AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06117


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06117.t1 MTR_8g099945 99.253 669 5 0 1 669 1 669 0.0 1343
MS.gene06117.t1 MTR_8g099795 96.285 646 23 1 1 646 2 646 0.0 1231
MS.gene06117.t1 MTR_7g099680 64.921 630 214 5 36 661 7 633 0.0 837
MS.gene06117.t1 MTR_4g063720 64.263 638 211 5 36 658 7 642 0.0 831
MS.gene06117.t1 MTR_4g063710 65.961 614 203 4 36 645 7 618 0.0 829
MS.gene06117.t1 MTR_7g024390 65.472 614 206 4 36 645 7 618 0.0 828
MS.gene06117.t1 MTR_7g024580 64.038 634 215 5 36 665 7 631 0.0 827
MS.gene06117.t1 MTR_4g130540 64.423 624 214 5 33 652 3 622 0.0 823
MS.gene06117.t1 MTR_2g017730 54.992 611 249 6 33 633 3 597 0.0 667
MS.gene06117.t1 MTR_6g033760 54.125 606 271 5 39 640 10 612 0.0 662
MS.gene06117.t1 MTR_6g033850 53.542 607 275 5 39 641 10 613 0.0 652
MS.gene06117.t1 MTR_7g026030 54.125 606 267 8 36 635 7 607 0.0 647
MS.gene06117.t1 MTR_7g021440 54.486 613 269 7 36 642 7 615 0.0 640
MS.gene06117.t1 MTR_2g038260 55.628 613 259 9 36 640 7 614 0.0 639
MS.gene06117.t1 MTR_7g451380 53.268 612 276 7 36 640 7 615 0.0 636
MS.gene06117.t1 MTR_7g025820 54.223 592 261 7 36 621 7 594 0.0 632
MS.gene06117.t1 MTR_5g066800 52.006 623 278 8 36 641 7 625 0.0 630
MS.gene06117.t1 MTR_2g032550 53.431 612 275 7 36 640 8 616 0.0 630
MS.gene06117.t1 MTR_7g025720 52.805 606 275 8 36 635 7 607 0.0 624
MS.gene06117.t1 MTR_6g033955 51.535 619 288 6 39 648 10 625 0.0 622
MS.gene06117.t1 MTR_7g025790 52.815 604 274 8 36 633 7 605 0.0 622
MS.gene06117.t1 MTR_6g033820 50.889 619 292 6 39 648 10 625 0.0 621
MS.gene06117.t1 MTR_7g025760 51.320 606 285 7 36 635 7 608 0.0 619
MS.gene06117.t1 MTR_7g025620 52.554 607 275 9 36 635 7 607 0.0 619
MS.gene06117.t1 MTR_7g026170 53.659 615 270 11 36 641 7 615 0.0 618
MS.gene06117.t1 MTR_6g033870 51.774 620 286 7 39 648 11 627 0.0 618
MS.gene06117.t1 MTR_7g024030 51.895 607 281 8 36 636 7 608 0.0 615
MS.gene06117.t1 MTR_7g025770 52.224 607 279 8 36 635 7 609 0.0 613
MS.gene06117.t1 MTR_2g022050 52.874 609 277 7 39 640 10 615 0.0 612
MS.gene06117.t1 MTR_8g032650 50.553 633 295 9 36 662 7 627 0.0 609
MS.gene06117.t1 MTR_7g029415 52.960 625 280 11 25 641 3 621 0.0 609
MS.gene06117.t1 MTR_7g026110 51.555 611 284 8 36 640 7 611 0.0 608
MS.gene06117.t1 MTR_7g026090 51.882 611 282 7 36 640 7 611 0.0 608
MS.gene06117.t1 MTR_7g011590 53.030 594 262 8 36 626 7 586 0.0 605
MS.gene06117.t1 MTR_4g079590 51.405 605 283 8 36 633 7 607 0.0 603
MS.gene06117.t1 MTR_2g437440 50.654 612 274 8 36 640 7 597 0.0 599
MS.gene06117.t1 MTR_7g078190 51.967 610 278 10 36 635 7 611 0.0 597
MS.gene06117.t1 MTR_7g025740 49.756 615 289 10 36 635 7 616 0.0 596
MS.gene06117.t1 MTR_8g103930 50.565 619 269 10 39 640 12 610 0.0 585
MS.gene06117.t1 MTR_2g010020 53.276 580 244 10 38 609 57 617 0.0 583
MS.gene06117.t1 MTR_2g010020 53.276 580 244 10 38 609 56 616 0.0 583
MS.gene06117.t1 MTR_4g092920 53.276 580 245 10 38 609 53 614 0.0 580
MS.gene06117.t1 MTR_7g025630 49.751 603 284 9 36 635 7 593 0.0 578
MS.gene06117.t1 MTR_7g078210 51.530 621 287 10 36 647 7 622 0.0 578
MS.gene06117.t1 MTR_7g074460 50.495 606 272 8 36 635 7 590 0.0 576
MS.gene06117.t1 MTR_2g038270 48.714 622 297 11 36 640 7 623 0.0 573
MS.gene06117.t1 MTR_4g027145 49.920 627 287 12 36 641 7 627 0.0 570
MS.gene06117.t1 MTR_7g026130 51.129 620 285 11 36 643 7 620 0.0 569
MS.gene06117.t1 MTR_2g032580 49.673 612 267 8 36 640 7 584 0.0 569
MS.gene06117.t1 MTR_1g017130 50.247 607 251 11 36 635 7 569 0.0 566
MS.gene06117.t1 MTR_7g026140 51.060 613 271 11 36 640 7 598 0.0 565
MS.gene06117.t1 MTR_7g025260 48.586 601 292 8 68 662 11 600 0.0 553
MS.gene06117.t1 MTR_2g005690 48.892 632 285 12 38 658 71 675 0.0 547
MS.gene06117.t1 MTR_6g033800 51.613 527 246 6 119 641 1 522 0.0 535
MS.gene06117.t1 MTR_7g451360 47.869 610 253 10 36 640 7 556 0.0 532
MS.gene06117.t1 MTR_7g007000 47.068 614 268 11 36 640 7 572 1.98e-175 513
MS.gene06117.t1 MTR_4g092920 54.016 498 204 9 119 609 1 480 1.86e-172 503
MS.gene06117.t1 MTR_7g035155 46.982 613 260 13 36 641 7 561 1.69e-168 494
MS.gene06117.t1 MTR_1g041565 46.281 605 242 12 39 635 6 535 2.26e-164 483
MS.gene06117.t1 MTR_2g040370 62.565 382 140 3 36 415 1027 1407 2.33e-153 486
MS.gene06117.t1 MTR_2g040370 62.533 379 138 4 39 414 1414 1791 7.26e-144 460
MS.gene06117.t1 MTR_2g040370 62.565 382 140 3 36 415 1027 1407 2.94e-153 486
MS.gene06117.t1 MTR_2g040370 62.434 378 138 4 39 413 1414 1790 6.08e-143 457
MS.gene06117.t1 MTR_2g040260 60.406 394 153 3 35 426 1035 1427 5.96e-153 480
MS.gene06117.t1 MTR_2g040160 60.051 393 154 3 36 426 1107 1498 3.08e-151 475
MS.gene06117.t1 MTR_4g063720 61.756 353 123 2 317 658 220 571 6.72e-151 449
MS.gene06117.t1 MTR_4g063720 70.320 219 60 3 36 250 7 224 7.67e-97 310
MS.gene06117.t1 MTR_2g032160 57.838 370 149 4 36 399 7 375 1.94e-145 431
MS.gene06117.t1 MTR_2g040350 58.228 395 158 5 38 426 820 1213 7.45e-143 447
MS.gene06117.t1 MTR_2g040220 59.487 390 148 5 36 416 1016 1404 2.96e-142 452
MS.gene06117.t1 MTR_2g040220 39.819 221 65 5 461 663 1386 1556 7.97e-31 130
MS.gene06117.t1 MTR_2g040350 58.228 395 158 5 38 426 1038 1431 1.71e-141 448
MS.gene06117.t1 MTR_6g034005 40.951 547 296 12 109 641 2 535 5.17e-128 395
MS.gene06117.t1 MTR_4g088515 47.442 430 133 9 39 462 277 619 7.14e-114 355
MS.gene06117.t1 MTR_1g077230 60.498 281 104 4 36 310 7 286 1.37e-111 338
MS.gene06117.t1 MTR_7g026080 61.265 253 87 5 36 278 7 258 1.68e-99 305
MS.gene06117.t1 MTR_7g026050 41.304 368 186 4 269 635 1 339 5.96e-86 274
MS.gene06117.t1 MTR_2g031670 52.364 275 105 7 21 274 7 276 1.66e-83 267
MS.gene06117.t1 MTR_2g031670 55.224 67 29 1 368 434 275 340 7.24e-14 73.9
MS.gene06117.t1 MTR_6g033855 40.476 378 138 5 113 487 6 299 2.31e-82 263
MS.gene06117.t1 MTR_6g033810 43.675 332 138 3 113 441 6 291 7.03e-82 261
MS.gene06117.t1 MTR_4g012050 36.387 382 236 4 37 413 2 381 1.54e-76 262
MS.gene06117.t1 MTR_5g092570 28.676 680 390 18 37 639 2 663 2.07e-74 255
MS.gene06117.t1 MTR_2g102180 32.112 464 292 7 37 483 2 459 3.87e-74 256
MS.gene06117.t1 MTR_3g051300 31.034 493 320 11 37 520 2 483 2.40e-73 252
MS.gene06117.t1 MTR_5g006180 31.609 522 294 13 29 520 19 507 3.68e-71 241
MS.gene06117.t1 MTR_2g040355 35.205 463 129 12 216 666 2 305 3.63e-64 215
MS.gene06117.t1 MTR_5g090110 31.504 492 281 13 39 508 29 486 3.12e-62 216
MS.gene06117.t1 MTR_1g077240 42.905 296 158 4 346 640 1 286 7.58e-62 208
MS.gene06117.t1 MTR_1207s0010 58.084 167 68 1 143 307 9 175 1.91e-61 203
MS.gene06117.t1 MTR_3g081170 28.932 515 322 12 12 496 8 508 3.14e-61 220
MS.gene06117.t1 MTR_5g097190 47.303 241 79 6 36 273 156 351 2.37e-58 201
MS.gene06117.t1 MTR_6g478100 49.765 213 88 5 65 273 10 207 4.34e-58 199
MS.gene06117.t1 MTR_4g115780 30.224 536 340 14 39 548 141 668 3.70e-54 197
MS.gene06117.t1 MTR_4g107920 29.880 502 318 12 39 522 21 506 2.03e-53 192
MS.gene06117.t1 MTR_5g005870 33.333 312 193 7 307 614 51 351 1.35e-46 170
MS.gene06117.t1 MTR_1g116250 38.321 274 125 6 368 640 56 286 9.66e-44 159
MS.gene06117.t1 MTR_7g026180 50.581 172 77 4 103 270 21 188 2.29e-41 154
MS.gene06117.t1 MTR_7g026180 33.486 218 109 6 427 641 144 328 2.02e-19 90.5
MS.gene06117.t1 MTR_7g074540 39.604 202 120 2 442 643 1 200 2.10e-39 144
MS.gene06117.t1 MTR_7g451390 46.667 180 93 3 462 640 10 187 5.07e-39 142
MS.gene06117.t1 MTR_6g033910 36.408 206 83 3 101 304 19 178 1.92e-34 130
MS.gene06117.t1 MTR_2g017710 35.714 252 77 6 257 506 25 193 2.31e-34 132
MS.gene06117.t1 MTR_5g005890 32.000 225 103 4 101 323 5 181 6.41e-28 111
MS.gene06117.t1 MTR_1g068900 44.681 141 70 4 452 588 23 159 8.30e-28 110
MS.gene06117.t1 MTR_6g033805 70.968 62 18 0 39 100 10 71 4.46e-24 96.7
MS.gene06117.t1 MTR_4g027235 66.176 68 21 1 36 101 7 74 8.12e-23 92.8
MS.gene06117.t1 MTR_4g027085 66.176 68 21 1 36 101 7 74 8.12e-23 92.8
MS.gene06117.t1 MTR_4g115860 38.710 93 57 0 422 514 29 121 2.13e-16 76.3
MS.gene06117.t1 MTR_6g033815 46.575 73 38 1 550 622 1 72 3.71e-15 72.4
MS.gene06117.t1 MTR_2g040375 63.636 55 20 0 424 478 51 105 7.07e-15 72.0
MS.gene06117.t1 MTR_7g026190 40.659 91 45 2 315 405 12 93 7.31e-13 68.6
MS.gene06117.t1 MTR_7g026095 37.736 106 61 2 499 600 243 347 2.08e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06117.t1 AT5G42020 89.836 669 67 1 1 669 1 668 0.0 1221
MS.gene06117.t1 AT5G28540 91.190 647 56 1 1 647 1 646 0.0 1208
MS.gene06117.t1 AT5G42020 91.091 651 57 1 19 669 24 673 0.0 1207
MS.gene06117.t1 AT1G09080 77.419 651 142 2 1 647 11 660 0.0 1016
MS.gene06117.t1 AT1G09080 77.743 647 137 2 1 647 11 650 0.0 1011
MS.gene06117.t1 AT5G42020 77.015 670 96 5 1 669 1 613 0.0 998
MS.gene06117.t1 AT3G12580 64.547 629 217 4 36 660 7 633 0.0 832
MS.gene06117.t1 AT3G09440 66.234 616 198 5 36 645 7 618 0.0 828
MS.gene06117.t1 AT3G09440 66.234 616 198 5 36 645 7 618 0.0 828
MS.gene06117.t1 AT3G09440 66.234 616 198 5 36 645 7 618 0.0 828
MS.gene06117.t1 AT3G09440 66.234 616 198 5 36 645 7 618 0.0 828
MS.gene06117.t1 AT5G02500 64.984 614 209 4 36 645 7 618 0.0 824
MS.gene06117.t1 AT1G16030 63.550 631 223 5 33 659 3 630 0.0 824
MS.gene06117.t1 AT5G02490 64.984 614 209 4 36 645 7 618 0.0 820
MS.gene06117.t1 AT1G56410 62.704 614 221 4 36 645 7 616 0.0 789
MS.gene06117.t1 AT5G09590 54.138 580 240 11 38 609 59 620 0.0 584
MS.gene06117.t1 AT4G37910 54.310 580 239 11 38 609 54 615 0.0 560
MS.gene06117.t1 AT4G37910 54.310 580 239 11 38 609 54 615 0.0 560
MS.gene06117.t1 AT4G24280 50.934 589 270 11 38 621 80 654 0.0 548
MS.gene06117.t1 AT5G49910 49.196 622 292 13 38 654 80 682 0.0 547
MS.gene06117.t1 AT5G02500 67.010 388 123 3 36 419 7 393 0.0 530
MS.gene06117.t1 AT5G02500 48.077 104 53 1 542 645 386 488 1.97e-25 111
MS.gene06117.t1 AT1G11660 28.356 663 400 14 37 639 2 649 7.18e-82 275
MS.gene06117.t1 AT1G11660 28.356 663 400 14 37 639 2 649 7.18e-82 275
MS.gene06117.t1 AT1G11660 28.356 663 400 14 37 639 2 649 7.18e-82 275
MS.gene06117.t1 AT2G32120 32.877 511 312 10 39 534 31 525 2.41e-77 258
MS.gene06117.t1 AT2G32120 32.877 511 312 10 39 534 31 525 2.41e-77 258
MS.gene06117.t1 AT1G79930 32.159 454 285 7 37 473 2 449 3.15e-75 257
MS.gene06117.t1 AT1G79930 32.159 454 285 7 37 473 2 449 5.83e-75 258
MS.gene06117.t1 AT1G79920 31.718 454 287 7 37 473 2 449 4.20e-74 253
MS.gene06117.t1 AT1G79920 31.718 454 287 7 37 473 2 449 4.20e-74 253
MS.gene06117.t1 AT1G79920 31.718 454 287 7 37 473 2 449 4.20e-74 253
MS.gene06117.t1 AT1G79920 31.718 454 287 7 37 473 2 449 4.94e-74 253
MS.gene06117.t1 AT1G11660 28.275 626 374 14 74 639 2 612 9.21e-73 249
MS.gene06117.t1 AT4G16660 26.075 721 403 21 36 639 24 731 7.94e-63 224
MS.gene06117.t1 AT4G16660 26.075 721 403 21 36 639 48 755 9.82e-63 224

Find 194 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATCAAAGATGGTCCTTTC+AGG 0.185011 4.2:+3949863 None:intergenic
ACCAAGTTAGGGACTGTTAT+TGG 0.230124 4.2:-3950049 MS.gene06117:CDS
ACCGCTGCTGCCATTGCTTA+TGG 0.244088 4.2:-3949318 MS.gene06117:CDS
AACATTCTTGTCTTTGATCT+TGG 0.281163 4.2:-3949270 MS.gene06117:CDS
GCAAACAACTGTTTCTATTC+AGG 0.282305 4.2:-3948309 MS.gene06117:intron
GGAGCTCCAGGTGGTGCATC+AGG 0.283486 4.2:-3947547 MS.gene06117:CDS
TGGTAAACAGCAGTGATAAT+TGG 0.285966 4.2:+3947580 None:intergenic
CTCGGGAACTTTGATTTGTC+TGG 0.291494 4.2:-3948130 MS.gene06117:CDS
TTCAAAAGTTGTTGTACCTT+TGG 0.293588 4.2:+3948701 None:intergenic
TTTGATGTCAAGAGACTTAT+CGG 0.304645 4.2:-3949848 MS.gene06117:CDS
GAGGAAGGGACCACCAAGTT+AGG 0.330316 4.2:-3950061 MS.gene06117:CDS
CAAACGGTATTCTAAATGTT+AGG 0.333992 4.2:-3947951 MS.gene06117:CDS
GTTTGTCCTTGTCACTGATT+TGG 0.335858 4.2:+3947743 None:intergenic
GTGGGGATGACAGTGTTTCT+AGG 0.341786 4.2:+3948368 None:intergenic
TGCTTCTTTCTTCAGATTTG+AGG 0.345147 4.2:-3949734 MS.gene06117:intron
ACCGACGATGAGAGATTGAT+TGG 0.362358 4.2:-3949917 MS.gene06117:CDS
AAGGATGCCGGTGTCATTGC+TGG 0.366360 4.2:-3949372 MS.gene06117:CDS
TCACAGGTCCCATTGTCTTC+CGG 0.366501 4.2:+3948801 None:intergenic
CTTCTCACCATCATCTCCTT+AGG 0.367766 4.2:-3950791 MS.gene06117:intron
CCAAGTTAGGGACTGTTATT+GGG 0.369182 4.2:-3950048 MS.gene06117:CDS
CTTGTCTTTGATCTTGGAGG+TGG 0.371703 4.2:-3949264 MS.gene06117:CDS
CCTTCCCCTGATGCACCACC+TGG 0.374305 4.2:+3947541 None:intergenic
TGGCTCGCTCTTCTTCTTGC+GGG 0.374938 4.2:-3950823 MS.gene06117:CDS
ACTGTTATTGGGATAGATCT+TGG 0.377061 4.2:-3950037 MS.gene06117:CDS
ACTCTTCTTTCTCAACAGTT+TGG 0.379400 4.2:+3947641 None:intergenic
CCATTCAAGTGCTTCTTTCA+CGG 0.386836 4.2:+3947675 None:intergenic
ACAAAGGATTGCCGTCTTCT+CGG 0.387262 4.2:-3948148 MS.gene06117:CDS
CTTCACTTTCTTGTCTTCCT+CGG 0.392206 4.2:+3947819 None:intergenic
CCAAAGGCAACTGCTTCATC+AGG 0.398543 4.2:+3948638 None:intergenic
TTTACTCTGACCTGAATGTA+TGG 0.402451 4.2:+3949649 None:intergenic
ATTCTTGTCTTTGATCTTGG+AGG 0.402766 4.2:-3949267 MS.gene06117:CDS
TTTCTTCAGATTTGAGGATA+AGG 0.403180 4.2:-3949728 MS.gene06117:intron
CATCAAAGATGGTCCTTTCA+GGG 0.407212 4.2:+3949864 None:intergenic
AGTTGAACAATGACTTGTTC+CGG 0.409326 4.2:-3948820 MS.gene06117:CDS
CAAAGGATTGCCGTCTTCTC+GGG 0.410284 4.2:-3948147 MS.gene06117:CDS
TGGGGAGGCTGCGAAGAATC+TGG 0.418293 4.2:-3949897 MS.gene06117:CDS
GATCACCATTACAAATGAAA+AGG 0.423968 4.2:-3947896 MS.gene06117:CDS
GTATCCAGATATCCTTCTCT+TGG 0.424894 4.2:-3948450 MS.gene06117:intron
GGTAAACAGCAGTGATAATT+GGG 0.429598 4.2:+3947581 None:intergenic
ATCATGGCACTGACTTCCTC+AGG 0.433544 4.2:+3949601 None:intergenic
ATTGATGAGATTGTTCTTGT+TGG 0.434577 4.2:-3948740 MS.gene06117:CDS
CTGGCTACTAAGAGCTCTCT+TGG 0.435105 4.2:+3948922 None:intergenic
CCCAATAACAGTCCCTAACT+TGG 0.435276 4.2:+3950048 None:intergenic
GATGTTGCACCTCTTACCCT+TGG 0.436670 4.2:-3948428 MS.gene06117:CDS
TATTATGAATAGGTGTTTGA+AGG 0.440657 4.2:-3948184 MS.gene06117:intron
CTTCATCTTAGTCAGAATCA+TGG 0.442913 4.2:+3949585 None:intergenic
AAACAGTTGTTTGCTGATCC+TGG 0.445328 4.2:+3948318 None:intergenic
TGCAACATCTGCTGCAAAAG+AGG 0.446763 4.2:-3950080 MS.gene06117:CDS
CAAGTTGGAATCAGATGAAA+AGG 0.446989 4.2:-3947713 MS.gene06117:CDS
CAAAGGTCACTTCAATTTGA+GGG 0.447858 4.2:+3947983 None:intergenic
GGACTTTGATCAGAGAATAA+TGG 0.449888 4.2:-3949038 MS.gene06117:CDS
TCAAAGGTCACTTCAATTTG+AGG 0.450757 4.2:+3947982 None:intergenic
CAGAGGTCAGGTGGAGCTCC+AGG 0.453414 4.2:-3947559 MS.gene06117:CDS
CCTGATGAAGCAGTTGCCTT+TGG 0.453901 4.2:-3948638 MS.gene06117:CDS
AGCAATGACACCGGCATCCT+TGG 0.458285 4.2:+3949374 None:intergenic
CCGACGATGAGAGATTGATT+GGG 0.463196 4.2:-3949916 MS.gene06117:CDS
GACTTGTTCCGGAAGACAAT+GGG 0.468406 4.2:-3948809 MS.gene06117:CDS
GTTTCAATTCCAAGGGTAAG+AGG 0.470308 4.2:+3948419 None:intergenic
GGATGGAAAACCATACATTC+AGG 0.477959 4.2:-3949659 MS.gene06117:CDS
TCGTCCATTGCCTTCTTCAC+AGG 0.478204 4.2:+3948785 None:intergenic
TGAAAAGGGACGCCTGAGCC+AGG 0.478721 4.2:-3947881 MS.gene06117:CDS
GGTCAATTTCCTCCTGGCTC+AGG 0.479380 4.2:+3947869 None:intergenic
TTTGAGGTTCTTTCTACAAA+CGG 0.480420 4.2:-3949201 MS.gene06117:CDS
CTCCAACAGTTTCAATTCCA+AGG 0.480598 4.2:+3948411 None:intergenic
TCCTTGTTGACAATCTTGTA+AGG 0.485086 4.2:+3949679 None:intergenic
ATGGCTCGCTCTTCTTCTTG+CGG 0.485978 4.2:-3950824 MS.gene06117:CDS
TTTCCACACGGACTTGGTGC+TGG 0.487623 4.2:+3948903 None:intergenic
TGCTGCCATTGCTTATGGAT+TGG 0.489882 4.2:-3949313 MS.gene06117:CDS
GATGCCGTGGTCACTGTCCC+AGG 0.494172 4.2:-3949526 MS.gene06117:intron
GTCTTCCTCGGCAAACTCCT+CGG 0.495002 4.2:+3947831 None:intergenic
CCTGGTAGGTGGTAAACACC+TGG 0.496443 4.2:+3948336 None:intergenic
AATGACACCGGCATCCTTGG+TGG 0.499327 4.2:+3949377 None:intergenic
ATCACCATTACAAATGAAAA+GGG 0.502193 4.2:-3947895 MS.gene06117:CDS
ACTCAATTTCCACACGGACT+TGG 0.504632 4.2:+3948897 None:intergenic
CTGGAGCTCCACCTGACCTC+TGG 0.505070 4.2:+3947560 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.507132 4.2:-3949400 MS.gene06117:CDS
GACAATGGGACCTGTGAAGA+AGG 0.509040 4.2:-3948795 MS.gene06117:CDS
AGTGATAATTGGGTTGCAAA+CGG 0.511011 4.2:+3947591 None:intergenic
ACCCTTGGAATTGAAACTGT+TGG 0.511117 4.2:-3948413 MS.gene06117:CDS
GAAAGAAGCACTTGAATGGC+TGG 0.513283 4.2:-3947671 MS.gene06117:CDS
GCTTATGGATTGGACAAGAA+AGG 0.514548 4.2:-3949303 MS.gene06117:CDS
CATGATTCTGACTAAGATGA+AGG 0.516191 4.2:-3949584 MS.gene06117:CDS
TCCTTGCACTGCAGCACCAA+AGG 0.516370 4.2:+3948622 None:intergenic
AAACGGTATTCTAAATGTTA+GGG 0.516624 4.2:-3947950 MS.gene06117:CDS
GAGCTCCAGGTGGTGCATCA+GGG 0.517615 4.2:-3947546 MS.gene06117:CDS
CCATCCGGTCAATTTCCTCC+TGG 0.517789 4.2:+3947863 None:intergenic
TCAAATCGAGCACGGGTAAG+TGG 0.518725 4.2:+3948845 None:intergenic
AAGAAGGCAATGGACGATGC+TGG 0.518963 4.2:-3948779 MS.gene06117:CDS
GAAGGATTACTTTGATGGAA+AGG 0.521373 4.2:-3948681 MS.gene06117:CDS
GATACGATTTCCTTGGTCGT+TGG 0.522054 4.2:+3949961 None:intergenic
GGACAAACTTGCTGACAAGT+TGG 0.525676 4.2:-3947728 MS.gene06117:CDS
AAAACAAACCTTGGAGCTGG+TGG 0.525948 4.2:+3948103 None:intergenic
TACAAGATTGTCAACAAGGA+TGG 0.525974 4.2:-3949676 MS.gene06117:CDS
AGGAAGGGACCACCAAGTTA+GGG 0.527633 4.2:-3950060 MS.gene06117:CDS
AGCAAGGACAACAGAGCACT+TGG 0.529505 4.2:-3948971 MS.gene06117:CDS
ATAAGCAATGGCAGCAGCGG+TGG 0.530847 4.2:+3949320 None:intergenic
TGATGGAAAGGAACCAAACA+AGG 0.531735 4.2:-3948669 MS.gene06117:CDS
ACTGCTGTTTACCAGAGGTC+AGG 0.531930 4.2:-3947571 MS.gene06117:CDS
ATAATTACCTAAGGAGATGA+TGG 0.532489 4.2:+3950784 None:intergenic
ACCGTTTGCATCTACTTCAA+AGG 0.532713 4.2:+3947966 None:intergenic
GAAATCGTATCACACCATCA+TGG 0.533173 4.2:-3949949 MS.gene06117:CDS
AGGCAGGCCACCAAGGATGC+CGG 0.534449 4.2:-3949384 MS.gene06117:CDS
AATAGGTGTTTGAAGGTGAG+AGG 0.535211 4.2:-3948177 MS.gene06117:intron
CCTCGGCTTCACGAACCATC+CGG 0.536252 4.2:+3947848 None:intergenic
GATGAGATTGTTCTTGTTGG+TGG 0.537949 4.2:-3948737 MS.gene06117:CDS
AAATCGTATCACACCATCAT+GGG 0.540268 4.2:-3949948 MS.gene06117:CDS
CCGTGAAAGAAGCACTTGAA+TGG 0.543546 4.2:-3947675 MS.gene06117:CDS
TGGCAGCTGTCAACCCTGAA+AGG 0.545326 4.2:-3949877 MS.gene06117:CDS
ACAAACGGAGATACCCATCT+TGG 0.546553 4.2:-3949186 MS.gene06117:CDS
TGTGTTGGTGTTTACAAGAA+CGG 0.547276 4.2:-3950001 MS.gene06117:CDS
AAATGTTAGGGCAGAAGACA+AGG 0.547526 4.2:-3947938 MS.gene06117:CDS
GAGCACTTGGAAAGCTGAGG+AGG 0.547900 4.2:-3948958 MS.gene06117:CDS
CTTGGAATTGAAACTGTTGG+AGG 0.549933 4.2:-3948410 MS.gene06117:CDS
GAAACCGCTGAAGCATTCCT+TGG 0.551326 4.2:-3949562 MS.gene06117:CDS
AAGTCTCTTGACATCAAAGA+TGG 0.553461 4.2:+3949853 None:intergenic
ATAAGTACTCACCTCCAAGA+TGG 0.554153 4.2:+3949172 None:intergenic
GCCTTTGGTGCTGCAGTGCA+AGG 0.554487 4.2:-3948623 MS.gene06117:CDS
CACAAAACAAACCTTGGAGC+TGG 0.555992 4.2:+3948100 None:intergenic
AGCTCCAGGTGGTGCATCAG+GGG 0.556960 4.2:-3947545 MS.gene06117:CDS
ATACATTCAGGTCAGAGTAA+AGG 0.559988 4.2:-3949647 MS.gene06117:CDS
ACCTTTGAAGTAGATGCAAA+CGG 0.560638 4.2:-3947967 MS.gene06117:CDS
CCAGGTGGTGCATCAGGGGA+AGG 0.561188 4.2:-3947541 MS.gene06117:CDS
TGCTCAGAGGCAGGCCACCA+AGG 0.561411 4.2:-3949391 MS.gene06117:CDS
CCAGGTGTTTACCACCTACC+AGG 0.561692 4.2:-3948336 MS.gene06117:CDS
TTCCTCAGGGCTGAACACCT+TGG 0.565203 4.2:+3949615 None:intergenic
CTGGAATCCCACCAGCTCCA+AGG 0.566039 4.2:-3948111 MS.gene06117:intron
ACATCTGCTGCAAAAGAGGA+AGG 0.567823 4.2:-3950076 MS.gene06117:CDS
CCCAATCAATCTCTCATCGT+CGG 0.570425 4.2:+3949916 None:intergenic
TAAGTACTCACCTCCAAGAT+GGG 0.574552 4.2:+3949173 None:intergenic
TGGTGCATCAGGGGAAGGAG+AGG 0.575558 4.2:-3947536 MS.gene06117:CDS
TCCAACAGTTTCAATTCCAA+GGG 0.575984 4.2:+3948412 None:intergenic
TGACTTGTTCCGGAAGACAA+TGG 0.576660 4.2:-3948810 MS.gene06117:CDS
TCCTTACAAGATTGTCAACA+AGG 0.577546 4.2:-3949680 MS.gene06117:CDS
AATAACAGTCCCTAACTTGG+TGG 0.577985 4.2:+3950051 None:intergenic
AATCAAAGTTCCCGAGAAGA+CGG 0.581537 4.2:+3948137 None:intergenic
AACGGAGATACCCATCTTGG+AGG 0.583876 4.2:-3949183 MS.gene06117:intron
TCCATAAGCAATGGCAGCAG+CGG 0.585512 4.2:+3949317 None:intergenic
CTTGTCCAATCCATAAGCAA+TGG 0.592089 4.2:+3949308 None:intergenic
CAACTCTTCAAATCGAGCAC+GGG 0.593000 4.2:+3948838 None:intergenic
TGAAGGAAAGAATTGATGCT+CGG 0.593052 4.2:-3947801 MS.gene06117:CDS
CCAGGAGGAAATTGACCGGA+TGG 0.593074 4.2:-3947863 MS.gene06117:CDS
TCAACTCTTCAAATCGAGCA+CGG 0.593848 4.2:+3948837 None:intergenic
AGGGCAGAAGACAAGGGCAC+AGG 0.595427 4.2:-3947931 MS.gene06117:CDS
GGAACAACATATTCATGTGT+TGG 0.597629 4.2:-3950016 MS.gene06117:CDS
ATGGTGTGATACGATTTCCT+TGG 0.600611 4.2:+3949954 None:intergenic
GCTGTTTACCAGAGGTCAGG+TGG 0.602705 4.2:-3947568 MS.gene06117:CDS
CCGGATGGTTCGTGAAGCCG+AGG 0.603140 4.2:-3947848 MS.gene06117:CDS
TGAGCCAGGAGGAAATTGAC+CGG 0.604755 4.2:-3947867 MS.gene06117:CDS
AAAGGTCACTTCAATTTGAG+GGG 0.605663 4.2:+3947984 None:intergenic
GAGGTGCAACATCCAAGAGA+AGG 0.607551 4.2:+3948438 None:intergenic
TAAGCAATGGCAGCAGCGGT+GGG 0.609672 4.2:+3949321 None:intergenic
AGCACTTGGAAAGCTGAGGA+GGG 0.611229 4.2:-3948957 MS.gene06117:CDS
CGATGAGAGATTGATTGGGG+AGG 0.612921 4.2:-3949912 MS.gene06117:CDS
CTTGCCAAGGAATGCTTCAG+CGG 0.613919 4.2:+3949558 None:intergenic
CGAGGAAGACAAGAAAGTGA+AGG 0.622597 4.2:-3947818 MS.gene06117:CDS
GCATAGCAAGGATATTAGCA+AGG 0.623368 4.2:-3948987 MS.gene06117:CDS
CGACGATGAGAGATTGATTG+GGG 0.628193 4.2:-3949915 MS.gene06117:CDS
TGTTTGCTGATCCTGGTAGG+TGG 0.630248 4.2:+3948325 None:intergenic
CAAGACTATTCGTGATGCCG+TGG 0.630982 4.2:-3949539 MS.gene06117:CDS
GAAATCATAGCCAACGACCA+AGG 0.633608 4.2:-3949971 MS.gene06117:CDS
CTGGTAGGTGGTAAACACCT+GGG 0.633786 4.2:+3948337 None:intergenic
AGGTCAGGTGGAGCTCCAGG+TGG 0.634814 4.2:-3947556 MS.gene06117:CDS
TTCTTGTTGGTGGAAGCACA+AGG 0.637706 4.2:-3948727 MS.gene06117:CDS
AAACAAACCTTGGAGCTGGT+GGG 0.639146 4.2:+3948104 None:intergenic
GGGACCTGTGAAGAAGGCAA+TGG 0.639949 4.2:-3948789 MS.gene06117:CDS
TTCACCTGGGACAGTGACCA+CGG 0.640825 4.2:+3949522 None:intergenic
AGTTGTTTGCTGATCCTGGT+AGG 0.644960 4.2:+3948322 None:intergenic
TGAAGCCGAGGAGTTTGCCG+AGG 0.647044 4.2:-3947836 MS.gene06117:CDS
TATGGATTGGACAAGAAAGG+TGG 0.647597 4.2:-3949300 MS.gene06117:CDS
CAAAGGCAACTGCTTCATCA+GGG 0.652946 4.2:+3948639 None:intergenic
GATGGAAAGGAACCAAACAA+GGG 0.654365 4.2:-3948668 MS.gene06117:CDS
AGTAAAGGATGGTGAGACCA+AGG 0.655359 4.2:-3949632 MS.gene06117:CDS
TGTCATTGCTGGTTTGAACG+TGG 0.655475 4.2:-3949361 MS.gene06117:CDS
TTATCACTGCTGTTTACCAG+AGG 0.655496 4.2:-3947576 MS.gene06117:CDS
CATCTGCTGCAAAAGAGGAA+GGG 0.658549 4.2:-3950075 MS.gene06117:CDS
ATGGAAAGGAACCAAACAAG+GGG 0.659203 4.2:-3948667 MS.gene06117:CDS
ATTCAGGTCAGAGTAAAGGA+TGG 0.659644 4.2:-3949643 MS.gene06117:CDS
TCATGGCACTGACTTCCTCA+GGG 0.661707 4.2:+3949602 None:intergenic
GCAAGAAGAAGAGCGAGCCA+TGG 0.662253 4.2:+3950826 None:intergenic
ACAGAGCACTTGGAAAGCTG+AGG 0.662613 4.2:-3948961 MS.gene06117:CDS
GTTCAAACCAGCAATGACAC+CGG 0.667444 4.2:+3949365 None:intergenic
TCGGTGAAAGAAACCCATGA+TGG 0.669628 4.2:+3949935 None:intergenic
CATCACGAATAGTCTTGCCA+AGG 0.671739 4.2:+3949545 None:intergenic
GACCAAGGTGTTCAGCCCTG+AGG 0.674395 4.2:-3949617 MS.gene06117:CDS
TAGCCAGCACCAAGTCCGTG+TGG 0.679452 4.2:-3948906 MS.gene06117:CDS
TGGAAGCACAAGGATTCCAA+AGG 0.684118 4.2:-3948717 MS.gene06117:CDS
AATGTTAGGGCAGAAGACAA+GGG 0.691069 4.2:-3947937 MS.gene06117:CDS
AGGTGAGAGGAGTCTCACAA+AGG 0.713013 4.2:-3948164 MS.gene06117:CDS
AAAGGGACGCCTGAGCCAGG+AGG 0.717721 4.2:-3947878 MS.gene06117:CDS
CTTACTTCAATGATGCTCAG+AGG 0.721672 4.2:-3949404 MS.gene06117:CDS
AGTATCTTGACAATTGACAA+TGG 0.727159 4.2:-3949228 MS.gene06117:CDS
GAGGGTGGTGAAGAAACCAA+AGG 0.727490 4.2:-3948584 MS.gene06117:intron
AAAGTGACTCAATTTCCACA+CGG 0.743191 4.2:+3948891 None:intergenic
TGGAAAGGAACCAAACAAGG+GGG 0.770257 4.2:-3948666 MS.gene06117:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTCAAAACATTTAAAT+CGG + chr4.2:3948186-3948205 None:intergenic 15.0%
!! AACATAAATCAACTATTTAA+AGG + chr4.2:3948113-3948132 None:intergenic 15.0%
!! ATTAATTAACAGTCTTTAAA+AGG + chr4.2:3947869-3947888 None:intergenic 15.0%
!! TTGTTATAATTTGATGTAAT+GGG - chr4.2:3948554-3948573 MS.gene06117:intron 15.0%
!!! TTTGTTATAATTTGATGTAA+TGG - chr4.2:3948553-3948572 MS.gene06117:intron 15.0%
!! AAATACAATATTGTGTAATG+AGG - chr4.2:3950088-3950107 MS.gene06117:CDS 20.0%
!! AACAAATAAAAAGGTCTAAT+TGG + chr4.2:3947932-3947951 None:intergenic 20.0%
!! AATACAATATTGTGTAATGA+GGG - chr4.2:3950089-3950108 MS.gene06117:CDS 20.0%
!! AGATATGTAATAATTACCTA+AGG + chr4.2:3947556-3947575 None:intergenic 20.0%
!! ATGTTAAAATGAAGACAAAA+TGG + chr4.2:3948879-3948898 None:intergenic 20.0%
!! ATTACAAATAGAACCTTAAA+CGG + chr4.2:3948086-3948105 None:intergenic 20.0%
!! GATAATCCAAACAAATAAAA+AGG + chr4.2:3947941-3947960 None:intergenic 20.0%
!! TACACAATATTGTATTTAGA+AGG + chr4.2:3950085-3950104 None:intergenic 20.0%
!! TGTTAAAATGAAGACAAAAT+GGG + chr4.2:3948878-3948897 None:intergenic 20.0%
!!! ATTAGACCTTTTTATTTGTT+TGG - chr4.2:3947932-3947951 MS.gene06117:CDS 20.0%
!!! GTTTTAGATCTTTGATTTTA+TGG - chr4.2:3947637-3947656 MS.gene06117:CDS 20.0%
!!! TAGTTGATTTATGTTGTTTT+CGG - chr4.2:3948118-3948137 MS.gene06117:CDS 20.0%
!!! TGATTAATCAATTTTTCTTG+TGG - chr4.2:3950305-3950324 MS.gene06117:intron 20.0%
!!! TGTCTGTTTTTATTATGAAT+AGG - chr4.2:3950134-3950153 MS.gene06117:intron 20.0%
!!! TTACTAGTGATTTATTTTAC+TGG - chr4.2:3947998-3948017 MS.gene06117:intron 20.0%
!!! TTGTTTTGTTTTGAATTTTG+TGG - chr4.2:3947807-3947826 MS.gene06117:CDS 20.0%
! AAACGGTATTCTAAATGTTA+GGG - chr4.2:3950378-3950397 MS.gene06117:intron 25.0%
! ACAAAAGCAATGAGAAAAAA+AGG + chr4.2:3947616-3947635 None:intergenic 25.0%
! AGATGAAAAGGAAAAAATTG+AGG - chr4.2:3950627-3950646 MS.gene06117:intron 25.0%
! ATACAATATTGTGTAATGAG+GGG - chr4.2:3950090-3950109 MS.gene06117:CDS 25.0%
! ATCACCATTACAAATGAAAA+GGG - chr4.2:3950433-3950452 MS.gene06117:intron 25.0%
! GTTAAAATGAAGACAAAATG+GGG + chr4.2:3948877-3948896 None:intergenic 25.0%
! TATTATGAATAGGTGTTTGA+AGG - chr4.2:3950144-3950163 MS.gene06117:intron 25.0%
! TTACAAATAGAACCTTAAAC+GGG + chr4.2:3948085-3948104 None:intergenic 25.0%
!!! AGTTGATTTATGTTGTTTTC+GGG - chr4.2:3948119-3948138 MS.gene06117:CDS 25.0%
!!! TATTTGTTATTGATGCAAGT+AGG - chr4.2:3949815-3949834 MS.gene06117:intron 25.0%
!!! TGTCTTCATTTTAACATTTC+TGG - chr4.2:3948882-3948901 MS.gene06117:CDS 25.0%
!!! TTTATTTTACTGGCTTCAAA+TGG - chr4.2:3948008-3948027 MS.gene06117:intron 25.0%
AACATTCTTGTCTTTGATCT+TGG - chr4.2:3949058-3949077 MS.gene06117:intron 30.0%
AACGGGAAAAAACATGATTA+TGG + chr4.2:3948068-3948087 None:intergenic 30.0%
AATTAGAATGTGATGCAAGT+AGG + chr4.2:3947687-3947706 None:intergenic 30.0%
AGTATCTTGACAATTGACAA+TGG - chr4.2:3949100-3949119 MS.gene06117:intron 30.0%
ATAATTACCTAAGGAGATGA+TGG + chr4.2:3947547-3947566 None:intergenic 30.0%
ATAGACTATAATGGTACCTT+TGG + chr4.2:3949763-3949782 None:intergenic 30.0%
ATTAGAATGTGATGCAAGTA+GGG + chr4.2:3947686-3947705 None:intergenic 30.0%
ATTGATGAGATTGTTCTTGT+TGG - chr4.2:3949588-3949607 MS.gene06117:CDS 30.0%
CAAACGGTATTCTAAATGTT+AGG - chr4.2:3950377-3950396 MS.gene06117:intron 30.0%
CTTCTATGAACTTTCTCTAT+TGG - chr4.2:3950263-3950282 MS.gene06117:intron 30.0%
GATCACCATTACAAATGAAA+AGG - chr4.2:3950432-3950451 MS.gene06117:intron 30.0%
TAACTCTTCAATTGTTTACC+AGG - chr4.2:3949264-3949283 MS.gene06117:CDS 30.0%
TAATTAATACAATTACGCGC+CGG - chr4.2:3947881-3947900 MS.gene06117:CDS 30.0%
TGATATCACAAAACAAACCT+TGG + chr4.2:3950237-3950256 None:intergenic 30.0%
TTCAAAAGTTGTTGTACCTT+TGG + chr4.2:3949630-3949649 None:intergenic 30.0%
TTGTCGTTATAATATTGCGA+TGG - chr4.2:3948205-3948224 MS.gene06117:intron 30.0%
TTTCTTCAGATTTGAGGATA+AGG - chr4.2:3948600-3948619 MS.gene06117:CDS 30.0%
TTTGATGTCAAGAGACTTAT+CGG - chr4.2:3948480-3948499 MS.gene06117:intron 30.0%
! GTTTTTCATGTTGTAGACAT+AGG + chr4.2:3950566-3950585 None:intergenic 30.0%
! TTTGAGGTTCTTTCTACAAA+CGG - chr4.2:3949127-3949146 MS.gene06117:intron 30.0%
! TTTTATGGGATGTGATTACA+TGG - chr4.2:3948148-3948167 MS.gene06117:CDS 30.0%
!! AAAGGTACAACAACTTTTGA+AGG - chr4.2:3949629-3949648 MS.gene06117:CDS 30.0%
!! AATTGACAATGGTGTTTTTG+AGG - chr4.2:3949111-3949130 MS.gene06117:intron 30.0%
!! CTTCTAAGATTCAAAGAAAC+CGG + chr4.2:3947903-3947922 None:intergenic 30.0%
!! CTTTTGAAGGATTACTTTGA+TGG - chr4.2:3949642-3949661 MS.gene06117:CDS 30.0%
!!! ATCATGTTTTTTCCCGTTTA+AGG - chr4.2:3948070-3948089 MS.gene06117:intron 30.0%
!!! GAAATTGAGTCACTTTTTGA+TGG - chr4.2:3949444-3949463 MS.gene06117:intron 30.0%
!!! TTTTCGGGTAATGCTTTTAT+GGG - chr4.2:3948134-3948153 MS.gene06117:CDS 30.0%
AAAGGTCACTTCAATTTGAG+GGG + chr4.2:3950347-3950366 None:intergenic 35.0%
AAAGTGACTCAATTTCCACA+CGG + chr4.2:3949440-3949459 None:intergenic 35.0%
AAATCGTATCACACCATCAT+GGG - chr4.2:3948380-3948399 MS.gene06117:CDS 35.0%
AAGTCTCTTGACATCAAAGA+TGG + chr4.2:3948478-3948497 None:intergenic 35.0%
AATAAAAACAGACAACACCC+CGG + chr4.2:3950128-3950147 None:intergenic 35.0%
ACAATTGAAGAGTTAGCACT+TGG + chr4.2:3949259-3949278 None:intergenic 35.0%
ACTCTTCTTTCTCAACAGTT+TGG + chr4.2:3950690-3950709 None:intergenic 35.0%
ACTGTTATTGGGATAGATCT+TGG - chr4.2:3948291-3948310 MS.gene06117:intron 35.0%
AGCAATATGCAGTGGAATAA+TGG + chr4.2:3950052-3950071 None:intergenic 35.0%
AGCTACCTAATGCAATTGAA+AGG + chr4.2:3949793-3949812 None:intergenic 35.0%
ATACATTCAGGTCAGAGTAA+AGG - chr4.2:3948681-3948700 MS.gene06117:CDS 35.0%
ATATTGCGATGGTTTATTGC+AGG - chr4.2:3948216-3948235 MS.gene06117:intron 35.0%
ATTCTTGTCTTTGATCTTGG+AGG - chr4.2:3949061-3949080 MS.gene06117:intron 35.0%
CAAAGGTCACTTCAATTTGA+GGG + chr4.2:3950348-3950367 None:intergenic 35.0%
CATGATTCTGACTAAGATGA+AGG - chr4.2:3948744-3948763 MS.gene06117:CDS 35.0%
CTTCATCTTAGTCAGAATCA+TGG + chr4.2:3948746-3948765 None:intergenic 35.0%
GAAAAACCAAATCAGTGACA+AGG - chr4.2:3950579-3950598 MS.gene06117:intron 35.0%
GAAAGTAACCAAATTGCATG+AGG + chr4.2:3948852-3948871 None:intergenic 35.0%
GAAGGATTACTTTGATGGAA+AGG - chr4.2:3949647-3949666 MS.gene06117:CDS 35.0%
GGAACAACATATTCATGTGT+TGG - chr4.2:3948312-3948331 MS.gene06117:CDS 35.0%
GGACTTTGATCAGAGAATAA+TGG - chr4.2:3949290-3949309 MS.gene06117:CDS 35.0%
GGCTAGAGTATAGACTATAA+TGG + chr4.2:3949772-3949791 None:intergenic 35.0%
GGTAAACAGCAGTGATAATT+GGG + chr4.2:3950750-3950769 None:intergenic 35.0%
TACAAGATTGTCAACAAGGA+TGG - chr4.2:3948652-3948671 MS.gene06117:CDS 35.0%
TCAAAGGTCACTTCAATTTG+AGG + chr4.2:3950349-3950368 None:intergenic 35.0%
TCCAACAGTTTCAATTCCAA+GGG + chr4.2:3949919-3949938 None:intergenic 35.0%
TCCTTACAAGATTGTCAACA+AGG - chr4.2:3948648-3948667 MS.gene06117:CDS 35.0%
TCCTTGTTGACAATCTTGTA+AGG + chr4.2:3948652-3948671 None:intergenic 35.0%
TGAAGGAAAGAATTGATGCT+CGG - chr4.2:3950527-3950546 MS.gene06117:intron 35.0%
TGCTTCTTTCTTCAGATTTG+AGG - chr4.2:3948594-3948613 MS.gene06117:CDS 35.0%
TGGTAAACAGCAGTGATAAT+TGG + chr4.2:3950751-3950770 None:intergenic 35.0%
TGTAATTCACCAATTCACCT+GGG + chr4.2:3948822-3948841 None:intergenic 35.0%
TTATTCCACTGCATATTGCT+AGG - chr4.2:3950052-3950071 MS.gene06117:CDS 35.0%
TTCTTGTGGTAATTGAACAG+AGG - chr4.2:3950319-3950338 MS.gene06117:intron 35.0%
TTGTAATTCACCAATTCACC+TGG + chr4.2:3948823-3948842 None:intergenic 35.0%
TTTACTCTGACCTGAATGTA+TGG + chr4.2:3948682-3948701 None:intergenic 35.0%
! AACTTGTTCCTCATGCAATT+TGG - chr4.2:3948841-3948860 MS.gene06117:CDS 35.0%
! AGTGATAATTGGGTTGCAAA+CGG + chr4.2:3950740-3950759 None:intergenic 35.0%
! CAAGTTGGAATCAGATGAAA+AGG - chr4.2:3950615-3950634 MS.gene06117:intron 35.0%
! CAATGAGAGAGTGTAATACT+AGG + chr4.2:3949844-3949863 None:intergenic 35.0%
! GATCAAGAAAAAGCATAGCA+AGG - chr4.2:3949329-3949348 MS.gene06117:CDS 35.0%
! TCTAGCCTTTCAATTGCATT+AGG - chr4.2:3949785-3949804 MS.gene06117:intron 35.0%
! TGTGTTGGTGTTTACAAGAA+CGG - chr4.2:3948327-3948346 MS.gene06117:CDS 35.0%
!! ACCTTTGAAGTAGATGCAAA+CGG - chr4.2:3950361-3950380 MS.gene06117:intron 35.0%
!! AGTTGAACAATGACTTGTTC+CGG - chr4.2:3949508-3949527 MS.gene06117:intron 35.0%
!! GCAAACAACTGTTTCTATTC+AGG - chr4.2:3950019-3950038 MS.gene06117:CDS 35.0%
!!! GTTTTCGGGTAATGCTTTTA+TGG - chr4.2:3948133-3948152 MS.gene06117:CDS 35.0%
AAATGTTAGGGCAGAAGACA+AGG - chr4.2:3950390-3950409 MS.gene06117:intron 40.0%
AATAACAGTCCCTAACTTGG+TGG + chr4.2:3948280-3948299 None:intergenic 40.0%
AATAGGTGTTTGAAGGTGAG+AGG - chr4.2:3950151-3950170 MS.gene06117:intron 40.0%
AATCAAAGTTCCCGAGAAGA+CGG + chr4.2:3950194-3950213 None:intergenic 40.0%
AATGTCCTAGCAATATGCAG+TGG + chr4.2:3950060-3950079 None:intergenic 40.0%
AATGTTAGGGCAGAAGACAA+GGG - chr4.2:3950391-3950410 MS.gene06117:intron 40.0%
ACATCAAAGATGGTCCTTTC+AGG + chr4.2:3948468-3948487 None:intergenic 40.0%
ACATCCAAGAGAAGGATATC+TGG + chr4.2:3949885-3949904 None:intergenic 40.0%
ACCAAGTTAGGGACTGTTAT+TGG - chr4.2:3948279-3948298 MS.gene06117:intron 40.0%
ACCCTTGGAATTGAAACTGT+TGG - chr4.2:3949915-3949934 MS.gene06117:CDS 40.0%
ACCGTTTGCATCTACTTCAA+AGG + chr4.2:3950365-3950384 None:intergenic 40.0%
ATAAGTACTCACCTCCAAGA+TGG + chr4.2:3949159-3949178 None:intergenic 40.0%
ATGGAAAGGAACCAAACAAG+GGG - chr4.2:3949661-3949680 MS.gene06117:CDS 40.0%
ATGGTGTGATACGATTTCCT+TGG + chr4.2:3948377-3948396 None:intergenic 40.0%
ATTCAGGTCAGAGTAAAGGA+TGG - chr4.2:3948685-3948704 MS.gene06117:CDS 40.0%
CATCAAAGATGGTCCTTTCA+GGG + chr4.2:3948467-3948486 None:intergenic 40.0%
CCAAGTTAGGGACTGTTATT+GGG - chr4.2:3948280-3948299 MS.gene06117:intron 40.0%
CCATTCAAGTGCTTCTTTCA+CGG + chr4.2:3950656-3950675 None:intergenic 40.0%
CTCCAACAGTTTCAATTCCA+AGG + chr4.2:3949920-3949939 None:intergenic 40.0%
CTTACTTCAATGATGCTCAG+AGG - chr4.2:3948924-3948943 MS.gene06117:CDS 40.0%
CTTCAATTGTTTACCAGGTG+AGG - chr4.2:3949269-3949288 MS.gene06117:CDS 40.0%
CTTCACTTTCTTGTCTTCCT+CGG + chr4.2:3950512-3950531 None:intergenic 40.0%
CTTGGAATTGAAACTGTTGG+AGG - chr4.2:3949918-3949937 MS.gene06117:CDS 40.0%
CTTGTCCAATCCATAAGCAA+TGG + chr4.2:3949023-3949042 None:intergenic 40.0%
GAAATCGTATCACACCATCA+TGG - chr4.2:3948379-3948398 MS.gene06117:CDS 40.0%
GATGAGATTGTTCTTGTTGG+TGG - chr4.2:3949591-3949610 MS.gene06117:CDS 40.0%
GATGGAAAGGAACCAAACAA+GGG - chr4.2:3949660-3949679 MS.gene06117:CDS 40.0%
GCATAGCAAGGATATTAGCA+AGG - chr4.2:3949341-3949360 MS.gene06117:CDS 40.0%
GGATGGAAAACCATACATTC+AGG - chr4.2:3948669-3948688 MS.gene06117:CDS 40.0%
GTATCCAGATATCCTTCTCT+TGG - chr4.2:3949878-3949897 MS.gene06117:CDS 40.0%
GTTTCAATTCCAAGGGTAAG+AGG + chr4.2:3949912-3949931 None:intergenic 40.0%
TAAGTACTCACCTCCAAGAT+GGG + chr4.2:3949158-3949177 None:intergenic 40.0%
TCAACTCTTCAAATCGAGCA+CGG + chr4.2:3949494-3949513 None:intergenic 40.0%
TGATGGAAAGGAACCAAACA+AGG - chr4.2:3949659-3949678 MS.gene06117:CDS 40.0%
TGGGATGTGATTACATGGTT+TGG - chr4.2:3948153-3948172 MS.gene06117:CDS 40.0%
! AAACAGTTGTTTGCTGATCC+TGG + chr4.2:3950013-3950032 None:intergenic 40.0%
! GCGTCCCTTTTCATTTGTAA+TGG + chr4.2:3950440-3950459 None:intergenic 40.0%
! GTTTGTCCTTGTCACTGATT+TGG + chr4.2:3950588-3950607 None:intergenic 40.0%
! TTATCACTGCTGTTTACCAG+AGG - chr4.2:3950752-3950771 MS.gene06117:intron 40.0%
!! GCTTATGGATTGGACAAGAA+AGG - chr4.2:3949025-3949044 MS.gene06117:CDS 40.0%
!! TATGGATTGGACAAGAAAGG+TGG - chr4.2:3949028-3949047 MS.gene06117:CDS 40.0%
!!! AAACACCTGGGATTTTTTGG+TGG + chr4.2:3949982-3950001 None:intergenic 40.0%
!!! AACACCTGGGATTTTTTGGT+GGG + chr4.2:3949981-3950000 None:intergenic 40.0%
!!! GGTAAACACCTGGGATTTTT+TGG + chr4.2:3949985-3950004 None:intergenic 40.0%
!!! TGCAAGGAAGCATTTTGAGT+GGG - chr4.2:3949721-3949740 MS.gene06117:CDS 40.0%
AAAACAAACCTTGGAGCTGG+TGG + chr4.2:3950228-3950247 None:intergenic 45.0%
AAACAAACCTTGGAGCTGGT+GGG + chr4.2:3950227-3950246 None:intergenic 45.0%
ACAAACGGAGATACCCATCT+TGG - chr4.2:3949142-3949161 MS.gene06117:intron 45.0%
ACAAAGGATTGCCGTCTTCT+CGG - chr4.2:3950180-3950199 MS.gene06117:intron 45.0%
ACATCTGCTGCAAAAGAGGA+AGG - chr4.2:3948252-3948271 MS.gene06117:intron 45.0%
ACCGACGATGAGAGATTGAT+TGG - chr4.2:3948411-3948430 MS.gene06117:CDS 45.0%
ACTCAATTTCCACACGGACT+TGG + chr4.2:3949434-3949453 None:intergenic 45.0%
AGTAAAGGATGGTGAGACCA+AGG - chr4.2:3948696-3948715 MS.gene06117:CDS 45.0%
CAAAGGCAACTGCTTCATCA+GGG + chr4.2:3949692-3949711 None:intergenic 45.0%
CAACTCTTCAAATCGAGCAC+GGG + chr4.2:3949493-3949512 None:intergenic 45.0%
CACAAAACAAACCTTGGAGC+TGG + chr4.2:3950231-3950250 None:intergenic 45.0%
CATCTGCTGCAAAAGAGGAA+GGG - chr4.2:3948253-3948272 MS.gene06117:intron 45.0%
CCCAATAACAGTCCCTAACT+TGG + chr4.2:3948283-3948302 None:intergenic 45.0%
CCCAATCAATCTCTCATCGT+CGG + chr4.2:3948415-3948434 None:intergenic 45.0%
CCGACGATGAGAGATTGATT+GGG - chr4.2:3948412-3948431 MS.gene06117:CDS 45.0%
CGACGATGAGAGATTGATTG+GGG - chr4.2:3948413-3948432 MS.gene06117:CDS 45.0%
CGAGGAAGACAAGAAAGTGA+AGG - chr4.2:3950510-3950529 MS.gene06117:intron 45.0%
CTTCTCACCATCATCTCCTT+AGG - chr4.2:3947537-3947556 MS.gene06117:CDS 45.0%
CTTGTCTTTGATCTTGGAGG+TGG - chr4.2:3949064-3949083 MS.gene06117:intron 45.0%
GAAATCATAGCCAACGACCA+AGG - chr4.2:3948357-3948376 MS.gene06117:CDS 45.0%
GATACGATTTCCTTGGTCGT+TGG + chr4.2:3948370-3948389 None:intergenic 45.0%
GTTCAAACCAGCAATGACAC+CGG + chr4.2:3948966-3948985 None:intergenic 45.0%
TCGGTGAAAGAAACCCATGA+TGG + chr4.2:3948396-3948415 None:intergenic 45.0%
TGCAACATCTGCTGCAAAAG+AGG - chr4.2:3948248-3948267 MS.gene06117:intron 45.0%
TGCTGCCATTGCTTATGGAT+TGG - chr4.2:3949015-3949034 MS.gene06117:CDS 45.0%
TGGAAAGGAACCAAACAAGG+GGG - chr4.2:3949662-3949681 MS.gene06117:CDS 45.0%
! AGTTGTTTGCTGATCCTGGT+AGG + chr4.2:3950009-3950028 None:intergenic 45.0%
! CATCACGAATAGTCTTGCCA+AGG + chr4.2:3948786-3948805 None:intergenic 45.0%
! GACTTGTTCCGGAAGACAAT+GGG - chr4.2:3949519-3949538 MS.gene06117:intron 45.0%
! TGGAAGCACAAGGATTCCAA+AGG - chr4.2:3949611-3949630 MS.gene06117:CDS 45.0%
! TTCTTGTTGGTGGAAGCACA+AGG - chr4.2:3949601-3949620 MS.gene06117:CDS 45.0%
!! CCGTGAAAGAAGCACTTGAA+TGG - chr4.2:3950653-3950672 MS.gene06117:intron 45.0%
!! CTCGGGAACTTTGATTTGTC+TGG - chr4.2:3950198-3950217 MS.gene06117:intron 45.0%
!! GAAAGAAGCACTTGAATGGC+TGG - chr4.2:3950657-3950676 MS.gene06117:intron 45.0%
!! GGACAAACTTGCTGACAAGT+TGG - chr4.2:3950600-3950619 MS.gene06117:intron 45.0%
!! TGACTTGTTCCGGAAGACAA+TGG - chr4.2:3949518-3949537 MS.gene06117:intron 45.0%
!! TGTCATTGCTGGTTTGAACG+TGG - chr4.2:3948967-3948986 MS.gene06117:CDS 45.0%
!!! ACACCTGGGATTTTTTGGTG+GGG + chr4.2:3949980-3949999 None:intergenic 45.0%
!!! GCAAGGAAGCATTTTGAGTG+GGG - chr4.2:3949722-3949741 MS.gene06117:CDS 45.0%
!!! GTGCAAGGAAGCATTTTGAG+TGG - chr4.2:3949720-3949739 MS.gene06117:CDS 45.0%
AACGGAGATACCCATCTTGG+AGG - chr4.2:3949145-3949164 MS.gene06117:intron 50.0%
AAGAAGGCAATGGACGATGC+TGG - chr4.2:3949549-3949568 MS.gene06117:CDS 50.0%
AGCACTTGGAAAGCTGAGGA+GGG - chr4.2:3949371-3949390 MS.gene06117:CDS 50.0%
AGGAAGGGACCACCAAGTTA+GGG - chr4.2:3948268-3948287 MS.gene06117:intron 50.0%
AGGTGAGAGGAGTCTCACAA+AGG - chr4.2:3950164-3950183 MS.gene06117:intron 50.0%
ATGGCTCGCTCTTCTTCTTG+CGG - chr4.2:3947504-3947523 MS.gene06117:CDS 50.0%
CAAAGGATTGCCGTCTTCTC+GGG - chr4.2:3950181-3950200 MS.gene06117:intron 50.0%
CAAGACTATTCGTGATGCCG+TGG - chr4.2:3948789-3948808 MS.gene06117:CDS 50.0%
CATCCCCACCAAAAAATCCC+AGG - chr4.2:3949974-3949993 MS.gene06117:CDS 50.0%
CCAAAGGCAACTGCTTCATC+AGG + chr4.2:3949693-3949712 None:intergenic 50.0%
CCTGATGAAGCAGTTGCCTT+TGG - chr4.2:3949690-3949709 MS.gene06117:CDS 50.0%
CGATGAGAGATTGATTGGGG+AGG - chr4.2:3948416-3948435 MS.gene06117:CDS 50.0%
CTCTGATCAAAGTCCTCACC+TGG + chr4.2:3949285-3949304 None:intergenic 50.0%
CTGGCTACTAAGAGCTCTCT+TGG + chr4.2:3949409-3949428 None:intergenic 50.0%
CTGGTAGGTGGTAAACACCT+GGG + chr4.2:3949994-3950013 None:intergenic 50.0%
CTTCAATGATGCTCAGAGGC+AGG - chr4.2:3948928-3948947 MS.gene06117:CDS 50.0%
CTTGCCAAGGAATGCTTCAG+CGG + chr4.2:3948773-3948792 None:intergenic 50.0%
GACAATGGGACCTGTGAAGA+AGG - chr4.2:3949533-3949552 MS.gene06117:CDS 50.0%
GAGGGTGGTGAAGAAACCAA+AGG - chr4.2:3949744-3949763 MS.gene06117:intron 50.0%
GAGGTGCAACATCCAAGAGA+AGG + chr4.2:3949893-3949912 None:intergenic 50.0%
GATGTTGCACCTCTTACCCT+TGG - chr4.2:3949900-3949919 MS.gene06117:CDS 50.0%
GTGGGGATGACAGTGTTTCT+AGG + chr4.2:3949963-3949982 None:intergenic 50.0%
TCAAATCGAGCACGGGTAAG+TGG + chr4.2:3949486-3949505 None:intergenic 50.0%
TCACAGGTCCCATTGTCTTC+CGG + chr4.2:3949530-3949549 None:intergenic 50.0%
TCCATAAGCAATGGCAGCAG+CGG + chr4.2:3949014-3949033 None:intergenic 50.0%
TCGTCCATTGCCTTCTTCAC+AGG + chr4.2:3949546-3949565 None:intergenic 50.0%
TGAGCCAGGAGGAAATTGAC+CGG - chr4.2:3950461-3950480 MS.gene06117:intron 50.0%
! ACAGAGCACTTGGAAAGCTG+AGG - chr4.2:3949367-3949386 MS.gene06117:CDS 50.0%
! ACTGCTGTTTACCAGAGGTC+AGG - chr4.2:3950757-3950776 MS.gene06117:intron 50.0%
! AGCAAGGACAACAGAGCACT+TGG - chr4.2:3949357-3949376 MS.gene06117:CDS 50.0%
! GAAACCGCTGAAGCATTCCT+TGG - chr4.2:3948766-3948785 MS.gene06117:CDS 50.0%
! TGTTTGCTGATCCTGGTAGG+TGG + chr4.2:3950006-3950025 None:intergenic 50.0%
!! ATCATGGCACTGACTTCCTC+AGG + chr4.2:3948730-3948749 None:intergenic 50.0%
!! TCATGGCACTGACTTCCTCA+GGG + chr4.2:3948729-3948748 None:intergenic 50.0%
!! TGAGGGGTGTTGTACTCAAC+CGG - chr4.2:3950106-3950125 MS.gene06117:intron 50.0%
!!! AGGAAGCATTTTGAGTGGGG+AGG - chr4.2:3949725-3949744 MS.gene06117:intron 50.0%
!!! GGAAGCATTTTGAGTGGGGA+GGG - chr4.2:3949726-3949745 MS.gene06117:intron 50.0%
AATGACACCGGCATCCTTGG+TGG + chr4.2:3948954-3948973 None:intergenic 55.0%
ACCGCTGCTGCCATTGCTTA+TGG - chr4.2:3949010-3949029 MS.gene06117:CDS 55.0%
AGCAATGACACCGGCATCCT+TGG + chr4.2:3948957-3948976 None:intergenic 55.0%
ATAAGCAATGGCAGCAGCGG+TGG + chr4.2:3949011-3949030 None:intergenic 55.0%
CCAGGAGGAAATTGACCGGA+TGG - chr4.2:3950465-3950484 MS.gene06117:intron 55.0%
CCAGGTGTTTACCACCTACC+AGG - chr4.2:3949992-3950011 MS.gene06117:CDS 55.0%
CCATCCGGTCAATTTCCTCC+TGG + chr4.2:3950468-3950487 None:intergenic 55.0%
CCTGGTAGGTGGTAAACACC+TGG + chr4.2:3949995-3950014 None:intergenic 55.0%
GAGCACTTGGAAAGCTGAGG+AGG - chr4.2:3949370-3949389 MS.gene06117:CDS 55.0%
GAGGAAGGGACCACCAAGTT+AGG - chr4.2:3948267-3948286 MS.gene06117:intron 55.0%
GCTGTTTACCAGAGGTCAGG+TGG - chr4.2:3950760-3950779 MS.gene06117:intron 55.0%
GGGACCTGTGAAGAAGGCAA+TGG - chr4.2:3949539-3949558 MS.gene06117:CDS 55.0%
GGTCAATTTCCTCCTGGCTC+AGG + chr4.2:3950462-3950481 None:intergenic 55.0%
GGTCACTGTCCCAGGTGAAT+TGG - chr4.2:3948810-3948829 MS.gene06117:CDS 55.0%
GTCTTCCTCGGCAAACTCCT+CGG + chr4.2:3950500-3950519 None:intergenic 55.0%
TAAGCAATGGCAGCAGCGGT+GGG + chr4.2:3949010-3949029 None:intergenic 55.0%
TCAGGGTTGACCCCCTTGTT+TGG + chr4.2:3949675-3949694 None:intergenic 55.0%
TCCTTGCACTGCAGCACCAA+AGG + chr4.2:3949709-3949728 None:intergenic 55.0%
TGGCAGCTGTCAACCCTGAA+AGG - chr4.2:3948451-3948470 MS.gene06117:intron 55.0%
TGGCTCGCTCTTCTTCTTGC+GGG - chr4.2:3947505-3947524 MS.gene06117:CDS 55.0%
TTCACCTGGGACAGTGACCA+CGG + chr4.2:3948809-3948828 None:intergenic 55.0%
TTCCTCAGGGCTGAACACCT+TGG + chr4.2:3948716-3948735 None:intergenic 55.0%
!! AAGGATGCCGGTGTCATTGC+TGG - chr4.2:3948956-3948975 MS.gene06117:CDS 55.0%
!! AGCATTTTGAGTGGGGAGGG+TGG - chr4.2:3949729-3949748 MS.gene06117:intron 55.0%
!! AGGGGTGTTGTACTCAACCG+GGG - chr4.2:3950108-3950127 MS.gene06117:intron 55.0%
!! GAGGGGTGTTGTACTCAACC+GGG - chr4.2:3950107-3950126 MS.gene06117:intron 55.0%
!! TTTCCACACGGACTTGGTGC+TGG + chr4.2:3949428-3949447 None:intergenic 55.0%
AGCTCCAGGTGGTGCATCAG+GGG - chr4.2:3950783-3950802 MS.gene06117:intron 60.0%
CCTCGGCTTCACGAACCATC+CGG + chr4.2:3950483-3950502 None:intergenic 60.0%
CTGGAATCCCACCAGCTCCA+AGG - chr4.2:3950217-3950236 MS.gene06117:intron 60.0%
GAGCTCCAGGTGGTGCATCA+GGG - chr4.2:3950782-3950801 MS.gene06117:intron 60.0%
TAGCCAGCACCAAGTCCGTG+TGG - chr4.2:3949422-3949441 MS.gene06117:intron 60.0%
TGAAAAGGGACGCCTGAGCC+AGG - chr4.2:3950447-3950466 MS.gene06117:intron 60.0%
TGAAGCCGAGGAGTTTGCCG+AGG - chr4.2:3950492-3950511 MS.gene06117:intron 60.0%
TGGGGAGGCTGCGAAGAATC+TGG - chr4.2:3948431-3948450 MS.gene06117:CDS 60.0%
TGGTGCATCAGGGGAAGGAG+AGG - chr4.2:3950792-3950811 MS.gene06117:CDS 60.0%
! AGGGCAGAAGACAAGGGCAC+AGG - chr4.2:3950397-3950416 MS.gene06117:intron 60.0%
! GACCAAGGTGTTCAGCCCTG+AGG - chr4.2:3948711-3948730 MS.gene06117:CDS 60.0%
!! GCCTTTGGTGCTGCAGTGCA+AGG - chr4.2:3949705-3949724 MS.gene06117:CDS 60.0%
AAAGGGACGCCTGAGCCAGG+AGG - chr4.2:3950450-3950469 MS.gene06117:intron 65.0%
AGGCAGGCCACCAAGGATGC+CGG - chr4.2:3948944-3948963 MS.gene06117:CDS 65.0%
AGGTCAGGTGGAGCTCCAGG+TGG - chr4.2:3950772-3950791 MS.gene06117:intron 65.0%
CAGAGGTCAGGTGGAGCTCC+AGG - chr4.2:3950769-3950788 MS.gene06117:intron 65.0%
CCAGGTGGTGCATCAGGGGA+AGG - chr4.2:3950787-3950806 MS.gene06117:intron 65.0%
CCGGATGGTTCGTGAAGCCG+AGG - chr4.2:3950480-3950499 MS.gene06117:intron 65.0%
CCTTCCCCTGATGCACCACC+TGG + chr4.2:3950790-3950809 None:intergenic 65.0%
CTGGAGCTCCACCTGACCTC+TGG + chr4.2:3950771-3950790 None:intergenic 65.0%
GATGCCGTGGTCACTGTCCC+AGG - chr4.2:3948802-3948821 MS.gene06117:CDS 65.0%
GGAGCTCCAGGTGGTGCATC+AGG - chr4.2:3950781-3950800 MS.gene06117:intron 65.0%
TGCTCAGAGGCAGGCCACCA+AGG - chr4.2:3948937-3948956 MS.gene06117:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 3947504 3950846 3947504 ID=MS.gene06117
chr4.2 mRNA 3947504 3950846 3947504 ID=MS.gene06117.t1;Parent=MS.gene06117
chr4.2 exon 3950792 3950846 3950792 ID=MS.gene06117.t1.exon1;Parent=MS.gene06117.t1
chr4.2 CDS 3950792 3950846 3950792 ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1
chr4.2 exon 3949842 3950112 3949842 ID=MS.gene06117.t1.exon2;Parent=MS.gene06117.t1
chr4.2 CDS 3949842 3950112 3949842 ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1
chr4.2 exon 3949527 3949741 3949527 ID=MS.gene06117.t1.exon3;Parent=MS.gene06117.t1
chr4.2 CDS 3949527 3949741 3949527 ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1
chr4.2 exon 3949184 3949426 3949184 ID=MS.gene06117.t1.exon4;Parent=MS.gene06117.t1
chr4.2 CDS 3949184 3949426 3949184 ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1
chr4.2 exon 3948585 3949064 3948585 ID=MS.gene06117.t1.exon5;Parent=MS.gene06117.t1
chr4.2 CDS 3948585 3949064 3948585 ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1
chr4.2 exon 3948310 3948464 3948310 ID=MS.gene06117.t1.exon6;Parent=MS.gene06117.t1
chr4.2 CDS 3948310 3948464 3948310 ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1
chr4.2 exon 3948112 3948194 3948112 ID=MS.gene06117.t1.exon7;Parent=MS.gene06117.t1
chr4.2 CDS 3948112 3948194 3948112 ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1
chr4.2 exon 3947504 3948011 3947504 ID=MS.gene06117.t1.exon8;Parent=MS.gene06117.t1
chr4.2 CDS 3947504 3948011 3947504 ID=cds.MS.gene06117.t1;Parent=MS.gene06117.t1
Gene Sequence

>MS.gene06117

ATGGCTCGCTCTTCTTCTTGCGGGTCTCTGTTTCTTCTCACCATCATCTCCTTAGGTAATTATTACATATCTCACTATCTTCTCTTTATCACTATTCAGATCTTGTTCACCTTTTTTTCTCATTGCTTTTGTTGTTTTAGATCTTTGATTTTATGGATCTGATTAGATCGAGATCTTAACCCTACTTGCATCACATTCTAATTAGTTGTTATTATTATTAAGTAGTTAGTATCAATGAGTAATAGTTTTAATATGCATCTATGCAATCTGCATCTAAGAAACTCAATCGAAAGTGTTTAGTTATTGTTTTGTTTTGAATTTTGTGGAACTGTTATTGTTATGTGTTATTGATTTTCTTATTGCCTTTTAAAGACTGTTAATTAATACAATTACGCGCCGGTTTCTTTGAATCTTAGAAGAAGATGCCAATTAGACCTTTTTATTTGTTTGGATTATCAGTTTTCATGTACAAACAAATGTAATTAATTACATGCTTACTAGTGATTTATTTTACTGGCTTCAAATGGATACATTTTTTTTAATACTCTTGCTTTGATAGCACCATAATCATGTTTTTTCCCGTTTAAGGTTCTATTTGTAATGTTGCCTTTAAATAGTTGATTTATGTTGTTTTCGGGTAATGCTTTTATGGGATGTGATTACATGGTTTGGTTTGACACCGATTTAAATGTTTTGAGTTTTTGTCGTTATAATATTGCGATGGTTTATTGCAGGATGTCTATTTGCAACATCTGCTGCAAAAGAGGAAGGGACCACCAAGTTAGGGACTGTTATTGGGATAGATCTTGGAACAACATATTCATGTGTTGGTGTTTACAAGAACGGACATGTTGAAATCATAGCCAACGACCAAGGAAATCGTATCACACCATCATGGGTTTCTTTCACCGACGATGAGAGATTGATTGGGGAGGCTGCGAAGAATCTGGCAGCTGTCAACCCTGAAAGGACCATCTTTGATGTCAAGAGACTTATCGGAAGAAAGTAAGACATCATTATATATGTTTGCTGTTTATAATGACTAATGATTTGTTATAATTTGATGTAATGGGATCAGTGTTGACTGAGTTGCTTCTTTCTTCAGATTTGAGGATAAGGAAGTTCAAAGAGACATGAAGCTTGTTCCTTACAAGATTGTCAACAAGGATGGAAAACCATACATTCAGGTCAGAGTAAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAGTCAGTGCCATGATTCTGACTAAGATGAAGGAAACCGCTGAAGCATTCCTTGGCAAGACTATTCGTGATGCCGTGGTCACTGTCCCAGGTGAATTGGTGAATTACAACTTGTTCCTCATGCAATTTGGTTACTTTCTTCCCCATTTTGTCTTCATTTTAACATTTCTGGTCTTCTTTTGAATATACAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAACGTGGCTAGAATCATTAATGAACCCACCGCTGCTGCCATTGCTTATGGATTGGACAAGAAAGGTGGAGAGAAGAACATTCTTGTCTTTGATCTTGGAGGTGGAACTTTTGATGTCAGTATCTTGACAATTGACAATGGTGTTTTTGAGGTTCTTTCTACAAACGGAGATACCCATCTTGGAGGTGAGTACTTATATATGTAAAAGAGAAAGAATAAGATTAAATTAAGACAAATTCTACTTGTAAAATTTTACTTCTGTTGTTATTGCTTGCCAAGTGCTAACTCTTCAATTGTTTACCAGGTGAGGACTTTGATCAGAGAATAATGGAGTACTTCATTAAATTGATCAAGAAAAAGCATAGCAAGGATATTAGCAAGGACAACAGAGCACTTGGAAAGCTGAGGAGGGAGAGTGAGCGTGCCAAGAGAGCTCTTAGTAGCCAGCACCAAGTCCGTGTGGAAATTGAGTCACTTTTTGATGGCGTTGATTTCTCTGAGCCACTTACCCGTGCTCGATTTGAAGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGACCTGTGAAGAAGGCAATGGACGATGCTGGATTACAGAAGAATCAAATTGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTACAACAACTTTTGAAGGATTACTTTGATGGAAAGGAACCAAACAAGGGGGTCAACCCTGATGAAGCAGTTGCCTTTGGTGCTGCAGTGCAAGGAAGCATTTTGAGTGGGGAGGGTGGTGAAGAAACCAAAGGTACCATTATAGTCTATACTCTAGCCTTTCAATTGCATTAGGTAGCTATTATTTGTTATTGATGCAAGTAGGTTTCCTAGTATTACACTCTCTCATTGTTGTGCTATTCTGTGTATCCAGATATCCTTCTCTTGGATGTTGCACCTCTTACCCTTGGAATTGAAACTGTTGGAGGAGTGATGACAAAGTTGATTCCTAGAAACACTGTCATCCCCACCAAAAAATCCCAGGTGTTTACCACCTACCAGGATCAGCAAACAACTGTTTCTATTCAGGTACTGTACCATTATTCCACTGCATATTGCTAGGACATTTTCCTTCTAAATACAATATTGTGTAATGAGGGGTGTTGTACTCAACCGGGGTGTTGTCTGTTTTTATTATGAATAGGTGTTTGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGTCTTCTCGGGAACTTTGATTTGTCTGGAATCCCACCAGCTCCAAGGTTTGTTTTGTGATATCATAATGTCTTCTATGAACTTTCTCTATTGGTGTTTGTATTCTAATTAATTGATTAATCAATTTTTCTTGTGGTAATTGAACAGAGGTACCCCTCAAATTGAAGTGACCTTTGAAGTAGATGCAAACGGTATTCTAAATGTTAGGGCAGAAGACAAGGGCACAGGTAAATCAGAAAAGATCACCATTACAAATGAAAAGGGACGCCTGAGCCAGGAGGAAATTGACCGGATGGTTCGTGAAGCCGAGGAGTTTGCCGAGGAAGACAAGAAAGTGAAGGAAAGAATTGATGCTCGGAATGCTCTTGAAACCTATGTCTACAACATGAAAAACCAAATCAGTGACAAGGACAAACTTGCTGACAAGTTGGAATCAGATGAAAAGGAAAAAATTGAGGCTGCCGTGAAAGAAGCACTTGAATGGCTGGATGACAACCAAACTGTTGAGAAAGAAGAGTTTGAAGAGAAGCTTAAAGAAGTTGAAGCCGTTTGCAACCCAATTATCACTGCTGTTTACCAGAGGTCAGGTGGAGCTCCAGGTGGTGCATCAGGGGAAGGAGAGGATGAAGATGAAGACTCTCGCGACGAGCTCTAG

Protein sequence

>MS.gene06117.t1

MARSSSCGSLFLLTIISLGCLFATSAAKEEGTTKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVSFTDDERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVRVKDGETKVFSPEEVSAMILTKMKETAEAFLGKTIRDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHSKDISKDNRALGKLRRESERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGNFDLSGIPPAPRGTPQIEVTFEVDANGILNVRAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNALETYVYNMKNQISDKDKLADKLESDEKEKIEAAVKEALEWLDDNQTVEKEEFEEKLKEVEAVCNPIITAVYQRSGGAPGGASGEGEDEDEDSRDEL