Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92385.t1 | RHN53206.1 | 88.3 | 742 | 64 | 3 | 1 | 736 | 1 | 725 | 7.70E-296 | 1026.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92385.t1 | A0A396HIY5 | 88.3 | 742 | 64 | 3 | 1 | 736 | 1 | 725 | 5.5e-296 | 1026.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene92385 | 0.804458 | 2.14E-49 | -1.69E-46 |
| MS.gene050257 | MS.gene92385 | 0.825163 | 5.44E-54 | -1.69E-46 |
| MS.gene050258 | MS.gene92385 | 0.8346 | 2.73E-56 | -1.69E-46 |
| MS.gene050945 | MS.gene92385 | 0.80602 | 1.01E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene92385 | 0.827007 | 1.98E-54 | -1.69E-46 |
| MS.gene052514 | MS.gene92385 | 0.81818 | 2.24E-52 | -1.69E-46 |
| MS.gene055339 | MS.gene92385 | 0.810563 | 1.08E-50 | -1.69E-46 |
| MS.gene056519 | MS.gene92385 | 0.801347 | 9.40E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene92385 | 0.846445 | 2.16E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92385.t1 | MTR_5g004630 | 92.204 | 744 | 31 | 7 | 1 | 736 | 1 | 725 | 0.0 | 1195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92385.t1 | AT5G25070 | 43.915 | 756 | 372 | 9 | 3 | 731 | 1 | 731 | 1.04e-169 | 506 |
Find 146 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCGCTGGTTGTTCAATT+TGG | 0.072315 | 5.1:-27661 | None:intergenic |
| CTTCACAAGCTTGTTCTAAT+TGG | 0.219788 | 5.1:-28324 | None:intergenic |
| AAGAAACGTTCCAGAAAATA+AGG | 0.230695 | 5.1:+28161 | MS.gene92385:CDS |
| CGGAAGACATTTCAAATTTA+CGG | 0.241495 | 5.1:+30821 | MS.gene92385:CDS |
| CTTCGACATCACCCATTTCT+TGG | 0.247970 | 5.1:-30720 | None:intergenic |
| CTCCGCTGGTTGTTCAATTT+GGG | 0.269064 | 5.1:-27660 | None:intergenic |
| TGCTGCCAGAGCTTCCTTGC+AGG | 0.286964 | 5.1:+29674 | MS.gene92385:CDS |
| ATTTAGCCTCACTAGCTATT+CGG | 0.313696 | 5.1:-30489 | None:intergenic |
| CAATGATGTTGCTTTCTTCA+TGG | 0.350218 | 5.1:-29034 | None:intergenic |
| CATGGAAGGTGGCGGAGATA+TGG | 0.351142 | 5.1:+27598 | MS.gene92385:CDS |
| CTTCTTCAGTGACAGAGTTT+CGG | 0.353431 | 5.1:-29430 | None:intergenic |
| ATCATTGCATTCAAAAGAAA+TGG | 0.355098 | 5.1:+29050 | MS.gene92385:CDS |
| AATTGATAACCTTCTCGTTC+AGG | 0.357533 | 5.1:+29458 | MS.gene92385:CDS |
| AAGCTTGAGGAAGAAATTAA+AGG | 0.359557 | 5.1:+30574 | MS.gene92385:CDS |
| GAAAATAATCCTCTGCTTGA+AGG | 0.366556 | 5.1:-30392 | None:intergenic |
| ACGGAAAGATTTGATTTCAA+TGG | 0.376880 | 5.1:+30840 | MS.gene92385:CDS |
| TGAAGGATGCTATGTCTTGC+TGG | 0.381178 | 5.1:-30375 | None:intergenic |
| CAAATCTAAAGCATCGATAA+AGG | 0.394085 | 5.1:-28443 | None:intergenic |
| GAGTGTGCTAATGGATGAAT+TGG | 0.396769 | 5.1:+29230 | MS.gene92385:CDS |
| AAAAGCAGCTGCCCAAGAAA+TGG | 0.401381 | 5.1:+30708 | MS.gene92385:CDS |
| GGTTGTTCAATTTGGGCAGC+AGG | 0.401748 | 5.1:-27653 | None:intergenic |
| AACAATGAGGAAAAGCTCTC+TGG | 0.403357 | 5.1:+29621 | MS.gene92385:CDS |
| TTCGACATCACCCATTTCTT+GGG | 0.407089 | 5.1:-30719 | None:intergenic |
| TAACATTGAGCTTTCAATAG+AGG | 0.407824 | 5.1:+29170 | MS.gene92385:CDS |
| TGTTGATGTTGATGTTGATC+TGG | 0.411221 | 5.1:+27934 | MS.gene92385:CDS |
| AAGATAAATAATGTCGTCTC+TGG | 0.411416 | 5.1:+29330 | MS.gene92385:CDS |
| TTTAGCCTCACTAGCTATTC+GGG | 0.411756 | 5.1:-30488 | None:intergenic |
| GAAGCTGATGCAGCTGCTGC+AGG | 0.415904 | 5.1:-27722 | None:intergenic |
| TCAACCATTGAGGTGAAGTA+TGG | 0.417837 | 5.1:+29369 | MS.gene92385:CDS |
| AGGCACCCTTGATAAATTGC+AGG | 0.418273 | 5.1:+30594 | MS.gene92385:CDS |
| AGTACTAACGACGAAGGAAT+CGG | 0.425231 | 5.1:-28002 | None:intergenic |
| AAAGAATGGGAGCAAAACTT+AGG | 0.430881 | 5.1:+29484 | MS.gene92385:CDS |
| TACTATCACTAGATGGTTGT+TGG | 0.432236 | 5.1:-28030 | None:intergenic |
| AGGAGGAAGCTAAAGGATAC+AGG | 0.435555 | 5.1:+29526 | MS.gene92385:CDS |
| TAAAAGAAAGAGTGTGCTAA+TGG | 0.437544 | 5.1:+29221 | MS.gene92385:CDS |
| ATCAGCTTGTCTCAATGATT+CGG | 0.437966 | 5.1:-28419 | None:intergenic |
| CAGTCTCCTGCAATTTATCA+AGG | 0.444642 | 5.1:-30600 | None:intergenic |
| CAAAACTTAGGGAATTTGCT+AGG | 0.448557 | 5.1:+29496 | MS.gene92385:CDS |
| ATTAACCTGCAAGGAAGCTC+TGG | 0.449548 | 5.1:-29679 | None:intergenic |
| GGATTCACTGTTTGAAGGGA+TGG | 0.449967 | 5.1:+27619 | MS.gene92385:CDS |
| CTCTGCATCTTCTGCTCGAA+AGG | 0.452472 | 5.1:+28228 | MS.gene92385:CDS |
| TGATTCTTCTCCTCCTCCGC+TGG | 0.452831 | 5.1:-27674 | None:intergenic |
| GCTGATGCAGCTGCTGCAGG+AGG | 0.453854 | 5.1:-27719 | None:intergenic |
| TCTCGTTCAGGAAGAAAGAA+TGG | 0.469047 | 5.1:+29470 | MS.gene92385:CDS |
| TCGATCAACATACAATTTCA+AGG | 0.470108 | 5.1:+30798 | MS.gene92385:CDS |
| CGAAACTCTGTCACTGAAGA+AGG | 0.470630 | 5.1:+29431 | MS.gene92385:CDS |
| TCTTGCTTCTCTTAAATACA+TGG | 0.470663 | 5.1:+28291 | MS.gene92385:CDS |
| ATGTCATCTATACTGAAGTC+CGG | 0.471801 | 5.1:+29576 | MS.gene92385:CDS |
| TCCTTCTCCTTCTCCTTCGC+CGG | 0.472966 | 5.1:+27964 | MS.gene92385:CDS |
| TACTGCTGCAAGGAATTTCA+AGG | 0.474319 | 5.1:+30459 | MS.gene92385:CDS |
| TCTGGCTTGAGGATAGGTTA+TGG | 0.475732 | 5.1:+27887 | MS.gene92385:CDS |
| ACGAAGGAATCGGGAATATG+AGG | 0.480087 | 5.1:-27992 | None:intergenic |
| TTTGCCATACTTCACCTCAA+TGG | 0.480113 | 5.1:-29373 | None:intergenic |
| GTACTAACGACGAAGGAATC+GGG | 0.483555 | 5.1:-28001 | None:intergenic |
| ATCAATGGAGGTGGTGGTGG+TGG | 0.484371 | 5.1:-28068 | None:intergenic |
| TCACTAGTACTATCACTAGA+TGG | 0.489482 | 5.1:-28037 | None:intergenic |
| AAAGCAGCTGCCCAAGAAAT+GGG | 0.490454 | 5.1:+30709 | MS.gene92385:CDS |
| CAGCCTCAGCTTCTGCAAGC+AGG | 0.491844 | 5.1:-30753 | None:intergenic |
| GCGGATCGACGACGAGGGTG+AGG | 0.494709 | 5.1:-27781 | None:intergenic |
| AGAAGTGAAATTGTTTCAGC+AGG | 0.495187 | 5.1:+29644 | MS.gene92385:CDS |
| AACATCAATGGAGGTGGTGG+TGG | 0.495643 | 5.1:-28071 | None:intergenic |
| CTGCTCGAAAGGATGCCATC+AGG | 0.495792 | 5.1:+28239 | MS.gene92385:CDS |
| ATATACTGACCGTTGCATAA+TGG | 0.498069 | 5.1:-28528 | None:intergenic |
| TGGCTGTATCCATTCCCATC+TGG | 0.500310 | 5.1:-30537 | None:intergenic |
| TGAGGGAATGATCTTATTGA+AGG | 0.505500 | 5.1:+30621 | MS.gene92385:CDS |
| AATTGAACAACCAGCGGAGG+AGG | 0.507192 | 5.1:+27664 | MS.gene92385:CDS |
| ACTATCACTAGATGGTTGTT+GGG | 0.511746 | 5.1:-28029 | None:intergenic |
| GGCCTTTCTTCTACTCCTGA+TGG | 0.515837 | 5.1:-28254 | None:intergenic |
| TGTCATCTATACTGAAGTCC+GGG | 0.516629 | 5.1:+29577 | MS.gene92385:CDS |
| GATATGGATTCACTGTTTGA+AGG | 0.517172 | 5.1:+27614 | MS.gene92385:CDS |
| AGAAACGTTCCAGAAAATAA+GGG | 0.517394 | 5.1:+28162 | MS.gene92385:CDS |
| TTCATCATCAGAAGCCTTGG+AGG | 0.517836 | 5.1:+29083 | MS.gene92385:CDS |
| AAGAATGGGAGCAAAACTTA+GGG | 0.522281 | 5.1:+29485 | MS.gene92385:CDS |
| GGAGGAGCCGGCGAAGGAGA+AGG | 0.524720 | 5.1:-27971 | None:intergenic |
| TGCCATCAGGAGTAGAAGAA+AGG | 0.526891 | 5.1:+28252 | MS.gene92385:CDS |
| TGTTGATGTTGATCTGGATG+TGG | 0.531937 | 5.1:+27940 | MS.gene92385:CDS |
| GTTGTTCAATTTGGGCAGCA+GGG | 0.533020 | 5.1:-27652 | None:intergenic |
| TTCGAATCTTGAAAAGCTTG+AGG | 0.533399 | 5.1:+30561 | MS.gene92385:CDS |
| ACACCTTTCTGCCGCTGAGA+AGG | 0.535473 | 5.1:+28381 | MS.gene92385:CDS |
| AGCAACATCAATGGAGGTGG+TGG | 0.537145 | 5.1:-28074 | None:intergenic |
| AAAACTTAGGGAATTTGCTA+GGG | 0.538995 | 5.1:+29497 | MS.gene92385:CDS |
| GGAATTTGCTAGGGTTTCTG+AGG | 0.541022 | 5.1:+29506 | MS.gene92385:CDS |
| TGTCCTTCTCAGCGGCAGAA+AGG | 0.542611 | 5.1:-28384 | None:intergenic |
| AAACGATCTGGCTTGAGGAT+AGG | 0.543009 | 5.1:+27881 | MS.gene92385:CDS |
| CTCGTTCAGGAAGAAAGAAT+GGG | 0.543231 | 5.1:+29471 | MS.gene92385:CDS |
| AAGTCTCAGTTTATCCTCCC+CGG | 0.543354 | 5.1:-29595 | None:intergenic |
| AGAGAATATCCAGATGGGAA+TGG | 0.545530 | 5.1:+30528 | MS.gene92385:CDS |
| ATTGAGATTGAAGAAGATCA+TGG | 0.546555 | 5.1:-27814 | None:intergenic |
| ATATGGATTCACTGTTTGAA+GGG | 0.547035 | 5.1:+27615 | MS.gene92385:CDS |
| AACAGCAGGAGCAACATCAA+TGG | 0.549336 | 5.1:-28083 | None:intergenic |
| TCGGGAATATGAGGAGGAGC+CGG | 0.553209 | 5.1:-27983 | None:intergenic |
| TTCTTTCTTCCTGAACGAGA+AGG | 0.555128 | 5.1:-29467 | None:intergenic |
| AGAGATTCAGTCAACCATTG+AGG | 0.558406 | 5.1:+29359 | MS.gene92385:CDS |
| CAGAGAAGGAGAAAACGATC+TGG | 0.560854 | 5.1:+27869 | MS.gene92385:CDS |
| GTTTCTGAGGAGGAAGCTAA+AGG | 0.564591 | 5.1:+29519 | MS.gene92385:CDS |
| TCTCAGCGGCAGAAAGGTGT+TGG | 0.569864 | 5.1:-28378 | None:intergenic |
| TGATAAATTGCAGGAGACTG+AGG | 0.570191 | 5.1:+30603 | MS.gene92385:CDS |
| AGAGAAGATATTCTCGTCAA+GGG | 0.574979 | 5.1:-27756 | None:intergenic |
| ATTTGCTAGGGTTTCTGAGG+AGG | 0.580411 | 5.1:+29509 | MS.gene92385:CDS |
| AGCAGCTATGTGAGAGTCGA+GGG | 0.583434 | 5.1:-28479 | None:intergenic |
| GCCGGCGAAGGAGAAGGAGA+AGG | 0.583638 | 5.1:-27965 | None:intergenic |
| ATTCAAAAGAAATGGAACAA+TGG | 0.589269 | 5.1:+29058 | MS.gene92385:CDS |
| CAGAGAAGATATTCTCGTCA+AGG | 0.589682 | 5.1:-27757 | None:intergenic |
| GGAGAAAACGATCTGGCTTG+AGG | 0.590628 | 5.1:+27876 | MS.gene92385:CDS |
| TGAGAAAGAGAATATCCAGA+TGG | 0.592249 | 5.1:+30522 | MS.gene92385:CDS |
| CGAATCTGAATGAACATGGA+AGG | 0.596912 | 5.1:+27584 | None:intergenic |
| GAGAGTTCCAGAACTTGAAG+CGG | 0.597506 | 5.1:+30423 | MS.gene92385:CDS |
| ATATGAGGAGGAGCCGGCGA+AGG | 0.598171 | 5.1:-27977 | None:intergenic |
| CGACTCTCACATAGCTGCTG+AGG | 0.598674 | 5.1:+28483 | MS.gene92385:CDS |
| AGTTGAGCAGTTGACGAGCA+TGG | 0.600096 | 5.1:-28207 | None:intergenic |
| TACTGACCGTTGCATAATGG+TGG | 0.601422 | 5.1:-28525 | None:intergenic |
| GGATCGAATCTGAATGAACA+TGG | 0.603041 | 5.1:+27580 | None:intergenic |
| GAGAAAGAGAATATCCAGAT+GGG | 0.606890 | 5.1:+30523 | MS.gene92385:CDS |
| AGGAGCAACATCAATGGAGG+TGG | 0.607030 | 5.1:-28077 | None:intergenic |
| GATAAATTGCAGGAGACTGA+GGG | 0.609466 | 5.1:+30604 | MS.gene92385:CDS |
| CTTCGCACCAACATCAGAGA+AGG | 0.609487 | 5.1:+27855 | MS.gene92385:CDS |
| AGCAAGATTAGAATTCTGAA+AGG | 0.612744 | 5.1:-28275 | None:intergenic |
| AGTCTCCTGCAATTTATCAA+GGG | 0.623518 | 5.1:-30599 | None:intergenic |
| AACATCAACATCAACATCAA+CGG | 0.624113 | 5.1:-27927 | None:intergenic |
| TCTCCTGCTTGCAGAAGCTG+AGG | 0.624719 | 5.1:+30750 | MS.gene92385:CDS |
| GTAGCGCTAACACTAACAGC+AGG | 0.633509 | 5.1:-28097 | None:intergenic |
| ACATAGCATCCTTCAAGCAG+AGG | 0.634177 | 5.1:+30383 | MS.gene92385:CDS |
| CAGCAGCTATGTGAGAGTCG+AGG | 0.634230 | 5.1:-28480 | None:intergenic |
| AGTACAAGAATTAACCTGCA+AGG | 0.635054 | 5.1:-29688 | None:intergenic |
| ATCTGAATGAACATGGAAGG+TGG | 0.639736 | 5.1:+27587 | None:intergenic |
| GTGTTGGCTAACCATTTCAG+CGG | 0.645187 | 5.1:-28362 | None:intergenic |
| GAAGGAGAAAGAGTTAGCAA+TGG | 0.653490 | 5.1:+30639 | MS.gene92385:CDS |
| TTGAAGCGGATCGACGACGA+GGG | 0.659046 | 5.1:-27786 | None:intergenic |
| AAGGAATCGGGAATATGAGG+AGG | 0.659914 | 5.1:-27989 | None:intergenic |
| TGAATGAACATGGAAGGTGG+CGG | 0.662329 | 5.1:+27590 | None:intergenic |
| TGCCCAAATTGAACAACCAG+CGG | 0.662559 | 5.1:+27658 | MS.gene92385:CDS |
| GAGAAGATATTCTCGTCAAG+GGG | 0.662637 | 5.1:-27755 | None:intergenic |
| GGAGGAAGCTAAAGGATACA+GGG | 0.664518 | 5.1:+29527 | MS.gene92385:CDS |
| AGCAGGAGCAACATCAATGG+AGG | 0.665368 | 5.1:-28080 | None:intergenic |
| GGCTGCCCGAATAGCTAGTG+AGG | 0.669487 | 5.1:+30483 | MS.gene92385:CDS |
| ACTGAGACTTACAAACAATG+AGG | 0.670889 | 5.1:+29608 | MS.gene92385:CDS |
| TTTGAAGCGGATCGACGACG+AGG | 0.674654 | 5.1:-27787 | None:intergenic |
| CCAAATTGAACAACCAGCGG+AGG | 0.674887 | 5.1:+27661 | MS.gene92385:CDS |
| GATTTGTTTGTCCTTCTCAG+CGG | 0.680058 | 5.1:-28392 | None:intergenic |
| GTCATCTATACTGAAGTCCG+GGG | 0.682251 | 5.1:+29578 | MS.gene92385:CDS |
| ATTACTCCACCATTATGCAA+CGG | 0.686615 | 5.1:+28519 | MS.gene92385:CDS |
| GGTAACAGTACTAACGACGA+AGG | 0.689403 | 5.1:-28008 | None:intergenic |
| ATCTATACTGAAGTCCGGGG+AGG | 0.704491 | 5.1:+29581 | MS.gene92385:CDS |
| ATCAACATCAACATCAACGG+TGG | 0.708121 | 5.1:-27924 | None:intergenic |
| ATCAACATACAATTTCAAGG+CGG | 0.735712 | 5.1:+30801 | MS.gene92385:CDS |
| TGCTGCAAGGAATTTCAAGG+AGG | 0.736309 | 5.1:+30462 | MS.gene92385:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATAGTAATAAATAAAAAT+AGG | - | chr5.1:30042-30061 | None:intergenic | 10.0% |
| !! | AAGGAATTTATTTATATCAT+TGG | - | chr5.1:28761-28780 | None:intergenic | 15.0% |
| !! | AGGAATTTATTTATATCATT+GGG | - | chr5.1:28760-28779 | None:intergenic | 15.0% |
| !! | AATTCTTGATAAAAAGCAAT+TGG | + | chr5.1:30873-30892 | MS.gene92385:CDS | 20.0% |
| !! | CAGATACAAAATTATACAAA+AGG | - | chr5.1:28912-28931 | None:intergenic | 20.0% |
| !! | TACAAAATTATACAAAAGGA+TGG | - | chr5.1:28908-28927 | None:intergenic | 20.0% |
| !! | TATTGTTAAAAACGTCTTAA+TGG | + | chr5.1:30208-30227 | MS.gene92385:intron | 20.0% |
| !!! | AATCTTATTTAATTGCTCTA+TGG | + | chr5.1:28853-28872 | MS.gene92385:intron | 20.0% |
| !!! | ATCTTATTTAATTGCTCTAT+GGG | + | chr5.1:28854-28873 | MS.gene92385:intron | 20.0% |
| !!! | TTTTATCAAGAATTGATACA+AGG | - | chr5.1:30867-30886 | None:intergenic | 20.0% |
| ! | ATAAAACAATGACCAAAAAG+TGG | + | chr5.1:30086-30105 | MS.gene92385:intron | 25.0% |
| ! | ATCATTGCATTCAAAAGAAA+TGG | + | chr5.1:29050-29069 | MS.gene92385:CDS | 25.0% |
| ! | ATTCAAAAGAAATGGAACAA+TGG | + | chr5.1:29058-29077 | MS.gene92385:CDS | 25.0% |
| ! | GTCAATATCTCTAGATATAA+TGG | + | chr5.1:29943-29962 | MS.gene92385:intron | 25.0% |
| !! | ATAATTTTGTATCTGTTTGC+TGG | + | chr5.1:28917-28936 | MS.gene92385:intron | 25.0% |
| !! | TCTTATTTAATTGCTCTATG+GGG | + | chr5.1:28855-28874 | MS.gene92385:intron | 25.0% |
| !!! | AATGTCATCACATTGTTTTT+AGG | + | chr5.1:30327-30346 | MS.gene92385:intron | 25.0% |
| !!! | TGTACTTATTTTTATGTGCT+TGG | + | chr5.1:29705-29724 | MS.gene92385:intron | 25.0% |
| !!! | TTTTAGTTCCTCTAAAAGAA+TGG | + | chr5.1:28723-28742 | MS.gene92385:intron | 25.0% |
| AACATCAACATCAACATCAA+CGG | - | chr5.1:27930-27949 | None:intergenic | 30.0% | |
| AAGAAACGTTCCAGAAAATA+AGG | + | chr5.1:28161-28180 | MS.gene92385:CDS | 30.0% | |
| AAGATAAATAATGTCGTCTC+TGG | + | chr5.1:29330-29349 | MS.gene92385:CDS | 30.0% | |
| AAGCAAAGCTAAAATGCATA+AGG | - | chr5.1:28780-28799 | None:intergenic | 30.0% | |
| AAGCTATGTTAGGTGAATAT+AGG | + | chr5.1:29811-29830 | MS.gene92385:intron | 30.0% | |
| AAGCTTGAGGAAGAAATTAA+AGG | + | chr5.1:30574-30593 | MS.gene92385:CDS | 30.0% | |
| AATAGAAGAAATGCAACCAT+GGG | - | chr5.1:30019-30038 | None:intergenic | 30.0% | |
| ACACTTATTCATTTCCTCAA+TGG | + | chr5.1:30120-30139 | MS.gene92385:intron | 30.0% | |
| AGAAACGTTCCAGAAAATAA+GGG | + | chr5.1:28162-28181 | MS.gene92385:CDS | 30.0% | |
| AGAGGAACTAAAATTACACT+TGG | - | chr5.1:28716-28735 | None:intergenic | 30.0% | |
| AGCAAGATTAGAATTCTGAA+AGG | - | chr5.1:28278-28297 | None:intergenic | 30.0% | |
| ATATGGATTCACTGTTTGAA+GGG | + | chr5.1:27615-27634 | MS.gene92385:CDS | 30.0% | |
| ATCAACATACAATTTCAAGG+CGG | + | chr5.1:30801-30820 | MS.gene92385:CDS | 30.0% | |
| ATTGAGATTGAAGAAGATCA+TGG | - | chr5.1:27817-27836 | None:intergenic | 30.0% | |
| CAAATTAAAGGTAGGAACTA+GGG | - | chr5.1:29774-29793 | None:intergenic | 30.0% | |
| CACTTATTCATTTCCTCAAT+GGG | + | chr5.1:30121-30140 | MS.gene92385:intron | 30.0% | |
| CGGAAGACATTTCAAATTTA+CGG | + | chr5.1:30821-30840 | MS.gene92385:CDS | 30.0% | |
| TAACATTGAGCTTTCAATAG+AGG | + | chr5.1:29170-29189 | MS.gene92385:CDS | 30.0% | |
| TCAAATTAAAGGTAGGAACT+AGG | - | chr5.1:29775-29794 | None:intergenic | 30.0% | |
| TCGATCAACATACAATTTCA+AGG | + | chr5.1:30798-30817 | MS.gene92385:CDS | 30.0% | |
| TCTTGCTTCTCTTAAATACA+TGG | + | chr5.1:28291-28310 | MS.gene92385:CDS | 30.0% | |
| TTGCATGGAAAAAAACAAAC+AGG | - | chr5.1:30282-30301 | None:intergenic | 30.0% | |
| ! | ACGGAAAGATTTGATTTCAA+TGG | + | chr5.1:30840-30859 | MS.gene92385:CDS | 30.0% |
| ! | ATTTACAGCATTCTAGAGAA+GGG | - | chr5.1:29001-29020 | None:intergenic | 30.0% |
| ! | TAAAAGAAAGAGTGTGCTAA+TGG | + | chr5.1:29221-29240 | MS.gene92385:CDS | 30.0% |
| ! | TAGGCTCTTTATTTAAGTCA+TGG | + | chr5.1:28950-28969 | MS.gene92385:intron | 30.0% |
| ! | TATTTACAGCATTCTAGAGA+AGG | - | chr5.1:29002-29021 | None:intergenic | 30.0% |
| ! | TGACAAAGGCATATACTAAT+TGG | - | chr5.1:28630-28649 | None:intergenic | 30.0% |
| ! | TTCCTCTGAAAGTAATAGTT+TGG | + | chr5.1:29921-29940 | MS.gene92385:intron | 30.0% |
| !! | AAAACTTAGGGAATTTGCTA+GGG | + | chr5.1:29497-29516 | MS.gene92385:CDS | 30.0% |
| !! | CAAATCTAAAGCATCGATAA+AGG | - | chr5.1:28446-28465 | None:intergenic | 30.0% |
| AAAGAATGGGAGCAAAACTT+AGG | + | chr5.1:29484-29503 | MS.gene92385:CDS | 35.0% | |
| AAGAATGGGAGCAAAACTTA+GGG | + | chr5.1:29485-29504 | MS.gene92385:CDS | 35.0% | |
| ACCTATGTAAAAACCCATTG+AGG | - | chr5.1:30137-30156 | None:intergenic | 35.0% | |
| ACTATCACTAGATGGTTGTT+GGG | - | chr5.1:28032-28051 | None:intergenic | 35.0% | |
| ACTGAGACTTACAAACAATG+AGG | + | chr5.1:29608-29627 | MS.gene92385:CDS | 35.0% | |
| AGAAGTGAAATTGTTTCAGC+AGG | + | chr5.1:29644-29663 | MS.gene92385:CDS | 35.0% | |
| AGAGAAGATATTCTCGTCAA+GGG | - | chr5.1:27759-27778 | None:intergenic | 35.0% | |
| AGCCTTGGAGGTTAAAAAAA+TGG | + | chr5.1:29095-29114 | MS.gene92385:CDS | 35.0% | |
| AGTACAAGAATTAACCTGCA+AGG | - | chr5.1:29691-29710 | None:intergenic | 35.0% | |
| AGTCTCCTGCAATTTATCAA+GGG | - | chr5.1:30602-30621 | None:intergenic | 35.0% | |
| ATATACTGACCGTTGCATAA+TGG | - | chr5.1:28531-28550 | None:intergenic | 35.0% | |
| ATCAACAAGTCTTCCAGTAA+TGG | - | chr5.1:28812-28831 | None:intergenic | 35.0% | |
| ATCAGCTTGTCTCAATGATT+CGG | - | chr5.1:28422-28441 | None:intergenic | 35.0% | |
| ATGTCATCTATACTGAAGTC+CGG | + | chr5.1:29576-29595 | MS.gene92385:CDS | 35.0% | |
| ATTACTCCACCATTATGCAA+CGG | + | chr5.1:28519-28538 | MS.gene92385:CDS | 35.0% | |
| ATTTAGCCTCACTAGCTATT+CGG | - | chr5.1:30492-30511 | None:intergenic | 35.0% | |
| GAAAATAATCCTCTGCTTGA+AGG | - | chr5.1:30395-30414 | None:intergenic | 35.0% | |
| GAATAGAAGAAATGCAACCA+TGG | - | chr5.1:30020-30039 | None:intergenic | 35.0% | |
| GACCAAACTATTACTTTCAG+AGG | - | chr5.1:29926-29945 | None:intergenic | 35.0% | |
| GAGAAAGAGAATATCCAGAT+GGG | + | chr5.1:30523-30542 | MS.gene92385:CDS | 35.0% | |
| GATATGGATTCACTGTTTGA+AGG | + | chr5.1:27614-27633 | MS.gene92385:CDS | 35.0% | |
| GGAGGTTAAAAAAATGGAGT+TGG | + | chr5.1:29101-29120 | MS.gene92385:CDS | 35.0% | |
| TACTATCACTAGATGGTTGT+TGG | - | chr5.1:28033-28052 | None:intergenic | 35.0% | |
| TCACTAGTACTATCACTAGA+TGG | - | chr5.1:28040-28059 | None:intergenic | 35.0% | |
| TGAGAAAGAGAATATCCAGA+TGG | + | chr5.1:30522-30541 | MS.gene92385:CDS | 35.0% | |
| TGAGGGAATGATCTTATTGA+AGG | + | chr5.1:30621-30640 | MS.gene92385:CDS | 35.0% | |
| TGGATGTCACGTCAAATTAA+AGG | - | chr5.1:29786-29805 | None:intergenic | 35.0% | |
| TGTCACGTCAAATTAAAGGT+AGG | - | chr5.1:29782-29801 | None:intergenic | 35.0% | |
| TGTTGATGTTGATGTTGATC+TGG | + | chr5.1:27934-27953 | MS.gene92385:CDS | 35.0% | |
| TTCGAATCTTGAAAAGCTTG+AGG | + | chr5.1:30561-30580 | MS.gene92385:CDS | 35.0% | |
| ! | AATGCACTCCATTCTTTTAG+AGG | - | chr5.1:28734-28753 | None:intergenic | 35.0% |
| ! | AATTGATAACCTTCTCGTTC+AGG | + | chr5.1:29458-29477 | MS.gene92385:CDS | 35.0% |
| ! | CAAAACTTAGGGAATTTGCT+AGG | + | chr5.1:29496-29515 | MS.gene92385:CDS | 35.0% |
| ! | CTTCACAAGCTTGTTCTAAT+TGG | - | chr5.1:28327-28346 | None:intergenic | 35.0% |
| ! | GCACACTCTTTCTTTTACAA+AGG | - | chr5.1:29218-29237 | None:intergenic | 35.0% |
| !! | AAGCTTTTCAAGATTCGAAG+TGG | - | chr5.1:30560-30579 | None:intergenic | 35.0% |
| !! | CAATGATGTTGCTTTCTTCA+TGG | - | chr5.1:29037-29056 | None:intergenic | 35.0% |
| !! | TCCTCAATGGGTTTTTACAT+AGG | + | chr5.1:30133-30152 | MS.gene92385:intron | 35.0% |
| !! | TTTGACATGTGTCCACTTTT+TGG | - | chr5.1:30101-30120 | None:intergenic | 35.0% |
| !!! | AGACAATTTTTTACCACCCA+TGG | + | chr5.1:30000-30019 | MS.gene92385:intron | 35.0% |
| !!! | AGATTTTGAAACCGCTGAAA+TGG | + | chr5.1:28351-28370 | MS.gene92385:CDS | 35.0% |
| !!! | CTCCATTTTTTTAACCTCCA+AGG | - | chr5.1:29100-29119 | None:intergenic | 35.0% |
| !!! | TTTTTTTCCGCTTCAAGTTC+TGG | - | chr5.1:30433-30452 | None:intergenic | 35.0% |
| AAAAAGTTGCTACTGCTGCA+AGG | + | chr5.1:30449-30468 | MS.gene92385:CDS | 40.0% | |
| AAAACTCCCAACACAAGTCA+AGG | + | chr5.1:29973-29992 | MS.gene92385:intron | 40.0% | |
| AACAATGAGGAAAAGCTCTC+TGG | + | chr5.1:29621-29640 | MS.gene92385:CDS | 40.0% | |
| AGAGAATATCCAGATGGGAA+TGG | + | chr5.1:30528-30547 | MS.gene92385:CDS | 40.0% | |
| AGAGATTCAGTCAACCATTG+AGG | + | chr5.1:29359-29378 | MS.gene92385:CDS | 40.0% | |
| AGTACTAACGACGAAGGAAT+CGG | - | chr5.1:28005-28024 | None:intergenic | 40.0% | |
| ATCAACATCAACATCAACGG+TGG | - | chr5.1:27927-27946 | None:intergenic | 40.0% | |
| ATCCAAGCTCAAGCTATGTT+AGG | + | chr5.1:29801-29820 | MS.gene92385:intron | 40.0% | |
| ATGTATGTCTACTCTAGCCT+TGG | + | chr5.1:28571-28590 | MS.gene92385:intron | 40.0% | |
| CAGAGAAGATATTCTCGTCA+AGG | - | chr5.1:27760-27779 | None:intergenic | 40.0% | |
| CAGTCTCCTGCAATTTATCA+AGG | - | chr5.1:30603-30622 | None:intergenic | 40.0% | |
| CTCGTTCAGGAAGAAAGAAT+GGG | + | chr5.1:29471-29490 | MS.gene92385:CDS | 40.0% | |
| CTTCTTCAGTGACAGAGTTT+CGG | - | chr5.1:29433-29452 | None:intergenic | 40.0% | |
| GAAGGAGAAAGAGTTAGCAA+TGG | + | chr5.1:30639-30658 | MS.gene92385:CDS | 40.0% | |
| GAGAAGATATTCTCGTCAAG+GGG | - | chr5.1:27758-27777 | None:intergenic | 40.0% | |
| GATAAATTGCAGGAGACTGA+GGG | + | chr5.1:30604-30623 | MS.gene92385:CDS | 40.0% | |
| GCTTCTCATAATGCCATTAC+TGG | + | chr5.1:28796-28815 | MS.gene92385:intron | 40.0% | |
| TACTGCTGCAAGGAATTTCA+AGG | + | chr5.1:30459-30478 | MS.gene92385:CDS | 40.0% | |
| TCAACCATTGAGGTGAAGTA+TGG | + | chr5.1:29369-29388 | MS.gene92385:CDS | 40.0% | |
| TCTCGTTCAGGAAGAAAGAA+TGG | + | chr5.1:29470-29489 | MS.gene92385:CDS | 40.0% | |
| TGATAAATTGCAGGAGACTG+AGG | + | chr5.1:30603-30622 | MS.gene92385:CDS | 40.0% | |
| TGTCATCTATACTGAAGTCC+GGG | + | chr5.1:29577-29596 | MS.gene92385:CDS | 40.0% | |
| TGTTGATGTTGATCTGGATG+TGG | + | chr5.1:27940-27959 | MS.gene92385:CDS | 40.0% | |
| TTCGACATCACCCATTTCTT+GGG | - | chr5.1:30722-30741 | None:intergenic | 40.0% | |
| TTCTTTCTTCCTGAACGAGA+AGG | - | chr5.1:29470-29489 | None:intergenic | 40.0% | |
| TTTAGCCTCACTAGCTATTC+GGG | - | chr5.1:30491-30510 | None:intergenic | 40.0% | |
| TTTGCCATACTTCACCTCAA+TGG | - | chr5.1:29376-29395 | None:intergenic | 40.0% | |
| ! | GAGTGTGCTAATGGATGAAT+TGG | + | chr5.1:29230-29249 | MS.gene92385:CDS | 40.0% |
| ! | GATTTGTTTGTCCTTCTCAG+CGG | - | chr5.1:28395-28414 | None:intergenic | 40.0% |
| ! | GTTTTCATCATCAGAAGCCT+TGG | + | chr5.1:29080-29099 | MS.gene92385:CDS | 40.0% |
| ! | GTTTTCTCCTTCTCTGATGT+TGG | - | chr5.1:27865-27884 | None:intergenic | 40.0% |
| ! | TGTATGTCTACTCTAGCCTT+GGG | + | chr5.1:28572-28591 | MS.gene92385:intron | 40.0% |
| !! | CTAGAGTCTGTGTTTTTGCA+TGG | - | chr5.1:30297-30316 | None:intergenic | 40.0% |
| !! | CTCATTCCTTGACTTGTGTT+GGG | - | chr5.1:29982-30001 | None:intergenic | 40.0% |
| !! | GTTTGCTGGCTTATTTCTCT+AGG | + | chr5.1:28931-28950 | MS.gene92385:intron | 40.0% |
| !! | TCTCATTCCTTGACTTGTGT+TGG | - | chr5.1:29983-30002 | None:intergenic | 40.0% |
| !!! | AGATCATGGTCGTTTTGAAG+CGG | - | chr5.1:27803-27822 | None:intergenic | 40.0% |
| !!! | GTATCGTCTCCCTTATTTTC+TGG | - | chr5.1:28174-28193 | None:intergenic | 40.0% |
| AAAAGCAGCTGCCCAAGAAA+TGG | + | chr5.1:30708-30727 | MS.gene92385:CDS | 45.0% | |
| AAAGCAGCTGCCCAAGAAAT+GGG | + | chr5.1:30709-30728 | MS.gene92385:CDS | 45.0% | |
| AACAGCAGGAGCAACATCAA+TGG | - | chr5.1:28086-28105 | None:intergenic | 45.0% | |
| AAGGAATCGGGAATATGAGG+AGG | - | chr5.1:27992-28011 | None:intergenic | 45.0% | |
| AAGTCTCAGTTTATCCTCCC+CGG | - | chr5.1:29598-29617 | None:intergenic | 45.0% | |
| ACATAGCATCCTTCAAGCAG+AGG | + | chr5.1:30383-30402 | MS.gene92385:CDS | 45.0% | |
| ACGAAGGAATCGGGAATATG+AGG | - | chr5.1:27995-28014 | None:intergenic | 45.0% | |
| AGAAGAAATGCAACCATGGG+TGG | - | chr5.1:30016-30035 | None:intergenic | 45.0% | |
| AGGAGGAAGCTAAAGGATAC+AGG | + | chr5.1:29526-29545 | MS.gene92385:CDS | 45.0% | |
| AGGCACCCTTGATAAATTGC+AGG | + | chr5.1:30594-30613 | MS.gene92385:CDS | 45.0% | |
| ATTAACCTGCAAGGAAGCTC+TGG | - | chr5.1:29682-29701 | None:intergenic | 45.0% | |
| CACCTAACATAGCTTGAGCT+TGG | - | chr5.1:29806-29825 | None:intergenic | 45.0% | |
| CAGAGAAGGAGAAAACGATC+TGG | + | chr5.1:27869-27888 | MS.gene92385:CDS | 45.0% | |
| CGAAACTCTGTCACTGAAGA+AGG | + | chr5.1:29431-29450 | MS.gene92385:CDS | 45.0% | |
| CTTCGACATCACCCATTTCT+TGG | - | chr5.1:30723-30742 | None:intergenic | 45.0% | |
| GAGAGTTCCAGAACTTGAAG+CGG | + | chr5.1:30423-30442 | MS.gene92385:CDS | 45.0% | |
| GGAGGAAGCTAAAGGATACA+GGG | + | chr5.1:29527-29546 | MS.gene92385:CDS | 45.0% | |
| GGATTCACTGTTTGAAGGGA+TGG | + | chr5.1:27619-27638 | MS.gene92385:CDS | 45.0% | |
| GGTAACAGTACTAACGACGA+AGG | - | chr5.1:28011-28030 | None:intergenic | 45.0% | |
| GTACTAACGACGAAGGAATC+GGG | - | chr5.1:28004-28023 | None:intergenic | 45.0% | |
| GTCATCTATACTGAAGTCCG+GGG | + | chr5.1:29578-29597 | MS.gene92385:CDS | 45.0% | |
| GTTGTTCAATTTGGGCAGCA+GGG | - | chr5.1:27655-27674 | None:intergenic | 45.0% | |
| TACTGACCGTTGCATAATGG+TGG | - | chr5.1:28528-28547 | None:intergenic | 45.0% | |
| TGAAGGATGCTATGTCTTGC+TGG | - | chr5.1:30378-30397 | None:intergenic | 45.0% | |
| TGCCATCAGGAGTAGAAGAA+AGG | + | chr5.1:28252-28271 | MS.gene92385:CDS | 45.0% | |
| TGCCCAAATTGAACAACCAG+CGG | + | chr5.1:27658-27677 | MS.gene92385:CDS | 45.0% | |
| TGCTGCAAGGAATTTCAAGG+AGG | + | chr5.1:30462-30481 | MS.gene92385:CDS | 45.0% | |
| TTCATCATCAGAAGCCTTGG+AGG | + | chr5.1:29083-29102 | MS.gene92385:CDS | 45.0% | |
| ! | AAACGATCTGGCTTGAGGAT+AGG | + | chr5.1:27881-27900 | MS.gene92385:CDS | 45.0% |
| ! | ATTTGCTAGGGTTTCTGAGG+AGG | + | chr5.1:29509-29528 | MS.gene92385:CDS | 45.0% |
| ! | CTCCGCTGGTTGTTCAATTT+GGG | - | chr5.1:27663-27682 | None:intergenic | 45.0% |
| ! | GTTTCTGAGGAGGAAGCTAA+AGG | + | chr5.1:29519-29538 | MS.gene92385:CDS | 45.0% |
| ! | TCTGGCTTGAGGATAGGTTA+TGG | + | chr5.1:27887-27906 | MS.gene92385:CDS | 45.0% |
| !! | GGAATTTGCTAGGGTTTCTG+AGG | + | chr5.1:29506-29525 | MS.gene92385:CDS | 45.0% |
| !! | GTGTTGGCTAACCATTTCAG+CGG | - | chr5.1:28365-28384 | None:intergenic | 45.0% |
| AATTGAACAACCAGCGGAGG+AGG | + | chr5.1:27664-27683 | MS.gene92385:CDS | 50.0% | |
| AGCAACATCAATGGAGGTGG+TGG | - | chr5.1:28077-28096 | None:intergenic | 50.0% | |
| AGCAGCTATGTGAGAGTCGA+GGG | - | chr5.1:28482-28501 | None:intergenic | 50.0% | |
| AGCAGGAGCAACATCAATGG+AGG | - | chr5.1:28083-28102 | None:intergenic | 50.0% | |
| AGGAGCAACATCAATGGAGG+TGG | - | chr5.1:28080-28099 | None:intergenic | 50.0% | |
| AGTTGAGCAGTTGACGAGCA+TGG | - | chr5.1:28210-28229 | None:intergenic | 50.0% | |
| ATCTATACTGAAGTCCGGGG+AGG | + | chr5.1:29581-29600 | MS.gene92385:CDS | 50.0% | |
| CCAAATTGAACAACCAGCGG+AGG | + | chr5.1:27661-27680 | MS.gene92385:CDS | 50.0% | |
| CTCTGCATCTTCTGCTCGAA+AGG | + | chr5.1:28228-28247 | MS.gene92385:CDS | 50.0% | |
| CTTCGCACCAACATCAGAGA+AGG | + | chr5.1:27855-27874 | MS.gene92385:CDS | 50.0% | |
| GGCCTTTCTTCTACTCCTGA+TGG | - | chr5.1:28257-28276 | None:intergenic | 50.0% | |
| GGTTGTTCAATTTGGGCAGC+AGG | - | chr5.1:27656-27675 | None:intergenic | 50.0% | |
| GTAGCGCTAACACTAACAGC+AGG | - | chr5.1:28100-28119 | None:intergenic | 50.0% | |
| TCCAGACCTGTGCTTAAGCA+CGG | + | chr5.1:30168-30187 | MS.gene92385:intron | 50.0% | |
| TGGCTGTATCCATTCCCATC+TGG | - | chr5.1:30540-30559 | None:intergenic | 50.0% | |
| ! | AACATCAATGGAGGTGGTGG+TGG | - | chr5.1:28074-28093 | None:intergenic | 50.0% |
| ! | CCTCCGCTGGTTGTTCAATT+TGG | - | chr5.1:27664-27683 | None:intergenic | 50.0% |
| ! | GGAGAAAACGATCTGGCTTG+AGG | + | chr5.1:27876-27895 | MS.gene92385:CDS | 50.0% |
| !! | TACTCTAGCCTTGGGTGTGA+GGG | + | chr5.1:28580-28599 | MS.gene92385:intron | 50.0% |
| ACACCTTTCTGCCGCTGAGA+AGG | + | chr5.1:28381-28400 | MS.gene92385:CDS | 55.0% | |
| AGTAGACACCCTCACACCCA+AGG | - | chr5.1:28591-28610 | None:intergenic | 55.0% | |
| CAGCAGCTATGTGAGAGTCG+AGG | - | chr5.1:28483-28502 | None:intergenic | 55.0% | |
| CCAGACCTGTGCTTAAGCAC+GGG | + | chr5.1:30169-30188 | MS.gene92385:intron | 55.0% | |
| CCGAGTGTCACAGTGCAACA+CGG | + | chr5.1:28653-28672 | MS.gene92385:intron | 55.0% | |
| CCGTGTTGCACTGTGACACT+CGG | - | chr5.1:28656-28675 | None:intergenic | 55.0% | |
| CGACTCTCACATAGCTGCTG+AGG | + | chr5.1:28483-28502 | MS.gene92385:CDS | 55.0% | |
| CGTGTTGCACTGTGACACTC+GGG | - | chr5.1:28655-28674 | None:intergenic | 55.0% | |
| CTGCTCGAAAGGATGCCATC+AGG | + | chr5.1:28239-28258 | MS.gene92385:CDS | 55.0% | |
| GTGACACTCGGGGATGACAA+AGG | - | chr5.1:28644-28663 | None:intergenic | 55.0% | |
| GTGTCACAGTGCAACACGGT+AGG | + | chr5.1:28657-28676 | MS.gene92385:intron | 55.0% | |
| GTGTTGCACTGTGACACTCG+GGG | - | chr5.1:28654-28673 | None:intergenic | 55.0% | |
| GTTCACCCGTGCTTAAGCAC+AGG | - | chr5.1:30177-30196 | None:intergenic | 55.0% | |
| TCCTTCTCCTTCTCCTTCGC+CGG | + | chr5.1:27964-27983 | MS.gene92385:CDS | 55.0% | |
| TCGGGAATATGAGGAGGAGC+CGG | - | chr5.1:27986-28005 | None:intergenic | 55.0% | |
| TCTCCTGCTTGCAGAAGCTG+AGG | + | chr5.1:30750-30769 | MS.gene92385:CDS | 55.0% | |
| TGATTCTTCTCCTCCTCCGC+TGG | - | chr5.1:27677-27696 | None:intergenic | 55.0% | |
| TGTCCTTCTCAGCGGCAGAA+AGG | - | chr5.1:28387-28406 | None:intergenic | 55.0% | |
| TTGAAGCGGATCGACGACGA+GGG | - | chr5.1:27789-27808 | None:intergenic | 55.0% | |
| ! | TCTCAGCGGCAGAAAGGTGT+TGG | - | chr5.1:28381-28400 | None:intergenic | 55.0% |
| ! | TTTGAAGCGGATCGACGACG+AGG | - | chr5.1:27790-27809 | None:intergenic | 55.0% |
| !! | ATCAATGGAGGTGGTGGTGG+TGG | - | chr5.1:28071-28090 | None:intergenic | 55.0% |
| !! | CATGGAAGGTGGCGGAGATA+TGG | + | chr5.1:27598-27617 | MS.gene92385:CDS | 55.0% |
| !! | CTACTCTAGCCTTGGGTGTG+AGG | + | chr5.1:28579-28598 | MS.gene92385:intron | 55.0% |
| !! | GGTGTGAGGGTGTCTACTCT+AGG | + | chr5.1:28593-28612 | MS.gene92385:intron | 55.0% |
| ATATGAGGAGGAGCCGGCGA+AGG | - | chr5.1:27980-27999 | None:intergenic | 60.0% | |
| CAGCCTCAGCTTCTGCAAGC+AGG | - | chr5.1:30756-30775 | None:intergenic | 60.0% | |
| CCCGTGCTTAAGCACAGGTC+TGG | - | chr5.1:30172-30191 | None:intergenic | 60.0% | |
| GAAGCTGATGCAGCTGCTGC+AGG | - | chr5.1:27725-27744 | None:intergenic | 60.0% | |
| GGCTGCCCGAATAGCTAGTG+AGG | + | chr5.1:30483-30502 | MS.gene92385:CDS | 60.0% | |
| TGCTGCCAGAGCTTCCTTGC+AGG | + | chr5.1:29674-29693 | MS.gene92385:CDS | 60.0% | |
| GCCGGCGAAGGAGAAGGAGA+AGG | - | chr5.1:27968-27987 | None:intergenic | 65.0% | |
| GCTGATGCAGCTGCTGCAGG+AGG | - | chr5.1:27722-27741 | None:intergenic | 65.0% | |
| GCGGATCGACGACGAGGGTG+AGG | - | chr5.1:27784-27803 | None:intergenic | 70.0% | |
| GGAGGAGCCGGCGAAGGAGA+AGG | - | chr5.1:27974-27993 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 27593 | 30924 | 27593 | ID=MS.gene92385 |
| chr5.1 | mRNA | 27593 | 30924 | 27593 | ID=MS.gene92385.t1;Parent=MS.gene92385 |
| chr5.1 | exon | 27593 | 28540 | 27593 | ID=MS.gene92385.t1.exon1;Parent=MS.gene92385.t1 |
| chr5.1 | CDS | 27593 | 28540 | 27593 | ID=cds.MS.gene92385.t1;Parent=MS.gene92385.t1 |
| chr5.1 | exon | 29009 | 29695 | 29009 | ID=MS.gene92385.t1.exon2;Parent=MS.gene92385.t1 |
| chr5.1 | CDS | 29009 | 29695 | 29009 | ID=cds.MS.gene92385.t1;Parent=MS.gene92385.t1 |
| chr5.1 | exon | 30349 | 30924 | 30349 | ID=MS.gene92385.t1.exon3;Parent=MS.gene92385.t1 |
| chr5.1 | CDS | 30349 | 30924 | 30349 | ID=cds.MS.gene92385.t1;Parent=MS.gene92385.t1 |
| Gene Sequence |
| Protein sequence |
