Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92224.t1 | XP_013447464.1 | 94.2 | 191 | 11 | 0 | 1 | 191 | 1 | 191 | 5.60E-98 | 367.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92224.t1 | Q8LFP9 | 63.5 | 148 | 53 | 1 | 44 | 191 | 31 | 177 | 8.6e-47 | 188.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92224.t1 | G7ZY14 | 94.2 | 191 | 11 | 0 | 1 | 191 | 1 | 191 | 4.0e-98 | 367.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050324 | MS.gene92224 | 0.801413 | 9.11E-49 | -1.69E-46 |
| MS.gene050959 | MS.gene92224 | 0.822929 | 1.82E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene92224 | 0.826316 | 2.90E-54 | -1.69E-46 |
| MS.gene056584 | MS.gene92224 | 0.827421 | 1.58E-54 | -1.69E-46 |
| MS.gene057054 | MS.gene92224 | 0.807718 | 4.41E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene92224 | 0.800134 | 1.66E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92224.t1 | MTR_7g007280 | 89.320 | 206 | 20 | 1 | 1 | 206 | 1 | 204 | 1.18e-131 | 370 |
| MS.gene92224.t1 | MTR_6g025680 | 59.906 | 212 | 72 | 5 | 1 | 206 | 1 | 205 | 7.01e-77 | 231 |
| MS.gene92224.t1 | MTR_6g018550 | 58.962 | 212 | 70 | 4 | 1 | 206 | 1 | 201 | 1.90e-75 | 227 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92224.t1 | AT1G67080 | 63.514 | 148 | 53 | 1 | 44 | 191 | 31 | 177 | 5.82e-62 | 192 |
| MS.gene92224.t1 | AT1G67080 | 56.303 | 119 | 51 | 1 | 44 | 162 | 31 | 148 | 4.24e-42 | 140 |
Find 39 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTTGCTGTGCCTTTCT+TGG | 0.147302 | 7.1:-87087415 | MS.gene92224:CDS |
| CTCTGCTTGGATTCACCTTT+TGG | 0.175390 | 7.1:-87087202 | MS.gene92224:CDS |
| AAAATCAATCGAACTGTTTC+AGG | 0.185668 | 7.1:+87087389 | None:intergenic |
| AAACGTACCAGATCGGATTT+TGG | 0.231509 | 7.1:+87087657 | None:intergenic |
| CCAGCAATAACGAGGAAAAT+TGG | 0.233130 | 7.1:+87087124 | None:intergenic |
| CGAACCGATCTTGTAGCTTT+TGG | 0.236227 | 7.1:+87088617 | None:intergenic |
| AAGGGTTGTACCTTATTAAA+TGG | 0.248376 | 7.1:+87089603 | None:intergenic |
| TTCACCATTACCATTTAATA+AGG | 0.254760 | 7.1:-87089613 | MS.gene92224:intron |
| AGTGGAGATTGGAGTTTCAT+AGG | 0.317626 | 7.1:-87088662 | MS.gene92224:CDS |
| GATTCAGTTTAAGTGGAGAT+TGG | 0.341492 | 7.1:-87088673 | MS.gene92224:CDS |
| CTCAATGTTGCAGGGTTCAT+AGG | 0.368762 | 7.1:-87087756 | MS.gene92224:intron |
| AGAAGTAGATTCAGTTTAAG+TGG | 0.379934 | 7.1:-87088680 | MS.gene92224:CDS |
| TCTACTTCTCGAAATGTGTT+TGG | 0.403637 | 7.1:+87088694 | None:intergenic |
| CAGCAATAACGAGGAAAATT+GGG | 0.423899 | 7.1:+87087125 | None:intergenic |
| TTCCTAGCACTGTATTTACA+TGG | 0.448057 | 7.1:-87087725 | MS.gene92224:CDS |
| AGTTGACTTTAGCCTCTGCT+TGG | 0.453787 | 7.1:-87087215 | MS.gene92224:CDS |
| GAACCATAAGGGTGTAAAAC+GGG | 0.460581 | 7.1:+87087685 | None:intergenic |
| TGTACCTTATTAAATGGTAA+TGG | 0.465204 | 7.1:+87089609 | None:intergenic |
| CCTTTCTCTATCAGGAGTGA+TGG | 0.472888 | 7.1:-87088722 | MS.gene92224:CDS |
| TAAAACTCTGTAGGACAGTT+GGG | 0.479095 | 7.1:-87088763 | MS.gene92224:CDS |
| GAAATCACAAAAGATACAAC+AGG | 0.485634 | 7.1:+87087155 | None:intergenic |
| ATAAAACTCTGTAGGACAGT+TGG | 0.510520 | 7.1:-87088764 | MS.gene92224:CDS |
| CTGTTTCAGGTGTCCAAGAA+AGG | 0.512995 | 7.1:+87087402 | None:intergenic |
| AGAATGCCGAGCACTACATA+TGG | 0.521426 | 7.1:+87087443 | None:intergenic |
| CCATCACTCCTGATAGAGAA+AGG | 0.526576 | 7.1:+87088722 | None:intergenic |
| TCTAGCCCCAAAATCCGATC+TGG | 0.530853 | 7.1:-87087664 | MS.gene92224:intron |
| CCCCATGTAAATACAGTGCT+AGG | 0.554898 | 7.1:+87087723 | None:intergenic |
| TCCTAGCACTGTATTTACAT+GGG | 0.556570 | 7.1:-87087724 | MS.gene92224:CDS |
| TCCTTGCAGCTTTCTAGCAT+AGG | 0.568671 | 7.1:-87087255 | MS.gene92224:intron |
| AGAACCATAAGGGTGTAAAA+CGG | 0.570175 | 7.1:+87087684 | None:intergenic |
| AGTTTACCATATGTAGTGCT+CGG | 0.572021 | 7.1:-87087449 | MS.gene92224:CDS |
| CAGAAAGAAACGTACCAGAT+CGG | 0.600587 | 7.1:+87087650 | None:intergenic |
| GGAGATTGGAGTTTCATAGG+AGG | 0.615543 | 7.1:-87088659 | MS.gene92224:CDS |
| CCTAGCACTGTATTTACATG+GGG | 0.616641 | 7.1:-87087723 | MS.gene92224:CDS |
| GAGATTGGAGTTTCATAGGA+GGG | 0.616886 | 7.1:-87088658 | MS.gene92224:CDS |
| AAAACCAAAAGCTACAAGAT+CGG | 0.627640 | 7.1:-87088621 | MS.gene92224:CDS |
| CAAAAGGTGAATCCAAGCAG+AGG | 0.662634 | 7.1:+87087203 | None:intergenic |
| GGCAGGATATAAAACTCTGT+AGG | 0.684612 | 7.1:-87088772 | MS.gene92224:intron |
| GAGTAAATACTTACTACCTG+AGG | 0.719897 | 7.1:-87087363 | MS.gene92224:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTGATTTATAATCATTT+GGG | - | chr7.1:87087955-87087974 | MS.gene92224:intron | 10.0% |
| !!! | TATATTTATCTTATCTTTTT+TGG | - | chr7.1:87088365-87088384 | MS.gene92224:intron | 10.0% |
| !! | AACAAACAATAAAATAAAGT+TGG | + | chr7.1:87088604-87088623 | None:intergenic | 15.0% |
| !! | ACAAAATAAATGAAATGAAA+AGG | + | chr7.1:87089212-87089231 | None:intergenic | 15.0% |
| !! | ATTTGTGTAAAATCAAAAAA+AGG | + | chr7.1:87087223-87087242 | None:intergenic | 15.0% |
| !! | TAATTTCAGAAAAATTAATC+AGG | + | chr7.1:87089249-87089268 | None:intergenic | 15.0% |
| !!! | CATATTGATTTATAATCATT+TGG | - | chr7.1:87087954-87087973 | MS.gene92224:intron | 15.0% |
| !!! | TATTGATTTATAATCATTTG+GGG | - | chr7.1:87087956-87087975 | MS.gene92224:intron | 15.0% |
| !!! | TTGTTTAAAACAAAACAAAT+AGG | - | chr7.1:87087707-87087726 | MS.gene92224:CDS | 15.0% |
| !!! | TTTTTTGATTTTACACAAAT+GGG | - | chr7.1:87087223-87087242 | MS.gene92224:CDS | 15.0% |
| !!! | TTTTTTTGATTTTACACAAA+TGG | - | chr7.1:87087222-87087241 | MS.gene92224:CDS | 15.0% |
| !! | AATTTACCATTCAATAGAAT+TGG | - | chr7.1:87088252-87088271 | MS.gene92224:intron | 20.0% |
| !! | ACATGAATAATTGTAGAAAA+GGG | + | chr7.1:87088774-87088793 | None:intergenic | 20.0% |
| !! | AGTTTATTTATTCGTATGTA+TGG | - | chr7.1:87087886-87087905 | MS.gene92224:intron | 20.0% |
| !! | CAAAAGAATAACAGAAAATT+AGG | + | chr7.1:87088824-87088843 | None:intergenic | 20.0% |
| !! | TACAAAACAAAACAATGAAA+GGG | + | chr7.1:87087167-87087186 | None:intergenic | 20.0% |
| !! | TGAAAAAGTAGCATTAAAAA+AGG | + | chr7.1:87088195-87088214 | None:intergenic | 20.0% |
| !! | TTACAAAACAAAACAATGAA+AGG | + | chr7.1:87087168-87087187 | None:intergenic | 20.0% |
| !! | TTTGTAATAGATTTGATGTT+AGG | - | chr7.1:87087393-87087412 | MS.gene92224:CDS | 20.0% |
| !!! | AAACTATCTTAAAGCATTTA+AGG | + | chr7.1:87088548-87088567 | None:intergenic | 20.0% |
| !!! | AAATCTTCAATTTTAAGTGT+CGG | + | chr7.1:87087787-87087806 | None:intergenic | 20.0% |
| !!! | ACAATTCATATTCAGTTTTT+AGG | - | chr7.1:87089158-87089177 | MS.gene92224:intron | 20.0% |
| !!! | ATTTATCTTATCTTTTTTGG+CGG | - | chr7.1:87088368-87088387 | MS.gene92224:intron | 20.0% |
| !!! | CTCTATTCTTTTTAAGTTTT+TGG | - | chr7.1:87088706-87088725 | MS.gene92224:CDS | 20.0% |
| !!! | TGCATTTTTTTTGTCTTTTT+TGG | - | chr7.1:87087195-87087214 | MS.gene92224:CDS | 20.0% |
| !!! | TTTTTCATGTAATCTAGAAT+TGG | - | chr7.1:87088208-87088227 | MS.gene92224:intron | 20.0% |
| !!! | TTTTTGATTTTACACAAATG+GGG | - | chr7.1:87087224-87087243 | MS.gene92224:CDS | 20.0% |
| ! | AATATAGACCAAAAAGTCTA+TGG | - | chr7.1:87089272-87089291 | MS.gene92224:intron | 25.0% |
| ! | AATGCATTACTAATGTGAAA+TGG | - | chr7.1:87087331-87087350 | MS.gene92224:intron | 25.0% |
| ! | AATTGCTTGTTCTGTATAAA+TGG | - | chr7.1:87088951-87088970 | MS.gene92224:intron | 25.0% |
| ! | ATGCATTACTAATGTGAAAT+GGG | - | chr7.1:87087332-87087351 | MS.gene92224:intron | 25.0% |
| ! | ATTTCACATTAGTAATGCAT+TGG | + | chr7.1:87087332-87087351 | None:intergenic | 25.0% |
| ! | CACATGAATAATTGTAGAAA+AGG | + | chr7.1:87088775-87088794 | None:intergenic | 25.0% |
| ! | CATAAAGTAGGTTACTATTA+GGG | - | chr7.1:87088397-87088416 | MS.gene92224:intron | 25.0% |
| ! | GAGTTTGTATTTCAAAAAGT+TGG | - | chr7.1:87087729-87087748 | MS.gene92224:CDS | 25.0% |
| ! | TAACAATCTATTCGATTCAA+TGG | + | chr7.1:87088893-87088912 | None:intergenic | 25.0% |
| ! | TCATAAAGTAGGTTACTATT+AGG | - | chr7.1:87088396-87088415 | MS.gene92224:intron | 25.0% |
| ! | TGATATGTTAAAATGCATGT+TGG | - | chr7.1:87087558-87087577 | MS.gene92224:intron | 25.0% |
| ! | TGTACCTTATTAAATGGTAA+TGG | + | chr7.1:87087143-87087162 | None:intergenic | 25.0% |
| ! | TTCACCATTACCATTTAATA+AGG | - | chr7.1:87087136-87087155 | MS.gene92224:CDS | 25.0% |
| !! | AAGGAGTATGCAAATATAAA+CGG | + | chr7.1:87089479-87089498 | None:intergenic | 25.0% |
| !! | CTTTTCTACAATTATTCATG+TGG | - | chr7.1:87088773-87088792 | MS.gene92224:intron | 25.0% |
| !!! | TGAGCATAATGGATATATTT+AGG | - | chr7.1:87088288-87088307 | MS.gene92224:intron | 25.0% |
| !!! | TTTTGGTTTTACAACAATTC+TGG | + | chr7.1:87088118-87088137 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTAAACAACCTAG+CGG | + | chr7.1:87087702-87087721 | None:intergenic | 25.0% |
| AAAACCAAAAGCTACAAGAT+CGG | - | chr7.1:87088128-87088147 | MS.gene92224:intron | 30.0% | |
| AAAATCAATCGAACTGTTTC+AGG | + | chr7.1:87089363-87089382 | None:intergenic | 30.0% | |
| AAGGGTTGTACCTTATTAAA+TGG | + | chr7.1:87087149-87087168 | None:intergenic | 30.0% | |
| AGAAGTAGATTCAGTTTAAG+TGG | - | chr7.1:87088069-87088088 | MS.gene92224:intron | 30.0% | |
| CAAAAAGATCAACAACCAAA+AGG | + | chr7.1:87089565-87089584 | None:intergenic | 30.0% | |
| CAAAAATTGTTGGATCTGTA+AGG | - | chr7.1:87088319-87088338 | MS.gene92224:intron | 30.0% | |
| GAAATCACAAAAGATACAAC+AGG | + | chr7.1:87089597-87089616 | None:intergenic | 30.0% | |
| TGCTAAGAAGTTGAAAATGA+GGG | + | chr7.1:87087659-87087678 | None:intergenic | 30.0% | |
| ! | ACTACTTTCCATAGACTTTT+TGG | + | chr7.1:87089283-87089302 | None:intergenic | 30.0% |
| ! | ATTTTCAACTTCTTAGCACT+TGG | - | chr7.1:87087661-87087680 | MS.gene92224:intron | 30.0% |
| ! | GGTTCTTTTGCAAAAATTGT+TGG | - | chr7.1:87088309-87088328 | MS.gene92224:intron | 30.0% |
| ! | TGAATTTTCCTTTCTCTATC+AGG | - | chr7.1:87088019-87088038 | MS.gene92224:intron | 30.0% |
| !! | AAGTTTTTGGAGACAAGTTA+TGG | - | chr7.1:87088719-87088738 | MS.gene92224:CDS | 30.0% |
| !! | GCATGTATTTGACTTCTTTT+TGG | + | chr7.1:87088162-87088181 | None:intergenic | 30.0% |
| !! | GTATTTGACTTCTTTTTGGA+TGG | + | chr7.1:87088158-87088177 | None:intergenic | 30.0% |
| AAGTCTCAAACAGTCTTACT+AGG | + | chr7.1:87088466-87088485 | None:intergenic | 35.0% | |
| AGCCTTGAACAAACACATTT+AGG | - | chr7.1:87088861-87088880 | MS.gene92224:intron | 35.0% | |
| AGTGCTTCATAGGCAATAAA+AGG | - | chr7.1:87087480-87087499 | MS.gene92224:intron | 35.0% | |
| AGTTTACCATATGTAGTGCT+CGG | - | chr7.1:87089300-87089319 | MS.gene92224:intron | 35.0% | |
| ATAAAACTCTGTAGGACAGT+TGG | - | chr7.1:87087985-87088004 | MS.gene92224:intron | 35.0% | |
| ATGAAAAACCAGCAATAACG+AGG | + | chr7.1:87089636-87089655 | None:intergenic | 35.0% | |
| ATTTGATGTTAGGTGCATGT+TGG | - | chr7.1:87087403-87087422 | MS.gene92224:CDS | 35.0% | |
| CAGCAATAACGAGGAAAATT+GGG | + | chr7.1:87089627-87089646 | None:intergenic | 35.0% | |
| CTAAGCTGTTTATCCAAACA+GGG | - | chr7.1:87088667-87088686 | MS.gene92224:CDS | 35.0% | |
| CTGCAACATTCTATCATATG+AGG | + | chr7.1:87087604-87087623 | None:intergenic | 35.0% | |
| GAAAAGGGAATACATGCAAA+AGG | + | chr7.1:87088759-87088778 | None:intergenic | 35.0% | |
| GACCTAAATGTGTTTGTTCA+AGG | + | chr7.1:87088866-87088885 | None:intergenic | 35.0% | |
| GAGTAAATACTTACTACCTG+AGG | - | chr7.1:87089386-87089405 | MS.gene92224:intron | 35.0% | |
| GATTCAGTTTAAGTGGAGAT+TGG | - | chr7.1:87088076-87088095 | MS.gene92224:intron | 35.0% | |
| GCTAAGAAGTTGAAAATGAG+GGG | + | chr7.1:87087658-87087677 | None:intergenic | 35.0% | |
| GTGAAGGAATTTGAGCATAA+TGG | - | chr7.1:87088277-87088296 | MS.gene92224:intron | 35.0% | |
| GTGCTAAGAAGTTGAAAATG+AGG | + | chr7.1:87087660-87087679 | None:intergenic | 35.0% | |
| GTGCTTCATAGGCAATAAAA+GGG | - | chr7.1:87087481-87087500 | MS.gene92224:intron | 35.0% | |
| TAAAACTCTGTAGGACAGTT+GGG | - | chr7.1:87087986-87088005 | MS.gene92224:intron | 35.0% | |
| TCACAGCCAATTCTATTGAA+TGG | + | chr7.1:87088261-87088280 | None:intergenic | 35.0% | |
| TCCTAGCACTGTATTTACAT+GGG | - | chr7.1:87089025-87089044 | MS.gene92224:intron | 35.0% | |
| TCTACTTCTCGAAATGTGTT+TGG | + | chr7.1:87088058-87088077 | None:intergenic | 35.0% | |
| TGCTTGTTCTGTATAAATGG+TGG | - | chr7.1:87088954-87088973 | MS.gene92224:intron | 35.0% | |
| TGTTTGTGTAAGTGCTTCAT+AGG | - | chr7.1:87087470-87087489 | MS.gene92224:CDS | 35.0% | |
| TTCAATAGAATTGGCTGTGA+AGG | - | chr7.1:87088261-87088280 | MS.gene92224:intron | 35.0% | |
| TTCCTAGCACTGTATTTACA+TGG | - | chr7.1:87089024-87089043 | MS.gene92224:intron | 35.0% | |
| TTGTGTCATCAAACCAACTT+TGG | - | chr7.1:87087757-87087776 | MS.gene92224:intron | 35.0% | |
| ! | AGAACCATAAGGGTGTAAAA+CGG | + | chr7.1:87089068-87089087 | None:intergenic | 35.0% |
| ! | GATTTATAATCATTTGGGGC+AGG | - | chr7.1:87087960-87087979 | MS.gene92224:intron | 35.0% |
| ! | TGTTTTACCTCAATGTTGCA+GGG | - | chr7.1:87088985-87089004 | MS.gene92224:intron | 35.0% |
| ! | TTGTTGATCTTTTTGCTGCA+AGG | - | chr7.1:87089570-87089589 | MS.gene92224:intron | 35.0% |
| !! | CAGAGAATTTTGATACGTTG+TGG | - | chr7.1:87087621-87087640 | MS.gene92224:intron | 35.0% |
| !! | TTGTTTTACCTCAATGTTGC+AGG | - | chr7.1:87088984-87089003 | MS.gene92224:intron | 35.0% |
| AAACTCGAATAGCTGAGATC+AGG | + | chr7.1:87088801-87088820 | None:intergenic | 40.0% | |
| AACTCGAATAGCTGAGATCA+GGG | + | chr7.1:87088800-87088819 | None:intergenic | 40.0% | |
| AGAAAAGACAAGACCCTGTT+TGG | + | chr7.1:87088683-87088702 | None:intergenic | 40.0% | |
| AGTGGAGATTGGAGTTTCAT+AGG | - | chr7.1:87088087-87088106 | MS.gene92224:intron | 40.0% | |
| CAGAAAGAAACGTACCAGAT+CGG | + | chr7.1:87089102-87089121 | None:intergenic | 40.0% | |
| CCAGCAATAACGAGGAAAAT+TGG | + | chr7.1:87089628-87089647 | None:intergenic | 40.0% | |
| CCATCTGAGTTATACTTACG+CGG | + | chr7.1:87087518-87087537 | None:intergenic | 40.0% | |
| CCTAGCACTGTATTTACATG+GGG | - | chr7.1:87089026-87089045 | MS.gene92224:intron | 40.0% | |
| GAGATTGGAGTTTCATAGGA+GGG | - | chr7.1:87088091-87088110 | MS.gene92224:intron | 40.0% | |
| GATGAATGAATACACACCTC+AGG | + | chr7.1:87089405-87089424 | None:intergenic | 40.0% | |
| GCTAAGCTGTTTATCCAAAC+AGG | - | chr7.1:87088666-87088685 | MS.gene92224:CDS | 40.0% | |
| GGCAGGATATAAAACTCTGT+AGG | - | chr7.1:87087977-87087996 | MS.gene92224:intron | 40.0% | |
| TCAACTTCTTAGCACTTGGT+TGG | - | chr7.1:87087665-87087684 | MS.gene92224:CDS | 40.0% | |
| TGGCGGCATTATCATAAAGT+AGG | - | chr7.1:87088385-87088404 | MS.gene92224:intron | 40.0% | |
| TTCAATGTAACCGCATATGC+CGG | + | chr7.1:87087842-87087861 | None:intergenic | 40.0% | |
| ! | AAACGTACCAGATCGGATTT+TGG | + | chr7.1:87089095-87089114 | None:intergenic | 40.0% |
| ! | AACGTACCAGATCGGATTTT+GGG | + | chr7.1:87089094-87089113 | None:intergenic | 40.0% |
| ! | CCAATTTTCCTCGTTATTGC+TGG | - | chr7.1:87089625-87089644 | MS.gene92224:CDS | 40.0% |
| ! | GAACCATAAGGGTGTAAAAC+GGG | + | chr7.1:87089067-87089086 | None:intergenic | 40.0% |
| !! | ATTTTGATACGTTGTGGCGT+CGG | - | chr7.1:87087627-87087646 | MS.gene92224:intron | 40.0% |
| !! | CTTATTTGCTGTGCCTTTCT+TGG | - | chr7.1:87089334-87089353 | MS.gene92224:intron | 40.0% |
| !!! | ATTTTGGGGCTAGAACCATA+AGG | + | chr7.1:87089079-87089098 | None:intergenic | 40.0% |
| !!! | TTTTGGGGCTAGAACCATAA+GGG | + | chr7.1:87089078-87089097 | None:intergenic | 40.0% |
| ACTCGAATAGCTGAGATCAG+GGG | + | chr7.1:87088799-87088818 | None:intergenic | 45.0% | |
| AGAATGCCGAGCACTACATA+TGG | + | chr7.1:87089309-87089328 | None:intergenic | 45.0% | |
| CAAAAGGTGAATCCAAGCAG+AGG | + | chr7.1:87089549-87089568 | None:intergenic | 45.0% | |
| CATCGACACATGCTAAACAC+TGG | + | chr7.1:87087812-87087831 | None:intergenic | 45.0% | |
| CCATCACTCCTGATAGAGAA+AGG | + | chr7.1:87088030-87088049 | None:intergenic | 45.0% | |
| CCCCATGTAAATACAGTGCT+AGG | + | chr7.1:87089029-87089048 | None:intergenic | 45.0% | |
| CCGCGTAAGTATAACTCAGA+TGG | - | chr7.1:87087515-87087534 | MS.gene92224:intron | 45.0% | |
| CCTTTCTCTATCAGGAGTGA+TGG | - | chr7.1:87088027-87088046 | MS.gene92224:intron | 45.0% | |
| CTATGAACCCTGCAACATTG+AGG | + | chr7.1:87088995-87089014 | None:intergenic | 45.0% | |
| CTCAATGTTGCAGGGTTCAT+AGG | - | chr7.1:87088993-87089012 | MS.gene92224:intron | 45.0% | |
| GGAGATTGGAGTTTCATAGG+AGG | - | chr7.1:87088090-87088109 | MS.gene92224:intron | 45.0% | |
| TCCTATGCTAGAAAGCTGCA+AGG | + | chr7.1:87089498-87089517 | None:intergenic | 45.0% | |
| ! | ACGTACCAGATCGGATTTTG+GGG | + | chr7.1:87089093-87089112 | None:intergenic | 45.0% |
| ! | AGTTGACTTTAGCCTCTGCT+TGG | - | chr7.1:87089534-87089553 | MS.gene92224:intron | 45.0% |
| ! | CGAACCGATCTTGTAGCTTT+TGG | + | chr7.1:87088135-87088154 | None:intergenic | 45.0% |
| ! | CTCTGCTTGGATTCACCTTT+TGG | - | chr7.1:87089547-87089566 | MS.gene92224:intron | 45.0% |
| ! | CTGTTTCAGGTGTCCAAGAA+AGG | + | chr7.1:87089350-87089369 | None:intergenic | 45.0% |
| ! | GACTGTTTGAGACTTGAGAG+AGG | - | chr7.1:87088471-87088490 | MS.gene92224:intron | 45.0% |
| ! | TCCTTGCAGCTTTCTAGCAT+AGG | - | chr7.1:87089494-87089513 | MS.gene92224:intron | 45.0% |
| ATGTCCAACACCGGCATATG+CGG | - | chr7.1:87087829-87087848 | MS.gene92224:intron | 50.0% | |
| TCTAGCCCCAAAATCCGATC+TGG | - | chr7.1:87089085-87089104 | MS.gene92224:intron | 50.0% | |
| ! | CATGTGTCGATGTCCAACAC+CGG | - | chr7.1:87087820-87087839 | MS.gene92224:intron | 50.0% |
| ! | GCTCCCGTTTTACACCCTTA+TGG | - | chr7.1:87089061-87089080 | MS.gene92224:intron | 50.0% |
| ! | TTGGTGTGAGTTTTGCCGCT+AGG | - | chr7.1:87087684-87087703 | MS.gene92224:CDS | 50.0% |
| !! | AAGTGTCGGTGCTCCAAAGT+TGG | + | chr7.1:87087773-87087792 | None:intergenic | 50.0% |
| GTAACCGCATATGCCGGTGT+TGG | + | chr7.1:87087836-87087855 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 87087110 | 87089661 | 87087110 | ID=MS.gene92224 |
| chr7.1 | mRNA | 87087110 | 87089661 | 87087110 | ID=MS.gene92224.t1;Parent=MS.gene92224 |
| chr7.1 | exon | 87089614 | 87089661 | 87089614 | ID=MS.gene92224.t1.exon1;Parent=MS.gene92224.t1 |
| chr7.1 | CDS | 87089614 | 87089661 | 87089614 | ID=cds.MS.gene92224.t1;Parent=MS.gene92224.t1 |
| chr7.1 | exon | 87088585 | 87088789 | 87088585 | ID=MS.gene92224.t1.exon2;Parent=MS.gene92224.t1 |
| chr7.1 | CDS | 87088585 | 87088789 | 87088585 | ID=cds.MS.gene92224.t1;Parent=MS.gene92224.t1 |
| chr7.1 | exon | 87087665 | 87087765 | 87087665 | ID=MS.gene92224.t1.exon3;Parent=MS.gene92224.t1 |
| chr7.1 | CDS | 87087665 | 87087765 | 87087665 | ID=cds.MS.gene92224.t1;Parent=MS.gene92224.t1 |
| chr7.1 | exon | 87087364 | 87087492 | 87087364 | ID=MS.gene92224.t1.exon4;Parent=MS.gene92224.t1 |
| chr7.1 | CDS | 87087364 | 87087492 | 87087364 | ID=cds.MS.gene92224.t1;Parent=MS.gene92224.t1 |
| chr7.1 | exon | 87087110 | 87087268 | 87087110 | ID=MS.gene92224.t1.exon5;Parent=MS.gene92224.t1 |
| chr7.1 | CDS | 87087110 | 87087268 | 87087110 | ID=cds.MS.gene92224.t1;Parent=MS.gene92224.t1 |
| Gene Sequence |
| Protein sequence |
