46.575 | 73 | 38 | 1 | 550 | 622 | 1 | 72 | 3.71e-15 | 72.4 |
MS.gene06117.t1 | MTR_2g040375 | 63.636 | 55 | 20 | 0 | 424 | 478 | 51 | 105 | 7.07e-15 | 72.0 |
MS.gene06117.t1 | MTR_7g026190 | 40.659 | 91 | 45 | 2 | 315 | 405 | 12 | 93 | 7.31e-13 | 68.6 |
MS.gene06117.t1 | MTR_7g026095 | 37.736 | 106 | 61 | 2 | 499 | 600 | 243 | 347 | 2.08e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06117.t1 | AT5G42020 | 89.836 | 669 | 67 | 1 | 1 | 669 | 1 | 668 | 0.0 | 1221 |
MS.gene06117.t1 | AT5G28540 | 91.190 | 647 | 56 | 1 | 1 | 647 | 1 | 646 | 0.0 | 1208 |
MS.gene06117.t1 | AT5G42020 | 91.091 | 651 | 57 | 1 | 19 | 669 | 24 | 673 | 0.0 | 1207 |
MS.gene06117.t1 | AT1G09080 | 77.419 | 651 | 142 | 2 | 1 | 647 | 11 | 660 | 0.0 | 1016 |
MS.gene06117.t1 | AT1G09080 | 77.743 | 647 | 137 | 2 | 1 | 647 | 11 | 650 | 0.0 | 1011 |
MS.gene06117.t1 | AT5G42020 | 77.015 | 670 | 96 | 5 | 1 | 669 | 1 | 613 | 0.0 | 998 |
MS.gene06117.t1 | AT3G12580 | 64.547 | 629 | 217 | 4 | 36 | 660 | 7 | 633 | 0.0 | 832 |
MS.gene06117.t1 | AT3G09440 | 66.234 | 616 | 198 | 5 | 36 | 645 | 7 | 618 | 0.0 | 828 |
MS.gene06117.t1 | AT3G09440 | 66.234 | 616 | 198 | 5 | 36 | 645 | 7 | 618 | 0.0 | 828 |
MS.gene06117.t1 | AT3G09440 | 66.234 | 616 | 198 | 5 | 36 | 645 | 7 | 618 | 0.0 | 828 |
MS.gene06117.t1 | AT3G09440 | 66.234 | 616 | 198 | 5 | 36 | 645 | 7 | 618 | 0.0 | 828 |
MS.gene06117.t1 | AT5G02500 | 64.984 | 614 | 209 | 4 | 36 | 645 | 7 | 618 | 0.0 | 824 |
MS.gene06117.t1 | AT1G16030 | 63.550 | 631 | 223 | 5 | 33 | 659 | 3 | 630 | 0.0 | 824 |
MS.gene06117.t1 | AT5G02490 | 64.984 | 614 | 209 | 4 | 36 | 645 | 7 | 618 | 0.0 | 820 |
MS.gene06117.t1 | AT1G56410 | 62.704 | 614 | 221 | 4 | 36 | 645 | 7 | 616 | 0.0 | 789 |
MS.gene06117.t1 | AT5G09590 | 54.138 | 580 | 240 | 11 | 38 | 609 | 59 | 620 | 0.0 | 584 |
MS.gene06117.t1 | AT4G37910 | 54.310 | 580 | 239 | 11 | 38 | 609 | 54 | 615 | 0.0 | 560 |
MS.gene06117.t1 | AT4G37910 | 54.310 | 580 | 239 | 11 | 38 | 609 | 54 | 615 | 0.0 | 560 |
MS.gene06117.t1 | AT4G24280 | 50.934 | 589 | 270 | 11 | 38 | 621 | 80 | 654 | 0.0 | 548 |
MS.gene06117.t1 | AT5G49910 | 49.196 | 622 | 292 | 13 | 38 | 654 | 80 | 682 | 0.0 | 547 |
MS.gene06117.t1 | AT5G02500 | 67.010 | 388 | 123 | 3 | 36 | 419 | 7 | 393 | 0.0 | 530 |
MS.gene06117.t1 | AT5G02500 | 48.077 | 104 | 53 | 1 | 542 | 645 | 386 | 488 | 1.97e-25 | 111 |
MS.gene06117.t1 | AT1G11660 | 28.356 | 663 | 400 | 14 | 37 | 639 | 2 | 649 | 7.18e-82 | 275 |
MS.gene06117.t1 | AT1G11660 | 28.356 | 663 | 400 | 14 | 37 | 639 | 2 | 649 | 7.18e-82 | 275 |
MS.gene06117.t1 | AT1G11660 | 28.356 | 663 | 400 | 14 | 37 | 639 | 2 | 649 | 7.18e-82 | 275 |
MS.gene06117.t1 | AT2G32120 | 32.877 | 511 | 312 | 10 | 39 | 534 | 31 | 525 | 2.41e-77 | 258 |
MS.gene06117.t1 | AT2G32120 | 32.877 | 511 | 312 | 10 | 39 | 534 | 31 | 525 | 2.41e-77 | 258 |
MS.gene06117.t1 | AT1G79930 | 32.159 | 454 | 285 | 7 | 37 | 473 | 2 | 449 | 3.15e-75 | 257 |
MS.gene06117.t1 | AT1G79930 | 32.159 | 454 | 285 | 7 | 37 | 473 | 2 | 449 | 5.83e-75 | 258 |
MS.gene06117.t1 | AT1G79920 | 31.718 | 454 | 287 | 7 | 37 | 473 | 2 | 449 | 4.20e-74 | 253 |
MS.gene06117.t1 | AT1G79920 | 31.718 | 454 | 287 | 7 | 37 | 473 | 2 | 449 | 4.20e-74 | 253 |
MS.gene06117.t1 | AT1G79920 | 31.718 | 454 | 287 | 7 | 37 | 473 | 2 | 449 | 4.20e-74 | 253 |
MS.gene06117.t1 | AT1G79920 | 31.718 | 454 | 287 | 7 | 37 | 473 | 2 | 449 | 4.94e-74 | 253 |
MS.gene06117.t1 | AT1G11660 | 28.275 | 626 | 374 | 14 | 74 | 639 | 2 | 612 | 9.21e-73 | 249 |
MS.gene06117.t1 | AT4G16660 | 26.075 | 721 | 403 | 21 | 36 | 639 | 24 | 731 | 7.94e-63 | 224 |
MS.gene06117.t1 | AT4G16660 | 26.075 | 721 | 403 | 21 | 36 | 639 | 48 | 755 | 9.82e-63 | 224 |
Find 194 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACATCAAAGATGGTCCTTTC+AGG | 0.185011 | 4.2:+3949863 | None:intergenic |
ACCAAGTTAGGGACTGTTAT+TGG | 0.230124 | 4.2:-3950049 | MS.gene06117:CDS |
ACCGCTGCTGCCATTGCTTA+TGG | 0.244088 | 4.2:-3949318 | MS.gene06117:CDS |
AACATTCTTGTCTTTGATCT+TGG | 0.281163 | 4.2:-3949270 | MS.gene06117:CDS |
GCAAACAACTGTTTCTATTC+AGG | 0.282305 | 4.2:-3948309 | MS.gene06117:intron |
GGAGCTCCAGGTGGTGCATC+AGG | 0.283486 | 4.2:-3947547 | MS.gene06117:CDS |
TGGTAAACAGCAGTGATAAT+TGG | 0.285966 | 4.2:+3947580 | None:intergenic |
CTCGGGAACTTTGATTTGTC+TGG | 0.291494 | 4.2:-3948130 | MS.gene06117:CDS |
TTCAAAAGTTGTTGTACCTT+TGG | 0.293588 | 4.2:+3948701 | None:intergenic |
TTTGATGTCAAGAGACTTAT+CGG | 0.304645 | 4.2:-3949848 | MS.gene06117:CDS |
GAGGAAGGGACCACCAAGTT+AGG | 0.330316 | 4.2:-3950061 | MS.gene06117:CDS |
CAAACGGTATTCTAAATGTT+AGG | 0.333992 | 4.2:-3947951 | MS.gene06117:CDS |
GTTTGTCCTTGTCACTGATT+TGG | 0.335858 | 4.2:+3947743 | None:intergenic |
GTGGGGATGACAGTGTTTCT+AGG | 0.341786 | 4.2:+3948368 | None:intergenic |
TGCTTCTTTCTTCAGATTTG+AGG | 0.345147 | 4.2:-3949734 | MS.gene06117:intron |
ACCGACGATGAGAGATTGAT+TGG | 0.362358 | 4.2:-3949917 | MS.gene06117:CDS |
AAGGATGCCGGTGTCATTGC+TGG | 0.366360 | 4.2:-3949372 | MS.gene06117:CDS |
TCACAGGTCCCATTGTCTTC+CGG | 0.366501 | 4.2:+3948801 | None:intergenic |
CTTCTCACCATCATCTCCTT+AGG | 0.367766 | 4.2:-3950791 | MS.gene06117:intron |
CCAAGTTAGGGACTGTTATT+GGG | 0.369182 | 4.2:-3950048 | MS.gene06117:CDS |
CTTGTCTTTGATCTTGGAGG+TGG | 0.371703 | 4.2:-3949264 | MS.gene06117:CDS |
CCTTCCCCTGATGCACCACC+TGG | 0.374305 | 4.2:+3947541 | None:intergenic |
TGGCTCGCTCTTCTTCTTGC+GGG | 0.374938 | 4.2:-3950823 | MS.gene06117:CDS |
ACTGTTATTGGGATAGATCT+TGG | 0.377061 | 4.2:-3950037 | MS.gene06117:CDS |
ACTCTTCTTTCTCAACAGTT+TGG | 0.379400 | 4.2:+3947641 | None:intergenic |
CCATTCAAGTGCTTCTTTCA+CGG | 0.386836 | 4.2:+3947675 | None:intergenic |
ACAAAGGATTGCCGTCTTCT+CGG | 0.387262 | 4.2:-3948148 | MS.gene06117:CDS |
CTTCACTTTCTTGTCTTCCT+CGG | 0.392206 | 4.2:+3947819 | None:intergenic |
CCAAAGGCAACTGCTTCATC+AGG | 0.398543 | 4.2:+3948638 | None:intergenic |
TTTACTCTGACCTGAATGTA+TGG | 0.402451 | 4.2:+3949649 | None:intergenic |
ATTCTTGTCTTTGATCTTGG+AGG | 0.402766 | 4.2:-3949267 | MS.gene06117:CDS |
TTTCTTCAGATTTGAGGATA+AGG | 0.403180 | 4.2:-3949728 | MS.gene06117:intron |
CATCAAAGATGGTCCTTTCA+GGG | 0.407212 | 4.2:+3949864 | None:intergenic |
AGTTGAACAATGACTTGTTC+CGG | 0.409326 | 4.2:-3948820 | MS.gene06117:CDS |
CAAAGGATTGCCGTCTTCTC+GGG | 0.410284 | 4.2:-3948147 | MS.gene06117:CDS |
TGGGGAGGCTGCGAAGAATC+TGG | 0.418293 | 4.2:-3949897 | MS.gene06117:CDS |
GATCACCATTACAAATGAAA+AGG | 0.423968 | 4.2:-3947896 | MS.gene06117:CDS |
GTATCCAGATATCCTTCTCT+TGG | 0.424894 | 4.2:-3948450 | MS.gene06117:intron |
GGTAAACAGCAGTGATAATT+GGG | 0.429598 | 4.2:+3947581 | None:intergenic |
ATCATGGCACTGACTTCCTC+AGG | 0.433544 | 4.2:+3949601 | None:intergenic |
ATTGATGAGATTGTTCTTGT+TGG | 0.434577 | 4.2:-3948740 | MS.gene06117:CDS |
CTGGCTACTAAGAGCTCTCT+TGG | 0.435105 | 4.2:+3948922 | None:intergenic |
CCCAATAACAGTCCCTAACT+TGG | 0.435276 | 4.2:+3950048 | None:intergenic |
GATGTTGCACCTCTTACCCT+TGG | 0.436670 | 4.2:-3948428 | MS.gene06117:CDS |
TATTATGAATAGGTGTTTGA+AGG | 0.440657 | 4.2:-3948184 | MS.gene06117:intron |
CTTCATCTTAGTCAGAATCA+TGG | 0.442913 | 4.2:+3949585 | None:intergenic |
AAACAGTTGTTTGCTGATCC+TGG | 0.445328 | 4.2:+3948318 | None:intergenic |
TGCAACATCTGCTGCAAAAG+AGG | 0.446763 | 4.2:-3950080 | MS.gene06117:CDS |
CAAGTTGGAATCAGATGAAA+AGG | 0.446989 | 4.2:-3947713 | MS.gene06117:CDS |
CAAAGGTCACTTCAATTTGA+GGG | 0.447858 | 4.2:+3947983 | None:intergenic |
GGACTTTGATCAGAGAATAA+TGG | 0.449888 | 4.2:-3949038 | MS.gene06117:CDS |
TCAAAGGTCACTTCAATTTG+AGG | 0.450757 | 4.2:+3947982 | None:intergenic |
CAGAGGTCAGGTGGAGCTCC+AGG | 0.453414 | 4.2:-3947559 | MS.gene06117:CDS |
CCTGATGAAGCAGTTGCCTT+TGG | 0.453901 | 4.2:-3948638 | MS.gene06117:CDS |
AGCAATGACACCGGCATCCT+TGG | 0.458285 | 4.2:+3949374 | None:intergenic |
CCGACGATGAGAGATTGATT+GGG | 0.463196 | 4.2:-3949916 | MS.gene06117:CDS |
GACTTGTTCCGGAAGACAAT+GGG | 0.468406 | 4.2:-3948809 | MS.gene06117:CDS |
GTTTCAATTCCAAGGGTAAG+AGG | 0.470308 | 4.2:+3948419 | None:intergenic |
GGATGGAAAACCATACATTC+AGG | 0.477959 | 4.2:-3949659 | MS.gene06117:CDS |
TCGTCCATTGCCTTCTTCAC+AGG | 0.478204 | 4.2:+3948785 | None:intergenic |
TGAAAAGGGACGCCTGAGCC+AGG | 0.478721 | 4.2:-3947881 | MS.gene06117:CDS |
GGTCAATTTCCTCCTGGCTC+AGG | 0.479380 | 4.2:+3947869 | None:intergenic |
TTTGAGGTTCTTTCTACAAA+CGG | 0.480420 | 4.2:-3949201 | MS.gene06117:CDS |
CTCCAACAGTTTCAATTCCA+AGG | 0.480598 | 4.2:+3948411 | None:intergenic |
TCCTTGTTGACAATCTTGTA+AGG | 0.485086 | 4.2:+3949679 | None:intergenic |
ATGGCTCGCTCTTCTTCTTG+CGG | 0.485978 | 4.2:-3950824 | MS.gene06117:CDS |
TTTCCACACGGACTTGGTGC+TGG | 0.487623 | 4.2:+3948903 | None:intergenic |
TGCTGCCATTGCTTATGGAT+TGG | 0.489882 | 4.2:-3949313 | MS.gene06117:CDS |
GATGCCGTGGTCACTGTCCC+AGG | 0.494172 | 4.2:-3949526 | MS.gene06117:intron |
GTCTTCCTCGGCAAACTCCT+CGG | 0.495002 | 4.2:+3947831 | None:intergenic |
CCTGGTAGGTGGTAAACACC+TGG | 0.496443 | 4.2:+3948336 | None:intergenic |
AATGACACCGGCATCCTTGG+TGG | 0.499327 | 4.2:+3949377 | None:intergenic |
ATCACCATTACAAATGAAAA+GGG | 0.502193 | 4.2:-3947895 | MS.gene06117:CDS |
ACTCAATTTCCACACGGACT+TGG | 0.504632 | 4.2:+3948897 | None:intergenic |
CTGGAGCTCCACCTGACCTC+TGG | 0.505070 | 4.2:+3947560 | None:intergenic |
CTTCAATGATGCTCAGAGGC+AGG | 0.507132 | 4.2:-3949400 | MS.gene06117:CDS |
GACAATGGGACCTGTGAAGA+AGG | 0.509040 | 4.2:-3948795 | MS.gene06117:CDS |
AGTGATAATTGGGTTGCAAA+CGG | 0.511011 | 4.2:+3947591 | None:intergenic |
ACCCTTGGAATTGAAACTGT+TGG | 0.511117 | 4.2:-3948413 | MS.gene06117:CDS |
GAAAGAAGCACTTGAATGGC+TGG | 0.513283 | 4.2:-3947671 | MS.gene06117:CDS |
GCTTATGGATTGGACAAGAA+AGG | 0.514548 | 4.2:-3949303 | MS.gene06117:CDS |
CATGATTCTGACTAAGATGA+AGG | 0.516191 | 4.2:-3949584 | MS.gene06117:CDS |
TCCTTGCACTGCAGCACCAA+AGG | 0.516370 | 4.2:+3948622 | None:intergenic |
AAACGGTATTCTAAATGTTA+GGG | 0.516624 | 4.2:-3947950 | MS.gene06117:CDS |
GAGCTCCAGGTGGTGCATCA+GGG | 0.517615 | 4.2:-3947546 | MS.gene06117:CDS |
CCATCCGGTCAATTTCCTCC+TGG | 0.517789 | 4.2:+3947863 | None:intergenic |
TCAAATCGAGCACGGGTAAG+TGG | 0.518725 | 4.2:+3948845 | None:intergenic |
AAGAAGGCAATGGACGATGC+TGG | 0.518963 | 4.2:-3948779 | MS.gene06117:CDS |
GAAGGATTACTTTGATGGAA+AGG | 0.521373 | 4.2:-3948681 | MS.gene06117:CDS |
GATACGATTTCCTTGGTCGT+TGG | 0.522054 | 4.2:+3949961 | None:intergenic |
GGACAAACTTGCTGACAAGT+TGG | 0.525676 | 4.2:-3947728 | MS.gene06117:CDS |
AAAACAAACCTTGGAGCTGG+TGG | 0.525948 | 4.2:+3948103 | None:intergenic |
TACAAGATTGTCAACAAGGA+TGG | 0.525974 | 4.2:-3949676 | MS.gene06117:CDS |
AGGAAGGGACCACCAAGTTA+GGG | 0.527633 | 4.2:-3950060 | MS.gene06117:CDS |
AGCAAGGACAACAGAGCACT+TGG | 0.529505 | 4.2:-3948971 | MS.gene06117:CDS |
ATAAGCAATGGCAGCAGCGG+TGG | 0.530847 | 4.2:+3949320 | None:intergenic |
TGATGGAAAGGAACCAAACA+AGG | 0.531735 | 4.2:-3948669 | MS.gene06117:CDS |
ACTGCTGTTTACCAGAGGTC+AGG | 0.531930 | 4.2:-3947571 | MS.gene06117:CDS |
ATAATTACCTAAGGAGATGA+TGG | 0.532489 | 4.2:+3950784 | None:intergenic |
ACCGTTTGCATCTACTTCAA+AGG | 0.532713 | 4.2:+3947966 | None:intergenic |
GAAATCGTATCACACCATCA+TGG | 0.533173 | 4.2:-3949949 | MS.gene06117:CDS |
AGGCAGGCCACCAAGGATGC+CGG | 0.534449 | 4.2:-3949384 | MS.gene06117:CDS |
AATAGGTGTTTGAAGGTGAG+AGG | 0.535211 | 4.2:-3948177 | MS.gene06117:intron |
CCTCGGCTTCACGAACCATC+CGG | 0.536252 | 4.2:+3947848 | None:intergenic |
GATGAGATTGTTCTTGTTGG+TGG | 0.537949 | 4.2:-3948737 | MS.gene06117:CDS |
AAATCGTATCACACCATCAT+GGG | 0.540268 | 4.2:-3949948 | MS.gene06117:CDS |
CCGTGAAAGAAGCACTTGAA+TGG | 0.543546 | 4.2:-3947675 | MS.gene06117:CDS |
TGGCAGCTGTCAACCCTGAA+AGG | 0.545326 | 4.2:-3949877 | MS.gene06117:CDS |
ACAAACGGAGATACCCATCT+TGG | 0.546553 | 4.2:-3949186 | MS.gene06117:CDS |
TGTGTTGGTGTTTACAAGAA+CGG | 0.547276 | 4.2:-3950001 | MS.gene06117:CDS |
AAATGTTAGGGCAGAAGACA+AGG | 0.547526 | 4.2:-3947938 | MS.gene06117:CDS |
GAGCACTTGGAAAGCTGAGG+AGG | 0.547900 | 4.2:-3948958 | MS.gene06117:CDS |
CTTGGAATTGAAACTGTTGG+AGG | 0.549933 | 4.2:-3948410 | MS.gene06117:CDS |
GAAACCGCTGAAGCATTCCT+TGG | 0.551326 | 4.2:-3949562 | MS.gene06117:CDS |
AAGTCTCTTGACATCAAAGA+TGG | 0.553461 | 4.2:+3949853 | None:intergenic |
ATAAGTACTCACCTCCAAGA+TGG | 0.554153 | 4.2:+3949172 | None:intergenic |
GCCTTTGGTGCTGCAGTGCA+AGG | 0.554487 | 4.2:-3948623 | MS.gene06117:CDS |
CACAAAACAAACCTTGGAGC+TGG | 0.555992 | 4.2:+3948100 | None:intergenic |
AGCTCCAGGTGGTGCATCAG+GGG | 0.556960 | 4.2:-3947545 | MS.gene06117:CDS |
ATACATTCAGGTCAGAGTAA+AGG | 0.559988 | 4.2:-3949647 | MS.gene06117:CDS |
ACCTTTGAAGTAGATGCAAA+CGG | 0.560638 | 4.2:-3947967 | MS.gene06117:CDS |
CCAGGTGGTGCATCAGGGGA+AGG | 0.561188 | 4.2:-3947541 | MS.gene06117:CDS |
TGCTCAGAGGCAGGCCACCA+AGG | 0.561411 | 4.2:-3949391 | MS.gene06117:CDS |
CCAGGTGTTTACCACCTACC+AGG | 0.561692 | 4.2:-3948336 | MS.gene06117:CDS |
TTCCTCAGGGCTGAACACCT+TGG | 0.565203 | 4.2:+3949615 | None:intergenic |
CTGGAATCCCACCAGCTCCA+AGG | 0.566039 | 4.2:-3948111 | MS.gene06117:intron |
ACATCTGCTGCAAAAGAGGA+AGG | 0.567823 | 4.2:-3950076 | MS.gene06117:CDS |
CCCAATCAATCTCTCATCGT+CGG | 0.570425 | 4.2:+3949916 | None:intergenic |
TAAGTACTCACCTCCAAGAT+GGG | 0.574552 | 4.2:+3949173 | None:intergenic |
TGGTGCATCAGGGGAAGGAG+AGG | 0.575558 | 4.2:-3947536 | MS.gene06117:CDS |
TCCAACAGTTTCAATTCCAA+GGG | 0.575984 | 4.2:+3948412 | None:intergenic |
TGACTTGTTCCGGAAGACAA+TGG | 0.576660 | 4.2:-3948810 | MS.gene06117:CDS |
TCCTTACAAGATTGTCAACA+AGG | 0.577546 | 4.2:-3949680 | MS.gene06117:CDS |
AATAACAGTCCCTAACTTGG+TGG | 0.577985 | 4.2:+3950051 | None:intergenic |
AATCAAAGTTCCCGAGAAGA+CGG | 0.581537 | 4.2:+3948137 | None:intergenic |
AACGGAGATACCCATCTTGG+AGG | 0.583876 | 4.2:-3949183 | MS.gene06117:intron |
TCCATAAGCAATGGCAGCAG+CGG | 0.585512 | 4.2:+3949317 | None:intergenic |
CTTGTCCAATCCATAAGCAA+TGG | 0.592089 | 4.2:+3949308 | None:intergenic |
CAACTCTTCAAATCGAGCAC+GGG | 0.593000 | 4.2:+3948838 | None:intergenic |
TGAAGGAAAGAATTGATGCT+CGG | 0.593052 | 4.2:-3947801 | MS.gene06117:CDS |
CCAGGAGGAAATTGACCGGA+TGG | 0.593074 | 4.2:-3947863 | MS.gene06117:CDS |
TCAACTCTTCAAATCGAGCA+CGG | 0.593848 | 4.2:+3948837 | None:intergenic |
AGGGCAGAAGACAAGGGCAC+AGG | 0.595427 | 4.2:-3947931 | MS.gene06117:CDS |
GGAACAACATATTCATGTGT+TGG | 0.597629 | 4.2:-3950016 | MS.gene06117:CDS |
ATGGTGTGATACGATTTCCT+TGG | 0.600611 | 4.2:+3949954 | None:intergenic |
GCTGTTTACCAGAGGTCAGG+TGG | 0.602705 | 4.2:-3947568 | MS.gene06117:CDS |
CCGGATGGTTCGTGAAGCCG+AGG | 0.603140 | 4.2:-3947848 | MS.gene06117:CDS |
TGAGCCAGGAGGAAATTGAC+CGG | 0.604755 | 4.2:-3947867 | MS.gene06117:CDS |
AAAGGTCACTTCAATTTGAG+GGG | 0.605663 | 4.2:+3947984 | None:intergenic |
GAGGTGCAACATCCAAGAGA+AGG | 0.607551 | 4.2:+3948438 | None:intergenic |
TAAGCAATGGCAGCAGCGGT+GGG | 0.609672 | 4.2:+3949321 | None:intergenic |
AGCACTTGGAAAGCTGAGGA+GGG | 0.611229 | 4.2:-3948957 | MS.gene06117:CDS |
CGATGAGAGATTGATTGGGG+AGG | 0.612921 | 4.2:-3949912 | MS.gene06117:CDS |
CTTGCCAAGGAATGCTTCAG+CGG | 0.613919 | 4.2:+3949558 | None:intergenic |
CGAGGAAGACAAGAAAGTGA+AGG | 0.622597 | 4.2:-3947818 | MS.gene06117:CDS |
GCATAGCAAGGATATTAGCA+AGG | 0.623368 | 4.2:-3948987 | MS.gene06117:CDS |
CGACGATGAGAGATTGATTG+GGG | 0.628193 | 4.2:-3949915 | MS.gene06117:CDS |
TGTTTGCTGATCCTGGTAGG+TGG | 0.630248 | 4.2:+3948325 | None:intergenic |
CAAGACTATTCGTGATGCCG+TGG | 0.630982 | 4.2:-3949539 | MS.gene06117:CDS |
GAAATCATAGCCAACGACCA+AGG | 0.633608 | 4.2:-3949971 | MS.gene06117:CDS |
CTGGTAGGTGGTAAACACCT+GGG | 0.633786 | 4.2:+3948337 | None:intergenic |
AGGTCAGGTGGAGCTCCAGG+TGG | 0.634814 | 4.2:-3947556 | MS.gene06117:CDS |
TTCTTGTTGGTGGAAGCACA+AGG | 0.637706 | 4.2:-3948727 | MS.gene06117:CDS |
AAACAAACCTTGGAGCTGGT+GGG | 0.639146 | 4.2:+3948104 | None:intergenic |
GGGACCTGTGAAGAAGGCAA+TGG | 0.639949 | 4.2:-3948789 | MS.gene06117:CDS |
TTCACCTGGGACAGTGACCA+CGG | 0.640825 | 4.2:+3949522 | None:intergenic |
AGTTGTTTGCTGATCCTGGT+AGG | 0.644960 | 4.2:+3948322 | None:intergenic |
TGAAGCCGAGGAGTTTGCCG+AGG | 0.647044 | 4.2:-3947836 | MS.gene06117:CDS |
TATGGATTGGACAAGAAAGG+TGG | 0.647597 | 4.2:-3949300 | MS.gene06117:CDS |
CAAAGGCAACTGCTTCATCA+GGG | 0.652946 | 4.2:+3948639 | None:intergenic |
GATGGAAAGGAACCAAACAA+GGG | 0.654365 | 4.2:-3948668 | MS.gene06117:CDS |
AGTAAAGGATGGTGAGACCA+AGG | 0.655359 | 4.2:-3949632 | MS.gene06117:CDS |
TGTCATTGCTGGTTTGAACG+TGG | 0.655475 | 4.2:-3949361 | MS.gene06117:CDS |
TTATCACTGCTGTTTACCAG+AGG | 0.655496 | 4.2:-3947576 | MS.gene06117:CDS |
CATCTGCTGCAAAAGAGGAA+GGG | 0.658549 | 4.2:-3950075 | MS.gene06117:CDS |
ATGGAAAGGAACCAAACAAG+GGG | 0.659203 | 4.2:-3948667 | MS.gene06117:CDS |
ATTCAGGTCAGAGTAAAGGA+TGG | 0.659644 | 4.2:-3949643 | MS.gene06117:CDS |
TCATGGCACTGACTTCCTCA+GGG | 0.661707 | 4.2:+3949602 | None:intergenic |
GCAAGAAGAAGAGCGAGCCA+TGG | 0.662253 | 4.2:+3950826 | None:intergenic |
ACAGAGCACTTGGAAAGCTG+AGG | 0.662613 | 4.2:-3948961 | MS.gene06117:CDS |
GTTCAAACCAGCAATGACAC+CGG | 0.667444 | 4.2:+3949365 | None:intergenic |
TCGGTGAAAGAAACCCATGA+TGG | 0.669628 | 4.2:+3949935 | None:intergenic |
CATCACGAATAGTCTTGCCA+AGG | 0.671739 | 4.2:+3949545 | None:intergenic |
GACCAAGGTGTTCAGCCCTG+AGG | 0.674395 | 4.2:-3949617 | MS.gene06117:CDS |
TAGCCAGCACCAAGTCCGTG+TGG | 0.679452 | 4.2:-3948906 | MS.gene06117:CDS |
TGGAAGCACAAGGATTCCAA+AGG | 0.684118 | 4.2:-3948717 | MS.gene06117:CDS |
AATGTTAGGGCAGAAGACAA+GGG | 0.691069 | 4.2:-3947937 | MS.gene06117:CDS |
AGGTGAGAGGAGTCTCACAA+AGG | 0.713013 | 4.2:-3948164 | MS.gene06117:CDS |
AAAGGGACGCCTGAGCCAGG+AGG | 0.717721 | 4.2:-3947878 | MS.gene06117:CDS |
CTTACTTCAATGATGCTCAG+AGG | 0.721672 | 4.2:-3949404 | MS.gene06117:CDS |
AGTATCTTGACAATTGACAA+TGG | 0.727159 | 4.2:-3949228 | MS.gene06117:CDS |
GAGGGTGGTGAAGAAACCAA+AGG | 0.727490 | 4.2:-3948584 | MS.gene06117:intron |
AAAGTGACTCAATTTCCACA+CGG | 0.743191 | 4.2:+3948891 | None:intergenic |
TGGAAAGGAACCAAACAAGG+GGG | 0.770257 | 4.2:-3948666 | MS.gene06117:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAACTCAAAACATTTAAAT+CGG | + | chr4.2:3948186-3948205 | None:intergenic | 15.0% |
!! | AACATAAATCAACTATTTAA+AGG | + | chr4.2:3948113-3948132 | None:intergenic | 15.0% |
!! | ATTAATTAACAGTCTTTAAA+AGG | + | chr4.2:3947869-3947888 | None:intergenic | 15.0% |
!! | TTGTTATAATTTGATGTAAT+GGG | - | chr4.2:3948554-3948573 | MS.gene06117:intron | 15.0% |
!!! | TTTGTTATAATTTGATGTAA+TGG | - | chr4.2:3948553-3948572 | MS.gene06117:intron | 15.0% |
!! | AAATACAATATTGTGTAATG+AGG | - | chr4.2:3950088-3950107 | MS.gene06117:CDS | 20.0% |
!! | AACAAATAAAAAGGTCTAAT+TGG | + | chr4.2:3947932-3947951 | None:intergenic | 20.0% |
!! | AATACAATATTGTGTAATGA+GGG | - | chr4.2:3950089-3950108 | MS.gene06117:CDS | 20.0% |
!! | AGATATGTAATAATTACCTA+AGG | + | chr4.2:3947556-3947575 | None:intergenic | 20.0% |
!! | ATGTTAAAATGAAGACAAAA+TGG | + | chr4.2:3948879-3948898 | None:intergenic | 20.0% |
!! | ATTACAAATAGAACCTTAAA+CGG | + | chr4.2:3948086-3948105 | None:intergenic | 20.0% |
!! | GATAATCCAAACAAATAAAA+AGG | + | chr4.2:3947941-3947960 | None:intergenic | 20.0% |
!! | TACACAATATTGTATTTAGA+AGG | + | chr4.2:3950085-3950104 | None:intergenic | 20.0% |
!! | TGTTAAAATGAAGACAAAAT+GGG | + | chr4.2:3948878-3948897 | None:intergenic | 20.0% |
!!! | ATTAGACCTTTTTATTTGTT+TGG | - | chr4.2:3947932-3947951 | MS.gene06117:CDS | 20.0% |
!!! | GTTTTAGATCTTTGATTTTA+TGG | - | chr4.2:3947637-3947656 | MS.gene06117:CDS | 20.0% |
!!! | TAGTTGATTTATGTTGTTTT+CGG | - | chr4.2:3948118-3948137 | MS.gene06117:CDS | 20.0% |
!!! | TGATTAATCAATTTTTCTTG+TGG | - | chr4.2:3950305-3950324 | MS.gene06117:intron | 20.0% |
!!! | TGTCTGTTTTTATTATGAAT+AGG | - | chr4.2:3950134-3950153 | MS.gene06117:intron | 20.0% |
!!! | TTACTAGTGATTTATTTTAC+TGG | - | chr4.2:3947998-3948017 | MS.gene06117:intron | 20.0% |
!!! | TTGTTTTGTTTTGAATTTTG+TGG | - | chr4.2:3947807-3947826 | MS.gene06117:CDS | 20.0% |
! | AAACGGTATTCTAAATGTTA+GGG | - | chr4.2:3950378-3950397 | MS.gene06117:intron | 25.0% |
! | ACAAAAGCAATGAGAAAAAA+AGG | + | chr4.2:3947616-3947635 | None:intergenic | 25.0% |
! | AGATGAAAAGGAAAAAATTG+AGG | - | chr4.2:3950627-3950646 | MS.gene06117:intron | 25.0% |
! | ATACAATATTGTGTAATGAG+GGG | - | chr4.2:3950090-3950109 | MS.gene06117:CDS | 25.0% |
! | ATCACCATTACAAATGAAAA+GGG | - | chr4.2:3950433-3950452 | MS.gene06117:intron | 25.0% |
! | GTTAAAATGAAGACAAAATG+GGG | + | chr4.2:3948877-3948896 | None:intergenic | 25.0% |
! | TATTATGAATAGGTGTTTGA+AGG | - | chr4.2:3950144-3950163 | MS.gene06117:intron | 25.0% |
! | TTACAAATAGAACCTTAAAC+GGG | + | chr4.2:3948085-3948104 | None:intergenic | 25.0% |
!!! | AGTTGATTTATGTTGTTTTC+GGG | - | chr4.2:3948119-3948138 | MS.gene06117:CDS | 25.0% |
!!! | TATTTGTTATTGATGCAAGT+AGG | - | chr4.2:3949815-3949834 | MS.gene06117:intron | 25.0% |
!!! | TGTCTTCATTTTAACATTTC+TGG | - | chr4.2:3948882-3948901 | MS.gene06117:CDS | 25.0% |
!!! | TTTATTTTACTGGCTTCAAA+TGG | - | chr4.2:3948008-3948027 | MS.gene06117:intron | 25.0% |
AACATTCTTGTCTTTGATCT+TGG | - | chr4.2:3949058-3949077 | MS.gene06117:intron | 30.0% | |
AACGGGAAAAAACATGATTA+TGG | + | chr4.2:3948068-3948087 | None:intergenic | 30.0% | |
AATTAGAATGTGATGCAAGT+AGG | + | chr4.2:3947687-3947706 | None:intergenic | 30.0% | |
AGTATCTTGACAATTGACAA+TGG | - | chr4.2:3949100-3949119 | MS.gene06117:intron | 30.0% | |
ATAATTACCTAAGGAGATGA+TGG | + | chr4.2:3947547-3947566 | None:intergenic | 30.0% | |
ATAGACTATAATGGTACCTT+TGG | + | chr4.2:3949763-3949782 | None:intergenic | 30.0% | |
ATTAGAATGTGATGCAAGTA+GGG | + | chr4.2:3947686-3947705 | None:intergenic | 30.0% | |
ATTGATGAGATTGTTCTTGT+TGG | - | chr4.2:3949588-3949607 | MS.gene06117:CDS | 30.0% | |
CAAACGGTATTCTAAATGTT+AGG | - | chr4.2:3950377-3950396 | MS.gene06117:intron | 30.0% | |
CTTCTATGAACTTTCTCTAT+TGG | - | chr4.2:3950263-3950282 | MS.gene06117:intron | 30.0% | |
GATCACCATTACAAATGAAA+AGG | - | chr4.2:3950432-3950451 | MS.gene06117:intron | 30.0% | |
TAACTCTTCAATTGTTTACC+AGG | - | chr4.2:3949264-3949283 | MS.gene06117:CDS | 30.0% | |
TAATTAATACAATTACGCGC+CGG | - | chr4.2:3947881-3947900 | MS.gene06117:CDS | 30.0% | |
TGATATCACAAAACAAACCT+TGG | + | chr4.2:3950237-3950256 | None:intergenic | 30.0% | |
TTCAAAAGTTGTTGTACCTT+TGG | + | chr4.2:3949630-3949649 | None:intergenic | 30.0% | |
TTGTCGTTATAATATTGCGA+TGG | - | chr4.2:3948205-3948224 | MS.gene06117:intron | 30.0% | |
TTTCTTCAGATTTGAGGATA+AGG | - | chr4.2:3948600-3948619 | MS.gene06117:CDS | 30.0% | |
TTTGATGTCAAGAGACTTAT+CGG | - | chr4.2:3948480-3948499 | MS.gene06117:intron | 30.0% | |
! | GTTTTTCATGTTGTAGACAT+AGG | + | chr4.2:3950566-3950585 | None:intergenic | 30.0% |
! | TTTGAGGTTCTTTCTACAAA+CGG | - | chr4.2:3949127-3949146 | MS.gene06117:intron | 30.0% |
! | TTTTATGGGATGTGATTACA+TGG | - | chr4.2:3948148-3948167 | MS.gene06117:CDS | 30.0% |
!! | AAAGGTACAACAACTTTTGA+AGG | - | chr4.2:3949629-3949648 | MS.gene06117:CDS | 30.0% |
!! | AATTGACAATGGTGTTTTTG+AGG | - | chr4.2:3949111-3949130 | MS.gene06117:intron | 30.0% |
!! | CTTCTAAGATTCAAAGAAAC+CGG | + | chr4.2:3947903-3947922 | None:intergenic | 30.0% |
!! | CTTTTGAAGGATTACTTTGA+TGG | - | chr4.2:3949642-3949661 | MS.gene06117:CDS | 30.0% |
!!! | ATCATGTTTTTTCCCGTTTA+AGG | - | chr4.2:3948070-3948089 | MS.gene06117:intron | 30.0% |
!!! | GAAATTGAGTCACTTTTTGA+TGG | - | chr4.2:3949444-3949463 | MS.gene06117:intron | 30.0% |
!!! | TTTTCGGGTAATGCTTTTAT+GGG | - | chr4.2:3948134-3948153 | MS.gene06117:CDS | 30.0% |
AAAGGTCACTTCAATTTGAG+GGG | + | chr4.2:3950347-3950366 | None:intergenic | 35.0% | |
AAAGTGACTCAATTTCCACA+CGG | + | chr4.2:3949440-3949459 | None:intergenic | 35.0% | |
AAATCGTATCACACCATCAT+GGG | - | chr4.2:3948380-3948399 | MS.gene06117:CDS | 35.0% | |
AAGTCTCTTGACATCAAAGA+TGG | + | chr4.2:3948478-3948497 | None:intergenic | 35.0% | |
AATAAAAACAGACAACACCC+CGG | + | chr4.2:3950128-3950147 | None:intergenic | 35.0% | |
ACAATTGAAGAGTTAGCACT+TGG | + | chr4.2:3949259-3949278 | None:intergenic | 35.0% | |
ACTCTTCTTTCTCAACAGTT+TGG | + | chr4.2:3950690-3950709 | None:intergenic | 35.0% | |
ACTGTTATTGGGATAGATCT+TGG | - | chr4.2:3948291-3948310 | MS.gene06117:intron | 35.0% | |
AGCAATATGCAGTGGAATAA+TGG | + | chr4.2:3950052-3950071 | None:intergenic | 35.0% | |
AGCTACCTAATGCAATTGAA+AGG | + | chr4.2:3949793-3949812 | None:intergenic | 35.0% | |
ATACATTCAGGTCAGAGTAA+AGG | - | chr4.2:3948681-3948700 | MS.gene06117:CDS | 35.0% | |
ATATTGCGATGGTTTATTGC+AGG | - | chr4.2:3948216-3948235 | MS.gene06117:intron | 35.0% | |
ATTCTTGTCTTTGATCTTGG+AGG | - | chr4.2:3949061-3949080 | MS.gene06117:intron | 35.0% | |
CAAAGGTCACTTCAATTTGA+GGG | + | chr4.2:3950348-3950367 | None:intergenic | 35.0% | |
CATGATTCTGACTAAGATGA+AGG | - | chr4.2:3948744-3948763 | MS.gene06117:CDS | 35.0% | |
CTTCATCTTAGTCAGAATCA+TGG | + | chr4.2:3948746-3948765 | None:intergenic | 35.0% | |
GAAAAACCAAATCAGTGACA+AGG | - | chr4.2:3950579-3950598 | MS.gene06117:intron | 35.0% | |
GAAAGTAACCAAATTGCATG+AGG | + | chr4.2:3948852-3948871 | None:intergenic | 35.0% | |
GAAGGATTACTTTGATGGAA+AGG | - | chr4.2:3949647-3949666 | MS.gene06117:CDS | 35.0% | |
GGAACAACATATTCATGTGT+TGG | - | chr4.2:3948312-3948331 | MS.gene06117:CDS | 35.0% | |
GGACTTTGATCAGAGAATAA+TGG | - | chr4.2:3949290-3949309 | MS.gene06117:CDS | 35.0% | |
GGCTAGAGTATAGACTATAA+TGG | + | chr4.2:3949772-3949791 | None:intergenic | 35.0% | |
GGTAAACAGCAGTGATAATT+GGG | + | chr4.2:3950750-3950769 | None:intergenic | 35.0% | |
TACAAGATTGTCAACAAGGA+TGG | - | chr4.2:3948652-3948671 | MS.gene06117:CDS | 35.0% | |
TCAAAGGTCACTTCAATTTG+AGG | + | chr4.2:3950349-3950368 | None:intergenic | 35.0% | |
TCCAACAGTTTCAATTCCAA+GGG | + | chr4.2:3949919-3949938 | None:intergenic | 35.0% | |
TCCTTACAAGATTGTCAACA+AGG | - | chr4.2:3948648-3948667 | MS.gene06117:CDS | 35.0% | |
TCCTTGTTGACAATCTTGTA+AGG | + | chr4.2:3948652-3948671 | None:intergenic | 35.0% | |
TGAAGGAAAGAATTGATGCT+CGG | - | chr4.2:3950527-3950546 | MS.gene06117:intron | 35.0% | |
TGCTTCTTTCTTCAGATTTG+AGG | - | chr4.2:3948594-3948613 | MS.gene06117:CDS | 35.0% | |
TGGTAAACAGCAGTGATAAT+TGG | + | chr4.2:3950751-3950770 | None:intergenic | 35.0% | |
TGTAATTCACCAATTCACCT+GGG | + | chr4.2:3948822-3948841 | None:intergenic | 35.0% | |
TTATTCCACTGCATATTGCT+AGG | - | chr4.2:3950052-3950071 | MS.gene06117:CDS | 35.0% | |
TTCTTGTGGTAATTGAACAG+AGG | - | chr4.2:3950319-3950338 | MS.gene06117:intron | 35.0% | |
TTGTAATTCACCAATTCACC+TGG | + | chr4.2:3948823-3948842 | None:intergenic | 35.0% | |
TTTACTCTGACCTGAATGTA+TGG | + | chr4.2:3948682-3948701 | None:intergenic | 35.0% | |
! | AACTTGTTCCTCATGCAATT+TGG | - | chr4.2:3948841-3948860 | MS.gene06117:CDS | 35.0% |
! | AGTGATAATTGGGTTGCAAA+CGG | + | chr4.2:3950740-3950759 | None:intergenic | 35.0% |
! | CAAGTTGGAATCAGATGAAA+AGG | - | chr4.2:3950615-3950634 | MS.gene06117:intron | 35.0% |
! | CAATGAGAGAGTGTAATACT+AGG | + | chr4.2:3949844-3949863 | None:intergenic | 35.0% |
! | GATCAAGAAAAAGCATAGCA+AGG | - | chr4.2:3949329-3949348 | MS.gene06117:CDS | 35.0% |
! | TCTAGCCTTTCAATTGCATT+AGG | - | chr4.2:3949785-3949804 | MS.gene06117:intron | 35.0% |
! | TGTGTTGGTGTTTACAAGAA+CGG | - | chr4.2:3948327-3948346 | MS.gene06117:CDS | 35.0% |
!! | ACCTTTGAAGTAGATGCAAA+CGG | - | chr4.2:3950361-3950380 | MS.gene06117:intron | 35.0% |
!! | AGTTGAACAATGACTTGTTC+CGG | - | chr4.2:3949508-3949527 | MS.gene06117:intron | 35.0% |
!! | GCAAACAACTGTTTCTATTC+AGG | - | chr4.2:3950019-3950038 | MS.gene06117:CDS | 35.0% |
!!! | GTTTTCGGGTAATGCTTTTA+TGG | - | chr4.2:3948133-3948152 | MS.gene06117:CDS | 35.0% |
AAATGTTAGGGCAGAAGACA+AGG | - | chr4.2:3950390-3950409 | MS.gene06117:intron | 40.0% | |
AATAACAGTCCCTAACTTGG+TGG | + | chr4.2:3948280-3948299 | None:intergenic | 40.0% | |
AATAGGTGTTTGAAGGTGAG+AGG | - | chr4.2:3950151-3950170 | MS.gene06117:intron | 40.0% | |
AATCAAAGTTCCCGAGAAGA+CGG | + | chr4.2:3950194-3950213 | None:intergenic | 40.0% | |
AATGTCCTAGCAATATGCAG+TGG | + | chr4.2:3950060-3950079 | None:intergenic | 40.0% | |
AATGTTAGGGCAGAAGACAA+GGG | - | chr4.2:3950391-3950410 | MS.gene06117:intron | 40.0% | |
ACATCAAAGATGGTCCTTTC+AGG | + | chr4.2:3948468-3948487 | None:intergenic | 40.0% | |
ACATCCAAGAGAAGGATATC+TGG | + | chr4.2:3949885-3949904 | None:intergenic | 40.0% | |
ACCAAGTTAGGGACTGTTAT+TGG | - | chr4.2:3948279-3948298 | MS.gene06117:intron | 40.0% | |
ACCCTTGGAATTGAAACTGT+TGG | - | chr4.2:3949915-3949934 | MS.gene06117:CDS | 40.0% | |
ACCGTTTGCATCTACTTCAA+AGG | + | chr4.2:3950365-3950384 | None:intergenic | 40.0% | |
ATAAGTACTCACCTCCAAGA+TGG | + | chr4.2:3949159-3949178 | None:intergenic | 40.0% | |
ATGGAAAGGAACCAAACAAG+GGG | - | chr4.2:3949661-3949680 | MS.gene06117:CDS | 40.0% | |
ATGGTGTGATACGATTTCCT+TGG | + | chr4.2:3948377-3948396 | None:intergenic | 40.0% | |
ATTCAGGTCAGAGTAAAGGA+TGG | - | chr4.2:3948685-3948704 | MS.gene06117:CDS | 40.0% | |
CATCAAAGATGGTCCTTTCA+GGG | + | chr4.2:3948467-3948486 | None:intergenic | 40.0% | |
CCAAGTTAGGGACTGTTATT+GGG | - | chr4.2:3948280-3948299 | MS.gene06117:intron | 40.0% | |
CCATTCAAGTGCTTCTTTCA+CGG | + | chr4.2:3950656-3950675 | None:intergenic | 40.0% | |
CTCCAACAGTTTCAATTCCA+AGG | + | chr4.2:3949920-3949939 | None:intergenic | 40.0% | |
CTTACTTCAATGATGCTCAG+AGG | - | chr4.2:3948924-3948943 | MS.gene06117:CDS | 40.0% | |
CTTCAATTGTTTACCAGGTG+AGG | - | chr4.2:3949269-3949288 | MS.gene06117:CDS | 40.0% | |
CTTCACTTTCTTGTCTTCCT+CGG | + | chr4.2:3950512-3950531 | None:intergenic | 40.0% | |
CTTGGAATTGAAACTGTTGG+AGG | - | chr4.2:3949918-3949937 | MS.gene06117:CDS | 40.0% | |
CTTGTCCAATCCATAAGCAA+TGG | + | chr4.2:3949023-3949042 | None:intergenic | 40.0% | |
GAAATCGTATCACACCATCA+TGG | - | chr4.2:3948379-3948398 | MS.gene06117:CDS | 40.0% | |
GATGAGATTGTTCTTGTTGG+TGG | - | chr4.2:3949591-3949610 | MS.gene06117:CDS | 40.0% | |
GATGGAAAGGAACCAAACAA+GGG | - | chr4.2:3949660-3949679 | MS.gene06117:CDS | 40.0% | |
GCATAGCAAGGATATTAGCA+AGG | - | chr4.2:3949341-3949360 | MS.gene06117:CDS | 40.0% | |
GGATGGAAAACCATACATTC+AGG | - | chr4.2:3948669-3948688 | MS.gene06117:CDS | 40.0% | |
GTATCCAGATATCCTTCTCT+TGG | - | chr4.2:3949878-3949897 | MS.gene06117:CDS | 40.0% | |
GTTTCAATTCCAAGGGTAAG+AGG | + | chr4.2:3949912-3949931 | None:intergenic | 40.0% | |
TAAGTACTCACCTCCAAGAT+GGG | + | chr4.2:3949158-3949177 | None:intergenic | 40.0% | |
TCAACTCTTCAAATCGAGCA+CGG | + | chr4.2:3949494-3949513 | None:intergenic | 40.0% | |
TGATGGAAAGGAACCAAACA+AGG | - | chr4.2:3949659-3949678 | MS.gene06117:CDS | 40.0% | |
TGGGATGTGATTACATGGTT+TGG | - | chr4.2:3948153-3948172 | MS.gene06117:CDS | 40.0% | |
! | AAACAGTTGTTTGCTGATCC+TGG | + | chr4.2:3950013-3950032 | None:intergenic | 40.0% |
! | GCGTCCCTTTTCATTTGTAA+TGG | + | chr4.2:3950440-3950459 | None:intergenic | 40.0% |
! | GTTTGTCCTTGTCACTGATT+TGG | + | chr4.2:3950588-3950607 | None:intergenic | 40.0% |
! | TTATCACTGCTGTTTACCAG+AGG | - | chr4.2:3950752-3950771 | MS.gene06117:intron | 40.0% |
!! | GCTTATGGATTGGACAAGAA+AGG | - | chr4.2:3949025-3949044 | MS.gene06117:CDS | 40.0% |
!! | TATGGATTGGACAAGAAAGG+TGG | - | chr4.2:3949028-3949047 | MS.gene06117:CDS | 40.0% |
!!! | AAACACCTGGGATTTTTTGG+TGG | + | chr4.2:3949982-3950001 | None:intergenic | 40.0% |
!!! | AACACCTGGGATTTTTTGGT+GGG | + | chr4.2:3949981-3950000 | None:intergenic | 40.0% |
!!! | GGTAAACACCTGGGATTTTT+TGG | + | chr4.2:3949985-3950004 | None:intergenic | 40.0% |
!!! | TGCAAGGAAGCATTTTGAGT+GGG | - | chr4.2:3949721-3949740 | MS.gene06117:CDS | 40.0% |
AAAACAAACCTTGGAGCTGG+TGG | + | chr4.2:3950228-3950247 | None:intergenic | 45.0% | |
AAACAAACCTTGGAGCTGGT+GGG | + | chr4.2:3950227-3950246 | None:intergenic | 45.0% | |
ACAAACGGAGATACCCATCT+TGG | - | chr4.2:3949142-3949161 | MS.gene06117:intron | 45.0% | |
ACAAAGGATTGCCGTCTTCT+CGG | - | chr4.2:3950180-3950199 | MS.gene06117:intron | 45.0% | |
ACATCTGCTGCAAAAGAGGA+AGG | - | chr4.2:3948252-3948271 | MS.gene06117:intron | 45.0% | |
ACCGACGATGAGAGATTGAT+TGG | - | chr4.2:3948411-3948430 | MS.gene06117:CDS | 45.0% | |
ACTCAATTTCCACACGGACT+TGG | + | chr4.2:3949434-3949453 | None:intergenic | 45.0% | |
AGTAAAGGATGGTGAGACCA+AGG | - | chr4.2:3948696-3948715 | MS.gene06117:CDS | 45.0% | |
CAAAGGCAACTGCTTCATCA+GGG | + | chr4.2:3949692-3949711 | None:intergenic | 45.0% | |
CAACTCTTCAAATCGAGCAC+GGG | + | chr4.2:3949493-3949512 | None:intergenic | 45.0% | |
CACAAAACAAACCTTGGAGC+TGG | + | chr4.2:3950231-3950250 | None:intergenic | 45.0% | |
CATCTGCTGCAAAAGAGGAA+GGG | - | chr4.2:3948253-3948272 | MS.gene06117:intron | 45.0% | |
CCCAATAACAGTCCCTAACT+TGG | + | chr4.2:3948283-3948302 | None:intergenic | 45.0% | |
CCCAATCAATCTCTCATCGT+CGG | + | chr4.2:3948415-3948434 | None:intergenic | 45.0% | |
CCGACGATGAGAGATTGATT+GGG | - | chr4.2:3948412-3948431 | MS.gene06117:CDS | 45.0% | |
CGACGATGAGAGATTGATTG+GGG | - | chr4.2:3948413-3948432 | MS.gene06117:CDS | 45.0% | |
CGAGGAAGACAAGAAAGTGA+AGG | - | chr4.2:3950510-3950529 | MS.gene06117:intron | 45.0% | |
CTTCTCACCATCATCTCCTT+AGG | - | chr4.2:3947537-3947556 | MS.gene06117:CDS | 45.0% | |
CTTGTCTTTGATCTTGGAGG+TGG | - | chr4.2:3949064-3949083 | MS.gene06117:intron | 45.0% | |
GAAATCATAGCCAACGACCA+AGG | - | chr4.2:3948357-3948376 | MS.gene06117:CDS | 45.0% | |
GATACGATTTCCTTGGTCGT+TGG | + | chr4.2:3948370-3948389 | None:intergenic | 45.0% | |
GTTCAAACCAGCAATGACAC+CGG | + | chr4.2:3948966-3948985 | None:intergenic | 45.0% | |
TCGGTGAAAGAAACCCATGA+TGG | + | chr4.2:3948396-3948415 | None:intergenic | 45.0% | |
TGCAACATCTGCTGCAAAAG+AGG | - | chr4.2:3948248-3948267 | MS.gene06117:intron | 45.0% | |
TGCTGCCATTGCTTATGGAT+TGG | - | chr4.2:3949015-3949034 | MS.gene06117:CDS | 45.0% | |
TGGAAAGGAACCAAACAAGG+GGG | - | chr4.2:3949662-3949681 | MS.gene06117:CDS | 45.0% | |
! | AGTTGTTTGCTGATCCTGGT+AGG | + | chr4.2:3950009-3950028 | None:intergenic | 45.0% |
! | CATCACGAATAGTCTTGCCA+AGG | + | chr4.2:3948786-3948805 | None:intergenic | 45.0% |
! | GACTTGTTCCGGAAGACAAT+GGG | - | chr4.2:3949519-3949538 | MS.gene06117:intron | 45.0% |
! | TGGAAGCACAAGGATTCCAA+AGG | - | chr4.2:3949611-3949630 | MS.gene06117:CDS | 45.0% |
! | TTCTTGTTGGTGGAAGCACA+AGG | - | chr4.2:3949601-3949620 | MS.gene06117:CDS | 45.0% |
!! | CCGTGAAAGAAGCACTTGAA+TGG | - | chr4.2:3950653-3950672 | MS.gene06117:intron | 45.0% |
!! | CTCGGGAACTTTGATTTGTC+TGG | - | chr4.2:3950198-3950217 | MS.gene06117:intron | 45.0% |
!! | GAAAGAAGCACTTGAATGGC+TGG | - | chr4.2:3950657-3950676 | MS.gene06117:intron | 45.0% |
!! | GGACAAACTTGCTGACAAGT+TGG | - | chr4.2:3950600-3950619 | MS.gene06117:intron | 45.0% |
!! | TGACTTGTTCCGGAAGACAA+TGG | - | chr4.2:3949518-3949537 | MS.gene06117:intron | 45.0% |
!! | TGTCATTGCTGGTTTGAACG+TGG | - | chr4.2:3948967-3948986 | MS.gene06117:CDS | 45.0% |
!!! | ACACCTGGGATTTTTTGGTG+GGG | + | chr4.2:3949980-3949999 | None:intergenic | 45.0% |
!!! | GCAAGGAAGCATTTTGAGTG+GGG | - | chr4.2:3949722-3949741 | MS.gene06117:CDS | 45.0% |
!!! | GTGCAAGGAAGCATTTTGAG+TGG | - | chr4.2:3949720-3949739 | MS.gene06117:CDS | 45.0% |
AACGGAGATACCCATCTTGG+AGG | - | chr4.2:3949145-3949164 | MS.gene06117:intron | 50.0% | |
AAGAAGGCAATGGACGATGC+TGG | - | chr4.2:3949549-3949568 | MS.gene06117:CDS | 50.0% | |
AGCACTTGGAAAGCTGAGGA+GGG | - | chr4.2:3949371-3949390 | MS.gene06117:CDS | 50.0% | |
AGGAAGGGACCACCAAGTTA+GGG | - | chr4.2:3948268-3948287 | MS.gene06117:intron | 50.0% | |
AGGTGAGAGGAGTCTCACAA+AGG | - | chr4.2:3950164-3950183 | MS.gene06117:intron | 50.0% | |
ATGGCTCGCTCTTCTTCTTG+CGG | - | chr4.2:3947504-3947523 | MS.gene06117:CDS | 50.0% | |
CAAAGGATTGCCGTCTTCTC+GGG | - | chr4.2:3950181-3950200 | MS.gene06117:intron | 50.0% | |
CAAGACTATTCGTGATGCCG+TGG | - | chr4.2:3948789-3948808 | MS.gene06117:CDS | 50.0% | |
CATCCCCACCAAAAAATCCC+AGG | - | chr4.2:3949974-3949993 | MS.gene06117:CDS | 50.0% | |
CCAAAGGCAACTGCTTCATC+AGG | + | chr4.2:3949693-3949712 | None:intergenic | 50.0% | |
CCTGATGAAGCAGTTGCCTT+TGG | - | chr4.2:3949690-3949709 | MS.gene06117:CDS | 50.0% | |
CGATGAGAGATTGATTGGGG+AGG | - | chr4.2:3948416-3948435 | MS.gene06117:CDS | 50.0% | |
CTCTGATCAAAGTCCTCACC+TGG | + | chr4.2:3949285-3949304 | None:intergenic | 50.0% | |
CTGGCTACTAAGAGCTCTCT+TGG | + | chr4.2:3949409-3949428 | None:intergenic | 50.0% | |
CTGGTAGGTGGTAAACACCT+GGG | + | chr4.2:3949994-3950013 | None:intergenic | 50.0% | |
CTTCAATGATGCTCAGAGGC+AGG | - | chr4.2:3948928-3948947 | MS.gene06117:CDS | 50.0% | |
CTTGCCAAGGAATGCTTCAG+CGG | + | chr4.2:3948773-3948792 | None:intergenic | 50.0% | |
GACAATGGGACCTGTGAAGA+AGG | - | chr4.2:3949533-3949552 | MS.gene06117:CDS | 50.0% | |
GAGGGTGGTGAAGAAACCAA+AGG | - | chr4.2:3949744-3949763 | MS.gene06117:intron | 50.0% | |
GAGGTGCAACATCCAAGAGA+AGG | + | chr4.2:3949893-3949912 | None:intergenic | 50.0% | |
GATGTTGCACCTCTTACCCT+TGG | - | chr4.2:3949900-3949919 | MS.gene06117:CDS | 50.0% | |
GTGGGGATGACAGTGTTTCT+AGG | + | chr4.2:3949963-3949982 | None:intergenic | 50.0% | |
TCAAATCGAGCACGGGTAAG+TGG | + | chr4.2:3949486-3949505 | None:intergenic | 50.0% | |
TCACAGGTCCCATTGTCTTC+CGG | + | chr4.2:3949530-3949549 | None:intergenic | 50.0% | |
TCCATAAGCAATGGCAGCAG+CGG | + | chr4.2:3949014-3949033 | None:intergenic | 50.0% | |
TCGTCCATTGCCTTCTTCAC+AGG | + | chr4.2:3949546-3949565 | None:intergenic | 50.0% | |
TGAGCCAGGAGGAAATTGAC+CGG | - | chr4.2:3950461-3950480 | MS.gene06117:intron | 50.0% | |
! | ACAGAGCACTTGGAAAGCTG+AGG | - | chr4.2:3949367-3949386 | MS.gene06117:CDS | 50.0% |
! | ACTGCTGTTTACCAGAGGTC+AGG | - | chr4.2:3950757-3950776 | MS.gene06117:intron | 50.0% |
! | AGCAAGGACAACAGAGCACT+TGG | - | chr4.2:3949357-3949376 | MS.gene06117:CDS | 50.0% |
! | GAAACCGCTGAAGCATTCCT+TGG | - | chr4.2:3948766-3948785 | MS.gene06117:CDS | 50.0% |
! | TGTTTGCTGATCCTGGTAGG+TGG | + | chr4.2:3950006-3950025 | None:intergenic | 50.0% |
!! | ATCATGGCACTGACTTCCTC+AGG | + | chr4.2:3948730-3948749 | None:intergenic | 50.0% |
!! | TCATGGCACTGACTTCCTCA+GGG | + | chr4.2:3948729-3948748 | None:intergenic | 50.0% |
!! | TGAGGGGTGTTGTACTCAAC+CGG | - | chr4.2:3950106-3950125 | MS.gene06117:intron | 50.0% |
!!! | AGGAAGCATTTTGAGTGGGG+AGG | - | chr4.2:3949725-3949744 | MS.gene06117:intron | 50.0% |
!!! | GGAAGCATTTTGAGTGGGGA+GGG | - | chr4.2:3949726-3949745 | MS.gene06117:intron | 50.0% |
AATGACACCGGCATCCTTGG+TGG | + | chr4.2:3948954-3948973 | None:intergenic | 55.0% | |
ACCGCTGCTGCCATTGCTTA+TGG | - | chr4.2:3949010-3949029 | MS.gene06117:CDS | 55.0% | |
AGCAATGACACCGGCATCCT+TGG | + | chr4.2:3948957-3948976 | None:intergenic | 55.0% | |
ATAAGCAATGGCAGCAGCGG+TGG | + | chr4.2:3949011-3949030 | None:intergenic | 55.0% | |
CCAGGAGGAAATTGACCGGA+TGG | - | chr4.2:3950465-3950484 | MS.gene06117:intron | 55.0% | |
CCAGGTGTTTACCACCTACC+AGG | - | chr4.2:3949992-3950011 | MS.gene06117:CDS | 55.0% | |
CCATCCGGTCAATTTCCTCC+TGG | + | chr4.2:3950468-3950487 | None:intergenic | 55.0% | |
CCTGGTAGGTGGTAAACACC+TGG | + | chr4.2:3949995-3950014 | None:intergenic | 55.0% | |
GAGCACTTGGAAAGCTGAGG+AGG | - | chr4.2:3949370-3949389 | MS.gene06117:CDS | 55.0% | |
GAGGAAGGGACCACCAAGTT+AGG | - | chr4.2:3948267-3948286 | MS.gene06117:intron | 55.0% | |
GCTGTTTACCAGAGGTCAGG+TGG | - | chr4.2:3950760-3950779 | MS.gene06117:intron | 55.0% | |
GGGACCTGTGAAGAAGGCAA+TGG | - | chr4.2:3949539-3949558 | MS.gene06117:CDS | 55.0% | |
GGTCAATTTCCTCCTGGCTC+AGG | + | chr4.2:3950462-3950481 | None:intergenic | 55.0% | |
GGTCACTGTCCCAGGTGAAT+TGG | - | chr4.2:3948810-3948829 | MS.gene06117:CDS | 55.0% | |
GTCTTCCTCGGCAAACTCCT+CGG | + | chr4.2:3950500-3950519 | None:intergenic | 55.0% | |
TAAGCAATGGCAGCAGCGGT+GGG | + | chr4.2:3949010-3949029 | None:intergenic | 55.0% | |
TCAGGGTTGACCCCCTTGTT+TGG | + | chr4.2:3949675-3949694 | None:intergenic | 55.0% | |
TCCTTGCACTGCAGCACCAA+AGG | + | chr4.2:3949709-3949728 | None:intergenic | 55.0% | |
TGGCAGCTGTCAACCCTGAA+AGG | - | chr4.2:3948451-3948470 | MS.gene06117:intron | 55.0% | |
TGGCTCGCTCTTCTTCTTGC+GGG | - | chr4.2:3947505-3947524 | MS.gene06117:CDS | 55.0% | |
TTCACCTGGGACAGTGACCA+CGG | + | chr4.2:3948809-3948828 | None:intergenic | 55.0% | |
TTCCTCAGGGCTGAACACCT+TGG | + | chr4.2:3948716-3948735 | None:intergenic | 55.0% | |
!! | AAGGATGCCGGTGTCATTGC+TGG | - | chr4.2:3948956-3948975 | MS.gene06117:CDS | 55.0% |
!! | AGCATTTTGAGTGGGGAGGG+TGG | - | chr4.2:3949729-3949748 | MS.gene06117:intron | 55.0% |
!! | AGGGGTGTTGTACTCAACCG+GGG | - | chr4.2:3950108-3950127 | MS.gene06117:intron | 55.0% |
!! | GAGGGGTGTTGTACTCAACC+GGG | - | chr4.2:3950107-3950126 | MS.gene06117:intron | 55.0% |
!! | TTTCCACACGGACTTGGTGC+TGG | + | chr4.2:3949428-3949447 | None:intergenic | 55.0% |
AGCTCCAGGTGGTGCATCAG+GGG | - | chr4.2:3950783-3950802 | MS.gene06117:intron | 60.0% | |
CCTCGGCTTCACGAACCATC+CGG | + | chr4.2:3950483-3950502 | None:intergenic | 60.0% | |
CTGGAATCCCACCAGCTCCA+AGG | - | chr4.2:3950217-3950236 | MS.gene06117:intron | 60.0% | |
GAGCTCCAGGTGGTGCATCA+GGG | - | chr4.2:3950782-3950801 | MS.gene06117:intron | 60.0% | |
TAGCCAGCACCAAGTCCGTG+TGG | - | chr4.2:3949422-3949441 | MS.gene06117:intron | 60.0% | |
TGAAAAGGGACGCCTGAGCC+AGG | - | chr4.2:3950447-3950466 | MS.gene06117:intron | 60.0% | |
TGAAGCCGAGGAGTTTGCCG+AGG | - | chr4.2:3950492-3950511 | MS.gene06117:intron | 60.0% | |
TGGGGAGGCTGCGAAGAATC+TGG | - | chr4.2:3948431-3948450 | MS.gene06117:CDS | 60.0% | |
TGGTGCATCAGGGGAAGGAG+AGG | - | chr4.2:3950792-3950811 | MS.gene06117:CDS | 60.0% | |
! | AGGGCAGAAGACAAGGGCAC+AGG | - | chr4.2:3950397-3950416 | MS.gene06117:intron | 60.0% |
! | GACCAAGGTGTTCAGCCCTG+AGG | - | chr4.2:3948711-3948730 | MS.gene06117:CDS | 60.0% |
!! | GCCTTTGGTGCTGCAGTGCA+AGG | - | chr4.2:3949705-3949724 | MS.gene06117:CDS | 60.0% |
AAAGGGACGCCTGAGCCAGG+AGG | - | chr4.2:3950450-3950469 | MS.gene06117:intron | 65.0% | |
AGGCAGGCCACCAAGGATGC+CGG | - | chr4.2:3948944-3948963 | MS.gene06117:CDS | 65.0% | |
AGGTCAGGTGGAGCTCCAGG+TGG | - | chr4.2:3950772-3950791 | MS.gene06117:intron | 65.0% | |
CAGAGGTCAGGTGGAGCTCC+AGG | - | chr4.2:3950769-3950788 | MS.gene06117:intron | 65.0% | |
CCAGGTGGTGCATCAGGGGA+AGG | - | chr4.2:3950787-3950806 | MS.gene06117:intron | 65.0% | |
CCGGATGGTTCGTGAAGCCG+AGG | - | chr4.2:3950480-3950499 | MS.gene06117:intron | 65.0% | |
CCTTCCCCTGATGCACCACC+TGG | + | chr4.2:3950790-3950809 | None:intergenic | 65.0% | |
CTGGAGCTCCACCTGACCTC+TGG | + | chr4.2:3950771-3950790 | None:intergenic | 65.0% | |
GATGCCGTGGTCACTGTCCC+AGG | - | chr4.2:3948802-3948821 | MS.gene06117:CDS | 65.0% | |
GGAGCTCCAGGTGGTGCATC+AGG | - | chr4.2:3950781-3950800 | MS.gene06117:intron | 65.0% | |
TGCTCAGAGGCAGGCCACCA+AGG | - | chr4.2:3948937-3948956 | MS.gene06117:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 3947504 | 3950846 | 3947504 | ID=MS.gene06117 |
chr4.2 | mRNA | 3947504 | 3950846 | 3947504 | ID=MS.gene06117.t1;Parent=MS.gene06117 |
chr4.2 | exon | 3950792 | 3950846 | 3950792 | ID=MS.gene06117.t1.exon1;Parent=MS.gene06117.t1 |
chr4.2 | CDS | 3950792 | 3950846 | 3950792 | ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1 |
chr4.2 | exon | 3949842 | 3950112 | 3949842 | ID=MS.gene06117.t1.exon2;Parent=MS.gene06117.t1 |
chr4.2 | CDS | 3949842 | 3950112 | 3949842 | ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1 |
chr4.2 | exon | 3949527 | 3949741 | 3949527 | ID=MS.gene06117.t1.exon3;Parent=MS.gene06117.t1 |
chr4.2 | CDS | 3949527 | 3949741 | 3949527 | ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1 |
chr4.2 | exon | 3949184 | 3949426 | 3949184 | ID=MS.gene06117.t1.exon4;Parent=MS.gene06117.t1 |
chr4.2 | CDS | 3949184 | 3949426 | 3949184 | ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1 |
chr4.2 | exon | 3948585 | 3949064 | 3948585 | ID=MS.gene06117.t1.exon5;Parent=MS.gene06117.t1 |
chr4.2 | CDS | 3948585 | 3949064 | 3948585 | ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1 |
chr4.2 | exon | 3948310 | 3948464 | 3948310 | ID=MS.gene06117.t1.exon6;Parent=MS.gene06117.t1 |
chr4.2 | CDS | 3948310 | 3948464 | 3948310 | ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1 |
chr4.2 | exon | 3948112 | 3948194 | 3948112 | ID=MS.gene06117.t1.exon7;Parent=MS.gene06117.t1 |
chr4.2 | CDS | 3948112 | 3948194 | 3948112 | ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1 |
chr4.2 | exon | 3947504 | 3948011 | 3947504 | ID=MS.gene06117.t1.exon8;Parent=MS.gene06117.t1 |
chr4.2 | CDS | 3947504 | 3948011 | 3947504 | ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1 |
Gene Sequence |
Protein sequence |