Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92384.t1 | RHN53207.1 | 98.4 | 498 | 7 | 1 | 1 | 497 | 3 | 500 | 7.50E-279 | 969.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92384.t1 | O22446 | 81.3 | 486 | 87 | 2 | 5 | 488 | 3 | 486 | 5.7e-227 | 788.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92384.t1 | A0A396HQV4 | 98.4 | 498 | 7 | 1 | 1 | 497 | 3 | 500 | 5.4e-279 | 969.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057869 | MS.gene92384 | 0.802924 | 4.45E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92384.t1 | MTR_5g004640 | 99.151 | 471 | 3 | 1 | 1 | 470 | 3 | 473 | 0.0 | 967 |
| MS.gene92384.t1 | MTR_3g118535 | 79.022 | 491 | 96 | 4 | 6 | 493 | 4 | 490 | 0.0 | 776 |
| MS.gene92384.t1 | MTR_3g077160 | 66.282 | 433 | 137 | 5 | 5 | 428 | 11 | 443 | 0.0 | 615 |
| MS.gene92384.t1 | MTR_4g055080 | 60.250 | 400 | 158 | 1 | 18 | 416 | 4 | 403 | 0.0 | 518 |
| MS.gene92384.t1 | MTR_4g055080 | 60.317 | 378 | 149 | 1 | 40 | 416 | 1 | 378 | 1.44e-171 | 489 |
| MS.gene92384.t1 | MTR_3g077120 | 65.363 | 179 | 57 | 2 | 5 | 178 | 11 | 189 | 7.52e-81 | 249 |
| MS.gene92384.t1 | MTR_2g087270 | 34.615 | 182 | 109 | 3 | 150 | 321 | 154 | 335 | 8.09e-25 | 106 |
| MS.gene92384.t1 | MTR_4g109500 | 25.366 | 410 | 269 | 15 | 18 | 410 | 16 | 405 | 1.12e-24 | 108 |
| MS.gene92384.t1 | MTR_4g109500 | 25.293 | 427 | 280 | 16 | 1 | 410 | 1 | 405 | 1.38e-24 | 107 |
| MS.gene92384.t1 | MTR_4g111985 | 24.923 | 325 | 200 | 10 | 38 | 339 | 257 | 560 | 7.57e-21 | 96.3 |
| MS.gene92384.t1 | MTR_4g111985 | 24.923 | 325 | 200 | 10 | 38 | 339 | 218 | 521 | 8.24e-21 | 96.3 |
| MS.gene92384.t1 | MTR_8g093800 | 27.206 | 272 | 165 | 8 | 69 | 319 | 114 | 373 | 7.76e-19 | 89.0 |
| MS.gene92384.t1 | MTR_1g016440 | 27.551 | 294 | 183 | 12 | 38 | 320 | 52 | 326 | 8.35e-19 | 88.2 |
| MS.gene92384.t1 | MTR_4g111985 | 25.170 | 294 | 179 | 9 | 38 | 311 | 218 | 490 | 5.26e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92384.t1 | AT4G38130 | 79.835 | 486 | 94 | 2 | 5 | 488 | 3 | 486 | 0.0 | 779 |
| MS.gene92384.t1 | AT4G38130 | 81.760 | 466 | 83 | 1 | 5 | 468 | 3 | 468 | 0.0 | 769 |
| MS.gene92384.t1 | AT5G63110 | 67.229 | 415 | 132 | 2 | 1 | 413 | 1 | 413 | 0.0 | 597 |
| MS.gene92384.t1 | AT3G44680 | 59.250 | 400 | 162 | 1 | 18 | 416 | 4 | 403 | 0.0 | 519 |
| MS.gene92384.t1 | AT5G35600 | 55.721 | 402 | 168 | 3 | 10 | 405 | 1 | 398 | 5.27e-162 | 465 |
| MS.gene92384.t1 | AT3G44490 | 46.269 | 134 | 72 | 0 | 283 | 416 | 2 | 135 | 4.74e-40 | 142 |
| MS.gene92384.t1 | AT3G44660 | 40.299 | 134 | 64 | 1 | 283 | 416 | 2 | 119 | 6.03e-29 | 111 |
| MS.gene92384.t1 | AT5G61060 | 28.655 | 342 | 214 | 12 | 18 | 340 | 24 | 354 | 1.47e-27 | 117 |
| MS.gene92384.t1 | AT1G08460 | 27.914 | 326 | 199 | 8 | 15 | 321 | 18 | 326 | 9.40e-27 | 112 |
| MS.gene92384.t1 | AT5G61060 | 28.324 | 346 | 214 | 12 | 18 | 340 | 24 | 358 | 2.91e-26 | 113 |
| MS.gene92384.t1 | AT5G61070 | 24.635 | 479 | 315 | 14 | 1 | 456 | 36 | 491 | 4.76e-26 | 112 |
| MS.gene92384.t1 | AT3G18520 | 29.339 | 242 | 161 | 5 | 150 | 381 | 276 | 517 | 5.48e-23 | 102 |
| MS.gene92384.t1 | AT1G08460 | 28.364 | 275 | 166 | 7 | 15 | 275 | 18 | 275 | 5.48e-23 | 100 |
| MS.gene92384.t1 | AT3G18520 | 29.339 | 242 | 161 | 5 | 150 | 381 | 276 | 517 | 6.85e-23 | 102 |
| MS.gene92384.t1 | AT3G18520 | 29.167 | 240 | 160 | 5 | 150 | 379 | 276 | 515 | 8.76e-23 | 102 |
| MS.gene92384.t1 | AT3G18520 | 31.579 | 171 | 112 | 4 | 150 | 315 | 276 | 446 | 2.63e-18 | 87.8 |
| MS.gene92384.t1 | AT5G26040 | 24.601 | 313 | 208 | 9 | 20 | 321 | 73 | 368 | 6.58e-18 | 85.9 |
| MS.gene92384.t1 | AT4G33470 | 25.112 | 223 | 152 | 3 | 79 | 299 | 142 | 351 | 1.24e-17 | 85.5 |
Find 124 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGATCTTGCTGTGTTTC+AGG | 0.085056 | 5.1:+37024 | None:intergenic |
| CAAGAACTCTCGCCCTTTAT+TGG | 0.114993 | 5.1:-34575 | MS.gene92384:CDS |
| TGATATTGTGCTGGCTATTT+TGG | 0.123222 | 5.1:-36803 | MS.gene92384:CDS |
| TCCATCACCTTTCCCATTAA+TGG | 0.126989 | 5.1:+35607 | None:intergenic |
| ACCTCTTGAAGCTCAGTATT+TGG | 0.175020 | 5.1:+34475 | None:intergenic |
| TTCATTGTTTAAGCCATTAA+TGG | 0.195261 | 5.1:-35620 | MS.gene92384:CDS |
| ACTGTTTCATTTCATAAGTT+TGG | 0.196145 | 5.1:-35751 | MS.gene92384:CDS |
| GCTCTTATATCATCCAATAA+AGG | 0.253207 | 5.1:+34562 | None:intergenic |
| CATGAGTACTATGAATATTT+TGG | 0.253682 | 5.1:-34640 | MS.gene92384:CDS |
| GACCCTATCAGTTGTGTAAA+AGG | 0.257449 | 5.1:+35777 | None:intergenic |
| CTGTTTCATTTCATAAGTTT+GGG | 0.260711 | 5.1:-35750 | MS.gene92384:CDS |
| ACAGGAGATGTTCGTGATAT+TGG | 0.286311 | 5.1:-35712 | MS.gene92384:CDS |
| AAGTTTGGGGATTACTTTCC+TGG | 0.286928 | 5.1:-35736 | MS.gene92384:CDS |
| TCCTGCTCTTCTTTGATGAA+TGG | 0.294404 | 5.1:+32586 | None:intergenic |
| TGTCTTCAGGTGACAGGGTC+CGG | 0.312206 | 5.1:-32634 | MS.gene92384:intron |
| GAGGTTGGAAACTATTATTA+TGG | 0.332480 | 5.1:-37213 | MS.gene92384:CDS |
| CTCTTATATCATCCAATAAA+GGG | 0.356806 | 5.1:+34563 | None:intergenic |
| TGTGGTGCTGACTCTTTATC+TGG | 0.360549 | 5.1:-35553 | MS.gene92384:CDS |
| CAGTATTTGGAGGTCTCTCT+TGG | 0.363054 | 5.1:+34488 | None:intergenic |
| TCATTGTTTAAGCCATTAAT+GGG | 0.371064 | 5.1:-35619 | MS.gene92384:CDS |
| TATGTGATATTGCAATAAAT+TGG | 0.375446 | 5.1:-36882 | MS.gene92384:CDS |
| CTGACTCTTTATCTGGAGAT+AGG | 0.378641 | 5.1:-35546 | MS.gene92384:CDS |
| TCACGAACATCTCCTGTTCC+AGG | 0.383235 | 5.1:+35718 | None:intergenic |
| AGATATTGCTACACCTTTCA+AGG | 0.385430 | 5.1:-32890 | MS.gene92384:CDS |
| TCTGATCTTGCTGTGTTTCA+GGG | 0.386144 | 5.1:+37025 | None:intergenic |
| GGGGATTACTTTCCTGGAAC+AGG | 0.387475 | 5.1:-35730 | MS.gene92384:CDS |
| GTCTTCAGGTGACAGGGTCC+GGG | 0.395128 | 5.1:-32633 | MS.gene92384:intron |
| CGAATTCTATGTGGTTTCAT+CGG | 0.406004 | 5.1:+37180 | None:intergenic |
| TCTTTATCTGGAGATAGGTT+AGG | 0.408594 | 5.1:-35541 | MS.gene92384:CDS |
| AATGTTCCTCTTCTGTTGCT+CGG | 0.418112 | 5.1:-35460 | MS.gene92384:CDS |
| TAATAATAGTTTCCAACCTC+TGG | 0.420126 | 5.1:+37216 | None:intergenic |
| AGGTTGGAAACTATTATTAT+GGG | 0.421047 | 5.1:-37212 | MS.gene92384:CDS |
| GGAGGGAACTCGCTTCCATC+AGG | 0.422027 | 5.1:-37279 | MS.gene92384:CDS |
| GAAGACTGTCCCGTGTTTGA+TGG | 0.423471 | 5.1:-36973 | MS.gene92384:CDS |
| ATCAGACAGGTGTTGCTCTC+GGG | 0.428071 | 5.1:-34690 | MS.gene92384:intron |
| CTGAATGTTCCCTTGGATGA+TGG | 0.433256 | 5.1:-35664 | MS.gene92384:CDS |
| GATGTTCGTGATATTGGATA+TGG | 0.437390 | 5.1:-35706 | MS.gene92384:CDS |
| CTCTCTTGGAATGGAACACT+TGG | 0.438183 | 5.1:+34502 | None:intergenic |
| GAATTCTATGTGGTTTCATC+GGG | 0.439422 | 5.1:+37181 | None:intergenic |
| TGGAAACTATTATTATGGGC+AGG | 0.455836 | 5.1:-37208 | MS.gene92384:CDS |
| TTATTCACTGAATGTTCCCT+TGG | 0.457739 | 5.1:-35671 | MS.gene92384:CDS |
| AAGATGATAGAGATGAAAGA+TGG | 0.458514 | 5.1:-33663 | MS.gene92384:CDS |
| AACTTCTTGAGAATTTATCT+AGG | 0.465350 | 5.1:-34537 | MS.gene92384:CDS |
| GATCAGACAGGTGTTGCTCT+CGG | 0.468600 | 5.1:-34691 | MS.gene92384:intron |
| CGTGATATTGGATATGGTAA+AGG | 0.473946 | 5.1:-35700 | MS.gene92384:CDS |
| AGGGTCCGGGGTGGATTCAA+TGG | 0.478359 | 5.1:-32620 | MS.gene92384:CDS |
| GCAACGTGAAGAGCATAGTC+TGG | 0.485333 | 5.1:+34616 | None:intergenic |
| TGTTTCAATCTTTCGATCAA+AGG | 0.489442 | 5.1:-35517 | MS.gene92384:CDS |
| AACCTACTGCCGCTAAAGAC+AGG | 0.489469 | 5.1:-37101 | MS.gene92384:CDS |
| CAGCAATTCTCTTGCACGAA+GGG | 0.494692 | 5.1:-33542 | MS.gene92384:CDS |
| CTTCTGTTGCTCGGTGGAGG+TGG | 0.497564 | 5.1:-35451 | MS.gene92384:CDS |
| ATTGCATGTCTTCAGGTGAC+AGG | 0.499344 | 5.1:-32640 | MS.gene92384:intron |
| CCTCTTCTGTTGCTCGGTGG+AGG | 0.504569 | 5.1:-35454 | MS.gene92384:CDS |
| TATTTCTACGATCCAGAGGT+TGG | 0.504725 | 5.1:-37228 | MS.gene92384:CDS |
| TTCTATGTGGTTTCATCGGG+TGG | 0.507556 | 5.1:+37184 | None:intergenic |
| GTGGATTCAATGGCTGTGGA+TGG | 0.507834 | 5.1:-32610 | MS.gene92384:CDS |
| TTAATGGCTTAAACAATGAA+TGG | 0.508026 | 5.1:+35623 | None:intergenic |
| TTGCAATATCACATATTCCA+TGG | 0.509410 | 5.1:+36890 | None:intergenic |
| CGGGGTGGATTCAATGGCTG+TGG | 0.513588 | 5.1:-32614 | MS.gene92384:CDS |
| ACCATTCATCAAAGAAGAGC+AGG | 0.519230 | 5.1:-32587 | MS.gene92384:CDS |
| GTTTAAGCCATTAATGGGAA+AGG | 0.520381 | 5.1:-35614 | MS.gene92384:CDS |
| ATCAGATTAGACAGTTGAAG+AGG | 0.521631 | 5.1:-37008 | MS.gene92384:CDS |
| CTATGTAAATGATATTGTGC+TGG | 0.523209 | 5.1:-36812 | MS.gene92384:CDS |
| TCTTGAAGCTCAGTATTTGG+AGG | 0.524092 | 5.1:+34478 | None:intergenic |
| TTTGGAGGTCTCTCTTGGAA+TGG | 0.524293 | 5.1:+34493 | None:intergenic |
| GCCATTAATGGGAAAGGTGA+TGG | 0.528632 | 5.1:-35608 | MS.gene92384:CDS |
| CAACAGAAGAGGAACATTGA+AGG | 0.536582 | 5.1:+35465 | None:intergenic |
| GCAGAGGTCCCTGTCTTTAG+CGG | 0.541800 | 5.1:+37092 | None:intergenic |
| ATCATCAATTCCATCATCCA+AGG | 0.546064 | 5.1:+35654 | None:intergenic |
| TGGATGATGGAAAGTGTTAG+TGG | 0.549604 | 5.1:-37300 | None:intergenic |
| GATATTGCAATAAATTGGTC+TGG | 0.559446 | 5.1:-36877 | MS.gene92384:CDS |
| ATCGATATCCACCATGGTGA+TGG | 0.560349 | 5.1:-35811 | MS.gene92384:CDS |
| TCCAAATACTGAGCTTCAAG+AGG | 0.563357 | 5.1:-34476 | MS.gene92384:intron |
| GAGCATGCAATCTCCTTGAA+AGG | 0.568668 | 5.1:+32877 | None:intergenic |
| GGCACGGTGTTGGTGTTATG+AGG | 0.568968 | 5.1:-35410 | MS.gene92384:intron |
| TCTTCAGGTGACAGGGTCCG+GGG | 0.569453 | 5.1:-32632 | MS.gene92384:intron |
| GGAAACTATTATTATGGGCA+GGG | 0.569643 | 5.1:-37207 | MS.gene92384:CDS |
| CTGATCTTGCTGTGTTTCAG+GGG | 0.570950 | 5.1:+37026 | None:intergenic |
| CCACCATGGTGATGGTGTAG+AGG | 0.571069 | 5.1:-35803 | MS.gene92384:CDS |
| AGATGATAGAGATGAAAGAT+GGG | 0.571728 | 5.1:-33662 | MS.gene92384:CDS |
| CAAGGAGATTGCATGCTCCA+AGG | 0.575055 | 5.1:-32872 | MS.gene92384:intron |
| CAGTTGAAGAGGTTTAATGT+TGG | 0.575078 | 5.1:-36997 | MS.gene92384:CDS |
| TCGCTTCCATCAGGGTCAGA+TGG | 0.576184 | 5.1:-37270 | MS.gene92384:CDS |
| CATTGCAATACCACAGCACC+AGG | 0.578846 | 5.1:+35574 | None:intergenic |
| TTCATATTTCTACGATCCAG+AGG | 0.584629 | 5.1:-37232 | MS.gene92384:CDS |
| TTCACACCATCTGACCCTGA+TGG | 0.587776 | 5.1:+37264 | None:intergenic |
| CCTCCACCGAGCAACAGAAG+AGG | 0.588820 | 5.1:+35454 | None:intergenic |
| ACCTACTGCCGCTAAAGACA+GGG | 0.592614 | 5.1:-37100 | MS.gene92384:CDS |
| GTGTTGAAGCAACCCATAGT+GGG | 0.598870 | 5.1:+37137 | None:intergenic |
| CCATGGTGATGGTGTAGAGG+AGG | 0.600370 | 5.1:-35800 | MS.gene92384:CDS |
| TGGGTTGCTTCAACACATGC+AGG | 0.603210 | 5.1:-37130 | MS.gene92384:CDS |
| TAAGAAATGTGGCACGGTGT+TGG | 0.603976 | 5.1:-35420 | MS.gene92384:CDS |
| TTGCATGTCTTCAGGTGACA+GGG | 0.605970 | 5.1:-32639 | MS.gene92384:intron |
| TGGGCAGCGTGTTCTATATG+TGG | 0.608158 | 5.1:-35836 | MS.gene92384:intron |
| TGTGTCATTCGAATTCTATG+TGG | 0.608842 | 5.1:+37171 | None:intergenic |
| TGGCTATACAATAAGAAATG+TGG | 0.613448 | 5.1:-35431 | MS.gene92384:CDS |
| TCAGGTGACAGGGTCCGGGG+TGG | 0.613743 | 5.1:-32629 | MS.gene92384:intron |
| TCACGTTGCTCCTAGTAACA+TGG | 0.615242 | 5.1:-34602 | MS.gene92384:CDS |
| GTTCCTCTTCTGTTGCTCGG+TGG | 0.616750 | 5.1:-35457 | MS.gene92384:CDS |
| GAGGGAACTCGCTTCCATCA+GGG | 0.622070 | 5.1:-37278 | MS.gene92384:CDS |
| TCCCTGTCTTTAGCGGCAGT+AGG | 0.628266 | 5.1:+37099 | None:intergenic |
| TGATGGAAAGTGTTAGTGGA+GGG | 0.630916 | 5.1:-37296 | MS.gene92384:CDS |
| ATTGCAATAAATTGGTCTGG+TGG | 0.637116 | 5.1:-36874 | MS.gene92384:CDS |
| TCATCAATTCCATCATCCAA+GGG | 0.643226 | 5.1:+35655 | None:intergenic |
| AGAGTAAAGACCATCAAACA+CGG | 0.645425 | 5.1:+36963 | None:intergenic |
| TGTTTCATTTCATAAGTTTG+GGG | 0.649344 | 5.1:-35749 | MS.gene92384:CDS |
| TGTGTTGAAGCAACCCATAG+TGG | 0.649660 | 5.1:+37136 | None:intergenic |
| ACAGCAATTCTCTTGCACGA+AGG | 0.651780 | 5.1:-33543 | MS.gene92384:intron |
| TATTCATAGTACTCATGCTG+AGG | 0.653964 | 5.1:+34646 | None:intergenic |
| AAGCCACGTAGTCATCAGCA+TGG | 0.657660 | 5.1:+37064 | None:intergenic |
| CATCAGCATGGAACTTGCAG+AGG | 0.658951 | 5.1:+37076 | None:intergenic |
| ATTAATGGGAAAGGTGATGG+AGG | 0.665076 | 5.1:-35605 | MS.gene92384:CDS |
| CACAGCCATTGAATCCACCC+CGG | 0.674248 | 5.1:+32615 | None:intergenic |
| CCTCTACACCATCACCATGG+TGG | 0.674261 | 5.1:+35803 | None:intergenic |
| GAGTAAAGACCATCAAACAC+GGG | 0.681916 | 5.1:+36964 | None:intergenic |
| TGAAGCTGAGCATAAAGACA+TGG | 0.685361 | 5.1:-33503 | MS.gene92384:intron |
| ATACAATAAGAAATGTGGCA+CGG | 0.692820 | 5.1:-35426 | MS.gene92384:CDS |
| GGTGCTGTGGTATTGCAATG+TGG | 0.701873 | 5.1:-35571 | MS.gene92384:CDS |
| CCTCCTCTACACCATCACCA+TGG | 0.705263 | 5.1:+35800 | None:intergenic |
| GGAACTTCTCAAGATACACG+AGG | 0.706793 | 5.1:-36782 | MS.gene92384:intron |
| GGTGCTCTTAAATTGAACCA+TGG | 0.713674 | 5.1:-36907 | MS.gene92384:CDS |
| GTTCCATGCTGATGACTACG+TGG | 0.713734 | 5.1:-37067 | MS.gene92384:CDS |
| ATGATGGAAAGTGTTAGTGG+AGG | 0.723350 | 5.1:-37297 | MS.gene92384:CDS |
| GTGGACATCGATATCCACCA+TGG | 0.732038 | 5.1:-35817 | MS.gene92384:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATAATATAAACTATAATT+TGG | - | chr5.1:37022-37041 | MS.gene92384:CDS | 10.0% |
| !!! | ATATTTTAATATAAAACATC+GGG | + | chr5.1:33950-33969 | None:intergenic | 10.0% |
| !!! | TAATTAATACATATTTTAAG+AGG | - | chr5.1:33419-33438 | MS.gene92384:intron | 10.0% |
| !! | AATTGATTGAATATCATTTA+TGG | - | chr5.1:35643-35662 | MS.gene92384:CDS | 15.0% |
| !! | ACTTAATCAAGATAAATAAA+TGG | - | chr5.1:36742-36761 | MS.gene92384:intron | 15.0% |
| !! | AGTAATAGTAATTGTATTAA+TGG | - | chr5.1:34858-34877 | MS.gene92384:intron | 15.0% |
| !! | TTAATACAATTACTATTACT+TGG | + | chr5.1:34858-34877 | None:intergenic | 15.0% |
| !! | TTATTTATCTTGATTAAGTT+GGG | + | chr5.1:36741-36760 | None:intergenic | 15.0% |
| !! | TTTATTTATCTTGATTAAGT+TGG | + | chr5.1:36742-36761 | None:intergenic | 15.0% |
| !!! | ATTATTGGGTTTATTTATTT+TGG | - | chr5.1:36766-36785 | MS.gene92384:intron | 15.0% |
| !!! | CGTAAAATTAAAACAATTTT+GGG | - | chr5.1:33442-33461 | MS.gene92384:intron | 15.0% |
| !!! | GAATATATATTTTTCTTCAA+TGG | - | chr5.1:35686-35705 | MS.gene92384:CDS | 15.0% |
| !!! | GTAAAATTAAAACAATTTTG+GGG | - | chr5.1:33443-33462 | MS.gene92384:intron | 15.0% |
| !!! | GTTTTTTTTTTTTTTTTGTC+AGG | + | chr5.1:37143-37162 | None:intergenic | 15.0% |
| !!! | TTATTGGGTTTATTTATTTT+GGG | - | chr5.1:36767-36786 | MS.gene92384:intron | 15.0% |
| !!! | TTTATTTTCATAGTTAGTTT+TGG | - | chr5.1:36067-36086 | MS.gene92384:intron | 15.0% |
| !! | AAATTTACCAACAATAAACT+AGG | + | chr5.1:34487-34506 | None:intergenic | 20.0% |
| !! | AATATAAACTATAATTTGGC+AGG | - | chr5.1:37026-37045 | MS.gene92384:CDS | 20.0% |
| !! | AATTATTGAACTGAATGAAT+AGG | - | chr5.1:36104-36123 | MS.gene92384:intron | 20.0% |
| !! | ACATAGCAATAAATTACAAA+TGG | - | chr5.1:34948-34967 | MS.gene92384:intron | 20.0% |
| !! | AGATAAATAAATGGCATTAT+TGG | - | chr5.1:36751-36770 | MS.gene92384:intron | 20.0% |
| !! | ATATAAACTATAATTTGGCA+GGG | - | chr5.1:37027-37046 | MS.gene92384:CDS | 20.0% |
| !! | ATGAAAATAAAAACAGAGTA+TGG | + | chr5.1:36058-36077 | None:intergenic | 20.0% |
| !! | CATTTAGTAAAATACAGATA+AGG | + | chr5.1:36820-36839 | None:intergenic | 20.0% |
| !! | GATAAATAAATGGCATTATT+GGG | - | chr5.1:36752-36771 | MS.gene92384:intron | 20.0% |
| !! | TAAAATGTTGACATAAAAGT+AGG | + | chr5.1:33732-33751 | None:intergenic | 20.0% |
| !! | TATGTGATATTGCAATAAAT+TGG | - | chr5.1:32967-32986 | MS.gene92384:intron | 20.0% |
| !! | TGGTAAAATGAAAATCTTAT+AGG | - | chr5.1:35706-35725 | MS.gene92384:CDS | 20.0% |
| !!! | AATTTGTAATCCATTTTTAG+AGG | - | chr5.1:33224-33243 | MS.gene92384:intron | 20.0% |
| !!! | ATCTGTATTTTACTAAATGA+TGG | - | chr5.1:36821-36840 | MS.gene92384:CDS | 20.0% |
| !!! | ATGCAGTATTCTATTTTTTA+AGG | - | chr5.1:35101-35120 | MS.gene92384:intron | 20.0% |
| !!! | GCGTAAAATTAAAACAATTT+TGG | - | chr5.1:33441-33460 | MS.gene92384:intron | 20.0% |
| !!! | TATTTATCTTGATTAAGTTG+GGG | + | chr5.1:36740-36759 | None:intergenic | 20.0% |
| ! | AAACATTTAGATCGTTTCTA+TGG | - | chr5.1:35828-35847 | MS.gene92384:CDS | 25.0% |
| ! | AAAGCAAAGAAAATCAGTAA+AGG | + | chr5.1:33254-33273 | None:intergenic | 25.0% |
| ! | AACTTCTTGAGAATTTATCT+AGG | - | chr5.1:35312-35331 | MS.gene92384:intron | 25.0% |
| ! | AAGTAATGAGTACAATATAG+TGG | - | chr5.1:36469-36488 | MS.gene92384:intron | 25.0% |
| ! | AAGTTTCCTTCAAAGATATA+AGG | + | chr5.1:33802-33821 | None:intergenic | 25.0% |
| ! | ACTGTTTCATTTCATAAGTT+TGG | - | chr5.1:34098-34117 | MS.gene92384:intron | 25.0% |
| ! | AGGTTGGAAACTATTATTAT+GGG | - | chr5.1:32637-32656 | MS.gene92384:intron | 25.0% |
| ! | AGTAATGAGTACAATATAGT+GGG | - | chr5.1:36470-36489 | MS.gene92384:intron | 25.0% |
| ! | AGTTTCCTTCAAAGATATAA+GGG | + | chr5.1:33801-33820 | None:intergenic | 25.0% |
| ! | ATAAATCAACAAGATAATGC+AGG | + | chr5.1:33110-33129 | None:intergenic | 25.0% |
| ! | ATAATGTTGAGATGATTGTT+TGG | + | chr5.1:36418-36437 | None:intergenic | 25.0% |
| ! | CATGACTGTATGTAAATTAT+AGG | + | chr5.1:34815-34834 | None:intergenic | 25.0% |
| ! | CCAATAGTGTTAATATAGAA+CGG | + | chr5.1:35133-35152 | None:intergenic | 25.0% |
| ! | CTATAATTTACATACAGTCA+TGG | - | chr5.1:34813-34832 | MS.gene92384:intron | 25.0% |
| ! | CTCTTATATCATCCAATAAA+GGG | + | chr5.1:35289-35308 | None:intergenic | 25.0% |
| ! | CTGTTTCATTTCATAAGTTT+GGG | - | chr5.1:34099-34118 | MS.gene92384:intron | 25.0% |
| ! | GCAAAATCACAACAATAATT+AGG | - | chr5.1:34880-34899 | MS.gene92384:intron | 25.0% |
| ! | GTAATGCAAATTTCAATCAA+AGG | + | chr5.1:33984-34003 | None:intergenic | 25.0% |
| ! | TCATTGTTTAAGCCATTAAT+GGG | - | chr5.1:34230-34249 | MS.gene92384:intron | 25.0% |
| ! | TGTTTCATTTCATAAGTTTG+GGG | - | chr5.1:34100-34119 | MS.gene92384:intron | 25.0% |
| ! | TTAATGGCTTAAACAATGAA+TGG | + | chr5.1:34229-34248 | None:intergenic | 25.0% |
| ! | TTATAAAACCAATGATTTCC+AGG | + | chr5.1:34564-34583 | None:intergenic | 25.0% |
| ! | TTATTGGGAAAAATCAATCA+TGG | - | chr5.1:35901-35920 | MS.gene92384:intron | 25.0% |
| ! | TTCATTGTTTAAGCCATTAA+TGG | - | chr5.1:34229-34248 | MS.gene92384:intron | 25.0% |
| !! | ACAAATTACTGATGATGAAA+AGG | + | chr5.1:33211-33230 | None:intergenic | 25.0% |
| !! | CAATCAATTTTCCATGTAAA+AGG | + | chr5.1:35632-35651 | None:intergenic | 25.0% |
| !! | CATGAGTACTATGAATATTT+TGG | - | chr5.1:35209-35228 | MS.gene92384:intron | 25.0% |
| !! | CTCAGATATAAGTTGAAAAT+AGG | + | chr5.1:33570-33589 | None:intergenic | 25.0% |
| !! | CTTGATAATTATACACTGTA+TGG | - | chr5.1:35986-36005 | MS.gene92384:intron | 25.0% |
| !! | TAAAGGTAAACCTCTAAAAA+TGG | + | chr5.1:33237-33256 | None:intergenic | 25.0% |
| !! | TGTTTGAATATCCTTTTACA+TGG | - | chr5.1:35618-35637 | MS.gene92384:CDS | 25.0% |
| !!! | ATTGGTTTTATAACCAATAG+AGG | - | chr5.1:34571-34590 | MS.gene92384:CDS | 25.0% |
| !!! | CAGTATTCTATTTTTTAAGG+AGG | - | chr5.1:35104-35123 | MS.gene92384:intron | 25.0% |
| !!! | CTTTGCTGTTTTTTTCAATA+AGG | + | chr5.1:34926-34945 | None:intergenic | 25.0% |
| !!! | TGAAACTTGTTTTGATTTTC+AGG | - | chr5.1:36905-36924 | MS.gene92384:CDS | 25.0% |
| !!! | TGCATTATCTTGTTGATTTA+TGG | - | chr5.1:33109-33128 | MS.gene92384:intron | 25.0% |
| AAGATGATAGAGATGAAAGA+TGG | - | chr5.1:36186-36205 | MS.gene92384:intron | 30.0% | |
| AAGCTAATCACACAGTTATT+TGG | - | chr5.1:33639-33658 | MS.gene92384:CDS | 30.0% | |
| ACTAGCTGTTGTACTATATA+TGG | + | chr5.1:34762-34781 | None:intergenic | 30.0% | |
| AGATGATAGAGATGAAAGAT+GGG | - | chr5.1:36187-36206 | MS.gene92384:intron | 30.0% | |
| AGTTTCCCTTATATCTTTGA+AGG | - | chr5.1:33793-33812 | MS.gene92384:intron | 30.0% | |
| ATAATTAGGAGTGGTATAGT+TGG | - | chr5.1:34894-34913 | MS.gene92384:intron | 30.0% | |
| ATACAATAAGAAATGTGGCA+CGG | - | chr5.1:34423-34442 | MS.gene92384:intron | 30.0% | |
| ATACTTATTAAGCACGATGA+AGG | + | chr5.1:33504-33523 | None:intergenic | 30.0% | |
| ATCACAACAATAATTAGGAG+TGG | - | chr5.1:34885-34904 | MS.gene92384:intron | 30.0% | |
| ATGGAATCCAATCAATGAAA+GGG | + | chr5.1:34739-34758 | None:intergenic | 30.0% | |
| ATTTGCATTACCTTTGTGAT+TGG | - | chr5.1:33993-34012 | MS.gene92384:intron | 30.0% | |
| CATCACATATTAATGTGCAA+GGG | + | chr5.1:33301-33320 | None:intergenic | 30.0% | |
| CATTACTTATTCTAATGCCT+GGG | + | chr5.1:36457-36476 | None:intergenic | 30.0% | |
| CCGTTCTATATTAACACTAT+TGG | - | chr5.1:35130-35149 | MS.gene92384:intron | 30.0% | |
| CTATGTAAATGATATTGTGC+TGG | - | chr5.1:33037-33056 | MS.gene92384:intron | 30.0% | |
| GAGGTTGGAAACTATTATTA+TGG | - | chr5.1:32636-32655 | MS.gene92384:intron | 30.0% | |
| GATATTGCAATAAATTGGTC+TGG | - | chr5.1:32972-32991 | MS.gene92384:intron | 30.0% | |
| GCTCTTATATCATCCAATAA+AGG | + | chr5.1:35290-35309 | None:intergenic | 30.0% | |
| TAAAATCGCTACAGCTTATT+GGG | - | chr5.1:35886-35905 | MS.gene92384:intron | 30.0% | |
| TAATAATAGTTTCCAACCTC+TGG | + | chr5.1:32636-32655 | None:intergenic | 30.0% | |
| TATAGTACAACAGCTAGTAA+TGG | - | chr5.1:34764-34783 | MS.gene92384:intron | 30.0% | |
| TATGATCTACTTAAGAGCAA+TGG | + | chr5.1:35464-35483 | None:intergenic | 30.0% | |
| TCATTACTTATTCTAATGCC+TGG | + | chr5.1:36458-36477 | None:intergenic | 30.0% | |
| TGACTTTCCTGGTTTATTTA+CGG | - | chr5.1:34506-34525 | MS.gene92384:CDS | 30.0% | |
| TGGCTATACAATAAGAAATG+TGG | - | chr5.1:34418-34437 | MS.gene92384:intron | 30.0% | |
| TGTTAAAATTGCATGTCTTC+AGG | - | chr5.1:37202-37221 | MS.gene92384:CDS | 30.0% | |
| TGTTTCAATCTTTCGATCAA+AGG | - | chr5.1:34332-34351 | MS.gene92384:intron | 30.0% | |
| TTAAAATCGCTACAGCTTAT+TGG | - | chr5.1:35885-35904 | MS.gene92384:intron | 30.0% | |
| TTCAACTTATATCTGAGTTG+CGG | - | chr5.1:33573-33592 | MS.gene92384:intron | 30.0% | |
| TTGCAATATCACATATTCCA+TGG | + | chr5.1:32962-32981 | None:intergenic | 30.0% | |
| TTGTATAGTTGCACAATGTT+GGG | - | chr5.1:36853-36872 | MS.gene92384:CDS | 30.0% | |
| TTTACTAAATGATGGCACAA+TGG | - | chr5.1:36829-36848 | MS.gene92384:CDS | 30.0% | |
| TTTCTTGACCAACATTTCTA+TGG | - | chr5.1:33170-33189 | MS.gene92384:intron | 30.0% | |
| TTTGCATTACCTTTGTGATT+GGG | - | chr5.1:33994-34013 | MS.gene92384:intron | 30.0% | |
| TTTGTATAGTTGCACAATGT+TGG | - | chr5.1:36852-36871 | MS.gene92384:CDS | 30.0% | |
| ! | AAAAGTAGGACAAGTTCTTT+TGG | + | chr5.1:33718-33737 | None:intergenic | 30.0% |
| ! | AAATGTTTAAAACCACCTGA+AGG | + | chr5.1:34981-35000 | None:intergenic | 30.0% |
| ! | CACTTTTCCTAGTTTATTGT+TGG | - | chr5.1:34477-34496 | MS.gene92384:CDS | 30.0% |
| !! | ATTTTGACATGGATGTTGAT+AGG | - | chr5.1:36216-36235 | MS.gene92384:intron | 30.0% |
| !!! | CTTTTTCAAGGTGAATAAGT+GGG | + | chr5.1:37098-37117 | None:intergenic | 30.0% |
| !!! | TGTGCTACAGGATTTTAATT+TGG | - | chr5.1:33133-33152 | MS.gene92384:intron | 30.0% |
| !!! | TTCTTGTTTTCCATGTTACT+AGG | + | chr5.1:35260-35279 | None:intergenic | 30.0% |
| !!! | TTTTTCAAGGTGAATAAGTG+GGG | + | chr5.1:37097-37116 | None:intergenic | 30.0% |
| ACATGCATTGTGATATGTAG+GGG | - | chr5.1:37050-37069 | MS.gene92384:CDS | 35.0% | |
| AGAGTAAAGACCATCAAACA+CGG | + | chr5.1:32889-32908 | None:intergenic | 35.0% | |
| AGATATTGCTACACCTTTCA+AGG | - | chr5.1:36959-36978 | MS.gene92384:CDS | 35.0% | |
| ATCAGATTAGACAGTTGAAG+AGG | - | chr5.1:32841-32860 | MS.gene92384:intron | 35.0% | |
| ATCATCAATTCCATCATCCA+AGG | + | chr5.1:34198-34217 | None:intergenic | 35.0% | |
| CAAAGCAAAGAAAACAGGTT+AGG | + | chr5.1:36377-36396 | None:intergenic | 35.0% | |
| CAAATGCAACTTTGACAGTT+TGG | + | chr5.1:35808-35827 | None:intergenic | 35.0% | |
| CAGTTGAAGAGGTTTAATGT+TGG | - | chr5.1:32852-32871 | MS.gene92384:intron | 35.0% | |
| CCACTTATTCACCTTGAAAA+AGG | - | chr5.1:37096-37115 | MS.gene92384:CDS | 35.0% | |
| CCATTCCATAAACATGTATG+AGG | - | chr5.1:35942-35961 | MS.gene92384:intron | 35.0% | |
| CCTCATACATGTTTATGGAA+TGG | + | chr5.1:35945-35964 | None:intergenic | 35.0% | |
| CGAATTCTATGTGGTTTCAT+CGG | + | chr5.1:32672-32691 | None:intergenic | 35.0% | |
| CGTGATATTGGATATGGTAA+AGG | - | chr5.1:34149-34168 | MS.gene92384:intron | 35.0% | |
| GAAAATAGGTAGCAATTACG+CGG | + | chr5.1:33556-33575 | None:intergenic | 35.0% | |
| GAAAGACAGACTATCAAGAT+GGG | + | chr5.1:36262-36281 | None:intergenic | 35.0% | |
| GAATTCTATGTGGTTTCATC+GGG | + | chr5.1:32671-32690 | None:intergenic | 35.0% | |
| GACATGCATTGTGATATGTA+GGG | - | chr5.1:37049-37068 | MS.gene92384:CDS | 35.0% | |
| GATCTACTTTAGCGAGTATA+AGG | + | chr5.1:35570-35589 | None:intergenic | 35.0% | |
| GATGGAATCCAATCAATGAA+AGG | + | chr5.1:34740-34759 | None:intergenic | 35.0% | |
| GATGTTCGTGATATTGGATA+TGG | - | chr5.1:34143-34162 | MS.gene92384:intron | 35.0% | |
| GCATCACATATTAATGTGCA+AGG | + | chr5.1:33302-33321 | None:intergenic | 35.0% | |
| GCTGTTGTACTATATATGGA+TGG | + | chr5.1:34758-34777 | None:intergenic | 35.0% | |
| GGAAACTATTATTATGGGCA+GGG | - | chr5.1:32642-32661 | MS.gene92384:intron | 35.0% | |
| GGATTAACAAAACGCAGTAA+TGG | + | chr5.1:35751-35770 | None:intergenic | 35.0% | |
| GTTTAAGCCATTAATGGGAA+AGG | - | chr5.1:34235-34254 | MS.gene92384:intron | 35.0% | |
| TACTTTAGCGAGTATAAGGT+TGG | + | chr5.1:35566-35585 | None:intergenic | 35.0% | |
| TATTCATAGTACTCATGCTG+AGG | + | chr5.1:35206-35225 | None:intergenic | 35.0% | |
| TATTGATGCCTGGAAATCAT+TGG | - | chr5.1:34553-34572 | MS.gene92384:CDS | 35.0% | |
| TCAACAAGATAATGCAGGAA+AGG | + | chr5.1:33105-33124 | None:intergenic | 35.0% | |
| TCAACTTATATCTGAGTTGC+GGG | - | chr5.1:33574-33593 | MS.gene92384:intron | 35.0% | |
| TCATCAATTCCATCATCCAA+GGG | + | chr5.1:34197-34216 | None:intergenic | 35.0% | |
| TCTTTATCTGGAGATAGGTT+AGG | - | chr5.1:34308-34327 | MS.gene92384:intron | 35.0% | |
| TGAAAGACAGACTATCAAGA+TGG | + | chr5.1:36263-36282 | None:intergenic | 35.0% | |
| TGATATGTCGTTCGCATAAA+TGG | - | chr5.1:33341-33360 | MS.gene92384:intron | 35.0% | |
| TGGAAACTATTATTATGGGC+AGG | - | chr5.1:32641-32660 | MS.gene92384:intron | 35.0% | |
| TGTTGCAAAGCAAAGAAAAC+AGG | + | chr5.1:36382-36401 | None:intergenic | 35.0% | |
| TTATTCACTGAATGTTCCCT+TGG | - | chr5.1:34178-34197 | MS.gene92384:intron | 35.0% | |
| TTCAACTTTGTCAGCCAAAA+GGG | + | chr5.1:36889-36908 | None:intergenic | 35.0% | |
| TTCTCACAACTGACTATTAG+CGG | - | chr5.1:34648-34667 | MS.gene92384:CDS | 35.0% | |
| TTGATTTATGGTTGTGCTAC+AGG | - | chr5.1:33121-33140 | MS.gene92384:intron | 35.0% | |
| TTTCAACTTTGTCAGCCAAA+AGG | + | chr5.1:36890-36909 | None:intergenic | 35.0% | |
| ! | ATGAGTACAATATAGTGGGA+TGG | - | chr5.1:36474-36493 | MS.gene92384:intron | 35.0% |
| ! | ATTGCAATAAATTGGTCTGG+TGG | - | chr5.1:32975-32994 | MS.gene92384:intron | 35.0% |
| ! | GTTGGTAAATTTGACTTTCC+TGG | - | chr5.1:34495-34514 | MS.gene92384:CDS | 35.0% |
| ! | TAACGGACAAAACATTACCT+TGG | + | chr5.1:36997-37016 | None:intergenic | 35.0% |
| ! | TATTTTTCCCTTGTTGCTGA+TGG | - | chr5.1:33758-33777 | MS.gene92384:intron | 35.0% |
| ! | TCTTGATAGTCTGTCTTTCA+AGG | - | chr5.1:36263-36282 | MS.gene92384:intron | 35.0% |
| ! | TGTGTCATTCGAATTCTATG+TGG | + | chr5.1:32681-32700 | None:intergenic | 35.0% |
| ! | TTACTTGGTGAACATATGCT+AGG | + | chr5.1:34843-34862 | None:intergenic | 35.0% |
| ! | TTCATATTTCTACGATCCAG+AGG | - | chr5.1:32617-32636 | MS.gene92384:CDS | 35.0% |
| !! | GCTAGAATTCACCTTTTTCA+AGG | + | chr5.1:37110-37129 | None:intergenic | 35.0% |
| !! | TTACTGCGTTTTGTTAATCC+AGG | - | chr5.1:35751-35770 | MS.gene92384:CDS | 35.0% |
| !! | TTGACGATTAGTCTTTACTG+TGG | - | chr5.1:33856-33875 | MS.gene92384:intron | 35.0% |
| !!! | CCTTTTTCAAGGTGAATAAG+TGG | + | chr5.1:37099-37118 | None:intergenic | 35.0% |
| !!! | GGGTTTATTTATTTTGGGAC+CGG | - | chr5.1:36772-36791 | MS.gene92384:intron | 35.0% |
| !!! | TGATATTGTGCTGGCTATTT+TGG | - | chr5.1:33046-33065 | MS.gene92384:intron | 35.0% |
| AAAGGTGAATTCTAGCCACT+AGG | - | chr5.1:37114-37133 | MS.gene92384:CDS | 40.0% | |
| AAGTTTGGGGATTACTTTCC+TGG | - | chr5.1:34113-34132 | MS.gene92384:intron | 40.0% | |
| AATGTTCCTCTTCTGTTGCT+CGG | - | chr5.1:34389-34408 | MS.gene92384:intron | 40.0% | |
| ACAGGAGATGTTCGTGATAT+TGG | - | chr5.1:34137-34156 | MS.gene92384:intron | 40.0% | |
| ACCATTCATCAAAGAAGAGC+AGG | - | chr5.1:37262-37281 | MS.gene92384:CDS | 40.0% | |
| ACCTCTTGAAGCTCAGTATT+TGG | + | chr5.1:35377-35396 | None:intergenic | 40.0% | |
| AGGCATCAATACTCACTGTT+TGG | + | chr5.1:34544-34563 | None:intergenic | 40.0% | |
| AGTTAGGGATGGATATACGA+AGG | + | chr5.1:35523-35542 | None:intergenic | 40.0% | |
| ATAAGACCTGTCTAGTCTAG+TGG | - | chr5.1:37179-37198 | MS.gene92384:CDS | 40.0% | |
| CAACAGAAGAGGAACATTGA+AGG | + | chr5.1:34387-34406 | None:intergenic | 40.0% | |
| CAACATTTCAGAGCCTCTAT+TGG | + | chr5.1:34587-34606 | None:intergenic | 40.0% | |
| CGCGGCAAAAAATAAACTAC+TGG | + | chr5.1:33538-33557 | None:intergenic | 40.0% | |
| CTATTGGATGTTGATCAGAC+AGG | - | chr5.1:35146-35165 | MS.gene92384:intron | 40.0% | |
| CTGACTCTTTATCTGGAGAT+AGG | - | chr5.1:34303-34322 | MS.gene92384:intron | 40.0% | |
| GACCCTATCAGTTGTGTAAA+AGG | + | chr5.1:34075-34094 | None:intergenic | 40.0% | |
| GAGTAAAGACCATCAAACAC+GGG | + | chr5.1:32888-32907 | None:intergenic | 40.0% | |
| GATAGGTATTCTCGTGTTTC+TGG | - | chr5.1:36233-36252 | MS.gene92384:intron | 40.0% | |
| GCACTCCTCATACATGTTTA+TGG | + | chr5.1:35950-35969 | None:intergenic | 40.0% | |
| GCGGGAGATGTTAAATTCTA+CGG | - | chr5.1:34667-34686 | MS.gene92384:CDS | 40.0% | |
| GGACATGCATTGTGATATGT+AGG | - | chr5.1:37048-37067 | MS.gene92384:CDS | 40.0% | |
| GGCAATGGAACATAAACTGA+TGG | + | chr5.1:34718-34737 | None:intergenic | 40.0% | |
| GGCATCAATACTCACTGTTT+GGG | + | chr5.1:34543-34562 | None:intergenic | 40.0% | |
| GGGGTTCTCATAATAGATGA+AGG | - | chr5.1:33462-33481 | MS.gene92384:intron | 40.0% | |
| GGTGCTCTTAAATTGAACCA+TGG | - | chr5.1:32942-32961 | MS.gene92384:intron | 40.0% | |
| GTTTATGGAATGGCCATGTT+TGG | + | chr5.1:35935-35954 | None:intergenic | 40.0% | |
| GTTTCTTGAAATGAGCGACA+TGG | + | chr5.1:33672-33691 | None:intergenic | 40.0% | |
| TACCTAGTGGAAAACAGAAC+TGG | - | chr5.1:36694-36713 | MS.gene92384:intron | 40.0% | |
| TCAAATGCCATCAGCAACAA+GGG | + | chr5.1:33768-33787 | None:intergenic | 40.0% | |
| TCCAAATACTGAGCTTCAAG+AGG | - | chr5.1:35373-35392 | MS.gene92384:intron | 40.0% | |
| TCCAATCAATGAAAGGGCAA+TGG | + | chr5.1:34733-34752 | None:intergenic | 40.0% | |
| TCCATCACCTTTCCCATTAA+TGG | + | chr5.1:34245-34264 | None:intergenic | 40.0% | |
| TCCATTGCCCTTTCATTGAT+TGG | - | chr5.1:34729-34748 | MS.gene92384:intron | 40.0% | |
| TCCTGCTCTTCTTTGATGAA+TGG | + | chr5.1:37266-37285 | None:intergenic | 40.0% | |
| TCTCACAACTGACTATTAGC+GGG | - | chr5.1:34649-34668 | MS.gene92384:CDS | 40.0% | |
| TCTTGAAGCTCAGTATTTGG+AGG | + | chr5.1:35374-35393 | None:intergenic | 40.0% | |
| TGAAGCTGAGCATAAAGACA+TGG | - | chr5.1:36346-36365 | MS.gene92384:intron | 40.0% | |
| TTAACACCACTAGACTAGAC+AGG | + | chr5.1:37188-37207 | None:intergenic | 40.0% | |
| TTCAAATGCCATCAGCAACA+AGG | + | chr5.1:33769-33788 | None:intergenic | 40.0% | |
| TTGATTAAGAGTCCAACCGA+GGG | + | chr5.1:36575-36594 | None:intergenic | 40.0% | |
| TTTGATTAAGAGTCCAACCG+AGG | + | chr5.1:36576-36595 | None:intergenic | 40.0% | |
| ! | AACCAGTTCTGTTTTCCACT+AGG | + | chr5.1:36699-36718 | None:intergenic | 40.0% |
| ! | AGGCCTTTTACACAACTGAT+AGG | - | chr5.1:34069-34088 | MS.gene92384:intron | 40.0% |
| ! | AGTTCTGTTTTCCACTAGGT+AGG | + | chr5.1:36695-36714 | None:intergenic | 40.0% |
| ! | ATACTCACTGTTTGGGATGA+AGG | + | chr5.1:34536-34555 | None:intergenic | 40.0% |
| ! | ATCTGATCTTGCTGTGTTTC+AGG | + | chr5.1:32828-32847 | None:intergenic | 40.0% |
| ! | ATTAATGGGAAAGGTGATGG+AGG | - | chr5.1:34244-34263 | MS.gene92384:intron | 40.0% |
| ! | CTTTTTGCCAGACATATGCA+GGG | - | chr5.1:32907-32926 | MS.gene92384:CDS | 40.0% |
| ! | GGCCTTTTACACAACTGATA+GGG | - | chr5.1:34070-34089 | MS.gene92384:intron | 40.0% |
| ! | GTTCTGTTTTCCACTAGGTA+GGG | + | chr5.1:36694-36713 | None:intergenic | 40.0% |
| ! | TATTTCTACGATCCAGAGGT+TGG | - | chr5.1:32621-32640 | MS.gene92384:CDS | 40.0% |
| ! | TCTGATCTTGCTGTGTTTCA+GGG | + | chr5.1:32827-32846 | None:intergenic | 40.0% |
| ! | TCTTTTTGCCAGACATATGC+AGG | - | chr5.1:32906-32925 | MS.gene92384:CDS | 40.0% |
| ! | TGGGAAGAATTGATCCCTTT+TGG | - | chr5.1:36872-36891 | MS.gene92384:CDS | 40.0% |
| ! | TTTACTGTGGCTGGTTACTT+TGG | - | chr5.1:33869-33888 | MS.gene92384:intron | 40.0% |
| ! | TTTTTGCCAGACATATGCAG+GGG | - | chr5.1:32908-32927 | MS.gene92384:CDS | 40.0% |
| !! | AAACAGTGAGTATTGATGCC+TGG | - | chr5.1:34543-34562 | MS.gene92384:CDS | 40.0% |
| !! | ACAAATGGACTAATGCCTTC+AGG | - | chr5.1:34963-34982 | MS.gene92384:intron | 40.0% |
| !! | ATGGGATCGTGATTTTGACA+TGG | - | chr5.1:36205-36224 | MS.gene92384:intron | 40.0% |
| !! | GTTTTGTTAATCCAGGTGGA+TGG | - | chr5.1:35758-35777 | MS.gene92384:CDS | 40.0% |
| !!! | ATGACTACGTGGCTTTTTTG+AGG | - | chr5.1:32793-32812 | MS.gene92384:intron | 40.0% |
| !!! | TGACTACGTGGCTTTTTTGA+GGG | - | chr5.1:32794-32813 | MS.gene92384:intron | 40.0% |
| !!! | TTTTTTGTCAGGTAGCCTAG+TGG | + | chr5.1:37132-37151 | None:intergenic | 40.0% |
| ACAGCAATTCTCTTGCACGA+AGG | - | chr5.1:36306-36325 | MS.gene92384:intron | 45.0% | |
| ACTGCAGCAACAAAGCTATC+AGG | + | chr5.1:36521-36540 | None:intergenic | 45.0% | |
| AGGTGGTCCGTAAATAAACC+AGG | + | chr5.1:34516-34535 | None:intergenic | 45.0% | |
| ATCGATATCCACCATGGTGA+TGG | - | chr5.1:34038-34057 | MS.gene92384:intron | 45.0% | |
| ATGCCTGGGTATTAGATCTG+AGG | + | chr5.1:36443-36462 | None:intergenic | 45.0% | |
| ATTGCATGTCTTCAGGTGAC+AGG | - | chr5.1:37209-37228 | MS.gene92384:CDS | 45.0% | |
| CAAGAAACAGAACTTGCGTC+CGG | + | chr5.1:36794-36813 | None:intergenic | 45.0% | |
| CAAGAACTCTCGCCCTTTAT+TGG | - | chr5.1:35274-35293 | MS.gene92384:intron | 45.0% | |
| CAGCAATTCTCTTGCACGAA+GGG | - | chr5.1:36307-36326 | MS.gene92384:intron | 45.0% | |
| CAGTATTTGGAGGTCTCTCT+TGG | + | chr5.1:35364-35383 | None:intergenic | 45.0% | |
| CGTGCAAGCCATAGAAATGT+TGG | + | chr5.1:33181-33200 | None:intergenic | 45.0% | |
| CTCTCTTGGAATGGAACACT+TGG | + | chr5.1:35350-35369 | None:intergenic | 45.0% | |
| CTGAATGTTCCCTTGGATGA+TGG | - | chr5.1:34185-34204 | MS.gene92384:intron | 45.0% | |
| GAGCATGCAATCTCCTTGAA+AGG | + | chr5.1:36975-36994 | None:intergenic | 45.0% | |
| GCCATTAATGGGAAAGGTGA+TGG | - | chr5.1:34241-34260 | MS.gene92384:intron | 45.0% | |
| GGAACTTCTCAAGATACACG+AGG | - | chr5.1:33067-33086 | MS.gene92384:intron | 45.0% | |
| GTGTTGAAGCAACCCATAGT+GGG | + | chr5.1:32715-32734 | None:intergenic | 45.0% | |
| TAAGAAATGTGGCACGGTGT+TGG | - | chr5.1:34429-34448 | MS.gene92384:intron | 45.0% | |
| TCACGTTGCTCCTAGTAACA+TGG | - | chr5.1:35247-35266 | MS.gene92384:intron | 45.0% | |
| TGACCTCAGATCTAATACCC+AGG | - | chr5.1:36437-36456 | MS.gene92384:intron | 45.0% | |
| TGTGTTGAAGCAACCCATAG+TGG | + | chr5.1:32716-32735 | None:intergenic | 45.0% | |
| TTAAACGTGTTCCATCCACC+TGG | + | chr5.1:35772-35791 | None:intergenic | 45.0% | |
| TTCTATGTGGTTTCATCGGG+TGG | + | chr5.1:32668-32687 | None:intergenic | 45.0% | |
| TTGCATGTCTTCAGGTGACA+GGG | - | chr5.1:37210-37229 | MS.gene92384:CDS | 45.0% | |
| TTTGGAGGTCTCTCTTGGAA+TGG | + | chr5.1:35359-35378 | None:intergenic | 45.0% | |
| ! | ACGCTCTTTTAGCCCACTAT+GGG | - | chr5.1:32700-32719 | MS.gene92384:intron | 45.0% |
| ! | CTGATCTTGCTGTGTTTCAG+GGG | + | chr5.1:32826-32845 | None:intergenic | 45.0% |
| ! | TAGCGAGTATAAGGTTGGCT+CGG | + | chr5.1:35561-35580 | None:intergenic | 45.0% |
| ! | TTTTGCCAGACATATGCAGG+GGG | - | chr5.1:32909-32928 | MS.gene92384:CDS | 45.0% |
| !! | AATGGACTAATGCCTTCAGG+TGG | - | chr5.1:34966-34985 | MS.gene92384:intron | 45.0% |
| !! | ATGAAGGATTAGTCCACCCT+CGG | - | chr5.1:36556-36575 | MS.gene92384:intron | 45.0% |
| !! | CGATTAGTCTTTACTGTGGC+TGG | - | chr5.1:33860-33879 | MS.gene92384:intron | 45.0% |
| !! | CTGCGTTTTGTTAATCCAGG+TGG | - | chr5.1:35754-35773 | MS.gene92384:CDS | 45.0% |
| !! | GGTGCAAACTTTGCTGTTCA+TGG | - | chr5.1:35664-35683 | MS.gene92384:CDS | 45.0% |
| !! | GTGATGGAGGTTTTTAGACC+TGG | - | chr5.1:34257-34276 | MS.gene92384:intron | 45.0% |
| !! | TGTGGTGCTGACTCTTTATC+TGG | - | chr5.1:34296-34315 | MS.gene92384:intron | 45.0% |
| !!! | GACTACGTGGCTTTTTTGAG+GGG | - | chr5.1:32795-32814 | MS.gene92384:intron | 45.0% |
| !! | ATATATTAATCTAATATATT+AGG | - | chr5.1:35021-35040 | MS.gene92384:intron | 5.0% |
| !! | TTTATATTATAGTTTATTAA+CGG | + | chr5.1:37014-37033 | None:intergenic | 5.0% |
| !!! | AATATTTTAATATAAAACAT+CGG | + | chr5.1:33951-33970 | None:intergenic | 5.0% |
| !!! | TTAATATATTAGATTTTAAA+AGG | + | chr5.1:35010-35029 | None:intergenic | 5.0% |
| AACACGCTGCCCAATCACAA+AGG | + | chr5.1:34006-34025 | None:intergenic | 50.0% | |
| AACCTACTGCCGCTAAAGAC+AGG | - | chr5.1:32748-32767 | MS.gene92384:intron | 50.0% | |
| AAGCCACGTAGTCATCAGCA+TGG | + | chr5.1:32788-32807 | None:intergenic | 50.0% | |
| ACATATGCAGGGGGTTCTGT+TGG | - | chr5.1:32918-32937 | MS.gene92384:CDS | 50.0% | |
| ACCTACTGCCGCTAAAGACA+GGG | - | chr5.1:32749-32768 | MS.gene92384:intron | 50.0% | |
| ATTAAGAGTCCAACCGAGGG+TGG | + | chr5.1:36572-36591 | None:intergenic | 50.0% | |
| ATTGTGATATGTAGGGGCCG+GGG | - | chr5.1:37056-37075 | MS.gene92384:CDS | 50.0% | |
| CAAGGAGATTGCATGCTCCA+AGG | - | chr5.1:36977-36996 | MS.gene92384:CDS | 50.0% | |
| CATCAGCATGGAACTTGCAG+AGG | + | chr5.1:32776-32795 | None:intergenic | 50.0% | |
| CATGGCATGCAGACCAAACA+TGG | - | chr5.1:35919-35938 | MS.gene92384:intron | 50.0% | |
| CATTGCAATACCACAGCACC+AGG | + | chr5.1:34278-34297 | None:intergenic | 50.0% | |
| CATTGTGATATGTAGGGGCC+GGG | - | chr5.1:37055-37074 | MS.gene92384:CDS | 50.0% | |
| GAAGACTGTCCCGTGTTTGA+TGG | - | chr5.1:32876-32895 | MS.gene92384:CDS | 50.0% | |
| GCATTGTGATATGTAGGGGC+CGG | - | chr5.1:37054-37073 | MS.gene92384:CDS | 50.0% | |
| GGGGATTACTTTCCTGGAAC+AGG | - | chr5.1:34119-34138 | MS.gene92384:intron | 50.0% | |
| GTGGACATCGATATCCACCA+TGG | - | chr5.1:34032-34051 | MS.gene92384:intron | 50.0% | |
| GTGGATTCAATGGCTGTGGA+TGG | - | chr5.1:37239-37258 | MS.gene92384:CDS | 50.0% | |
| GTTCCATGCTGATGACTACG+TGG | - | chr5.1:32782-32801 | MS.gene92384:intron | 50.0% | |
| TCACGAACATCTCCTGTTCC+AGG | + | chr5.1:34134-34153 | None:intergenic | 50.0% | |
| TGGGCAGCGTGTTCTATATG+TGG | - | chr5.1:34013-34032 | MS.gene92384:intron | 50.0% | |
| TGGGTTGCTTCAACACATGC+AGG | - | chr5.1:32719-32738 | MS.gene92384:intron | 50.0% | |
| TTCACACCATCTGACCCTGA+TGG | + | chr5.1:32588-32607 | None:intergenic | 50.0% | |
| ! | ACATCACGCCAAAAAGTGCG+AGG | - | chr5.1:33001-33020 | MS.gene92384:intron | 50.0% |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr5.1:37090-37109 | None:intergenic | 50.0% |
| ! | CACGCTCTTTTAGCCCACTA+TGG | - | chr5.1:32699-32718 | MS.gene92384:intron | 50.0% |
| ! | CCAAAAAGTGCGAGGCTTCT+GGG | - | chr5.1:33009-33028 | MS.gene92384:intron | 50.0% |
| ! | CTCACTGTTTGGGATGAAGG+TGG | + | chr5.1:34533-34552 | None:intergenic | 50.0% |
| ! | GAGTTGCGGGTTTGTTCTGT+GGG | - | chr5.1:33587-33606 | MS.gene92384:intron | 50.0% |
| ! | GCAACGTGAAGAGCATAGTC+TGG | + | chr5.1:35236-35255 | None:intergenic | 50.0% |
| ! | GGTGCTGTGGTATTGCAATG+TGG | - | chr5.1:34278-34297 | MS.gene92384:intron | 50.0% |
| ! | GTTTTCCACTAGGTAGGGAG+AGG | + | chr5.1:36689-36708 | None:intergenic | 50.0% |
| ! | TGAGTTGCGGGTTTGTTCTG+TGG | - | chr5.1:33586-33605 | MS.gene92384:intron | 50.0% |
| !! | ATCAGACAGGTGTTGCTCTC+GGG | - | chr5.1:35159-35178 | MS.gene92384:intron | 50.0% |
| !! | GATCAGACAGGTGTTGCTCT+CGG | - | chr5.1:35158-35177 | MS.gene92384:intron | 50.0% |
| !! | GGTTTTTAGACCTGGTGCTG+TGG | - | chr5.1:34265-34284 | MS.gene92384:intron | 50.0% |
| AGTAGCCTCTCCCTACCTAG+TGG | - | chr5.1:36681-36700 | MS.gene92384:intron | 55.0% | |
| CACAGCCATTGAATCCACCC+CGG | + | chr5.1:37237-37256 | None:intergenic | 55.0% | |
| CAGAACCCCCTGCATATGTC+TGG | + | chr5.1:32917-32936 | None:intergenic | 55.0% | |
| CAGTTGAGGTGGGGGAGTTA+GGG | + | chr5.1:35538-35557 | None:intergenic | 55.0% | |
| CCTCCTCTACACCATCACCA+TGG | + | chr5.1:34052-34071 | None:intergenic | 55.0% | |
| CCTCTACACCATCACCATGG+TGG | + | chr5.1:34049-34068 | None:intergenic | 55.0% | |
| GAGGGAACTCGCTTCCATCA+GGG | - | chr5.1:32571-32590 | MS.gene92384:CDS | 55.0% | |
| GCAGAGGTCCCTGTCTTTAG+CGG | + | chr5.1:32760-32779 | None:intergenic | 55.0% | |
| GTTCCTCTTCTGTTGCTCGG+TGG | - | chr5.1:34392-34411 | MS.gene92384:intron | 55.0% | |
| TATGCAGGGGGTTCTGTTGG+CGG | - | chr5.1:32921-32940 | MS.gene92384:CDS | 55.0% | |
| TCCCTGTCTTTAGCGGCAGT+AGG | + | chr5.1:32753-32772 | None:intergenic | 55.0% | |
| TCGCTTCCATCAGGGTCAGA+TGG | - | chr5.1:32579-32598 | MS.gene92384:CDS | 55.0% | |
| TGTCTTCAGGTGACAGGGTC+CGG | - | chr5.1:37215-37234 | MS.gene92384:CDS | 55.0% | |
| ! | CCCAGAAGCCTCGCACTTTT+TGG | + | chr5.1:33012-33031 | None:intergenic | 55.0% |
| ! | GCCAAAAAGTGCGAGGCTTC+TGG | - | chr5.1:33008-33027 | MS.gene92384:intron | 55.0% |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr5.1:37089-37108 | None:intergenic | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr5.1:37088-37107 | None:intergenic | 55.0% |
| !! | AGGATTAGTCCACCCTCGGT+TGG | - | chr5.1:36560-36579 | MS.gene92384:intron | 55.0% |
| !! | CCACCATGGTGATGGTGTAG+AGG | - | chr5.1:34046-34065 | MS.gene92384:intron | 55.0% |
| !! | CCATGGTGATGGTGTAGAGG+AGG | - | chr5.1:34049-34068 | MS.gene92384:intron | 55.0% |
| !! | GGCACGGTGTTGGTGTTATG+AGG | - | chr5.1:34439-34458 | MS.gene92384:intron | 55.0% |
| !! | TAAGGTTGGCTCGGCAGTTG+AGG | + | chr5.1:35552-35571 | None:intergenic | 55.0% |
| CCTCCACCGAGCAACAGAAG+AGG | + | chr5.1:34398-34417 | None:intergenic | 60.0% | |
| GCAGTTGAGGTGGGGGAGTT+AGG | + | chr5.1:35539-35558 | None:intergenic | 60.0% | |
| GGAGGGAACTCGCTTCCATC+AGG | - | chr5.1:32570-32589 | MS.gene92384:CDS | 60.0% | |
| GTCTTCAGGTGACAGGGTCC+GGG | - | chr5.1:37216-37235 | MS.gene92384:CDS | 60.0% | |
| TCTTCAGGTGACAGGGTCCG+GGG | - | chr5.1:37217-37236 | MS.gene92384:CDS | 60.0% | |
| TGAGGTGGGGGAGTTAGGGA+TGG | + | chr5.1:35534-35553 | None:intergenic | 60.0% | |
| ! | AGGGTCCGGGGTGGATTCAA+TGG | - | chr5.1:37229-37248 | MS.gene92384:CDS | 60.0% |
| ! | CCTCTTCTGTTGCTCGGTGG+AGG | - | chr5.1:34395-34414 | MS.gene92384:intron | 60.0% |
| ! | CGGGGTGGATTCAATGGCTG+TGG | - | chr5.1:37235-37254 | MS.gene92384:CDS | 60.0% |
| ! | CTTCTGTTGCTCGGTGGAGG+TGG | - | chr5.1:34398-34417 | MS.gene92384:intron | 60.0% |
| !! | GTTGGCTCGGCAGTTGAGGT+GGG | + | chr5.1:35548-35567 | None:intergenic | 60.0% |
| !! | TTGGCTCGGCAGTTGAGGTG+GGG | + | chr5.1:35547-35566 | None:intergenic | 60.0% |
| ! | TGGCTCGGCAGTTGAGGTGG+GGG | + | chr5.1:35546-35565 | None:intergenic | 65.0% |
| !! | GGTTGGCTCGGCAGTTGAGG+TGG | + | chr5.1:35549-35568 | None:intergenic | 65.0% |
| GGTGTCCGGGGTTCGAACCC+CGG | + | chr5.1:37076-37095 | None:intergenic | 70.0% | |
| TCAGGTGACAGGGTCCGGGG+TGG | - | chr5.1:37220-37239 | MS.gene92384:CDS | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | - | chr5.1:37068-37087 | MS.gene92384:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 32555 | 37316 | 32555 | ID=MS.gene92384 |
| chr5.1 | mRNA | 32555 | 37316 | 32555 | ID=MS.gene92384.t1;Parent=MS.gene92384 |
| chr5.1 | exon | 36783 | 37316 | 36783 | ID=MS.gene92384.t1.exon1;Parent=MS.gene92384.t1 |
| chr5.1 | CDS | 36783 | 37316 | 36783 | ID=cds.MS.gene92384.t1;Parent=MS.gene92384.t1 |
| chr5.1 | exon | 35411 | 35851 | 35411 | ID=MS.gene92384.t1.exon2;Parent=MS.gene92384.t1 |
| chr5.1 | CDS | 35411 | 35851 | 35411 | ID=cds.MS.gene92384.t1;Parent=MS.gene92384.t1 |
| chr5.1 | exon | 34477 | 34707 | 34477 | ID=MS.gene92384.t1.exon3;Parent=MS.gene92384.t1 |
| chr5.1 | CDS | 34477 | 34707 | 34477 | ID=cds.MS.gene92384.t1;Parent=MS.gene92384.t1 |
| chr5.1 | exon | 33634 | 33698 | 33634 | ID=MS.gene92384.t1.exon4;Parent=MS.gene92384.t1 |
| chr5.1 | CDS | 33634 | 33698 | 33634 | ID=cds.MS.gene92384.t1;Parent=MS.gene92384.t1 |
| chr5.1 | exon | 33504 | 33561 | 33504 | ID=MS.gene92384.t1.exon5;Parent=MS.gene92384.t1 |
| chr5.1 | CDS | 33504 | 33561 | 33504 | ID=cds.MS.gene92384.t1;Parent=MS.gene92384.t1 |
| chr5.1 | exon | 32873 | 32944 | 32873 | ID=MS.gene92384.t1.exon6;Parent=MS.gene92384.t1 |
| chr5.1 | CDS | 32873 | 32944 | 32873 | ID=cds.MS.gene92384.t1;Parent=MS.gene92384.t1 |
| chr5.1 | exon | 32555 | 32647 | 32555 | ID=MS.gene92384.t1.exon7;Parent=MS.gene92384.t1 |
| chr5.1 | CDS | 32555 | 32647 | 32555 | ID=cds.MS.gene92384.t1;Parent=MS.gene92384.t1 |
| Gene Sequence |
| Protein sequence |
