Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92949.t1 | XP_003592563.1 | 92.1 | 214 | 17 | 0 | 1 | 214 | 15 | 228 | 2.10E-108 | 401.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92949.t1 | Q9FKK2 | 51.7 | 174 | 77 | 3 | 1 | 167 | 13 | 186 | 3.9e-39 | 162.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92949.t1 | G7IAU3 | 92.1 | 214 | 17 | 0 | 1 | 214 | 15 | 228 | 1.5e-108 | 401.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene92949.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92949 | MS.gene22094 | PPI |
| MS.gene92949 | MS.gene068836 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92949.t1 | MTR_1g108580 | 92.056 | 214 | 17 | 0 | 1 | 214 | 15 | 228 | 1.81e-148 | 412 |
| MS.gene92949.t1 | MTR_1g108510 | 86.916 | 214 | 28 | 0 | 1 | 214 | 15 | 228 | 6.54e-144 | 400 |
| MS.gene92949.t1 | MTR_2g093190 | 87.383 | 214 | 27 | 0 | 1 | 214 | 15 | 228 | 3.95e-143 | 398 |
| MS.gene92949.t1 | MTR_3g030770 | 85.981 | 214 | 30 | 0 | 1 | 214 | 15 | 228 | 3.58e-141 | 394 |
| MS.gene92949.t1 | MTR_1g105920 | 75.743 | 202 | 41 | 1 | 1 | 194 | 15 | 216 | 8.28e-109 | 312 |
| MS.gene92949.t1 | MTR_8g043650 | 74.519 | 208 | 43 | 2 | 1 | 200 | 15 | 220 | 6.70e-108 | 310 |
| MS.gene92949.t1 | MTR_2g030740 | 73.762 | 202 | 45 | 1 | 1 | 194 | 15 | 216 | 2.99e-106 | 305 |
| MS.gene92949.t1 | MTR_1g105910 | 70.136 | 221 | 48 | 3 | 1 | 213 | 15 | 225 | 2.40e-105 | 303 |
| MS.gene92949.t1 | MTR_1g012570 | 71.782 | 202 | 49 | 1 | 1 | 194 | 15 | 216 | 4.44e-103 | 297 |
| MS.gene92949.t1 | MTR_3g052920 | 70.792 | 202 | 51 | 1 | 1 | 194 | 15 | 216 | 6.61e-100 | 289 |
| MS.gene92949.t1 | MTR_0121s0080 | 66.516 | 221 | 56 | 3 | 1 | 213 | 15 | 225 | 9.26e-99 | 286 |
| MS.gene92949.t1 | MTR_1g105905 | 65.138 | 218 | 58 | 3 | 4 | 213 | 1 | 208 | 1.77e-95 | 278 |
| MS.gene92949.t1 | MTR_1g075600 | 62.443 | 221 | 65 | 3 | 1 | 213 | 15 | 225 | 5.07e-91 | 267 |
| MS.gene92949.t1 | MTR_5g045560 | 64.593 | 209 | 64 | 2 | 1 | 201 | 15 | 221 | 1.86e-90 | 265 |
| MS.gene92949.t1 | MTR_1g077360 | 61.086 | 221 | 68 | 3 | 1 | 213 | 15 | 225 | 2.20e-90 | 265 |
| MS.gene92949.t1 | MTR_7g062350 | 63.208 | 212 | 60 | 3 | 10 | 213 | 36 | 237 | 1.15e-86 | 256 |
| MS.gene92949.t1 | MTR_2g085250 | 60.563 | 213 | 74 | 2 | 1 | 205 | 15 | 225 | 4.12e-85 | 252 |
| MS.gene92949.t1 | MTR_2g085280 | 59.276 | 221 | 72 | 3 | 1 | 213 | 15 | 225 | 8.96e-85 | 251 |
| MS.gene92949.t1 | MTR_5g053390 | 59.276 | 221 | 72 | 3 | 1 | 213 | 15 | 225 | 1.99e-84 | 250 |
| MS.gene92949.t1 | MTR_3g052870 | 65.347 | 202 | 43 | 4 | 1 | 194 | 15 | 197 | 1.28e-83 | 248 |
| MS.gene92949.t1 | MTR_5g055100 | 57.466 | 221 | 76 | 3 | 1 | 213 | 15 | 225 | 7.56e-83 | 246 |
| MS.gene92949.t1 | MTR_1g106070 | 71.429 | 168 | 40 | 1 | 1 | 160 | 15 | 182 | 2.61e-81 | 240 |
| MS.gene92949.t1 | MTR_0121s0100 | 83.051 | 118 | 20 | 0 | 1 | 118 | 15 | 132 | 4.16e-66 | 200 |
| MS.gene92949.t1 | MTR_1g075570 | 58.427 | 178 | 52 | 2 | 4 | 173 | 1 | 164 | 1.79e-57 | 179 |
| MS.gene92949.t1 | MTR_3g080940 | 52.663 | 169 | 78 | 2 | 1 | 169 | 15 | 181 | 6.59e-57 | 179 |
| MS.gene92949.t1 | MTR_3g030780 | 69.492 | 118 | 36 | 0 | 1 | 118 | 15 | 132 | 7.48e-53 | 166 |
| MS.gene92949.t1 | MTR_3g067910 | 63.107 | 103 | 38 | 0 | 7 | 109 | 2 | 104 | 1.36e-40 | 134 |
| MS.gene92949.t1 | MTR_8g086290 | 40.523 | 153 | 81 | 2 | 1 | 150 | 18 | 163 | 2.61e-32 | 115 |
| MS.gene92949.t1 | MTR_7g028448 | 40.523 | 153 | 79 | 3 | 8 | 160 | 25 | 165 | 6.91e-31 | 111 |
| MS.gene92949.t1 | MTR_4g036915 | 40.523 | 153 | 79 | 3 | 8 | 160 | 25 | 165 | 6.91e-31 | 111 |
| MS.gene92949.t1 | MTR_1g108500 | 61.856 | 97 | 16 | 1 | 8 | 104 | 110 | 185 | 1.21e-29 | 112 |
| MS.gene92949.t1 | MTR_2g105290 | 37.086 | 151 | 91 | 1 | 1 | 151 | 18 | 164 | 5.42e-29 | 107 |
| MS.gene92949.t1 | MTR_3g067875 | 75.000 | 56 | 14 | 0 | 4 | 59 | 1 | 56 | 9.17e-24 | 90.1 |
| MS.gene92949.t1 | MTR_4g127140 | 35.484 | 155 | 86 | 3 | 8 | 152 | 25 | 175 | 1.75e-23 | 93.2 |
| MS.gene92949.t1 | MTR_8g033220 | 31.193 | 218 | 120 | 7 | 1 | 202 | 8 | 211 | 6.21e-22 | 90.1 |
| MS.gene92949.t1 | MTR_8g033220 | 31.193 | 218 | 120 | 7 | 1 | 202 | 8 | 211 | 7.00e-22 | 90.1 |
| MS.gene92949.t1 | MTR_3g067915 | 50.562 | 89 | 44 | 0 | 24 | 112 | 8 | 96 | 1.58e-21 | 85.5 |
| MS.gene92949.t1 | MTR_4g102530 | 59.677 | 62 | 25 | 0 | 1 | 62 | 8 | 69 | 4.42e-20 | 84.7 |
| MS.gene92949.t1 | MTR_1g063160 | 51.389 | 72 | 35 | 0 | 1 | 72 | 8 | 79 | 2.53e-19 | 82.0 |
| MS.gene92949.t1 | MTR_3g067870 | 56.757 | 74 | 26 | 1 | 2 | 75 | 83 | 150 | 3.74e-19 | 80.9 |
| MS.gene92949.t1 | MTR_7g075870 | 42.308 | 104 | 58 | 1 | 1 | 104 | 8 | 109 | 5.45e-19 | 82.0 |
| MS.gene92949.t1 | MTR_4g131030 | 42.000 | 100 | 43 | 2 | 11 | 95 | 18 | 117 | 7.97e-19 | 81.6 |
| MS.gene92949.t1 | MTR_1g054265 | 50.000 | 72 | 36 | 0 | 1 | 72 | 8 | 79 | 1.16e-18 | 80.1 |
| MS.gene92949.t1 | MTR_8g033270 | 35.256 | 156 | 83 | 4 | 1 | 146 | 8 | 155 | 1.31e-18 | 81.6 |
| MS.gene92949.t1 | MTR_5g066180 | 33.987 | 153 | 76 | 4 | 1 | 150 | 8 | 138 | 1.80e-18 | 80.9 |
| MS.gene92949.t1 | MTR_1g047550 | 58.065 | 62 | 26 | 0 | 11 | 72 | 18 | 79 | 2.15e-18 | 79.3 |
| MS.gene92949.t1 | MTR_8g079502 | 47.059 | 85 | 43 | 1 | 11 | 95 | 18 | 100 | 2.49e-18 | 79.3 |
| MS.gene92949.t1 | MTR_3g005530 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 4.71e-18 | 79.7 |
| MS.gene92949.t1 | MTR_7g075870 | 41.905 | 105 | 58 | 2 | 1 | 104 | 8 | 110 | 9.67e-18 | 78.6 |
| MS.gene92949.t1 | MTR_8g051580 | 64.151 | 53 | 19 | 0 | 11 | 63 | 18 | 70 | 1.11e-17 | 77.8 |
| MS.gene92949.t1 | MTR_4g093970 | 60.656 | 61 | 24 | 0 | 1 | 61 | 34 | 94 | 1.28e-17 | 78.6 |
| MS.gene92949.t1 | MTR_4g094632 | 39.175 | 97 | 57 | 1 | 4 | 100 | 11 | 105 | 1.29e-17 | 77.0 |
| MS.gene92949.t1 | MTR_8g046350 | 38.596 | 114 | 62 | 3 | 11 | 121 | 18 | 126 | 3.26e-17 | 75.9 |
| MS.gene92949.t1 | MTR_3g102570 | 45.833 | 96 | 49 | 3 | 1 | 95 | 8 | 101 | 4.11e-17 | 78.6 |
| MS.gene92949.t1 | MTR_2g009890 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 8.45e-17 | 77.0 |
| MS.gene92949.t1 | MTR_4g094638 | 39.000 | 100 | 60 | 1 | 1 | 99 | 8 | 107 | 1.25e-16 | 74.7 |
| MS.gene92949.t1 | MTR_1g101970 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 2.42e-16 | 74.3 |
| MS.gene92949.t1 | MTR_1g053070 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 2.59e-16 | 75.5 |
| MS.gene92949.t1 | MTR_3g452380 | 51.613 | 62 | 30 | 0 | 1 | 62 | 23 | 84 | 3.25e-16 | 75.1 |
| MS.gene92949.t1 | MTR_5g032520 | 27.854 | 219 | 135 | 6 | 1 | 199 | 8 | 223 | 4.44e-16 | 74.3 |
| MS.gene92949.t1 | MTR_8g087860 | 34.746 | 118 | 65 | 3 | 1 | 112 | 24 | 135 | 5.35e-16 | 74.3 |
| MS.gene92949.t1 | MTR_6g464720 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 6.18e-16 | 74.3 |
| MS.gene92949.t1 | MTR_5g032150 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 9.63e-16 | 73.6 |
| MS.gene92949.t1 | MTR_7g016600 | 53.968 | 63 | 28 | 1 | 1 | 62 | 8 | 70 | 1.05e-15 | 73.6 |
| MS.gene92949.t1 | MTR_5g031000 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 1.17e-15 | 73.6 |
| MS.gene92949.t1 | MTR_5g031000 | 48.387 | 62 | 32 | 0 | 1 | 62 | 8 | 69 | 1.19e-15 | 73.2 |
| MS.gene92949.t1 | MTR_4g084740 | 45.570 | 79 | 42 | 1 | 1 | 78 | 8 | 86 | 1.73e-15 | 74.3 |
| MS.gene92949.t1 | MTR_0003s0590 | 40.789 | 76 | 45 | 0 | 1 | 76 | 8 | 83 | 2.50e-15 | 72.8 |
| MS.gene92949.t1 | MTR_2g017865 | 50.000 | 62 | 31 | 0 | 1 | 62 | 23 | 84 | 2.91e-15 | 72.8 |
| MS.gene92949.t1 | MTR_7g075850 | 33.333 | 159 | 83 | 6 | 1 | 146 | 8 | 156 | 8.11e-15 | 71.2 |
| MS.gene92949.t1 | MTR_8g066260 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 1.40e-14 | 70.5 |
| MS.gene92949.t1 | MTR_5g046870 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 1.48e-14 | 67.8 |
| MS.gene92949.t1 | MTR_1g041615 | 39.048 | 105 | 55 | 2 | 6 | 109 | 17 | 113 | 1.65e-14 | 68.2 |
| MS.gene92949.t1 | MTR_4g109830 | 47.619 | 63 | 32 | 1 | 1 | 62 | 8 | 70 | 2.15e-14 | 69.7 |
| MS.gene92949.t1 | MTR_6g015975 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 2.16e-14 | 70.1 |
| MS.gene92949.t1 | MTR_2g461710 | 58.000 | 50 | 21 | 0 | 1 | 50 | 8 | 57 | 5.09e-14 | 64.7 |
| MS.gene92949.t1 | MTR_8g097090 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 5.51e-14 | 68.9 |
| MS.gene92949.t1 | MTR_3g084980 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 6.12e-14 | 68.9 |
| MS.gene92949.t1 | MTR_3g113030 | 31.325 | 166 | 88 | 6 | 1 | 159 | 8 | 154 | 6.80e-14 | 68.6 |
| MS.gene92949.t1 | MTR_8g022970 | 31.973 | 147 | 71 | 4 | 13 | 145 | 36 | 167 | 9.79e-14 | 67.4 |
| MS.gene92949.t1 | MTR_5g046790 | 40.741 | 81 | 42 | 2 | 1 | 75 | 8 | 88 | 1.84e-13 | 67.0 |
| MS.gene92949.t1 | MTR_3g109930 | 29.814 | 161 | 103 | 2 | 13 | 169 | 20 | 174 | 3.26e-13 | 65.5 |
| MS.gene92949.t1 | MTR_1g038300 | 46.875 | 64 | 32 | 1 | 1 | 62 | 8 | 71 | 4.22e-13 | 66.2 |
| MS.gene92949.t1 | MTR_4g109810 | 56.000 | 50 | 22 | 0 | 1 | 50 | 8 | 57 | 5.17e-13 | 66.2 |
| MS.gene92949.t1 | MTR_3g088615 | 45.312 | 64 | 33 | 1 | 1 | 62 | 8 | 71 | 8.25e-13 | 64.7 |
| MS.gene92949.t1 | MTR_5g066960 | 47.170 | 53 | 28 | 0 | 1 | 53 | 8 | 60 | 8.87e-13 | 61.2 |
| MS.gene92949.t1 | MTR_7g016630 | 44.444 | 63 | 34 | 1 | 1 | 62 | 8 | 70 | 1.01e-12 | 65.5 |
| MS.gene92949.t1 | MTR_4g036050 | 29.609 | 179 | 103 | 6 | 1 | 172 | 8 | 170 | 1.29e-12 | 64.3 |
| MS.gene92949.t1 | MTR_3g437790 | 31.210 | 157 | 89 | 5 | 12 | 159 | 30 | 176 | 3.52e-12 | 63.2 |
| MS.gene92949.t1 | MTR_4g036050 | 28.902 | 173 | 98 | 7 | 1 | 172 | 8 | 156 | 5.80e-12 | 62.4 |
| MS.gene92949.t1 | MTR_4g036050 | 30.000 | 170 | 102 | 7 | 1 | 159 | 8 | 171 | 1.11e-11 | 61.6 |
| MS.gene92949.t1 | MTR_5g021270 | 48.438 | 64 | 31 | 1 | 1 | 62 | 8 | 71 | 1.74e-11 | 62.0 |
| MS.gene92949.t1 | MTR_5g021270 | 48.438 | 64 | 31 | 1 | 1 | 62 | 8 | 71 | 1.79e-11 | 62.0 |
| MS.gene92949.t1 | MTR_4g108720 | 39.024 | 82 | 47 | 2 | 1 | 79 | 8 | 89 | 3.81e-11 | 62.0 |
| MS.gene92949.t1 | MTR_1g029670 | 40.625 | 64 | 36 | 1 | 1 | 62 | 8 | 71 | 6.41e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92949.t1 | AT5G60440 | 52.299 | 174 | 76 | 4 | 1 | 167 | 13 | 186 | 7.81e-51 | 167 |
| MS.gene92949.t1 | AT2G24840 | 48.125 | 160 | 72 | 4 | 1 | 154 | 69 | 223 | 3.33e-41 | 141 |
| MS.gene92949.t1 | AT1G01530 | 43.275 | 171 | 89 | 4 | 3 | 169 | 15 | 181 | 6.18e-36 | 127 |
| MS.gene92949.t1 | AT1G65360 | 38.824 | 170 | 97 | 3 | 3 | 167 | 15 | 182 | 1.73e-31 | 115 |
| MS.gene92949.t1 | AT4G36590 | 40.881 | 159 | 88 | 2 | 1 | 153 | 13 | 171 | 6.63e-31 | 114 |
| MS.gene92949.t1 | AT2G34440 | 37.324 | 142 | 87 | 2 | 1 | 142 | 8 | 147 | 4.89e-23 | 91.7 |
| MS.gene92949.t1 | AT2G45660 | 37.107 | 159 | 80 | 6 | 1 | 148 | 8 | 157 | 1.25e-21 | 87.4 |
| MS.gene92949.t1 | AT2G45660 | 36.538 | 156 | 81 | 6 | 1 | 146 | 8 | 155 | 1.44e-20 | 86.3 |
| MS.gene92949.t1 | AT3G66656 | 41.593 | 113 | 62 | 2 | 1 | 109 | 8 | 120 | 2.67e-20 | 84.7 |
| MS.gene92949.t1 | AT4G09960 | 41.739 | 115 | 61 | 3 | 1 | 112 | 8 | 119 | 6.90e-20 | 84.3 |
| MS.gene92949.t1 | AT4G09960 | 41.739 | 115 | 61 | 3 | 1 | 112 | 8 | 119 | 7.46e-20 | 84.7 |
| MS.gene92949.t1 | AT4G09960 | 41.739 | 115 | 61 | 3 | 1 | 112 | 18 | 129 | 8.05e-20 | 84.7 |
| MS.gene92949.t1 | AT3G04100 | 30.286 | 175 | 114 | 4 | 1 | 169 | 20 | 192 | 8.76e-20 | 84.0 |
| MS.gene92949.t1 | AT4G09960 | 41.739 | 115 | 61 | 3 | 1 | 112 | 9 | 120 | 8.88e-20 | 84.3 |
| MS.gene92949.t1 | AT4G09960 | 41.739 | 115 | 61 | 3 | 1 | 112 | 34 | 145 | 1.03e-19 | 84.7 |
| MS.gene92949.t1 | AT4G09960 | 41.739 | 115 | 61 | 3 | 1 | 112 | 103 | 214 | 2.38e-19 | 84.7 |
| MS.gene92949.t1 | AT4G22950 | 48.148 | 81 | 36 | 1 | 1 | 75 | 8 | 88 | 7.59e-19 | 80.5 |
| MS.gene92949.t1 | AT4G24540 | 37.324 | 142 | 72 | 4 | 1 | 142 | 8 | 132 | 8.01e-19 | 81.6 |
| MS.gene92949.t1 | AT1G72350 | 30.263 | 152 | 73 | 3 | 1 | 152 | 49 | 167 | 1.93e-18 | 80.9 |
| MS.gene92949.t1 | AT2G45650 | 56.452 | 62 | 27 | 0 | 1 | 62 | 8 | 69 | 3.35e-18 | 80.5 |
| MS.gene92949.t1 | AT4G22950 | 48.148 | 81 | 36 | 1 | 1 | 75 | 8 | 88 | 4.88e-18 | 79.7 |
| MS.gene92949.t1 | AT4G22950 | 48.148 | 81 | 36 | 1 | 1 | 75 | 8 | 88 | 4.88e-18 | 79.7 |
| MS.gene92949.t1 | AT3G57230 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 5.58e-18 | 77.4 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 7.39e-18 | 77.4 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 7.39e-18 | 77.4 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 7.39e-18 | 77.4 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 1.01e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 1.01e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 1.01e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 1.01e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 1.01e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 1.41e-17 | 75.5 |
| MS.gene92949.t1 | AT3G57230 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 2.12e-17 | 78.2 |
| MS.gene92949.t1 | AT3G57230 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 2.12e-17 | 78.2 |
| MS.gene92949.t1 | AT5G51870 | 54.839 | 62 | 28 | 0 | 1 | 62 | 8 | 69 | 2.77e-17 | 76.6 |
| MS.gene92949.t1 | AT2G22540 | 54.839 | 62 | 28 | 0 | 1 | 62 | 8 | 69 | 2.83e-17 | 77.8 |
| MS.gene92949.t1 | AT2G22540 | 54.839 | 62 | 28 | 0 | 1 | 62 | 8 | 69 | 2.83e-17 | 77.8 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 2.98e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 2.98e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 3.06e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 3.06e-17 | 77.0 |
| MS.gene92949.t1 | AT5G62165 | 53.226 | 62 | 29 | 0 | 1 | 62 | 8 | 69 | 3.06e-17 | 77.0 |
| MS.gene92949.t1 | AT5G51870 | 54.839 | 62 | 28 | 0 | 1 | 62 | 8 | 69 | 3.87e-17 | 77.0 |
| MS.gene92949.t1 | AT4G37940 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 4.10e-17 | 77.4 |
| MS.gene92949.t1 | AT4G37940 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 5.03e-17 | 76.6 |
| MS.gene92949.t1 | AT1G22130 | 38.393 | 112 | 67 | 2 | 1 | 111 | 8 | 118 | 5.51e-17 | 78.6 |
| MS.gene92949.t1 | AT5G51870 | 54.839 | 62 | 28 | 0 | 1 | 62 | 8 | 69 | 5.90e-17 | 76.6 |
| MS.gene92949.t1 | AT5G51870 | 54.839 | 62 | 28 | 0 | 1 | 62 | 31 | 92 | 7.15e-17 | 75.9 |
| MS.gene92949.t1 | AT5G51870 | 54.839 | 62 | 28 | 0 | 1 | 62 | 18 | 79 | 7.90e-17 | 76.6 |
| MS.gene92949.t1 | AT4G37940 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 8.47e-17 | 75.1 |
| MS.gene92949.t1 | AT4G11880 | 53.968 | 63 | 28 | 1 | 1 | 62 | 8 | 70 | 1.00e-16 | 75.1 |
| MS.gene92949.t1 | AT4G11880 | 53.968 | 63 | 28 | 1 | 1 | 62 | 8 | 70 | 1.00e-16 | 75.1 |
| MS.gene92949.t1 | AT4G18960 | 42.553 | 94 | 44 | 2 | 1 | 94 | 24 | 107 | 1.33e-16 | 76.3 |
| MS.gene92949.t1 | AT4G11880 | 53.968 | 63 | 28 | 1 | 1 | 62 | 8 | 70 | 1.38e-16 | 75.9 |
| MS.gene92949.t1 | AT4G11880 | 53.968 | 63 | 28 | 1 | 1 | 62 | 8 | 70 | 1.38e-16 | 75.9 |
| MS.gene92949.t1 | AT1G77980 | 39.286 | 112 | 66 | 2 | 1 | 111 | 8 | 118 | 2.27e-16 | 76.6 |
| MS.gene92949.t1 | AT5G10140 | 55.556 | 63 | 27 | 1 | 1 | 62 | 8 | 70 | 3.05e-16 | 73.6 |
| MS.gene92949.t1 | AT5G10140 | 55.556 | 63 | 27 | 1 | 1 | 62 | 8 | 70 | 4.15e-16 | 73.6 |
| MS.gene92949.t1 | AT3G57390 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 4.75e-16 | 74.3 |
| MS.gene92949.t1 | AT5G10140 | 55.556 | 63 | 27 | 1 | 1 | 62 | 8 | 70 | 5.04e-16 | 73.6 |
| MS.gene92949.t1 | AT5G10140 | 55.556 | 63 | 27 | 1 | 1 | 62 | 8 | 70 | 5.17e-16 | 73.6 |
| MS.gene92949.t1 | AT2G42830 | 50.000 | 62 | 31 | 0 | 1 | 62 | 23 | 84 | 6.90e-16 | 74.3 |
| MS.gene92949.t1 | AT2G42830 | 50.000 | 62 | 31 | 0 | 1 | 62 | 23 | 84 | 6.92e-16 | 74.3 |
| MS.gene92949.t1 | AT3G58780 | 50.000 | 62 | 31 | 0 | 1 | 62 | 23 | 84 | 1.04e-15 | 73.9 |
| MS.gene92949.t1 | AT3G30260 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 1.16e-15 | 73.6 |
| MS.gene92949.t1 | AT3G57390 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 1.21e-15 | 73.6 |
| MS.gene92949.t1 | AT3G58780 | 50.000 | 62 | 31 | 0 | 1 | 62 | 29 | 90 | 1.22e-15 | 73.6 |
| MS.gene92949.t1 | AT3G58780 | 50.000 | 62 | 31 | 0 | 1 | 62 | 23 | 84 | 1.75e-15 | 73.6 |
| MS.gene92949.t1 | AT5G15800 | 53.968 | 63 | 28 | 1 | 1 | 62 | 8 | 70 | 2.00e-15 | 73.2 |
| MS.gene92949.t1 | AT5G51860 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 2.05e-15 | 72.0 |
| MS.gene92949.t1 | AT5G51860 | 51.613 | 62 | 30 | 0 | 1 | 62 | 8 | 69 | 2.60e-15 | 72.0 |
| MS.gene92949.t1 | AT5G15800 | 53.968 | 63 | 28 | 1 | 1 | 62 | 8 | 70 | 3.42e-15 | 72.4 |
| MS.gene92949.t1 | AT5G13790 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 4.07e-15 | 72.4 |
| MS.gene92949.t1 | AT5G13790 | 50.000 | 62 | 31 | 0 | 1 | 62 | 8 | 69 | 4.35e-15 | 72.4 |
| MS.gene92949.t1 | AT1G69120 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 5.53e-15 | 71.6 |
| MS.gene92949.t1 | AT2G14210 | 46.032 | 63 | 33 | 1 | 1 | 62 | 8 | 70 | 6.57e-15 | 71.2 |
| MS.gene92949.t1 | AT1G28460 | 27.848 | 158 | 111 | 1 | 1 | 155 | 14 | 171 | 6.67e-15 | 70.5 |
| MS.gene92949.t1 | AT1G26310 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 7.10e-15 | 71.6 |
| MS.gene92949.t1 | AT2G14210 | 46.032 | 63 | 33 | 1 | 1 | 62 | 8 | 70 | 8.42e-15 | 71.2 |
| MS.gene92949.t1 | AT1G29962 | 27.950 | 161 | 110 | 2 | 1 | 155 | 14 | 174 | 9.72e-15 | 70.1 |
| MS.gene92949.t1 | AT3G02310 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 1.17e-14 | 70.1 |
| MS.gene92949.t1 | AT1G77950 | 42.857 | 77 | 43 | 1 | 1 | 76 | 8 | 84 | 1.32e-14 | 70.9 |
| MS.gene92949.t1 | AT1G77950 | 42.857 | 77 | 43 | 1 | 1 | 76 | 8 | 84 | 1.32e-14 | 70.9 |
| MS.gene92949.t1 | AT1G77950 | 42.857 | 77 | 43 | 1 | 1 | 76 | 8 | 84 | 1.32e-14 | 70.9 |
| MS.gene92949.t1 | AT1G77950 | 42.857 | 77 | 43 | 1 | 1 | 76 | 8 | 84 | 1.32e-14 | 70.9 |
| MS.gene92949.t1 | AT1G69120 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 1.38e-14 | 70.9 |
| MS.gene92949.t1 | AT5G60910 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 1.57e-14 | 70.5 |
| MS.gene92949.t1 | AT2G22540 | 51.613 | 62 | 25 | 1 | 1 | 62 | 8 | 64 | 2.27e-14 | 70.1 |
| MS.gene92949.t1 | AT5G65050 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 2.91e-14 | 68.6 |
| MS.gene92949.t1 | AT2G03710 | 50.000 | 64 | 30 | 1 | 1 | 62 | 8 | 71 | 2.91e-14 | 68.6 |
| MS.gene92949.t1 | AT3G02310 | 52.381 | 63 | 29 | 1 | 1 | 62 | 8 | 70 | 3.85e-14 | 69.7 |
| MS.gene92949.t1 | AT1G24260 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 4.81e-14 | 69.3 |
| MS.gene92949.t1 | AT1G24260 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 4.85e-14 | 69.3 |
| MS.gene92949.t1 | AT3G54340 | 33.871 | 124 | 68 | 5 | 1 | 111 | 8 | 130 | 4.90e-14 | 68.9 |
| MS.gene92949.t1 | AT1G24260 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 5.14e-14 | 68.9 |
| MS.gene92949.t1 | AT5G65050 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 6.46e-14 | 67.8 |
| MS.gene92949.t1 | AT5G65050 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 7.36e-14 | 67.8 |
| MS.gene92949.t1 | AT5G65050 | 50.794 | 63 | 30 | 1 | 1 | 62 | 8 | 70 | 7.75e-14 | 67.4 |
| MS.gene92949.t1 | AT2G03710 | 50.000 | 64 | 30 | 1 | 1 | 62 | 8 | 71 | 1.55e-13 | 67.8 |
| MS.gene92949.t1 | AT2G22630 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 1.60e-13 | 67.4 |
| MS.gene92949.t1 | AT2G22630 | 45.161 | 62 | 34 | 0 | 1 | 62 | 8 | 69 | 1.60e-13 | 67.4 |
| MS.gene92949.t1 | AT2G03710 | 50.000 | 64 | 30 | 1 | 1 | 62 | 8 | 71 | 1.63e-13 | 67.8 |
| MS.gene92949.t1 | AT1G71692 | 46.875 | 64 | 33 | 1 | 1 | 63 | 8 | 71 | 1.76e-13 | 67.0 |
| MS.gene92949.t1 | AT3G61120 | 46.774 | 62 | 33 | 0 | 1 | 62 | 8 | 69 | 1.79e-13 | 67.8 |
| MS.gene92949.t1 | AT5G65060 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 3.40e-13 | 65.9 |
| MS.gene92949.t1 | AT1G17310 | 50.847 | 59 | 27 | 1 | 11 | 69 | 64 | 120 | 3.95e-13 | 66.2 |
| MS.gene92949.t1 | AT3G58780 | 53.846 | 52 | 24 | 0 | 1 | 52 | 23 | 74 | 4.56e-13 | 66.2 |
| MS.gene92949.t1 | AT5G23260 | 43.902 | 82 | 40 | 2 | 1 | 76 | 24 | 105 | 4.79e-13 | 66.6 |
| MS.gene92949.t1 | AT5G23260 | 43.902 | 82 | 40 | 2 | 1 | 76 | 24 | 105 | 4.89e-13 | 66.6 |
| MS.gene92949.t1 | AT5G23260 | 43.902 | 82 | 40 | 2 | 1 | 76 | 8 | 89 | 4.96e-13 | 66.2 |
| MS.gene92949.t1 | AT5G65060 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 5.07e-13 | 65.5 |
| MS.gene92949.t1 | AT5G23260 | 43.902 | 82 | 40 | 2 | 1 | 76 | 8 | 89 | 5.17e-13 | 66.2 |
| MS.gene92949.t1 | AT1G17310 | 50.847 | 59 | 27 | 1 | 11 | 69 | 75 | 131 | 5.19e-13 | 66.2 |
| MS.gene92949.t1 | AT5G65060 | 49.206 | 63 | 31 | 1 | 1 | 62 | 8 | 70 | 5.85e-13 | 65.5 |
| MS.gene92949.t1 | AT3G58780 | 53.846 | 52 | 24 | 0 | 1 | 52 | 23 | 74 | 5.94e-13 | 66.6 |
| MS.gene92949.t1 | AT1G18750 | 42.254 | 71 | 39 | 1 | 1 | 69 | 8 | 78 | 7.89e-13 | 67.0 |
| MS.gene92949.t1 | AT1G18750 | 42.254 | 71 | 39 | 1 | 1 | 69 | 8 | 78 | 8.88e-13 | 66.6 |
| MS.gene92949.t1 | AT1G18750 | 42.254 | 71 | 39 | 1 | 1 | 69 | 8 | 78 | 9.15e-13 | 66.6 |
| MS.gene92949.t1 | AT5G65070 | 42.857 | 63 | 35 | 1 | 1 | 62 | 8 | 70 | 1.02e-12 | 63.5 |
| MS.gene92949.t1 | AT5G20240 | 44.776 | 67 | 35 | 1 | 1 | 65 | 8 | 74 | 1.50e-12 | 64.3 |
| MS.gene92949.t1 | AT5G65070 | 42.857 | 63 | 35 | 1 | 1 | 62 | 8 | 70 | 1.54e-12 | 64.3 |
| MS.gene92949.t1 | AT5G20240 | 44.776 | 67 | 35 | 1 | 1 | 65 | 8 | 74 | 1.63e-12 | 63.2 |
| MS.gene92949.t1 | AT5G65070 | 42.857 | 63 | 35 | 1 | 1 | 62 | 8 | 70 | 3.28e-12 | 63.9 |
| MS.gene92949.t1 | AT5G65070 | 42.857 | 63 | 35 | 1 | 1 | 62 | 8 | 70 | 3.47e-12 | 63.5 |
| MS.gene92949.t1 | AT1G28450 | 26.415 | 159 | 111 | 2 | 1 | 153 | 14 | 172 | 5.28e-12 | 62.4 |
Find 42 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCAGCTTGTTGAGGATT+TGG | 0.288922 | 1.2:-80672275 | None:intergenic |
| TTGCAGACTCATTTGTTTGA+TGG | 0.299389 | 1.2:+80672335 | MS.gene92949:CDS |
| GCAATTGCAACATAGGGTTT+TGG | 0.318308 | 1.2:-80672316 | None:intergenic |
| TGAAATATTCAAGAAGGCTT+TGG | 0.322746 | 1.2:+80672154 | MS.gene92949:CDS |
| ATTGCATGGTGCTGTCGTTT+TGG | 0.328236 | 1.2:-80671956 | None:intergenic |
| CTCATCTCCAATCTTCTTCT+CGG | 0.357404 | 1.2:-80672054 | None:intergenic |
| TGGTGGGCTTGTCCGGTTGA+TGG | 0.362109 | 1.2:+80672113 | MS.gene92949:CDS |
| CTTTCTCAAAGCGCCGTAAC+GGG | 0.409500 | 1.2:+80671790 | MS.gene92949:CDS |
| GTCTATGACCGTATCAAGAT+TGG | 0.432634 | 1.2:-80671910 | None:intergenic |
| CTGGATGCCGAGAAGAAGAT+TGG | 0.435713 | 1.2:+80672047 | MS.gene92949:CDS |
| AGTGAGCTTTGCACCCTTTG+TGG | 0.441727 | 1.2:+80671828 | MS.gene92949:CDS |
| AGGAAACCGAGGCTAAGTTT+TGG | 0.459813 | 1.2:+80672093 | MS.gene92949:CDS |
| TGAGTCTGCAATTGCAACAT+AGG | 0.462179 | 1.2:-80672323 | None:intergenic |
| GTTGAGGATTTGGCTGATGA+TGG | 0.468844 | 1.2:-80672265 | None:intergenic |
| AATATTCAAGAAGGCTTTGG+AGG | 0.481574 | 1.2:+80672157 | MS.gene92949:CDS |
| ATGATGGATATAAATGTTAG+AGG | 0.488505 | 1.2:-80672249 | None:intergenic |
| ACTTTCTCAAAGCGCCGTAA+CGG | 0.489334 | 1.2:+80671789 | MS.gene92949:CDS |
| AGCAGCATCTGCACCACAAA+GGG | 0.494828 | 1.2:-80671841 | None:intergenic |
| TCAACTTGAAATATTCAAGA+AGG | 0.504642 | 1.2:+80672148 | MS.gene92949:CDS |
| TCTCTATTCATACCATCAAC+CGG | 0.508999 | 1.2:-80672125 | None:intergenic |
| ACAAAGGGTGCAAAGCTCAC+TGG | 0.525840 | 1.2:-80671826 | None:intergenic |
| CTTTCTTAAAGAGCCCGTTA+CGG | 0.532996 | 1.2:-80671803 | None:intergenic |
| TGGTCACTCCAATCTTGATA+CGG | 0.539290 | 1.2:+80671902 | MS.gene92949:CDS |
| GAGTCTGCAATTGCAACATA+GGG | 0.542535 | 1.2:-80672322 | None:intergenic |
| GGAAACATTTCAGCTTGTTG+AGG | 0.562544 | 1.2:-80672281 | None:intergenic |
| ACACTATATTATTGAAACCA+TGG | 0.562826 | 1.2:-80672373 | None:intergenic |
| AGCCCACCAAAACTTAGCCT+CGG | 0.573174 | 1.2:-80672099 | None:intergenic |
| GGCTCGATTATTCCTCACCA+TGG | 0.575062 | 1.2:+80672356 | MS.gene92949:CDS |
| ATCAAGATTGGAGTGACCAA+AGG | 0.597538 | 1.2:-80671898 | None:intergenic |
| AGCATTGAGTTCACGAACGT+TGG | 0.603238 | 1.2:-80672000 | None:intergenic |
| CTAGTTGTATTCTCACCTAG+TGG | 0.605407 | 1.2:+80671864 | MS.gene92949:CDS |
| TGTATTCTCACCTAGTGGAA+AGG | 0.611194 | 1.2:+80671869 | MS.gene92949:CDS |
| GAGCAGCATCTGCACCACAA+AGG | 0.621182 | 1.2:-80671842 | None:intergenic |
| AAGGAAAATACCTTTCCACT+AGG | 0.624124 | 1.2:-80671879 | None:intergenic |
| GTTCACGAACGTTGGCATTG+CGG | 0.638735 | 1.2:-80671992 | None:intergenic |
| GTGAGCCTCAATGAATTGCA+TGG | 0.638934 | 1.2:-80671970 | None:intergenic |
| GACTCAAATCAACAACACAC+TGG | 0.641274 | 1.2:+80672028 | MS.gene92949:CDS |
| TGAGCTGAGCAATTTACGCA+AGG | 0.645129 | 1.2:+80672073 | MS.gene92949:CDS |
| CAATTTACGCAAGGAAACCG+AGG | 0.655078 | 1.2:+80672082 | MS.gene92949:CDS |
| CAGCACCATGCAATTCATTG+AGG | 0.658628 | 1.2:+80671965 | MS.gene92949:CDS |
| ATATTATTGAAACCATGGTG+AGG | 0.682934 | 1.2:-80672368 | None:intergenic |
| TTGGGATGAGAGAAAGATAG+CGG | 0.703250 | 1.2:-80671932 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACACTATATTATTGAAACCA+TGG | - | chr1.2:80672376-80672395 | None:intergenic | 25.0% |
| ! | TCAACTTGAAATATTCAAGA+AGG | + | chr1.2:80672148-80672167 | MS.gene92949:CDS | 25.0% |
| !!! | ATGATGGATATAAATGTTAG+AGG | - | chr1.2:80672252-80672271 | None:intergenic | 25.0% |
| ATATTATTGAAACCATGGTG+AGG | - | chr1.2:80672371-80672390 | None:intergenic | 30.0% | |
| TGAAATATTCAAGAAGGCTT+TGG | + | chr1.2:80672154-80672173 | MS.gene92949:CDS | 30.0% | |
| !!! | ATAGGGTTTTGGAAAATTTG+TGG | - | chr1.2:80672308-80672327 | None:intergenic | 30.0% |
| !!! | CAAACTCTTCCATTTTTTGT+TGG | + | chr1.2:80672215-80672234 | MS.gene92949:CDS | 30.0% |
| AAGGAAAATACCTTTCCACT+AGG | - | chr1.2:80671882-80671901 | None:intergenic | 35.0% | |
| TCTCTATTCATACCATCAAC+CGG | - | chr1.2:80672128-80672147 | None:intergenic | 35.0% | |
| TTGCAGACTCATTTGTTTGA+TGG | + | chr1.2:80672335-80672354 | MS.gene92949:CDS | 35.0% | |
| ! | AATATTCAAGAAGGCTTTGG+AGG | + | chr1.2:80672157-80672176 | MS.gene92949:CDS | 35.0% |
| !! | ATTTCAGCTTGTTGAGGATT+TGG | - | chr1.2:80672278-80672297 | None:intergenic | 35.0% |
| !!! | AGTGGAAAGGTATTTTCCTT+TGG | + | chr1.2:80671882-80671901 | MS.gene92949:CDS | 35.0% |
| ATCAAGATTGGAGTGACCAA+AGG | - | chr1.2:80671901-80671920 | None:intergenic | 40.0% | |
| CTAGTTGTATTCTCACCTAG+TGG | + | chr1.2:80671864-80671883 | MS.gene92949:CDS | 40.0% | |
| CTCATCTCCAATCTTCTTCT+CGG | - | chr1.2:80672057-80672076 | None:intergenic | 40.0% | |
| CTTTCTTAAAGAGCCCGTTA+CGG | - | chr1.2:80671806-80671825 | None:intergenic | 40.0% | |
| GACTCAAATCAACAACACAC+TGG | + | chr1.2:80672028-80672047 | MS.gene92949:CDS | 40.0% | |
| GAGTCTGCAATTGCAACATA+GGG | - | chr1.2:80672325-80672344 | None:intergenic | 40.0% | |
| GTCTATGACCGTATCAAGAT+TGG | - | chr1.2:80671913-80671932 | None:intergenic | 40.0% | |
| TGAGTCTGCAATTGCAACAT+AGG | - | chr1.2:80672326-80672345 | None:intergenic | 40.0% | |
| TGGTCACTCCAATCTTGATA+CGG | + | chr1.2:80671902-80671921 | MS.gene92949:CDS | 40.0% | |
| TGTATTCTCACCTAGTGGAA+AGG | + | chr1.2:80671869-80671888 | MS.gene92949:CDS | 40.0% | |
| TTGGGATGAGAGAAAGATAG+CGG | - | chr1.2:80671935-80671954 | None:intergenic | 40.0% | |
| ! | GCAATTGCAACATAGGGTTT+TGG | - | chr1.2:80672319-80672338 | None:intergenic | 40.0% |
| !! | GAAGCGTTGCCAACAAAAAA+TGG | - | chr1.2:80672227-80672246 | None:intergenic | 40.0% |
| !! | GGAAACATTTCAGCTTGTTG+AGG | - | chr1.2:80672284-80672303 | None:intergenic | 40.0% |
| !!! | GGGTTTTGGAAAATTTGTGG+TGG | - | chr1.2:80672305-80672324 | None:intergenic | 40.0% |
| CAATTTACGCAAGGAAACCG+AGG | + | chr1.2:80672082-80672101 | MS.gene92949:CDS | 45.0% | |
| CAGCACCATGCAATTCATTG+AGG | + | chr1.2:80671965-80671984 | MS.gene92949:CDS | 45.0% | |
| GTGAGCCTCAATGAATTGCA+TGG | - | chr1.2:80671973-80671992 | None:intergenic | 45.0% | |
| GTTGAGGATTTGGCTGATGA+TGG | - | chr1.2:80672268-80672287 | None:intergenic | 45.0% | |
| TGAGCTGAGCAATTTACGCA+AGG | + | chr1.2:80672073-80672092 | MS.gene92949:CDS | 45.0% | |
| ! | AGCATTGAGTTCACGAACGT+TGG | - | chr1.2:80672003-80672022 | None:intergenic | 45.0% |
| ! | AGGAAACCGAGGCTAAGTTT+TGG | + | chr1.2:80672093-80672112 | MS.gene92949:CDS | 45.0% |
| !! | AAACCGAGGCTAAGTTTTGG+TGG | + | chr1.2:80672096-80672115 | MS.gene92949:CDS | 45.0% |
| !! | AACCGAGGCTAAGTTTTGGT+GGG | + | chr1.2:80672097-80672116 | MS.gene92949:CDS | 45.0% |
| !! | ACTTTCTCAAAGCGCCGTAA+CGG | + | chr1.2:80671789-80671808 | MS.gene92949:CDS | 45.0% |
| !!! | ATTGCATGGTGCTGTCGTTT+TGG | - | chr1.2:80671959-80671978 | None:intergenic | 45.0% |
| !!! | TAAGTTTTGGTGGGCTTGTC+CGG | + | chr1.2:80672106-80672125 | MS.gene92949:CDS | 45.0% |
| !!! | TTGCATGGTGCTGTCGTTTT+GGG | - | chr1.2:80671958-80671977 | None:intergenic | 45.0% |
| AGCAGCATCTGCACCACAAA+GGG | - | chr1.2:80671844-80671863 | None:intergenic | 50.0% | |
| AGCCCACCAAAACTTAGCCT+CGG | - | chr1.2:80672102-80672121 | None:intergenic | 50.0% | |
| AGTGAGCTTTGCACCCTTTG+TGG | + | chr1.2:80671828-80671847 | MS.gene92949:CDS | 50.0% | |
| CTGGATGCCGAGAAGAAGAT+TGG | + | chr1.2:80672047-80672066 | MS.gene92949:CDS | 50.0% | |
| GGCTCGATTATTCCTCACCA+TGG | + | chr1.2:80672356-80672375 | MS.gene92949:CDS | 50.0% | |
| GTTCACGAACGTTGGCATTG+CGG | - | chr1.2:80671995-80672014 | None:intergenic | 50.0% | |
| ! | ACAAAGGGTGCAAAGCTCAC+TGG | - | chr1.2:80671829-80671848 | None:intergenic | 50.0% |
| !! | CTTTCTCAAAGCGCCGTAAC+GGG | + | chr1.2:80671790-80671809 | MS.gene92949:CDS | 50.0% |
| !!! | ATGGTGCTGTCGTTTTGGGT+TGG | - | chr1.2:80671954-80671973 | None:intergenic | 50.0% |
| !!! | TGGTGCTGTCGTTTTGGGTT+GGG | - | chr1.2:80671953-80671972 | None:intergenic | 50.0% |
| GAGCAGCATCTGCACCACAA+AGG | - | chr1.2:80671845-80671864 | None:intergenic | 55.0% | |
| !! | TGGTGGGCTTGTCCGGTTGA+TGG | + | chr1.2:80672113-80672132 | MS.gene92949:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 80671753 | 80672397 | 80671753 | ID=MS.gene92949 |
| chr1.2 | mRNA | 80671753 | 80672397 | 80671753 | ID=MS.gene92949.t1;Parent=MS.gene92949 |
| chr1.2 | exon | 80671753 | 80672397 | 80671753 | ID=MS.gene92949.t1.exon1;Parent=MS.gene92949.t1 |
| chr1.2 | CDS | 80671753 | 80672397 | 80671753 | ID=cds.MS.gene92949.t1;Parent=MS.gene92949.t1 |
| Gene Sequence |
| Protein sequence |
