Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92118.t1 | XP_013444751.1 | 58.5 | 364 | 10 | 2 | 1 | 223 | 1 | 364 | 7.60E-106 | 393.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92118.t1 | Q9LTH7 | 34.7 | 354 | 83 | 4 | 17 | 223 | 14 | 366 | 1.1e-49 | 198.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92118.t1 | A0A072TNJ4 | 58.5 | 364 | 10 | 2 | 1 | 223 | 1 | 364 | 5.5e-106 | 393.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055150 | MS.gene92118 | 0.817272 | 3.59E-52 | -1.69E-46 |
MS.gene057472 | MS.gene92118 | 0.800459 | 1.43E-48 | -1.69E-46 |
MS.gene059436 | MS.gene92118 | 0.814596 | 1.42E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92118.t1 | MTR_8g028435 | 77.326 | 172 | 8 | 1 | 1 | 141 | 1 | 172 | 4.78e-88 | 264 |
MS.gene92118.t1 | MTR_8g028435 | 93.103 | 87 | 6 | 0 | 137 | 223 | 278 | 364 | 6.27e-51 | 169 |
MS.gene92118.t1 | MTR_8g008930 | 66.848 | 184 | 29 | 1 | 1 | 152 | 1 | 184 | 4.60e-81 | 246 |
MS.gene92118.t1 | MTR_8g008930 | 82.759 | 87 | 15 | 0 | 137 | 223 | 279 | 365 | 1.38e-42 | 147 |
MS.gene92118.t1 | MTR_8g009090 | 70.930 | 172 | 19 | 1 | 1 | 141 | 1 | 172 | 6.74e-80 | 243 |
MS.gene92118.t1 | MTR_8g009090 | 81.609 | 87 | 16 | 0 | 137 | 223 | 278 | 364 | 7.77e-43 | 148 |
MS.gene92118.t1 | MTR_8g009160 | 70.349 | 172 | 20 | 1 | 1 | 141 | 1 | 172 | 9.21e-79 | 241 |
MS.gene92118.t1 | MTR_8g009160 | 82.759 | 87 | 15 | 0 | 137 | 223 | 278 | 364 | 3.18e-43 | 149 |
MS.gene92118.t1 | MTR_4g117880 | 65.318 | 173 | 28 | 1 | 1 | 141 | 1 | 173 | 5.80e-76 | 233 |
MS.gene92118.t1 | MTR_4g117880 | 71.591 | 88 | 24 | 1 | 137 | 223 | 279 | 366 | 1.21e-34 | 127 |
MS.gene92118.t1 | MTR_8g009110 | 68.786 | 173 | 22 | 2 | 1 | 141 | 1 | 173 | 9.44e-75 | 230 |
MS.gene92118.t1 | MTR_8g009110 | 87.356 | 87 | 11 | 0 | 137 | 223 | 279 | 365 | 7.84e-47 | 158 |
MS.gene92118.t1 | MTR_8g009120 | 66.667 | 177 | 27 | 2 | 1 | 145 | 1 | 177 | 6.01e-73 | 225 |
MS.gene92118.t1 | MTR_8g009120 | 87.013 | 77 | 10 | 0 | 147 | 223 | 277 | 353 | 7.91e-40 | 140 |
MS.gene92118.t1 | MTR_8g009150 | 67.052 | 173 | 25 | 2 | 1 | 141 | 1 | 173 | 6.87e-72 | 222 |
MS.gene92118.t1 | MTR_8g009150 | 79.310 | 87 | 18 | 0 | 137 | 223 | 259 | 345 | 1.63e-41 | 144 |
MS.gene92118.t1 | MTR_8g009170 | 62.903 | 186 | 37 | 2 | 1 | 154 | 1 | 186 | 2.01e-71 | 219 |
MS.gene92118.t1 | MTR_8g009170 | 62.903 | 186 | 37 | 2 | 1 | 154 | 1 | 186 | 8.12e-71 | 220 |
MS.gene92118.t1 | MTR_8g009170 | 80.682 | 88 | 16 | 1 | 137 | 223 | 279 | 366 | 1.78e-40 | 142 |
MS.gene92118.t1 | MTR_2g069090 | 56.522 | 161 | 35 | 3 | 15 | 141 | 20 | 179 | 4.14e-50 | 167 |
MS.gene92118.t1 | MTR_2g069090 | 73.563 | 87 | 23 | 0 | 137 | 223 | 286 | 372 | 5.97e-37 | 133 |
MS.gene92118.t1 | MTR_2g069210 | 50.811 | 185 | 55 | 4 | 2 | 152 | 4 | 186 | 7.08e-50 | 166 |
MS.gene92118.t1 | MTR_2g069210 | 72.414 | 87 | 24 | 0 | 137 | 223 | 281 | 367 | 9.99e-38 | 135 |
MS.gene92118.t1 | MTR_2g069190 | 54.037 | 161 | 39 | 3 | 15 | 141 | 20 | 179 | 3.33e-48 | 162 |
MS.gene92118.t1 | MTR_2g069190 | 78.161 | 87 | 19 | 0 | 137 | 223 | 285 | 371 | 1.35e-39 | 140 |
MS.gene92118.t1 | MTR_2g069300 | 48.256 | 172 | 54 | 3 | 15 | 152 | 6 | 176 | 5.82e-47 | 159 |
MS.gene92118.t1 | MTR_2g069300 | 64.368 | 87 | 31 | 0 | 137 | 223 | 272 | 358 | 2.67e-33 | 123 |
MS.gene92118.t1 | MTR_8g009180 | 79.310 | 87 | 18 | 0 | 137 | 223 | 208 | 294 | 2.84e-40 | 139 |
MS.gene92118.t1 | MTR_1g043770 | 45.806 | 155 | 52 | 3 | 19 | 142 | 11 | 164 | 3.23e-38 | 135 |
MS.gene92118.t1 | MTR_1g043770 | 57.471 | 87 | 37 | 0 | 137 | 223 | 269 | 355 | 1.85e-28 | 110 |
MS.gene92118.t1 | MTR_1g043770 | 45.806 | 155 | 52 | 3 | 19 | 142 | 11 | 164 | 3.45e-38 | 134 |
MS.gene92118.t1 | MTR_8g009080 | 46.835 | 158 | 49 | 4 | 16 | 139 | 47 | 203 | 6.06e-38 | 134 |
MS.gene92118.t1 | MTR_1g043760 | 44.025 | 159 | 56 | 3 | 15 | 141 | 7 | 164 | 1.09e-37 | 134 |
MS.gene92118.t1 | MTR_1g043760 | 52.326 | 86 | 41 | 0 | 137 | 222 | 270 | 355 | 1.53e-20 | 88.6 |
MS.gene92118.t1 | MTR_8g009080 | 46.835 | 158 | 49 | 4 | 16 | 139 | 47 | 203 | 1.12e-37 | 134 |
MS.gene92118.t1 | MTR_8g009080 | 46.835 | 158 | 49 | 4 | 16 | 139 | 47 | 203 | 2.19e-37 | 134 |
MS.gene92118.t1 | MTR_8g009080 | 72.414 | 87 | 24 | 0 | 137 | 223 | 311 | 397 | 2.92e-36 | 131 |
MS.gene92118.t1 | MTR_1g043775 | 41.520 | 171 | 66 | 3 | 15 | 152 | 7 | 176 | 4.87e-36 | 129 |
MS.gene92118.t1 | MTR_1g043775 | 41.520 | 171 | 66 | 3 | 15 | 152 | 7 | 176 | 9.82e-36 | 129 |
MS.gene92118.t1 | MTR_1g043775 | 55.172 | 87 | 39 | 0 | 137 | 223 | 271 | 357 | 4.24e-26 | 103 |
MS.gene92118.t1 | MTR_1g044105 | 38.922 | 167 | 63 | 3 | 15 | 143 | 7 | 172 | 2.22e-34 | 121 |
MS.gene92118.t1 | MTR_1g043810 | 39.181 | 171 | 70 | 3 | 15 | 152 | 7 | 176 | 8.98e-34 | 124 |
MS.gene92118.t1 | MTR_1g043810 | 39.181 | 171 | 70 | 3 | 15 | 152 | 7 | 176 | 1.46e-33 | 124 |
MS.gene92118.t1 | MTR_1g043810 | 55.172 | 87 | 39 | 0 | 137 | 223 | 271 | 357 | 2.46e-27 | 107 |
MS.gene92118.t1 | MTR_8g008960 | 70.270 | 74 | 22 | 0 | 150 | 223 | 29 | 102 | 1.75e-32 | 114 |
MS.gene92118.t1 | MTR_1g093140 | 39.053 | 169 | 56 | 5 | 15 | 139 | 17 | 182 | 1.88e-30 | 115 |
MS.gene92118.t1 | MTR_1g093140 | 53.933 | 89 | 39 | 1 | 137 | 223 | 290 | 378 | 3.60e-24 | 99.0 |
MS.gene92118.t1 | MTR_1g093120 | 35.625 | 160 | 65 | 4 | 17 | 139 | 18 | 176 | 2.39e-28 | 110 |
MS.gene92118.t1 | MTR_1g093120 | 56.322 | 87 | 38 | 0 | 137 | 223 | 284 | 370 | 2.04e-26 | 105 |
MS.gene92118.t1 | MTR_8g469400 | 56.667 | 90 | 36 | 1 | 137 | 223 | 271 | 360 | 2.69e-28 | 109 |
MS.gene92118.t1 | MTR_8g469400 | 33.333 | 156 | 58 | 6 | 17 | 139 | 22 | 164 | 1.38e-16 | 77.8 |
MS.gene92118.t1 | MTR_0032s0040 | 59.091 | 88 | 35 | 1 | 137 | 223 | 286 | 373 | 3.60e-28 | 109 |
MS.gene92118.t1 | MTR_0032s0040 | 31.507 | 219 | 98 | 5 | 1 | 173 | 1 | 213 | 2.51e-21 | 91.3 |
MS.gene92118.t1 | MTR_7g056347 | 57.778 | 90 | 35 | 1 | 137 | 223 | 284 | 373 | 4.82e-28 | 109 |
MS.gene92118.t1 | MTR_7g056347 | 36.478 | 159 | 63 | 4 | 16 | 139 | 21 | 176 | 3.80e-26 | 104 |
MS.gene92118.t1 | MTR_7g056393 | 57.778 | 90 | 35 | 1 | 137 | 223 | 284 | 373 | 6.91e-28 | 108 |
MS.gene92118.t1 | MTR_7g056393 | 31.138 | 167 | 77 | 4 | 17 | 148 | 22 | 185 | 1.34e-19 | 86.3 |
MS.gene92118.t1 | MTR_8g062600 | 55.556 | 90 | 37 | 1 | 137 | 223 | 284 | 373 | 8.23e-28 | 108 |
MS.gene92118.t1 | MTR_8g062600 | 34.568 | 162 | 62 | 5 | 16 | 139 | 21 | 176 | 1.41e-24 | 100 |
MS.gene92118.t1 | MTR_4g024660 | 56.667 | 90 | 36 | 1 | 137 | 223 | 284 | 373 | 9.50e-28 | 108 |
MS.gene92118.t1 | MTR_4g024660 | 34.615 | 156 | 68 | 5 | 17 | 139 | 22 | 176 | 6.08e-24 | 98.2 |
MS.gene92118.t1 | MTR_8g041600 | 61.798 | 89 | 31 | 2 | 137 | 223 | 287 | 374 | 1.11e-27 | 108 |
MS.gene92118.t1 | MTR_8g041600 | 37.654 | 162 | 62 | 4 | 17 | 141 | 22 | 181 | 5.83e-25 | 101 |
MS.gene92118.t1 | MTR_2g069060 | 60.920 | 87 | 31 | 2 | 137 | 223 | 266 | 349 | 5.49e-27 | 106 |
MS.gene92118.t1 | MTR_2g069060 | 32.258 | 155 | 57 | 3 | 16 | 139 | 21 | 158 | 2.45e-15 | 73.9 |
MS.gene92118.t1 | MTR_8g006930 | 57.778 | 90 | 35 | 1 | 137 | 223 | 284 | 373 | 5.55e-27 | 106 |
MS.gene92118.t1 | MTR_8g006930 | 35.443 | 158 | 64 | 4 | 17 | 139 | 22 | 176 | 4.43e-25 | 101 |
MS.gene92118.t1 | MTR_2g069010 | 60.440 | 91 | 31 | 2 | 137 | 223 | 286 | 375 | 1.03e-26 | 105 |
MS.gene92118.t1 | MTR_2g069010 | 32.704 | 159 | 71 | 4 | 16 | 139 | 21 | 178 | 3.42e-21 | 90.9 |
MS.gene92118.t1 | MTR_4g119410 | 57.778 | 90 | 35 | 1 | 137 | 223 | 284 | 373 | 1.08e-26 | 105 |
MS.gene92118.t1 | MTR_4g119410 | 35.443 | 158 | 64 | 4 | 17 | 139 | 22 | 176 | 4.48e-25 | 101 |
MS.gene92118.t1 | MTR_1g093110 | 35.976 | 164 | 61 | 5 | 17 | 139 | 19 | 179 | 2.21e-26 | 104 |
MS.gene92118.t1 | MTR_1g093110 | 54.545 | 88 | 39 | 1 | 137 | 223 | 287 | 374 | 2.29e-25 | 102 |
MS.gene92118.t1 | MTR_7g029655 | 57.143 | 91 | 34 | 3 | 137 | 223 | 281 | 370 | 2.34e-26 | 104 |
MS.gene92118.t1 | MTR_7g029655 | 35.152 | 165 | 65 | 3 | 15 | 141 | 15 | 175 | 5.35e-23 | 95.5 |
MS.gene92118.t1 | MTR_8g041620 | 58.427 | 89 | 34 | 2 | 137 | 223 | 287 | 374 | 2.90e-26 | 104 |
MS.gene92118.t1 | MTR_8g041620 | 37.037 | 162 | 63 | 4 | 17 | 141 | 22 | 181 | 6.42e-24 | 98.2 |
MS.gene92118.t1 | MTR_8g041600 | 37.654 | 162 | 62 | 4 | 17 | 141 | 22 | 181 | 2.05e-25 | 101 |
MS.gene92118.t1 | MTR_7g078010 | 35.443 | 158 | 64 | 4 | 17 | 139 | 22 | 176 | 5.23e-25 | 100 |
MS.gene92118.t1 | MTR_2g068950 | 58.242 | 91 | 33 | 2 | 137 | 223 | 280 | 369 | 6.75e-25 | 100 |
MS.gene92118.t1 | MTR_2g068950 | 31.915 | 188 | 88 | 6 | 1 | 150 | 1 | 186 | 1.07e-21 | 92.0 |
MS.gene92118.t1 | MTR_7g078010 | 35.443 | 158 | 64 | 4 | 17 | 139 | 22 | 176 | 1.33e-24 | 100 |
MS.gene92118.t1 | MTR_7g078010 | 50.000 | 90 | 42 | 1 | 137 | 223 | 284 | 373 | 1.01e-21 | 92.0 |
MS.gene92118.t1 | MTR_2g068960 | 56.044 | 91 | 35 | 2 | 137 | 223 | 280 | 369 | 1.38e-24 | 100 |
MS.gene92118.t1 | MTR_2g068960 | 32.447 | 188 | 87 | 6 | 1 | 150 | 1 | 186 | 5.84e-21 | 90.1 |
MS.gene92118.t1 | MTR_4g099390 | 53.571 | 84 | 37 | 1 | 142 | 223 | 1 | 84 | 2.23e-24 | 92.4 |
MS.gene92118.t1 | MTR_8g063070 | 32.584 | 178 | 83 | 6 | 1 | 142 | 3 | 179 | 2.57e-24 | 99.4 |
MS.gene92118.t1 | MTR_8g063070 | 54.444 | 90 | 38 | 1 | 137 | 223 | 284 | 373 | 2.30e-22 | 94.0 |
MS.gene92118.t1 | MTR_1g070185 | 55.172 | 87 | 36 | 1 | 137 | 223 | 284 | 367 | 1.11e-23 | 97.4 |
MS.gene92118.t1 | MTR_1g070185 | 29.341 | 167 | 87 | 1 | 17 | 152 | 23 | 189 | 2.63e-18 | 82.8 |
MS.gene92118.t1 | MTR_4g099380 | 34.161 | 161 | 59 | 5 | 19 | 141 | 129 | 280 | 7.81e-23 | 94.0 |
MS.gene92118.t1 | MTR_2g069020 | 33.962 | 159 | 69 | 4 | 16 | 139 | 19 | 176 | 3.28e-22 | 93.6 |
MS.gene92118.t1 | MTR_2g069020 | 50.588 | 85 | 38 | 3 | 137 | 219 | 284 | 366 | 3.08e-18 | 82.4 |
MS.gene92118.t1 | MTR_2g069020 | 33.962 | 159 | 69 | 4 | 16 | 139 | 19 | 176 | 5.85e-22 | 93.2 |
MS.gene92118.t1 | MTR_2g069020 | 50.588 | 85 | 38 | 3 | 137 | 219 | 284 | 366 | 5.06e-18 | 82.0 |
MS.gene92118.t1 | MTR_1g043840 | 32.444 | 225 | 104 | 6 | 19 | 205 | 11 | 225 | 7.26e-21 | 89.4 |
MS.gene92118.t1 | MTR_1g043840 | 61.364 | 44 | 17 | 0 | 71 | 114 | 256 | 299 | 3.34e-12 | 65.1 |
MS.gene92118.t1 | MTR_7g056353 | 55.056 | 89 | 37 | 1 | 137 | 222 | 258 | 346 | 8.21e-21 | 90.5 |
MS.gene92118.t1 | MTR_7g056370 | 33.544 | 158 | 65 | 5 | 18 | 139 | 2 | 155 | 9.41e-21 | 87.0 |
MS.gene92118.t1 | MTR_7g105070 | 31.373 | 153 | 73 | 2 | 19 | 139 | 15 | 167 | 6.28e-20 | 87.0 |
MS.gene92118.t1 | MTR_7g105070 | 37.500 | 88 | 54 | 1 | 137 | 223 | 275 | 362 | 2.21e-12 | 65.9 |
MS.gene92118.t1 | MTR_2g069070 | 31.169 | 154 | 58 | 3 | 16 | 138 | 21 | 157 | 3.20e-15 | 71.6 |
MS.gene92118.t1 | MTR_7g068650 | 31.544 | 149 | 65 | 4 | 19 | 130 | 6 | 154 | 4.27e-15 | 73.6 |
MS.gene92118.t1 | MTR_1g032220 | 41.379 | 87 | 48 | 2 | 137 | 222 | 287 | 371 | 4.40e-14 | 70.5 |
MS.gene92118.t1 | MTR_1g032220 | 29.487 | 156 | 71 | 3 | 19 | 139 | 28 | 179 | 1.11e-13 | 69.3 |
MS.gene92118.t1 | MTR_2g068800 | 36.134 | 119 | 59 | 4 | 27 | 131 | 21 | 136 | 5.90e-14 | 69.7 |
MS.gene92118.t1 | MTR_1g032140 | 29.487 | 156 | 71 | 3 | 19 | 139 | 21 | 172 | 8.23e-14 | 69.7 |
MS.gene92118.t1 | MTR_1g032140 | 42.529 | 87 | 47 | 2 | 137 | 222 | 280 | 364 | 9.69e-14 | 69.7 |
MS.gene92118.t1 | MTR_1g032250 | 28.070 | 171 | 83 | 4 | 4 | 139 | 14 | 179 | 8.37e-14 | 69.7 |
MS.gene92118.t1 | MTR_1g032250 | 41.860 | 86 | 46 | 3 | 137 | 221 | 287 | 369 | 8.17e-13 | 67.0 |
MS.gene92118.t1 | MTR_2g068850 | 40.698 | 86 | 47 | 2 | 27 | 111 | 21 | 103 | 2.80e-13 | 67.0 |
MS.gene92118.t1 | MTR_2g068840 | 41.176 | 85 | 46 | 2 | 27 | 110 | 21 | 102 | 3.92e-12 | 65.1 |
MS.gene92118.t1 | MTR_3g091350 | 35.185 | 108 | 54 | 3 | 4 | 108 | 13 | 107 | 1.89e-11 | 63.2 |
MS.gene92118.t1 | MTR_7g037530 | 34.559 | 136 | 59 | 6 | 1 | 135 | 1 | 107 | 2.81e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92118.t1 | AT5G59540 | 42.197 | 173 | 62 | 3 | 17 | 152 | 14 | 185 | 1.03e-37 | 133 |
MS.gene92118.t1 | AT5G59540 | 42.197 | 173 | 62 | 3 | 17 | 152 | 14 | 185 | 2.94e-37 | 134 |
MS.gene92118.t1 | AT5G59540 | 60.920 | 87 | 34 | 0 | 137 | 223 | 280 | 366 | 1.15e-28 | 110 |
MS.gene92118.t1 | AT1G06650 | 68.182 | 88 | 27 | 1 | 137 | 223 | 282 | 369 | 5.44e-34 | 125 |
MS.gene92118.t1 | AT1G06650 | 42.236 | 161 | 56 | 3 | 16 | 139 | 14 | 174 | 1.94e-33 | 124 |
MS.gene92118.t1 | AT1G06640 | 41.071 | 168 | 61 | 4 | 9 | 139 | 8 | 174 | 6.78e-34 | 124 |
MS.gene92118.t1 | AT1G06640 | 41.615 | 161 | 57 | 3 | 16 | 139 | 14 | 174 | 7.53e-34 | 123 |
MS.gene92118.t1 | AT1G06650 | 42.236 | 161 | 56 | 3 | 16 | 139 | 14 | 174 | 8.36e-34 | 123 |
MS.gene92118.t1 | AT1G06640 | 41.071 | 168 | 61 | 4 | 9 | 139 | 8 | 174 | 1.56e-33 | 124 |
MS.gene92118.t1 | AT1G06640 | 61.364 | 88 | 33 | 1 | 137 | 223 | 282 | 369 | 9.33e-28 | 108 |
MS.gene92118.t1 | AT5G59530 | 42.236 | 161 | 52 | 4 | 17 | 139 | 13 | 170 | 4.72e-33 | 122 |
MS.gene92118.t1 | AT5G59530 | 62.069 | 87 | 33 | 0 | 137 | 223 | 278 | 364 | 2.03e-28 | 110 |
MS.gene92118.t1 | AT1G04350 | 37.714 | 175 | 69 | 3 | 16 | 154 | 10 | 180 | 2.25e-32 | 120 |
MS.gene92118.t1 | AT1G04350 | 60.227 | 88 | 34 | 1 | 137 | 223 | 273 | 360 | 1.83e-24 | 99.8 |
MS.gene92118.t1 | AT1G06645 | 65.909 | 88 | 29 | 1 | 137 | 223 | 292 | 379 | 3.09e-31 | 118 |
MS.gene92118.t1 | AT1G06645 | 40.625 | 160 | 57 | 4 | 9 | 131 | 21 | 179 | 1.18e-28 | 111 |
MS.gene92118.t1 | AT1G06620 | 40.385 | 156 | 58 | 3 | 19 | 140 | 18 | 172 | 4.27e-31 | 115 |
MS.gene92118.t1 | AT1G06620 | 60.920 | 87 | 34 | 0 | 137 | 223 | 279 | 365 | 1.23e-30 | 116 |
MS.gene92118.t1 | AT1G06620 | 40.385 | 156 | 58 | 3 | 19 | 140 | 18 | 172 | 1.32e-30 | 116 |
MS.gene92118.t1 | AT1G04380 | 59.770 | 87 | 35 | 0 | 137 | 223 | 259 | 345 | 5.47e-29 | 111 |
MS.gene92118.t1 | AT1G04380 | 33.758 | 157 | 55 | 4 | 16 | 140 | 13 | 152 | 1.37e-20 | 89.0 |
MS.gene92118.t1 | AT2G30840 | 37.500 | 160 | 64 | 3 | 16 | 139 | 9 | 168 | 2.13e-28 | 109 |
MS.gene92118.t1 | AT1G03410 | 37.423 | 163 | 64 | 3 | 16 | 141 | 8 | 169 | 2.25e-28 | 110 |
MS.gene92118.t1 | AT1G03410 | 47.727 | 88 | 44 | 2 | 137 | 223 | 275 | 361 | 9.53e-18 | 80.9 |
MS.gene92118.t1 | AT1G03410 | 37.423 | 163 | 64 | 3 | 16 | 141 | 45 | 206 | 2.58e-28 | 110 |
MS.gene92118.t1 | AT1G03410 | 47.727 | 88 | 44 | 2 | 137 | 223 | 312 | 398 | 1.52e-17 | 80.9 |
MS.gene92118.t1 | AT5G43440 | 40.361 | 166 | 55 | 6 | 15 | 140 | 11 | 172 | 2.66e-28 | 108 |
MS.gene92118.t1 | AT2G30840 | 37.500 | 160 | 64 | 3 | 16 | 139 | 9 | 168 | 3.69e-28 | 109 |
MS.gene92118.t1 | AT2G30840 | 58.228 | 79 | 31 | 2 | 146 | 223 | 279 | 356 | 3.93e-18 | 82.0 |
MS.gene92118.t1 | AT2G30840 | 37.500 | 160 | 64 | 3 | 16 | 139 | 9 | 168 | 3.99e-28 | 109 |
MS.gene92118.t1 | AT2G30840 | 57.955 | 88 | 35 | 2 | 137 | 223 | 276 | 362 | 1.65e-21 | 91.7 |
MS.gene92118.t1 | AT5G43440 | 40.361 | 166 | 55 | 6 | 15 | 140 | 11 | 172 | 9.58e-28 | 108 |
MS.gene92118.t1 | AT5G43440 | 55.172 | 87 | 39 | 0 | 137 | 223 | 279 | 365 | 2.69e-23 | 96.3 |
MS.gene92118.t1 | AT2G30830 | 38.217 | 157 | 65 | 2 | 17 | 141 | 10 | 166 | 2.36e-27 | 107 |
MS.gene92118.t1 | AT2G30830 | 53.535 | 99 | 37 | 3 | 133 | 223 | 261 | 358 | 3.68e-22 | 93.2 |
MS.gene92118.t1 | AT5G43450 | 34.270 | 178 | 70 | 5 | 15 | 152 | 11 | 181 | 3.28e-27 | 105 |
MS.gene92118.t1 | AT5G43450 | 36.145 | 166 | 59 | 5 | 15 | 140 | 11 | 169 | 8.13e-27 | 105 |
MS.gene92118.t1 | AT5G43450 | 52.874 | 87 | 41 | 0 | 137 | 223 | 276 | 362 | 7.31e-21 | 89.7 |
MS.gene92118.t1 | AT3G61400 | 36.970 | 165 | 62 | 4 | 15 | 139 | 12 | 174 | 1.79e-26 | 103 |
MS.gene92118.t1 | AT3G61400 | 36.970 | 165 | 62 | 4 | 15 | 139 | 12 | 174 | 2.94e-26 | 104 |
MS.gene92118.t1 | AT3G61400 | 54.545 | 88 | 38 | 2 | 137 | 223 | 284 | 370 | 3.48e-23 | 96.3 |
MS.gene92118.t1 | AT2G25450 | 38.217 | 157 | 63 | 3 | 16 | 139 | 9 | 164 | 4.29e-26 | 103 |
MS.gene92118.t1 | AT2G25450 | 52.000 | 100 | 38 | 4 | 133 | 223 | 261 | 359 | 1.83e-19 | 85.9 |
MS.gene92118.t1 | AT1G03400 | 36.196 | 163 | 56 | 5 | 16 | 141 | 8 | 159 | 4.40e-22 | 92.8 |
MS.gene92118.t1 | AT1G03400 | 52.273 | 88 | 40 | 2 | 137 | 223 | 265 | 351 | 1.61e-18 | 83.2 |
MS.gene92118.t1 | AT1G03400 | 36.196 | 163 | 56 | 5 | 16 | 141 | 8 | 159 | 6.69e-22 | 92.8 |
MS.gene92118.t1 | AT1G03400 | 53.571 | 84 | 37 | 2 | 141 | 223 | 297 | 379 | 2.68e-18 | 82.8 |
MS.gene92118.t1 | AT1G04380 | 33.758 | 157 | 55 | 4 | 16 | 140 | 13 | 152 | 6.71e-21 | 88.6 |
MS.gene92118.t1 | AT3G13610 | 41.379 | 87 | 40 | 3 | 27 | 109 | 26 | 105 | 9.14e-12 | 63.9 |
MS.gene92118.t1 | AT3G13610 | 40.964 | 83 | 46 | 1 | 141 | 223 | 282 | 361 | 6.84e-11 | 61.2 |
MS.gene92118.t1 | AT3G12900 | 38.554 | 83 | 50 | 1 | 27 | 109 | 21 | 102 | 2.38e-11 | 62.8 |
MS.gene92118.t1 | AT1G55290 | 37.931 | 87 | 44 | 3 | 27 | 109 | 25 | 105 | 4.77e-11 | 62.0 |
Find 44 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTGTGGTTTCTCTGTATA+TGG | 0.213587 | 8.3:+65040673 | None:intergenic |
TCTGATAAGAGTTCCTTTAT+AGG | 0.228376 | 8.3:+65040707 | None:intergenic |
ATAGCTCACCAGCACTTAAT+TGG | 0.240215 | 8.3:-65043128 | MS.gene92118:intron |
GAAACAAAAGCTGGTGTAAA+AGG | 0.285364 | 8.3:-65043492 | MS.gene92118:CDS |
TCTTCTGGTTTGGGAGTATC+AGG | 0.295482 | 8.3:+65043078 | None:intergenic |
ATCAGGTTGATGATGGAATA+AGG | 0.321050 | 8.3:+65043437 | None:intergenic |
CACAGGAATATCTTCTGGTT+TGG | 0.328301 | 8.3:+65043068 | None:intergenic |
TAGGCTAACTCATATTTATC+AGG | 0.330157 | 8.3:+65043420 | None:intergenic |
AAACATGCAACAGATATTCT+TGG | 0.354935 | 8.3:+65040770 | None:intergenic |
AATAACATGGCTTGTGTTGT+AGG | 0.361872 | 8.3:+65043401 | None:intergenic |
AAAGCTCTATGGACCTATAA+AGG | 0.376551 | 8.3:-65040720 | MS.gene92118:CDS |
AGGTCATCCTCAAAGCTCTA+TGG | 0.378756 | 8.3:-65040731 | MS.gene92118:CDS |
ACAGGAATATCTTCTGGTTT+GGG | 0.384567 | 8.3:+65043069 | None:intergenic |
TTTGAAGCAAAAGGACTAGA+TGG | 0.395430 | 8.3:-65040632 | MS.gene92118:CDS |
CATACCACAGGAATATCTTC+TGG | 0.404518 | 8.3:+65043063 | None:intergenic |
CATATTTATCAGGTTGATGA+TGG | 0.411678 | 8.3:+65043430 | None:intergenic |
GTTAGGCTTGTTTGTATCAG+TGG | 0.449425 | 8.3:+65043551 | None:intergenic |
GTTCTTGAGGATTTGAAAGA+TGG | 0.455408 | 8.3:-65043249 | MS.gene92118:CDS |
TATAGGTCCATAGAGCTTTG+AGG | 0.468817 | 8.3:+65040724 | None:intergenic |
ATTTGAAAGATGGTGTTAAG+AGG | 0.479834 | 8.3:-65043239 | MS.gene92118:intron |
GTTCATTCAATATAGAATCA+AGG | 0.486469 | 8.3:+65043529 | None:intergenic |
CTTTATTATCAATATCTACA+AGG | 0.487201 | 8.3:+65043367 | None:intergenic |
GGTTGATGATGGAATAAGGT+AGG | 0.489286 | 8.3:+65043441 | None:intergenic |
TTCAATATAGAATCAAGGTT+AGG | 0.490953 | 8.3:+65043534 | None:intergenic |
GGTGTAAAAGGACTTGTTGA+TGG | 0.518526 | 8.3:-65043480 | MS.gene92118:CDS |
GTATCTCTCCAATTAAGTGC+TGG | 0.524725 | 8.3:+65043120 | None:intergenic |
TGAAGGAAGCATGTGAAACA+TGG | 0.532384 | 8.3:-65043311 | MS.gene92118:CDS |
AATCCCTTTGAGTGTTCTTG+AGG | 0.532394 | 8.3:-65043262 | MS.gene92118:CDS |
GAACACTCAAAGGGATTCCA+TGG | 0.540454 | 8.3:+65043268 | None:intergenic |
AAATCCTCAAGAACACTCAA+AGG | 0.548795 | 8.3:+65043258 | None:intergenic |
AATCCTCAAGAACACTCAAA+GGG | 0.552395 | 8.3:+65043259 | None:intergenic |
ACTGTGGTTTCTCTGTATAT+GGG | 0.553741 | 8.3:+65040674 | None:intergenic |
GCATTTGATGAAACAAAAGC+TGG | 0.578863 | 8.3:-65043501 | MS.gene92118:CDS |
ATATCTACAAGGTCTATGAC+AGG | 0.583641 | 8.3:+65043378 | None:intergenic |
GTTGATGATGGAATAAGGTA+GGG | 0.587595 | 8.3:+65043442 | None:intergenic |
AGAGTTCTTGCAAATCATGT+TGG | 0.595761 | 8.3:-65040794 | MS.gene92118:CDS |
GAAGGAAGCATGTGAAACAT+GGG | 0.600229 | 8.3:-65043310 | MS.gene92118:CDS |
GTGGTTTCTCTGTATATGGG+AGG | 0.613663 | 8.3:+65040677 | None:intergenic |
CTTGAAATGTGTAAGAGCAG+AGG | 0.627743 | 8.3:+65040607 | None:intergenic |
GGCTACATAGTCAGCAACTG+TGG | 0.638100 | 8.3:+65040658 | None:intergenic |
GGTCTATGACAGGAATAACA+TGG | 0.683113 | 8.3:+65043388 | None:intergenic |
AAGGAAGCATGTGAAACATG+GGG | 0.690006 | 8.3:-65043309 | MS.gene92118:CDS |
GTAAAAGGACTTGTTGATGG+AGG | 0.724997 | 8.3:-65043477 | MS.gene92118:CDS |
CAAACCAGAAGATATTCCTG+TGG | 0.734477 | 8.3:-65043067 | MS.gene92118:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr8.3:65041760-65041779 | MS.gene92118:intron | 10.0% |
!! | TTAAGTTAAATACTTAAATT+TGG | - | chr8.3:65041359-65041378 | MS.gene92118:intron | 10.0% |
!!! | AAGTAAATTTTTTTTTTGTA+GGG | - | chr8.3:65041823-65041842 | MS.gene92118:intron | 10.0% |
!!! | AATCAGTTTTTTATTTTTTT+AGG | + | chr8.3:65042270-65042289 | None:intergenic | 10.0% |
!!! | TAAGTAAATTTTTTTTTTGT+AGG | - | chr8.3:65041822-65041841 | MS.gene92118:intron | 10.0% |
!! | AAAGCTATTAAAATTAAGTA+AGG | - | chr8.3:65041852-65041871 | MS.gene92118:intron | 15.0% |
!! | AAGCATAAATTAAACAAATT+TGG | + | chr8.3:65041512-65041531 | None:intergenic | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | + | chr8.3:65041440-65041459 | None:intergenic | 15.0% |
!! | TAAGATATAAGTAACAAAAA+TGG | + | chr8.3:65041631-65041650 | None:intergenic | 15.0% |
!!! | AAACAAAATTTATTTTAGCA+GGG | - | chr8.3:65041789-65041808 | MS.gene92118:intron | 15.0% |
!!! | AAATACTTAAATTTGGTTTT+GGG | - | chr8.3:65041366-65041385 | MS.gene92118:intron | 15.0% |
!!! | TAAACAAAATTTATTTTAGC+AGG | - | chr8.3:65041788-65041807 | MS.gene92118:intron | 15.0% |
!!! | TAAATACTTAAATTTGGTTT+TGG | - | chr8.3:65041365-65041384 | MS.gene92118:intron | 15.0% |
!! | AAACAAATTTGGATTGAATA+AGG | + | chr8.3:65041501-65041520 | None:intergenic | 20.0% |
!! | CTAACTGATAGAAATATAAA+AGG | - | chr8.3:65042226-65042245 | MS.gene92118:intron | 20.0% |
!! | CTTAAATAAGATGAAAGATA+GGG | + | chr8.3:65043073-65043092 | None:intergenic | 20.0% |
!! | CTTTATTATCAATATCTACA+AGG | + | chr8.3:65040795-65040814 | None:intergenic | 20.0% |
!! | TAAAAACATATTTAACCCTT+TGG | - | chr8.3:65041908-65041927 | MS.gene92118:intron | 20.0% |
!! | TTTATATACTCTTTCAACTT+TGG | - | chr8.3:65041146-65041165 | MS.gene92118:intron | 20.0% |
!!! | AATTTTCGCGATATTTTTAT+CGG | + | chr8.3:65041596-65041615 | None:intergenic | 20.0% |
!!! | AGATACTTTTATATGTTACT+TGG | - | chr8.3:65041056-65041075 | MS.gene92118:intron | 20.0% |
!!! | ATGATTTTGATTAGACATTT+AGG | + | chr8.3:65042976-65042995 | None:intergenic | 20.0% |
!!! | GTTTTTCAACAATTTTTTAC+AGG | - | chr8.3:65041542-65041561 | MS.gene92118:intron | 20.0% |
!!! | TTTCTAGTTATAACATGAAA+AGG | + | chr8.3:65042175-65042194 | None:intergenic | 20.0% |
! | AAAAATTGTTGACAAAGTGA+AGG | - | chr8.3:65040831-65040850 | MS.gene92118:CDS | 25.0% |
! | AAGATTTGTATACTAGAGAT+AGG | - | chr8.3:65040971-65040990 | MS.gene92118:intron | 25.0% |
! | AAGTAAGGACTAAATTTACA+AGG | + | chr8.3:65041425-65041444 | None:intergenic | 25.0% |
! | AAGTTCTTTATCAGGATAAA+TGG | - | chr8.3:65042550-65042569 | MS.gene92118:intron | 25.0% |
! | AATCAATTCTTCAAAATCTC+AGG | + | chr8.3:65042777-65042796 | None:intergenic | 25.0% |
! | AATCTTAGTTAACTGTCTAA+TGG | - | chr8.3:65042837-65042856 | MS.gene92118:intron | 25.0% |
! | AGAGATATATTGCTAGAATA+TGG | - | chr8.3:65042306-65042325 | MS.gene92118:intron | 25.0% |
! | AGTAAAATTGAATGTAACCA+TGG | + | chr8.3:65041255-65041274 | None:intergenic | 25.0% |
! | ATCAATTCTTCAAAATCTCA+GGG | + | chr8.3:65042776-65042795 | None:intergenic | 25.0% |
! | ATTTATCCTGATAAAGAACT+TGG | + | chr8.3:65042551-65042570 | None:intergenic | 25.0% |
! | CCTTAAATAAGATGAAAGAT+AGG | + | chr8.3:65043074-65043093 | None:intergenic | 25.0% |
! | GAAAATACATGAGAAATCTA+GGG | - | chr8.3:65042328-65042347 | MS.gene92118:intron | 25.0% |
! | GTGTTAAGAACGTTATTAAA+AGG | - | chr8.3:65041566-65041585 | MS.gene92118:intron | 25.0% |
! | GTTCATTCAATATAGAATCA+AGG | + | chr8.3:65040633-65040652 | None:intergenic | 25.0% |
! | TAGTCATTGATGCAAAATTA+TGG | - | chr8.3:65042706-65042725 | MS.gene92118:intron | 25.0% |
! | TGAACAAATTGAAGAAACAA+CGG | - | chr8.3:65041940-65041959 | MS.gene92118:intron | 25.0% |
! | TGTTCAAATAGAAAACCAAA+GGG | + | chr8.3:65041926-65041945 | None:intergenic | 25.0% |
! | TTCAATATAGAATCAAGGTT+AGG | + | chr8.3:65040628-65040647 | None:intergenic | 25.0% |
! | TTGTTCAAATAGAAAACCAA+AGG | + | chr8.3:65041927-65041946 | None:intergenic | 25.0% |
!! | AGAGAAAATGTTGTTTGTAT+CGG | - | chr8.3:65042090-65042109 | MS.gene92118:intron | 25.0% |
!! | CCTATCTTTCATCTTATTTA+AGG | - | chr8.3:65043071-65043090 | MS.gene92118:CDS | 25.0% |
!!! | ACAATTTTTTGGTGAATACT+TGG | + | chr8.3:65040820-65040839 | None:intergenic | 25.0% |
!!! | TCACTTTGTCAACAATTTTT+TGG | + | chr8.3:65040831-65040850 | None:intergenic | 25.0% |
!!! | TTTTATTTGTTGTTGTGTGA+AGG | - | chr8.3:65043254-65043273 | MS.gene92118:CDS | 25.0% |
!!! | TTTTGGGTTAATTATGTTCT+TGG | - | chr8.3:65041382-65041401 | MS.gene92118:intron | 25.0% |
AAACAAACGATTATCGCATT+AGG | + | chr8.3:65043236-65043255 | None:intergenic | 30.0% | |
AAACATGCAACAGATATTCT+TGG | + | chr8.3:65043392-65043411 | None:intergenic | 30.0% | |
AAGTAAGGACTAAACTTAGA+AGG | - | chr8.3:65041867-65041886 | MS.gene92118:intron | 30.0% | |
AATTAGTCCTATCCATTTGA+GGG | + | chr8.3:65043173-65043192 | None:intergenic | 30.0% | |
ATTAAATAACCAAACTGCTG+AGG | - | chr8.3:65042866-65042885 | MS.gene92118:intron | 30.0% | |
GAAATCATTATCAGAATGCT+TGG | + | chr8.3:65042493-65042512 | None:intergenic | 30.0% | |
GATTAAATAGAACTCTCATG+TGG | + | chr8.3:65042207-65042226 | None:intergenic | 30.0% | |
GGAAAATACATGAGAAATCT+AGG | - | chr8.3:65042327-65042346 | MS.gene92118:intron | 30.0% | |
TAATTAGTCCTATCCATTTG+AGG | + | chr8.3:65043174-65043193 | None:intergenic | 30.0% | |
TAGGCTAACTCATATTTATC+AGG | + | chr8.3:65040742-65040761 | None:intergenic | 30.0% | |
TCCAAACCATCTAAAAGATA+TGG | - | chr8.3:65042392-65042411 | MS.gene92118:intron | 30.0% | |
TCGTCCAAAACTACTAAAAT+AGG | - | chr8.3:65042936-65042955 | MS.gene92118:intron | 30.0% | |
TCTGATAAGAGTTCCTTTAT+AGG | + | chr8.3:65043455-65043474 | None:intergenic | 30.0% | |
! | ATTAGACATTTAGGTTTGCA+CGG | + | chr8.3:65042967-65042986 | None:intergenic | 30.0% |
! | ATTTGAAAGATGGTGTTAAG+AGG | - | chr8.3:65040920-65040939 | MS.gene92118:intron | 30.0% |
! | CACAATCCATATCTTTTAGA+TGG | + | chr8.3:65042401-65042420 | None:intergenic | 30.0% |
! | TAGAAGGTCGCAATTTTATA+GGG | - | chr8.3:65041883-65041902 | MS.gene92118:intron | 30.0% |
! | TAGTCCTTTTGCTTCAAAAT+AGG | + | chr8.3:65043525-65043544 | None:intergenic | 30.0% |
! | TCCATATCTTTTAGATGGTT+TGG | + | chr8.3:65042396-65042415 | None:intergenic | 30.0% |
! | TTAGAAGGTCGCAATTTTAT+AGG | - | chr8.3:65041882-65041901 | MS.gene92118:intron | 30.0% |
!! | AAATCATCATTGTGCTGTTT+CGG | - | chr8.3:65042989-65043008 | MS.gene92118:intron | 30.0% |
!! | CATATTTATCAGGTTGATGA+TGG | + | chr8.3:65040732-65040751 | None:intergenic | 30.0% |
!!! | ACTACTCTTTTTTGGCATTT+AGG | - | chr8.3:65042809-65042828 | MS.gene92118:intron | 30.0% |
!!! | GAGTGCAGAAATTTTTTGTA+GGG | + | chr8.3:65041469-65041488 | None:intergenic | 30.0% |
!!! | GTGTCCTATTTTAGTAGTTT+TGG | + | chr8.3:65042943-65042962 | None:intergenic | 30.0% |
!!! | TGAGTGCAGAAATTTTTTGT+AGG | + | chr8.3:65041470-65041489 | None:intergenic | 30.0% |
!!! | TTTTTTCAGGTTGTTAACCA+TGG | - | chr8.3:65040874-65040893 | MS.gene92118:intron | 30.0% |
AAAGCTCTATGGACCTATAA+AGG | - | chr8.3:65043439-65043458 | MS.gene92118:CDS | 35.0% | |
AAATCCTCAAGAACACTCAA+AGG | + | chr8.3:65040904-65040923 | None:intergenic | 35.0% | |
AACTGTGGTTTCTCTGTATA+TGG | + | chr8.3:65043489-65043508 | None:intergenic | 35.0% | |
AATCCTCAAGAACACTCAAA+GGG | + | chr8.3:65040903-65040922 | None:intergenic | 35.0% | |
ACTGTGGTTTCTCTGTATAT+GGG | + | chr8.3:65043488-65043507 | None:intergenic | 35.0% | |
AGAGTTCTTGCAAATCATGT+TGG | - | chr8.3:65043365-65043384 | MS.gene92118:CDS | 35.0% | |
ATATCTACAAGGTCTATGAC+AGG | + | chr8.3:65040784-65040803 | None:intergenic | 35.0% | |
CATAAACTTGATCCCTCAAA+TGG | - | chr8.3:65043158-65043177 | MS.gene92118:intron | 35.0% | |
GAAACAAAAGCTGGTGTAAA+AGG | - | chr8.3:65040667-65040686 | MS.gene92118:CDS | 35.0% | |
GAACTATTGTCAGAAGCTTT+AGG | - | chr8.3:65042363-65042382 | MS.gene92118:intron | 35.0% | |
GCAATGTAAGCAACATTAGA+GGG | + | chr8.3:65043118-65043137 | None:intergenic | 35.0% | |
GCATTTGATGAAACAAAAGC+TGG | - | chr8.3:65040658-65040677 | MS.gene92118:CDS | 35.0% | |
GTTCTTGAGGATTTGAAAGA+TGG | - | chr8.3:65040910-65040929 | MS.gene92118:intron | 35.0% | |
TAATGTTGGAGATCTATTGC+AGG | - | chr8.3:65042608-65042627 | MS.gene92118:intron | 35.0% | |
TATCCTGATAAAGAACTTGG+AGG | + | chr8.3:65042548-65042567 | None:intergenic | 35.0% | |
TGCAATGTAAGCAACATTAG+AGG | + | chr8.3:65043119-65043138 | None:intergenic | 35.0% | |
! | AAAGATATGGATTGTGCTGA+AGG | - | chr8.3:65042405-65042424 | MS.gene92118:intron | 35.0% |
! | AATAACATGGCTTGTGTTGT+AGG | + | chr8.3:65040761-65040780 | None:intergenic | 35.0% |
! | ATGCCTACAATTTAAAGCGT+TGG | + | chr8.3:65041190-65041209 | None:intergenic | 35.0% |
! | CAAGTTTAGAACACTATGAC+AGG | + | chr8.3:65041726-65041745 | None:intergenic | 35.0% |
! | GTGAAGCACTAACATATACA+AGG | + | chr8.3:65041334-65041353 | None:intergenic | 35.0% |
! | TACAAGGTCGCAATTTTGTA+GGG | + | chr8.3:65041409-65041428 | None:intergenic | 35.0% |
! | TTACAAGGTCGCAATTTTGT+AGG | + | chr8.3:65041410-65041429 | None:intergenic | 35.0% |
! | TTTGAAGCAAAAGGACTAGA+TGG | - | chr8.3:65043527-65043546 | MS.gene92118:CDS | 35.0% |
!! | ACAGGAATATCTTCTGGTTT+GGG | + | chr8.3:65041093-65041112 | None:intergenic | 35.0% |
!! | ATCAGGTTGATGATGGAATA+AGG | + | chr8.3:65040725-65040744 | None:intergenic | 35.0% |
!! | GTTGATGATGGAATAAGGTA+GGG | + | chr8.3:65040720-65040739 | None:intergenic | 35.0% |
!! | TGTTAAGAGGTTTTATGAGC+AGG | - | chr8.3:65040933-65040952 | MS.gene92118:intron | 35.0% |
!! | TTTCGCGATATTTTTATCGG+AGG | + | chr8.3:65041593-65041612 | None:intergenic | 35.0% |
!!! | GAGAGCAAACTACTCTTTTT+TGG | - | chr8.3:65042801-65042820 | MS.gene92118:intron | 35.0% |
!!! | GTAGCCTATTTTGAAGCAAA+AGG | - | chr8.3:65043518-65043537 | MS.gene92118:CDS | 35.0% |
!!! | TGAAACATGGGGATTTTTTC+AGG | - | chr8.3:65040861-65040880 | MS.gene92118:intron | 35.0% |
AAGATATTCCTGTGGTATGC+AGG | - | chr8.3:65041100-65041119 | MS.gene92118:intron | 40.0% | |
AATAACCAAACTGCTGAGGT+AGG | - | chr8.3:65042870-65042889 | MS.gene92118:intron | 40.0% | |
AATCCCTTTGAGTGTTCTTG+AGG | - | chr8.3:65040897-65040916 | MS.gene92118:intron | 40.0% | |
ACATTAACTATGAGAGCTCC+AGG | + | chr8.3:65042594-65042613 | None:intergenic | 40.0% | |
ACGACACTAATATTGTCACG+TGG | + | chr8.3:65041302-65041321 | None:intergenic | 40.0% | |
ACTTGATCCCTCAAATGGAT+AGG | - | chr8.3:65043163-65043182 | MS.gene92118:intron | 40.0% | |
ATAACCAAACTGCTGAGGTA+GGG | - | chr8.3:65042871-65042890 | MS.gene92118:intron | 40.0% | |
ATAGCTCACCAGCACTTAAT+TGG | - | chr8.3:65041031-65041050 | MS.gene92118:intron | 40.0% | |
ATGTCTAGCATGTGTCCTAT+CGG | - | chr8.3:65041215-65041234 | MS.gene92118:intron | 40.0% | |
ATTGACATTACACCTGTTCC+TGG | - | chr8.3:65042573-65042592 | MS.gene92118:intron | 40.0% | |
CAAACCAGAAGATATTCCTG+TGG | - | chr8.3:65041092-65041111 | MS.gene92118:intron | 40.0% | |
CAGAATGACTCACTTTATCG+TGG | - | chr8.3:65042912-65042931 | MS.gene92118:intron | 40.0% | |
CAGGACAAGGAGGATAATAA+TGG | + | chr8.3:65042446-65042465 | None:intergenic | 40.0% | |
CATACCACAGGAATATCTTC+TGG | + | chr8.3:65041099-65041118 | None:intergenic | 40.0% | |
CTAATATTGTCACGTGGACA+CGG | + | chr8.3:65041296-65041315 | None:intergenic | 40.0% | |
CTTGAAATGTGTAAGAGCAG+AGG | + | chr8.3:65043555-65043574 | None:intergenic | 40.0% | |
GGAGCTCTCATAGTTAATGT+TGG | - | chr8.3:65042594-65042613 | MS.gene92118:intron | 40.0% | |
GGTCTATGACAGGAATAACA+TGG | + | chr8.3:65040774-65040793 | None:intergenic | 40.0% | |
GTATCTCTCCAATTAAGTGC+TGG | + | chr8.3:65041042-65041061 | None:intergenic | 40.0% | |
TATAGGTCCATAGAGCTTTG+AGG | + | chr8.3:65043438-65043457 | None:intergenic | 40.0% | |
! | AAGGAAGCATGTGAAACATG+GGG | - | chr8.3:65040850-65040869 | MS.gene92118:intron | 40.0% |
! | CACAGGAATATCTTCTGGTT+TGG | + | chr8.3:65041094-65041113 | None:intergenic | 40.0% |
! | GAAGGAAGCATGTGAAACAT+GGG | - | chr8.3:65040849-65040868 | MS.gene92118:intron | 40.0% |
! | GCACCAACGCTTTAAATTGT+AGG | - | chr8.3:65041184-65041203 | MS.gene92118:intron | 40.0% |
! | GTTAGGCTTGTTTGTATCAG+TGG | + | chr8.3:65040611-65040630 | None:intergenic | 40.0% |
! | TGAAGGAAGCATGTGAAACA+TGG | - | chr8.3:65040848-65040867 | MS.gene92118:intron | 40.0% |
!! | GGTGTAAAAGGACTTGTTGA+TGG | - | chr8.3:65040679-65040698 | MS.gene92118:CDS | 40.0% |
!! | GGTTGATGATGGAATAAGGT+AGG | + | chr8.3:65040721-65040740 | None:intergenic | 40.0% |
!! | GTAAAAGGACTTGTTGATGG+AGG | - | chr8.3:65040682-65040701 | MS.gene92118:CDS | 40.0% |
!!! | GTTGCATGTTTTTTCTGCAC+AGG | - | chr8.3:65043401-65043420 | MS.gene92118:CDS | 40.0% |
!!! | GTTTTTTCTGCACAGGTCAT+AGG | - | chr8.3:65043408-65043427 | MS.gene92118:CDS | 40.0% |
AGGTCATCCTCAAAGCTCTA+TGG | - | chr8.3:65043428-65043447 | MS.gene92118:CDS | 45.0% | |
ATAGAGTGACCTTTGCTACC+AGG | + | chr8.3:65041989-65042008 | None:intergenic | 45.0% | |
CCTGAACCAGAATTGACTGT+GGG | - | chr8.3:65042462-65042481 | MS.gene92118:intron | 45.0% | |
CTGCCACGATCCATTGAATT+GGG | + | chr8.3:65041966-65041985 | None:intergenic | 45.0% | |
CTTCTCCAAGACCATATTGG+CGG | - | chr8.3:65042522-65042541 | MS.gene92118:intron | 45.0% | |
GAAACAACGGCCCAATTCAA+TGG | - | chr8.3:65041953-65041972 | MS.gene92118:intron | 45.0% | |
GAACACTCAAAGGGATTCCA+TGG | + | chr8.3:65040894-65040913 | None:intergenic | 45.0% | |
GTGCTTCTCCAAGACCATAT+TGG | - | chr8.3:65042519-65042538 | MS.gene92118:intron | 45.0% | |
GTGGTTTCTCTGTATATGGG+AGG | + | chr8.3:65043485-65043504 | None:intergenic | 45.0% | |
GTTGTTCCCACAGTCAATTC+TGG | + | chr8.3:65042471-65042490 | None:intergenic | 45.0% | |
TACACATACCTGCATACCAC+AGG | + | chr8.3:65041111-65041130 | None:intergenic | 45.0% | |
TCCTGAACCAGAATTGACTG+TGG | - | chr8.3:65042461-65042480 | MS.gene92118:intron | 45.0% | |
!! | AATTCTGGTTCAGGACAAGG+AGG | + | chr8.3:65042456-65042475 | None:intergenic | 45.0% |
!! | ATGTAACCATGGTGTCGTGT+TGG | + | chr8.3:65041244-65041263 | None:intergenic | 45.0% |
!! | GTCAATTCTGGTTCAGGACA+AGG | + | chr8.3:65042459-65042478 | None:intergenic | 45.0% |
!! | TCTTCTGGTTTGGGAGTATC+AGG | + | chr8.3:65041084-65041103 | None:intergenic | 45.0% |
!! | AATTAATATATCTTAAAATA+AGG | + | chr8.3:65042133-65042152 | None:intergenic | 5.0% |
ACTATGAGAGCTCCAGGAAC+AGG | + | chr8.3:65042588-65042607 | None:intergenic | 50.0% | |
CGGCCTCCAAGTTCTTTATC+AGG | - | chr8.3:65042542-65042561 | MS.gene92118:intron | 50.0% | |
GCTGCCACGATCCATTGAAT+TGG | + | chr8.3:65041967-65041986 | None:intergenic | 50.0% | |
GGCTACATAGTCAGCAACTG+TGG | + | chr8.3:65043504-65043523 | None:intergenic | 50.0% | |
!! | CCCACAGTCAATTCTGGTTC+AGG | + | chr8.3:65042465-65042484 | None:intergenic | 50.0% |
AGCTCCCTACCTCAGCAGTT+TGG | + | chr8.3:65042878-65042897 | None:intergenic | 55.0% | |
CGGCCCAATTCAATGGATCG+TGG | - | chr8.3:65041960-65041979 | MS.gene92118:intron | 55.0% | |
GAACTTGGAGGCCGCCAATA+TGG | + | chr8.3:65042536-65042555 | None:intergenic | 55.0% | |
TTCAATGGATCGTGGCAGCC+TGG | - | chr8.3:65041968-65041987 | MS.gene92118:intron | 55.0% | |
! | GGTCTTGGAGAAGCACAGTG+AGG | + | chr8.3:65042515-65042534 | None:intergenic | 55.0% |
! | GTGTCGTGTTGGTGTCCGAT+AGG | + | chr8.3:65041233-65041252 | None:intergenic | 55.0% |
CGGACACCAACACGACACCA+TGG | - | chr8.3:65041235-65041254 | MS.gene92118:intron | 60.0% | |
GGAGGCCGCCAATATGGTCT+TGG | + | chr8.3:65042530-65042549 | None:intergenic | 60.0% | |
TCGTGGCAGCCTGGTAGCAA+AGG | - | chr8.3:65041977-65041996 | MS.gene92118:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 65040601 | 65043580 | 65040601 | ID=MS.gene92118 |
chr8.3 | mRNA | 65040601 | 65043580 | 65040601 | ID=MS.gene92118.t1;Parent=MS.gene92118 |
chr8.3 | exon | 65043240 | 65043580 | 65043240 | ID=MS.gene92118.t1.exon1;Parent=MS.gene92118.t1 |
chr8.3 | CDS | 65043240 | 65043580 | 65043240 | ID=cds.MS.gene92118.t1;Parent=MS.gene92118.t1 |
chr8.3 | exon | 65043068 | 65043146 | 65043068 | ID=MS.gene92118.t1.exon2;Parent=MS.gene92118.t1 |
chr8.3 | CDS | 65043068 | 65043146 | 65043068 | ID=cds.MS.gene92118.t1;Parent=MS.gene92118.t1 |
chr8.3 | exon | 65040601 | 65040852 | 65040601 | ID=MS.gene92118.t1.exon3;Parent=MS.gene92118.t1 |
chr8.3 | CDS | 65040601 | 65040852 | 65040601 | ID=cds.MS.gene92118.t1;Parent=MS.gene92118.t1 |
Gene Sequence |
Protein sequence |