Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93021.t1 | RHN41744.1 | 99.3 | 148 | 1 | 0 | 1 | 148 | 57 | 204 | 3.30E-81 | 310.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93021.t1 | P35135 | 93.2 | 148 | 10 | 0 | 1 | 148 | 1 | 148 | 5.9e-79 | 294.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93021.t1 | I3S3T5 | 99.3 | 148 | 1 | 0 | 1 | 148 | 1 | 148 | 2.4e-81 | 310.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056522 | MS.gene93021 | 0.811859 | 5.67E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93021.t1 | MTR_8g071040 | 99.324 | 148 | 1 | 0 | 1 | 148 | 1 | 148 | 4.98e-109 | 306 |
MS.gene93021.t1 | MTR_5g075580 | 93.243 | 148 | 10 | 0 | 1 | 148 | 1 | 148 | 1.58e-103 | 292 |
MS.gene93021.t1 | MTR_3g062450 | 93.243 | 148 | 10 | 0 | 1 | 148 | 1 | 148 | 1.58e-103 | 292 |
MS.gene93021.t1 | MTR_7g116940 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 2.06e-102 | 290 |
MS.gene93021.t1 | MTR_1g021150 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 9.56e-102 | 288 |
MS.gene93021.t1 | MTR_7g116940 | 88.387 | 155 | 11 | 1 | 1 | 148 | 1 | 155 | 2.28e-99 | 282 |
MS.gene93021.t1 | MTR_4g073240 | 87.838 | 148 | 18 | 0 | 1 | 148 | 1 | 148 | 1.37e-98 | 280 |
MS.gene93021.t1 | MTR_1g021150 | 91.270 | 126 | 11 | 0 | 23 | 148 | 31 | 156 | 3.51e-86 | 249 |
MS.gene93021.t1 | MTR_5g075580 | 94.118 | 119 | 7 | 0 | 30 | 148 | 1 | 119 | 1.06e-83 | 241 |
MS.gene93021.t1 | MTR_4g073240 | 89.076 | 119 | 13 | 0 | 30 | 148 | 1 | 119 | 1.07e-79 | 231 |
MS.gene93021.t1 | MTR_7g116940 | 89.908 | 109 | 11 | 0 | 1 | 109 | 1 | 109 | 1.48e-68 | 203 |
MS.gene93021.t1 | MTR_8g085690 | 51.034 | 145 | 71 | 0 | 2 | 146 | 23 | 167 | 2.60e-55 | 171 |
MS.gene93021.t1 | MTR_4g073240 | 87.952 | 83 | 10 | 0 | 66 | 148 | 4 | 86 | 3.44e-52 | 160 |
MS.gene93021.t1 | MTR_2g078010 | 49.655 | 145 | 73 | 0 | 4 | 148 | 8 | 152 | 7.28e-48 | 152 |
MS.gene93021.t1 | MTR_8g468530 | 46.575 | 146 | 73 | 1 | 2 | 142 | 21 | 166 | 5.60e-45 | 145 |
MS.gene93021.t1 | MTR_4g108080 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 8.00e-45 | 144 |
MS.gene93021.t1 | MTR_2g078010 | 45.283 | 159 | 73 | 1 | 4 | 148 | 8 | 166 | 8.57e-44 | 142 |
MS.gene93021.t1 | MTR_2g078010 | 48.905 | 137 | 70 | 0 | 4 | 140 | 8 | 144 | 1.03e-42 | 139 |
MS.gene93021.t1 | MTR_3g098780 | 48.611 | 144 | 72 | 2 | 5 | 146 | 6 | 149 | 1.72e-42 | 139 |
MS.gene93021.t1 | MTR_3g098780 | 48.611 | 144 | 72 | 2 | 5 | 146 | 30 | 173 | 3.95e-42 | 139 |
MS.gene93021.t1 | MTR_3g110110 | 42.857 | 147 | 80 | 3 | 5 | 147 | 7 | 153 | 1.81e-35 | 120 |
MS.gene93021.t1 | MTR_4g076200 | 43.750 | 128 | 72 | 0 | 4 | 131 | 35 | 162 | 1.23e-34 | 119 |
MS.gene93021.t1 | MTR_4g108080 | 48.571 | 105 | 54 | 0 | 2 | 106 | 5 | 109 | 8.76e-34 | 115 |
MS.gene93021.t1 | MTR_5g009020 | 42.424 | 132 | 75 | 1 | 4 | 135 | 35 | 165 | 3.42e-33 | 115 |
MS.gene93021.t1 | MTR_4g076200 | 45.133 | 113 | 62 | 0 | 19 | 131 | 9 | 121 | 1.81e-32 | 112 |
MS.gene93021.t1 | MTR_4g108080 | 47.706 | 109 | 52 | 1 | 39 | 142 | 42 | 150 | 1.08e-31 | 110 |
MS.gene93021.t1 | MTR_1g095510 | 42.537 | 134 | 75 | 2 | 3 | 135 | 43 | 175 | 1.96e-31 | 111 |
MS.gene93021.t1 | MTR_2g078010 | 48.515 | 101 | 52 | 0 | 4 | 104 | 8 | 108 | 2.99e-31 | 108 |
MS.gene93021.t1 | MTR_1g095510 | 44.737 | 114 | 62 | 1 | 22 | 135 | 9 | 121 | 2.85e-30 | 107 |
MS.gene93021.t1 | MTR_4g094872 | 36.842 | 152 | 89 | 3 | 1 | 145 | 4 | 155 | 3.58e-29 | 104 |
MS.gene93021.t1 | MTR_1g095510 | 45.946 | 111 | 59 | 1 | 3 | 112 | 43 | 153 | 6.92e-29 | 104 |
MS.gene93021.t1 | MTR_8g028920 | 34.459 | 148 | 94 | 3 | 1 | 146 | 1 | 147 | 1.66e-26 | 98.6 |
MS.gene93021.t1 | MTR_5g016630 | 32.895 | 152 | 95 | 2 | 1 | 145 | 4 | 155 | 2.87e-26 | 97.4 |
MS.gene93021.t1 | MTR_5g019480 | 35.766 | 137 | 83 | 3 | 5 | 139 | 36 | 169 | 4.11e-26 | 97.8 |
MS.gene93021.t1 | MTR_5g019480 | 35.766 | 137 | 83 | 3 | 5 | 139 | 33 | 166 | 4.11e-26 | 97.4 |
MS.gene93021.t1 | MTR_4g063490 | 33.333 | 135 | 76 | 2 | 15 | 135 | 18 | 152 | 1.30e-25 | 95.9 |
MS.gene93021.t1 | MTR_5g019480 | 38.393 | 112 | 68 | 1 | 28 | 139 | 8 | 118 | 3.04e-25 | 94.0 |
MS.gene93021.t1 | MTR_7g087590 | 34.266 | 143 | 94 | 0 | 4 | 146 | 13 | 155 | 5.22e-25 | 96.7 |
MS.gene93021.t1 | MTR_8g098595 | 35.772 | 123 | 77 | 2 | 26 | 146 | 10 | 132 | 6.57e-25 | 94.0 |
MS.gene93021.t1 | MTR_8g028920 | 37.736 | 106 | 64 | 2 | 43 | 146 | 3 | 108 | 4.84e-23 | 88.6 |
MS.gene93021.t1 | MTR_4g106690 | 29.730 | 148 | 101 | 3 | 1 | 146 | 1 | 147 | 7.31e-23 | 89.4 |
MS.gene93021.t1 | MTR_2g096690 | 31.944 | 144 | 84 | 2 | 15 | 144 | 18 | 161 | 8.32e-23 | 88.6 |
MS.gene93021.t1 | MTR_2g096690 | 36.000 | 125 | 66 | 2 | 15 | 125 | 18 | 142 | 5.16e-22 | 86.7 |
MS.gene93021.t1 | MTR_8g076490 | 40.777 | 103 | 59 | 2 | 1 | 102 | 15 | 116 | 1.25e-20 | 82.8 |
MS.gene93021.t1 | MTR_5g021260 | 36.893 | 103 | 63 | 2 | 1 | 102 | 15 | 116 | 4.06e-18 | 76.3 |
MS.gene93021.t1 | MTR_4g121960 | 33.333 | 117 | 72 | 3 | 2 | 114 | 11 | 125 | 2.20e-17 | 77.0 |
MS.gene93021.t1 | MTR_8g023380 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.12e-17 | 75.9 |
MS.gene93021.t1 | MTR_7g451800 | 35.246 | 122 | 69 | 3 | 4 | 115 | 38 | 159 | 3.48e-15 | 71.2 |
MS.gene93021.t1 | MTR_7g047620 | 35.246 | 122 | 69 | 3 | 4 | 115 | 38 | 159 | 3.48e-15 | 71.2 |
MS.gene93021.t1 | MTR_2g096690 | 35.354 | 99 | 50 | 2 | 15 | 99 | 18 | 116 | 4.60e-15 | 67.4 |
MS.gene93021.t1 | MTR_7g047570 | 35.246 | 122 | 69 | 3 | 4 | 115 | 38 | 159 | 4.70e-15 | 70.9 |
MS.gene93021.t1 | MTR_7g451770 | 35.246 | 122 | 69 | 3 | 4 | 115 | 38 | 159 | 4.70e-15 | 70.9 |
MS.gene93021.t1 | MTR_1g028540 | 73.913 | 46 | 12 | 0 | 102 | 147 | 83 | 128 | 5.26e-15 | 67.4 |
MS.gene93021.t1 | MTR_7g023760 | 30.081 | 123 | 76 | 3 | 3 | 115 | 90 | 212 | 3.28e-14 | 68.6 |
MS.gene93021.t1 | MTR_0274s0030 | 30.894 | 123 | 75 | 3 | 3 | 115 | 113 | 235 | 6.43e-14 | 67.8 |
MS.gene93021.t1 | MTR_2g013650 | 28.477 | 151 | 95 | 4 | 3 | 143 | 681 | 828 | 1.37e-13 | 67.4 |
MS.gene93021.t1 | MTR_4g088835 | 29.333 | 150 | 93 | 4 | 4 | 143 | 672 | 818 | 2.18e-13 | 66.6 |
MS.gene93021.t1 | MTR_4g020620 | 30.894 | 123 | 75 | 3 | 3 | 115 | 570 | 692 | 6.40e-13 | 65.5 |
MS.gene93021.t1 | MTR_4g020620 | 30.894 | 123 | 75 | 3 | 3 | 115 | 628 | 750 | 6.40e-13 | 65.5 |
MS.gene93021.t1 | MTR_4g086440 | 31.148 | 122 | 74 | 3 | 4 | 115 | 37 | 158 | 1.58e-12 | 63.5 |
MS.gene93021.t1 | MTR_1g073600 | 26.606 | 109 | 66 | 2 | 33 | 140 | 25 | 120 | 2.27e-12 | 60.8 |
MS.gene93021.t1 | MTR_1g112730 | 29.508 | 122 | 76 | 3 | 4 | 115 | 856 | 977 | 6.55e-12 | 62.4 |
MS.gene93021.t1 | MTR_2g079270 | 29.268 | 123 | 77 | 3 | 3 | 115 | 306 | 428 | 7.83e-12 | 62.0 |
MS.gene93021.t1 | MTR_1g092465 | 28.105 | 153 | 84 | 5 | 2 | 144 | 240 | 376 | 7.99e-12 | 62.0 |
MS.gene93021.t1 | MTR_1g092460 | 27.642 | 123 | 79 | 3 | 3 | 115 | 176 | 298 | 9.91e-12 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93021.t1 | AT1G64230 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 7.51e-103 | 291 |
MS.gene93021.t1 | AT1G64230 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 7.51e-103 | 291 |
MS.gene93021.t1 | AT5G41700 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.16e-102 | 290 |
MS.gene93021.t1 | AT5G41700 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.16e-102 | 290 |
MS.gene93021.t1 | AT5G41700 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.16e-102 | 290 |
MS.gene93021.t1 | AT5G53300 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 1.73e-102 | 290 |
MS.gene93021.t1 | AT5G53300 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 1.73e-102 | 290 |
MS.gene93021.t1 | AT5G53300 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 1.73e-102 | 290 |
MS.gene93021.t1 | AT4G27960 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 3.41e-102 | 289 |
MS.gene93021.t1 | AT4G27960 | 91.892 | 148 | 12 | 0 | 1 | 148 | 31 | 178 | 2.16e-101 | 288 |
MS.gene93021.t1 | AT3G08690 | 90.541 | 148 | 14 | 0 | 1 | 148 | 1 | 148 | 3.95e-101 | 286 |
MS.gene93021.t1 | AT3G08690 | 90.541 | 148 | 14 | 0 | 1 | 148 | 1 | 148 | 3.95e-101 | 286 |
MS.gene93021.t1 | AT5G56150 | 88.514 | 148 | 17 | 0 | 1 | 148 | 1 | 148 | 1.76e-100 | 285 |
MS.gene93021.t1 | AT5G41700 | 90.604 | 149 | 13 | 1 | 1 | 148 | 1 | 149 | 7.82e-100 | 283 |
MS.gene93021.t1 | AT1G64230 | 85.987 | 157 | 13 | 1 | 1 | 148 | 1 | 157 | 1.97e-98 | 280 |
MS.gene93021.t1 | AT2G16740 | 85.034 | 147 | 22 | 0 | 1 | 147 | 1 | 147 | 1.59e-95 | 272 |
MS.gene93021.t1 | AT1G64230 | 71.053 | 190 | 13 | 1 | 1 | 148 | 1 | 190 | 5.96e-94 | 270 |
MS.gene93021.t1 | AT1G64230 | 71.053 | 190 | 13 | 1 | 1 | 148 | 1 | 190 | 5.96e-94 | 270 |
MS.gene93021.t1 | AT3G08700 | 78.523 | 149 | 31 | 1 | 1 | 148 | 1 | 149 | 8.69e-87 | 250 |
MS.gene93021.t1 | AT3G08700 | 78.523 | 149 | 31 | 1 | 1 | 148 | 1 | 149 | 8.69e-87 | 250 |
MS.gene93021.t1 | AT5G41700 | 90.385 | 104 | 10 | 0 | 1 | 104 | 1 | 104 | 3.36e-68 | 203 |
MS.gene93021.t1 | AT5G53300 | 88.991 | 109 | 10 | 1 | 1 | 107 | 1 | 109 | 1.19e-67 | 200 |
MS.gene93021.t1 | AT5G56150 | 88.350 | 103 | 12 | 0 | 1 | 103 | 1 | 103 | 6.87e-67 | 198 |
MS.gene93021.t1 | AT3G13550 | 46.897 | 145 | 77 | 0 | 2 | 146 | 37 | 181 | 1.33e-52 | 165 |
MS.gene93021.t1 | AT1G78870 | 50.345 | 145 | 72 | 0 | 4 | 148 | 8 | 152 | 3.40e-48 | 152 |
MS.gene93021.t1 | AT1G16890 | 49.655 | 145 | 73 | 0 | 4 | 148 | 8 | 152 | 5.20e-48 | 152 |
MS.gene93021.t1 | AT1G14400 | 47.260 | 146 | 72 | 1 | 2 | 142 | 5 | 150 | 3.10e-45 | 145 |
MS.gene93021.t1 | AT1G14400 | 47.260 | 146 | 72 | 1 | 2 | 142 | 5 | 150 | 3.10e-45 | 145 |
MS.gene93021.t1 | AT1G16890 | 47.403 | 154 | 72 | 1 | 4 | 148 | 8 | 161 | 3.30e-45 | 145 |
MS.gene93021.t1 | AT5G62540 | 50.376 | 133 | 66 | 0 | 2 | 134 | 5 | 137 | 5.87e-45 | 144 |
MS.gene93021.t1 | AT2G02760 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 6.88e-45 | 144 |
MS.gene93021.t1 | AT2G02760 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 6.88e-45 | 144 |
MS.gene93021.t1 | AT2G02760 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 6.88e-45 | 144 |
MS.gene93021.t1 | AT2G02760 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 6.88e-45 | 144 |
MS.gene93021.t1 | AT1G36340 | 46.897 | 145 | 76 | 1 | 2 | 146 | 9 | 152 | 1.22e-43 | 141 |
MS.gene93021.t1 | AT1G36340 | 46.897 | 145 | 76 | 1 | 2 | 146 | 9 | 152 | 1.22e-43 | 141 |
MS.gene93021.t1 | AT3G13550 | 50.000 | 114 | 57 | 0 | 2 | 115 | 37 | 150 | 2.88e-42 | 138 |
MS.gene93021.t1 | AT1G16890 | 52.941 | 119 | 56 | 0 | 30 | 148 | 1 | 119 | 5.15e-42 | 136 |
MS.gene93021.t1 | AT1G78870 | 52.941 | 119 | 56 | 0 | 30 | 148 | 1 | 119 | 1.17e-41 | 135 |
MS.gene93021.t1 | AT1G78870 | 52.500 | 120 | 56 | 1 | 30 | 148 | 1 | 120 | 6.35e-40 | 130 |
MS.gene93021.t1 | AT5G50870 | 45.833 | 144 | 76 | 2 | 5 | 146 | 6 | 149 | 1.38e-39 | 132 |
MS.gene93021.t1 | AT5G50870 | 42.581 | 155 | 76 | 3 | 5 | 146 | 6 | 160 | 3.44e-36 | 124 |
MS.gene93021.t1 | AT3G24515 | 43.949 | 157 | 75 | 3 | 3 | 146 | 8 | 164 | 4.44e-35 | 125 |
MS.gene93021.t1 | AT2G32790 | 50.794 | 126 | 58 | 2 | 25 | 148 | 54 | 177 | 6.32e-34 | 117 |
MS.gene93021.t1 | AT5G25760 | 40.136 | 147 | 84 | 3 | 5 | 147 | 7 | 153 | 6.80e-33 | 114 |
MS.gene93021.t1 | AT5G25760 | 40.136 | 147 | 84 | 3 | 5 | 147 | 7 | 153 | 6.80e-33 | 114 |
MS.gene93021.t1 | AT1G78870 | 48.571 | 105 | 54 | 0 | 4 | 108 | 8 | 112 | 2.91e-32 | 111 |
MS.gene93021.t1 | AT3G24515 | 45.902 | 122 | 62 | 1 | 29 | 146 | 68 | 189 | 5.49e-32 | 118 |
MS.gene93021.t1 | AT3G20060 | 42.424 | 132 | 75 | 1 | 4 | 135 | 39 | 169 | 6.05e-32 | 112 |
MS.gene93021.t1 | AT1G50490 | 43.182 | 132 | 74 | 1 | 4 | 135 | 38 | 168 | 1.80e-31 | 111 |
MS.gene93021.t1 | AT3G20060 | 44.737 | 114 | 62 | 1 | 22 | 135 | 12 | 124 | 5.35e-30 | 106 |
MS.gene93021.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 1.15e-28 | 104 |
MS.gene93021.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 1.15e-28 | 104 |
MS.gene93021.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 73 | 219 | 2.82e-28 | 105 |
MS.gene93021.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 9.60e-28 | 102 |
MS.gene93021.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 9.60e-28 | 102 |
MS.gene93021.t1 | AT3G57870 | 34.211 | 152 | 93 | 2 | 1 | 145 | 5 | 156 | 3.22e-27 | 99.8 |
MS.gene93021.t1 | AT5G41340 | 34.459 | 148 | 94 | 3 | 1 | 146 | 1 | 147 | 1.95e-26 | 98.6 |
MS.gene93021.t1 | AT1G63800 | 35.135 | 148 | 93 | 3 | 1 | 146 | 1 | 147 | 2.15e-26 | 98.6 |
MS.gene93021.t1 | AT1G63800 | 37.398 | 123 | 75 | 2 | 26 | 146 | 10 | 132 | 3.15e-26 | 97.4 |
MS.gene93021.t1 | AT5G05080 | 35.664 | 143 | 92 | 0 | 4 | 146 | 13 | 155 | 3.48e-26 | 99.4 |
MS.gene93021.t1 | AT5G05080 | 35.664 | 143 | 92 | 0 | 4 | 146 | 13 | 155 | 3.48e-26 | 99.4 |
MS.gene93021.t1 | AT5G05080 | 35.664 | 143 | 92 | 0 | 4 | 146 | 13 | 155 | 3.48e-26 | 99.4 |
MS.gene93021.t1 | AT5G05080 | 35.664 | 143 | 92 | 0 | 4 | 146 | 13 | 155 | 3.48e-26 | 99.4 |
MS.gene93021.t1 | AT3G55380 | 34.815 | 135 | 74 | 2 | 15 | 135 | 19 | 153 | 8.67e-26 | 96.3 |
MS.gene93021.t1 | AT4G36800 | 35.036 | 137 | 84 | 3 | 5 | 139 | 34 | 167 | 1.25e-25 | 96.3 |
MS.gene93021.t1 | AT4G36800 | 35.036 | 137 | 84 | 3 | 5 | 139 | 34 | 167 | 1.25e-25 | 96.3 |
MS.gene93021.t1 | AT5G59300 | 32.639 | 144 | 83 | 2 | 15 | 144 | 18 | 161 | 1.56e-23 | 90.5 |
MS.gene93021.t1 | AT3G46460 | 31.944 | 144 | 84 | 2 | 15 | 144 | 18 | 161 | 2.56e-23 | 90.1 |
MS.gene93021.t1 | AT2G18600 | 33.577 | 137 | 86 | 3 | 5 | 139 | 35 | 168 | 4.34e-23 | 89.7 |
MS.gene93021.t1 | AT2G18600 | 33.577 | 137 | 86 | 3 | 5 | 139 | 35 | 168 | 4.34e-23 | 89.7 |
MS.gene93021.t1 | AT5G41340 | 38.462 | 104 | 62 | 2 | 45 | 146 | 9 | 112 | 7.81e-23 | 88.2 |
MS.gene93021.t1 | AT3G17000 | 36.752 | 117 | 68 | 3 | 2 | 114 | 12 | 126 | 2.03e-20 | 85.5 |
MS.gene93021.t1 | AT1G75440 | 38.889 | 108 | 60 | 3 | 1 | 107 | 15 | 117 | 4.22e-19 | 79.0 |
MS.gene93021.t1 | AT3G55380 | 27.811 | 169 | 74 | 3 | 15 | 135 | 19 | 187 | 1.13e-18 | 79.0 |
MS.gene93021.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.40e-18 | 79.3 |
MS.gene93021.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.40e-18 | 79.3 |
MS.gene93021.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.40e-18 | 79.3 |
MS.gene93021.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.40e-18 | 79.3 |
MS.gene93021.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.40e-18 | 79.3 |
MS.gene93021.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.40e-18 | 79.3 |
MS.gene93021.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.40e-18 | 79.3 |
MS.gene93021.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.40e-18 | 79.3 |
MS.gene93021.t1 | AT1G45050 | 37.864 | 103 | 62 | 2 | 1 | 102 | 15 | 116 | 1.45e-18 | 77.4 |
MS.gene93021.t1 | AT5G50430 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.70e-18 | 79.3 |
MS.gene93021.t1 | AT5G50430 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 1.70e-18 | 79.3 |
MS.gene93021.t1 | AT5G42990 | 38.835 | 103 | 61 | 2 | 1 | 102 | 15 | 116 | 1.73e-18 | 77.4 |
MS.gene93021.t1 | AT4G36410 | 36.111 | 108 | 63 | 3 | 1 | 107 | 15 | 117 | 4.07e-18 | 76.3 |
MS.gene93021.t1 | AT1G17280 | 32.520 | 123 | 68 | 3 | 4 | 115 | 8 | 126 | 2.62e-17 | 75.9 |
MS.gene93021.t1 | AT3G46460 | 29.730 | 111 | 65 | 1 | 47 | 144 | 9 | 119 | 3.67e-16 | 70.5 |
MS.gene93021.t1 | AT3G46460 | 29.730 | 111 | 65 | 1 | 47 | 144 | 9 | 119 | 3.67e-16 | 70.5 |
MS.gene93021.t1 | AT3G15355 | 28.289 | 152 | 96 | 4 | 3 | 144 | 334 | 482 | 3.79e-12 | 63.2 |
MS.gene93021.t1 | AT1G45050 | 34.831 | 89 | 56 | 2 | 1 | 88 | 15 | 102 | 5.18e-12 | 59.3 |
MS.gene93021.t1 | AT5G50430 | 30.769 | 117 | 59 | 4 | 4 | 115 | 8 | 107 | 2.39e-11 | 59.7 |
MS.gene93021.t1 | AT1G53025 | 26.000 | 150 | 98 | 4 | 4 | 143 | 274 | 420 | 4.19e-11 | 60.1 |
MS.gene93021.t1 | AT1G53025 | 26.000 | 150 | 98 | 4 | 4 | 143 | 274 | 420 | 4.55e-11 | 60.1 |
Find 63 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGGGCTCCATTGCTCTTTC+AGG | 0.120840 | 8.2:-32224867 | None:intergenic |
CTACCGTTACTGTTGATATT+AGG | 0.137672 | 8.2:-32224829 | None:intergenic |
CTTAACCCATGGCATATTTC+TGG | 0.152621 | 8.2:-32225431 | None:intergenic |
CCATTGGCAAGCTACAATTA+TGG | 0.267578 | 8.2:+32223639 | MS.gene93021:CDS |
CAGAAATATGCCATGGGTTA+AGG | 0.286801 | 8.2:+32225432 | MS.gene93021:CDS |
TTGTACATATGAGCAATTTC+AGG | 0.311190 | 8.2:-32225366 | None:intergenic |
CCCGCAAATGGGCTATCTCC+TGG | 0.316820 | 8.2:-32223664 | None:intergenic |
TACCGTTACTGTTGATATTA+GGG | 0.326660 | 8.2:-32224828 | None:intergenic |
CATTGGCAAGCTACAATTAT+GGG | 0.330983 | 8.2:+32223640 | MS.gene93021:CDS |
CCTCCTGCTTCTTGCAGTGC+TGG | 0.366048 | 8.2:+32222399 | MS.gene93021:CDS |
TTAACCCATGGCATATTTCT+GGG | 0.371740 | 8.2:-32225430 | None:intergenic |
AGAAATATGCCATGGGTTAA+GGG | 0.381920 | 8.2:+32225433 | MS.gene93021:CDS |
CCAGGAGATAGCCCATTTGC+GGG | 0.390432 | 8.2:+32223664 | MS.gene93021:CDS |
TTCCTTATTGATCCGCTTTG+AGG | 0.396653 | 8.2:-32222355 | None:intergenic |
AGAAACACACCTCCCGCAAA+TGG | 0.400575 | 8.2:-32223676 | None:intergenic |
ACCTTGGATATTGTGAGGGC+AGG | 0.405744 | 8.2:-32224886 | None:intergenic |
TCAGGGACCAGAGGATCATC+TGG | 0.406568 | 8.2:-32225348 | None:intergenic |
GGCCTCAAAGCGGATCAATA+AGG | 0.439633 | 8.2:+32222353 | MS.gene93021:CDS |
GAATTTGGGTTTACCTTGGG+TGG | 0.439702 | 8.2:-32223736 | None:intergenic |
ATCAGTCAACAGAGAACAAA+TGG | 0.443192 | 8.2:-32225319 | None:intergenic |
CCCAGGAGATAGCCCATTTG+CGG | 0.455352 | 8.2:+32223663 | MS.gene93021:CDS |
GCGGATCAATAAGGAATTGA+AGG | 0.460462 | 8.2:+32222362 | MS.gene93021:CDS |
CCGCAAATGGGCTATCTCCT+GGG | 0.465958 | 8.2:-32223663 | None:intergenic |
TCCCAACCCAGATGATCCTC+TGG | 0.480906 | 8.2:+32225341 | MS.gene93021:CDS |
ACCAGAGGATCATCTGGGTT+GGG | 0.483549 | 8.2:-32225342 | None:intergenic |
TTTACCTTGGGTGGTTTGAA+AGG | 0.493166 | 8.2:-32223727 | None:intergenic |
TGTACATATGAGCAATTTCA+GGG | 0.503724 | 8.2:-32225365 | None:intergenic |
ATGAGGCCACTGCTCGGTCA+TGG | 0.505125 | 8.2:+32225406 | MS.gene93021:CDS |
GAAACACACCTCCCGCAAAT+GGG | 0.512424 | 8.2:-32223675 | None:intergenic |
TGTGCAAATTCACTTCCCTC+CGG | 0.514742 | 8.2:+32223699 | MS.gene93021:CDS |
GGTGGTTTGAAAGGATAATC+CGG | 0.519248 | 8.2:-32223718 | None:intergenic |
GACCAGAGGATCATCTGGGT+TGG | 0.531915 | 8.2:-32225343 | None:intergenic |
CCTTGGATATTGTGAGGGCA+GGG | 0.540091 | 8.2:-32224885 | None:intergenic |
ATACCAGCACTGCAAGAAGC+AGG | 0.544134 | 8.2:-32222402 | None:intergenic |
CAAGCTACAATTATGGGCCC+AGG | 0.551929 | 8.2:+32223646 | MS.gene93021:CDS |
GAGTGACAAAGCTAAGTATG+AGG | 0.561393 | 8.2:+32225389 | MS.gene93021:CDS |
ATTGCTCTTTCAGGATGTCA+AGG | 0.568753 | 8.2:-32224858 | None:intergenic |
TGGAACATATCATCAGCGAC+AGG | 0.569142 | 8.2:-32223619 | None:intergenic |
CTAAGTATGAGGCCACTGCT+CGG | 0.591968 | 8.2:+32225400 | MS.gene93021:CDS |
AGATCACCTTGGATATTGTG+AGG | 0.593954 | 8.2:-32224891 | None:intergenic |
CCCTGCCCTCACAATATCCA+AGG | 0.594906 | 8.2:+32224885 | MS.gene93021:CDS |
ATGGACCCAGAAATATGCCA+TGG | 0.598403 | 8.2:+32225425 | MS.gene93021:CDS |
CTTGGCCATCCCTTAACCCA+TGG | 0.604057 | 8.2:-32225442 | None:intergenic |
GATCACCTTGGATATTGTGA+GGG | 0.604360 | 8.2:-32224890 | None:intergenic |
CAGGGACCAGAGGATCATCT+GGG | 0.604692 | 8.2:-32225347 | None:intergenic |
CACCCTAATATCAACAGTAA+CGG | 0.606586 | 8.2:+32224826 | MS.gene93021:CDS |
GGAATTGAAGGACTTGCAGA+AGG | 0.606883 | 8.2:+32222374 | MS.gene93021:CDS |
TTGACATCCTGAAAGAGCAA+TGG | 0.608625 | 8.2:+32224860 | MS.gene93021:CDS |
CCATAATTGTAGCTTGCCAA+TGG | 0.608901 | 8.2:-32223639 | None:intergenic |
TTATCCTTTCAAACCACCCA+AGG | 0.609431 | 8.2:+32223723 | MS.gene93021:CDS |
TCGCTGATGATATGTTCCAT+TGG | 0.614388 | 8.2:+32223623 | MS.gene93021:CDS |
CGTTACTGTTGATATTAGGG+TGG | 0.631865 | 8.2:-32224825 | None:intergenic |
CTGGGTCCATGACCGAGCAG+TGG | 0.634278 | 8.2:-32225412 | None:intergenic |
TCAGGTTTCATTCCGCACAA+AGG | 0.634356 | 8.2:+32224798 | MS.gene93021:intron |
GGAACATATCATCAGCGACA+GGG | 0.652409 | 8.2:-32223618 | None:intergenic |
TAGGGTGGAAAACCTTTGTG+CGG | 0.653142 | 8.2:-32224810 | None:intergenic |
TGGACCCAGAAATATGCCAT+GGG | 0.659562 | 8.2:+32225426 | MS.gene93021:CDS |
TGAGCAATTTCAGGGACCAG+AGG | 0.676101 | 8.2:-32225357 | None:intergenic |
CCAGCACTGCAAGAAGCAGG+AGG | 0.681403 | 8.2:-32222399 | None:intergenic |
GTTTGAAAGGATAATCCGGA+GGG | 0.687186 | 8.2:-32223714 | None:intergenic |
GGAGATAGCCCATTTGCGGG+AGG | 0.688783 | 8.2:+32223667 | MS.gene93021:CDS |
GGTTTGAAAGGATAATCCGG+AGG | 0.710430 | 8.2:-32223715 | None:intergenic |
TTACCGAGATGGCCTCAAAG+CGG | 0.762010 | 8.2:+32222343 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAAATATCAATTGTAT+TGG | + | chr8.2:32224019-32224038 | MS.gene93021:intron | 10.0% |
!!! | TAAAATTTTAACAAAGTTTT+AGG | + | chr8.2:32222736-32222755 | MS.gene93021:intron | 10.0% |
!! | AAAAAAAACAAATAAAACAG+AGG | - | chr8.2:32222520-32222539 | None:intergenic | 15.0% |
!! | AAAAAAACAAATAAAACAGA+GGG | - | chr8.2:32222519-32222538 | None:intergenic | 15.0% |
!! | TGATTATGATAACTTAAAAT+TGG | + | chr8.2:32222952-32222971 | MS.gene93021:intron | 15.0% |
!!! | CATTATTTAATTTCATTAAG+TGG | - | chr8.2:32222666-32222685 | None:intergenic | 15.0% |
!!! | TATTTGAAGCAAAAATAATT+GGG | - | chr8.2:32224187-32224206 | None:intergenic | 15.0% |
!! | CCATTAACTACAATTAATAT+GGG | - | chr8.2:32225027-32225046 | None:intergenic | 20.0% |
!! | TAAAATGTAAGATCATAAGA+AGG | - | chr8.2:32224401-32224420 | None:intergenic | 20.0% |
!! | TCAAAAGACAATTATTAAAG+AGG | - | chr8.2:32223521-32223540 | None:intergenic | 20.0% |
!! | TCCATTAACTACAATTAATA+TGG | - | chr8.2:32225028-32225047 | None:intergenic | 20.0% |
!!! | AATAAATAAGAGTGTATTAG+TGG | + | chr8.2:32225070-32225089 | MS.gene93021:intron | 20.0% |
!!! | AATGACTTATTTTATTGCTT+TGG | + | chr8.2:32223282-32223301 | MS.gene93021:intron | 20.0% |
!!! | CGAAAACTTAATATTGATTT+TGG | + | chr8.2:32222870-32222889 | MS.gene93021:intron | 20.0% |
!!! | CTTGTTTTTAATTTTTATGC+AGG | + | chr8.2:32223595-32223614 | MS.gene93021:intron | 20.0% |
!!! | GTATTTGAAGCAAAAATAAT+TGG | - | chr8.2:32224188-32224207 | None:intergenic | 20.0% |
!!! | TAAGTTATCATAATCACTTT+TGG | - | chr8.2:32222948-32222967 | None:intergenic | 20.0% |
!!! | TCTAAAATGACAAATTATAC+TGG | + | chr8.2:32225204-32225223 | MS.gene93021:intron | 20.0% |
!!! | TTAAATTGTGGTTTTAACAA+CGG | - | chr8.2:32224079-32224098 | None:intergenic | 20.0% |
! | AAACTTGAATCATTTCATGT+GGG | - | chr8.2:32223328-32223347 | None:intergenic | 25.0% |
! | AAGCAAAAATAATTGGGATT+TGG | - | chr8.2:32224181-32224200 | None:intergenic | 25.0% |
! | AGCAAAAATAATTGGGATTT+GGG | - | chr8.2:32224180-32224199 | None:intergenic | 25.0% |
! | ATAGAATATTAAGATCACCT+TGG | - | chr8.2:32224905-32224924 | None:intergenic | 25.0% |
! | ATATATGTGTTTGATAGATC+AGG | - | chr8.2:32222437-32222456 | None:intergenic | 25.0% |
! | ATTTGCATAAAGCAGAATTT+GGG | - | chr8.2:32223753-32223772 | None:intergenic | 25.0% |
! | CATTCATTATCAATATGTTC+AGG | + | chr8.2:32224780-32224799 | MS.gene93021:intron | 25.0% |
! | CCAGTTAAAACAAATTTCAT+AGG | - | chr8.2:32223011-32223030 | None:intergenic | 25.0% |
! | CCCATATTAATTGTAGTTAA+TGG | + | chr8.2:32225024-32225043 | MS.gene93021:intron | 25.0% |
! | TAAACTTGAATCATTTCATG+TGG | - | chr8.2:32223329-32223348 | None:intergenic | 25.0% |
! | TATCAAACACATATATTCCT+CGG | + | chr8.2:32222441-32222460 | MS.gene93021:intron | 25.0% |
! | TCCTACAAATATAATTACTG+AGG | - | chr8.2:32224446-32224465 | None:intergenic | 25.0% |
! | TCCTCAGTAATTATATTTGT+AGG | + | chr8.2:32224442-32224461 | MS.gene93021:intron | 25.0% |
! | TTCCAATATTACCAACAAAA+GGG | - | chr8.2:32224552-32224571 | None:intergenic | 25.0% |
!! | ATTTTTGCTTCAAATACACT+GGG | + | chr8.2:32224191-32224210 | MS.gene93021:intron | 25.0% |
!! | CTGAAATATTAGAATTTTGC+AGG | + | chr8.2:32225287-32225306 | MS.gene93021:intron | 25.0% |
!! | GAATGTTTAGATTCTCTTTT+GGG | + | chr8.2:32222918-32222937 | MS.gene93021:intron | 25.0% |
!! | TGAATGTTTAGATTCTCTTT+TGG | + | chr8.2:32222917-32222936 | MS.gene93021:intron | 25.0% |
!! | TTGTTTGAATTTTCTTGTCA+GGG | + | chr8.2:32225261-32225280 | MS.gene93021:intron | 25.0% |
!! | TTTGTTTGAATTTTCTTGTC+AGG | + | chr8.2:32225260-32225279 | MS.gene93021:intron | 25.0% |
!!! | AAGTGAATGGAATAGTTTTT+TGG | + | chr8.2:32225237-32225256 | MS.gene93021:intron | 25.0% |
!!! | CCTATGAAATTTGTTTTAAC+TGG | + | chr8.2:32223008-32223027 | MS.gene93021:intron | 25.0% |
!!! | GTTTTGACTTTTGATATGTT+TGG | + | chr8.2:32222974-32222993 | MS.gene93021:intron | 25.0% |
!!! | TATTGATTTTGGAATGTTTG+AGG | + | chr8.2:32222881-32222900 | MS.gene93021:intron | 25.0% |
!!! | TATTTTTGCTTCAAATACAC+TGG | + | chr8.2:32224190-32224209 | MS.gene93021:intron | 25.0% |
AAATGAGCTTCATTTACGAA+AGG | + | chr8.2:32225000-32225019 | MS.gene93021:intron | 30.0% | |
AAGATGAGATAAAGTGAACT+GGG | + | chr8.2:32223356-32223375 | MS.gene93021:intron | 30.0% | |
AAGCATTAAAATAAGTCGAC+AGG | - | chr8.2:32223199-32223218 | None:intergenic | 30.0% | |
AATGTATAACAGACACATGT+TGG | + | chr8.2:32223770-32223789 | MS.gene93021:intron | 30.0% | |
ACACAAAGTGGAATTATGAA+GGG | - | chr8.2:32224746-32224765 | None:intergenic | 30.0% | |
ACACACATCCATATACATAT+AGG | - | chr8.2:32222803-32222822 | None:intergenic | 30.0% | |
ACACATCCATATACATATAG+GGG | - | chr8.2:32222801-32222820 | None:intergenic | 30.0% | |
ACAGAGGGAATAATAAATCA+AGG | - | chr8.2:32222504-32222523 | None:intergenic | 30.0% | |
ATAATTACTGAGGATCAGAA+TGG | - | chr8.2:32224436-32224455 | None:intergenic | 30.0% | |
ATGTATAACAGACACATGTT+GGG | + | chr8.2:32223771-32223790 | MS.gene93021:intron | 30.0% | |
ATTCTGATACTACAAACATG+TGG | - | chr8.2:32223246-32223265 | None:intergenic | 30.0% | |
CACACATCCATATACATATA+GGG | - | chr8.2:32222802-32222821 | None:intergenic | 30.0% | |
CATTTGCATAAAGCAGAATT+TGG | - | chr8.2:32223754-32223773 | None:intergenic | 30.0% | |
CGATCATGCAATTTAAATTG+TGG | - | chr8.2:32224091-32224110 | None:intergenic | 30.0% | |
CTTCCAATATTACCAACAAA+AGG | - | chr8.2:32224553-32224572 | None:intergenic | 30.0% | |
GCAAAAATAATTGGGATTTG+GGG | - | chr8.2:32224179-32224198 | None:intergenic | 30.0% | |
TAAGATGAGATAAAGTGAAC+TGG | + | chr8.2:32223355-32223374 | MS.gene93021:intron | 30.0% | |
TAATTACTGAGGATCAGAAT+GGG | - | chr8.2:32224435-32224454 | None:intergenic | 30.0% | |
TACCGTTACTGTTGATATTA+GGG | - | chr8.2:32224831-32224850 | None:intergenic | 30.0% | |
TCAGAATCAAACATAACACA+TGG | - | chr8.2:32224363-32224382 | None:intergenic | 30.0% | |
TCCAATATTACCAACAAAAG+GGG | - | chr8.2:32224551-32224570 | None:intergenic | 30.0% | |
TGATTTCCATTGTTATATGC+TGG | - | chr8.2:32223906-32223925 | None:intergenic | 30.0% | |
TGTACATATGAGCAATTTCA+GGG | - | chr8.2:32225368-32225387 | None:intergenic | 30.0% | |
TTGTACATATGAGCAATTTC+AGG | - | chr8.2:32225369-32225388 | None:intergenic | 30.0% | |
TTGTATGCATATTCACCTTT+GGG | + | chr8.2:32222830-32222849 | MS.gene93021:intron | 30.0% | |
! | GTGTTTGAAGCAAAAGTAAT+TGG | - | chr8.2:32224230-32224249 | None:intergenic | 30.0% |
!!! | AACTCCAAATCTTTTTTGCA+AGG | + | chr8.2:32223952-32223971 | MS.gene93021:intron | 30.0% |
!!! | AATTTGTTTTAACTGGAAGC+TGG | + | chr8.2:32223015-32223034 | MS.gene93021:intron | 30.0% |
!!! | GTCAATTTTTTTTCTCCCAA+AGG | - | chr8.2:32222848-32222867 | None:intergenic | 30.0% |
!!! | GTCGACTTATTTTAATGCTT+TGG | + | chr8.2:32223199-32223218 | MS.gene93021:intron | 30.0% |
AACAAGATCATGCCTAAGAT+TGG | - | chr8.2:32224505-32224524 | None:intergenic | 35.0% | |
ACAACTGGCTACACATAATT+AGG | - | chr8.2:32224646-32224665 | None:intergenic | 35.0% | |
ACAAGATCATGCCTAAGATT+GGG | - | chr8.2:32224504-32224523 | None:intergenic | 35.0% | |
AGATGAGATAAAGTGAACTG+GGG | + | chr8.2:32223357-32223376 | MS.gene93021:intron | 35.0% | |
ATACAAACACTCACACAAAG+TGG | - | chr8.2:32224758-32224777 | None:intergenic | 35.0% | |
ATCAGTCAACAGAGAACAAA+TGG | - | chr8.2:32225322-32225341 | None:intergenic | 35.0% | |
ATTCACCACAACATTGATAG+CGG | - | chr8.2:32223114-32223133 | None:intergenic | 35.0% | |
CAACTGGCTACACATAATTA+GGG | - | chr8.2:32224645-32224664 | None:intergenic | 35.0% | |
CACACAAAGTGGAATTATGA+AGG | - | chr8.2:32224747-32224766 | None:intergenic | 35.0% | |
CACCCTAATATCAACAGTAA+CGG | + | chr8.2:32224826-32224845 | MS.gene93021:CDS | 35.0% | |
CATTGGCAAGCTACAATTAT+GGG | + | chr8.2:32223640-32223659 | MS.gene93021:CDS | 35.0% | |
CTACCGTTACTGTTGATATT+AGG | - | chr8.2:32224832-32224851 | None:intergenic | 35.0% | |
CTGTCCTTGCAAAAAAGATT+TGG | - | chr8.2:32223959-32223978 | None:intergenic | 35.0% | |
CTTGTATGCATATTCACCTT+TGG | + | chr8.2:32222829-32222848 | MS.gene93021:intron | 35.0% | |
CTTTAGCCAGCATATAACAA+TGG | + | chr8.2:32223897-32223916 | MS.gene93021:intron | 35.0% | |
GAATCAAACATAACACATGG+TGG | - | chr8.2:32224360-32224379 | None:intergenic | 35.0% | |
GCATCTCTATAATGAACAAC+TGG | - | chr8.2:32224661-32224680 | None:intergenic | 35.0% | |
GGATGTCATCTTATGACATA+TGG | + | chr8.2:32224142-32224161 | MS.gene93021:intron | 35.0% | |
TATAAAGCATGTGACAGACA+CGG | - | chr8.2:32222480-32222499 | None:intergenic | 35.0% | |
TGGACAAGTGATTAAGTGAA+TGG | + | chr8.2:32225224-32225243 | MS.gene93021:intron | 35.0% | |
TGTTGTGGTGAATCTTTAGT+TGG | + | chr8.2:32223121-32223140 | MS.gene93021:intron | 35.0% | |
TTAACCCATGGCATATTTCT+GGG | - | chr8.2:32225433-32225452 | None:intergenic | 35.0% | |
!! | TACTTCTAGTTCTAGCAGAA+GGG | - | chr8.2:32223394-32223413 | None:intergenic | 35.0% |
!! | TTACTTCTAGTTCTAGCAGA+AGG | - | chr8.2:32223395-32223414 | None:intergenic | 35.0% |
!! | TTTTAACTGGAAGCTGGATT+AGG | + | chr8.2:32223021-32223040 | MS.gene93021:intron | 35.0% |
!!! | TCCCCTTTTGTTGGTAATAT+TGG | + | chr8.2:32224547-32224566 | MS.gene93021:intron | 35.0% |
ACATGTTGGGCTATATGTCT+AGG | + | chr8.2:32223784-32223803 | MS.gene93021:intron | 40.0% | |
AGATCACCTTGGATATTGTG+AGG | - | chr8.2:32224894-32224913 | None:intergenic | 40.0% | |
AGGATCTTACGATCCTTGTT+AGG | + | chr8.2:32224462-32224481 | MS.gene93021:intron | 40.0% | |
ATAAAGCATGTGACAGACAC+GGG | - | chr8.2:32222479-32222498 | None:intergenic | 40.0% | |
ATTGCTCTTTCAGGATGTCA+AGG | - | chr8.2:32224861-32224880 | None:intergenic | 40.0% | |
CCATTGGCAAGCTACAATTA+TGG | + | chr8.2:32223639-32223658 | MS.gene93021:CDS | 40.0% | |
CGTTACTGTTGATATTAGGG+TGG | - | chr8.2:32224828-32224847 | None:intergenic | 40.0% | |
GACATATGTCACGTGCTTTA+GGG | + | chr8.2:32222594-32222613 | MS.gene93021:intron | 40.0% | |
GAGTGACAAAGCTAAGTATG+AGG | + | chr8.2:32225389-32225408 | MS.gene93021:CDS | 40.0% | |
GATCACCTTGGATATTGTGA+GGG | - | chr8.2:32224893-32224912 | None:intergenic | 40.0% | |
GATGAGATAAAGTGAACTGG+GGG | + | chr8.2:32223358-32223377 | MS.gene93021:intron | 40.0% | |
GCGGATCAATAAGGAATTGA+AGG | + | chr8.2:32222362-32222381 | MS.gene93021:CDS | 40.0% | |
GGGATAGCAAAATCCTAACA+AGG | - | chr8.2:32224478-32224497 | None:intergenic | 40.0% | |
GGTGGTTTGAAAGGATAATC+CGG | - | chr8.2:32223721-32223740 | None:intergenic | 40.0% | |
GTTTGAAAGGATAATCCGGA+GGG | - | chr8.2:32223717-32223736 | None:intergenic | 40.0% | |
TACGCACCCCTATATGTATA+TGG | + | chr8.2:32222792-32222811 | MS.gene93021:intron | 40.0% | |
TCACCATTCTACACAAGTAG+TGG | + | chr8.2:32224118-32224137 | MS.gene93021:intron | 40.0% | |
TCGCTGATGATATGTTCCAT+TGG | + | chr8.2:32223623-32223642 | MS.gene93021:CDS | 40.0% | |
TTATCCTTTCAAACCACCCA+AGG | + | chr8.2:32223723-32223742 | MS.gene93021:CDS | 40.0% | |
TTCCTTATTGATCCGCTTTG+AGG | - | chr8.2:32222358-32222377 | None:intergenic | 40.0% | |
TTGACATCCTGAAAGAGCAA+TGG | + | chr8.2:32224860-32224879 | MS.gene93021:CDS | 40.0% | |
TTTACCTTGGGTGGTTTGAA+AGG | - | chr8.2:32223730-32223749 | None:intergenic | 40.0% | |
! | AGCAGAATTTGGGTTTACCT+TGG | - | chr8.2:32223743-32223762 | None:intergenic | 40.0% |
! | CCATAATTGTAGCTTGCCAA+TGG | - | chr8.2:32223642-32223661 | None:intergenic | 40.0% |
! | GCAGAATTTGGGTTTACCTT+GGG | - | chr8.2:32223742-32223761 | None:intergenic | 40.0% |
! | TGTTTTGCTTCCCCTTTTGT+TGG | + | chr8.2:32224538-32224557 | MS.gene93021:intron | 40.0% |
!! | GTGGTGGATTGAATCAGATT+GGG | - | chr8.2:32224623-32224642 | None:intergenic | 40.0% |
!! | TGGTGGATTGAATCAGATTG+GGG | - | chr8.2:32224622-32224641 | None:intergenic | 40.0% |
ATCATGCCTAAGATTGGGAG+AGG | - | chr8.2:32224499-32224518 | None:intergenic | 45.0% | |
ATGCTCCGCTATCAATGTTG+TGG | + | chr8.2:32223106-32223125 | MS.gene93021:intron | 45.0% | |
ATGGACCCAGAAATATGCCA+TGG | + | chr8.2:32225425-32225444 | MS.gene93021:CDS | 45.0% | |
CCACCACTACTTGTGTAGAA+TGG | - | chr8.2:32224124-32224143 | None:intergenic | 45.0% | |
CCATTCTACACAAGTAGTGG+TGG | + | chr8.2:32224121-32224140 | MS.gene93021:intron | 45.0% | |
CGACATATGTCACGTGCTTT+AGG | + | chr8.2:32222593-32222612 | MS.gene93021:intron | 45.0% | |
CTGGCTACACATAATTAGGG+TGG | - | chr8.2:32224642-32224661 | None:intergenic | 45.0% | |
GATCAGAATGGGTAGCAAGA+TGG | - | chr8.2:32224424-32224443 | None:intergenic | 45.0% | |
GCTACACATAATTAGGGTGG+TGG | - | chr8.2:32224639-32224658 | None:intergenic | 45.0% | |
GGAACATATCATCAGCGACA+GGG | - | chr8.2:32223621-32223640 | None:intergenic | 45.0% | |
GGAATTGAAGGACTTGCAGA+AGG | + | chr8.2:32222374-32222393 | MS.gene93021:CDS | 45.0% | |
GGTTTGAAAGGATAATCCGG+AGG | - | chr8.2:32223718-32223737 | None:intergenic | 45.0% | |
TAGGGTGGAAAACCTTTGTG+CGG | - | chr8.2:32224813-32224832 | None:intergenic | 45.0% | |
TCAGGTTTCATTCCGCACAA+AGG | + | chr8.2:32224798-32224817 | MS.gene93021:intron | 45.0% | |
TCATGCCTAAGATTGGGAGA+GGG | - | chr8.2:32224498-32224517 | None:intergenic | 45.0% | |
TGGAACATATCATCAGCGAC+AGG | - | chr8.2:32223622-32223641 | None:intergenic | 45.0% | |
TGGACCCAGAAATATGCCAT+GGG | + | chr8.2:32225426-32225445 | MS.gene93021:CDS | 45.0% | |
TGTGCAAATTCACTTCCCTC+CGG | + | chr8.2:32223699-32223718 | MS.gene93021:CDS | 45.0% | |
TTCAAATACACTGGGAGCGA+TGG | + | chr8.2:32224199-32224218 | MS.gene93021:intron | 45.0% | |
! | GAATTTGGGTTTACCTTGGG+TGG | - | chr8.2:32223739-32223758 | None:intergenic | 45.0% |
!! | ATGTCACGTGCTTTAGGGTT+TGG | + | chr8.2:32222599-32222618 | MS.gene93021:intron | 45.0% |
!! | GGTGGTGGATTGAATCAGAT+TGG | - | chr8.2:32224624-32224643 | None:intergenic | 45.0% |
!! | TGTCACGTGCTTTAGGGTTT+GGG | + | chr8.2:32222600-32222619 | MS.gene93021:intron | 45.0% |
ACCAGAGGATCATCTGGGTT+GGG | - | chr8.2:32225345-32225364 | None:intergenic | 50.0% | |
ACCTTGGATATTGTGAGGGC+AGG | - | chr8.2:32224889-32224908 | None:intergenic | 50.0% | |
AGAAACACACCTCCCGCAAA+TGG | - | chr8.2:32223679-32223698 | None:intergenic | 50.0% | |
ATAAAGTGAACTGGGGGCCT+GGG | + | chr8.2:32223364-32223383 | MS.gene93021:intron | 50.0% | |
ATACCAGCACTGCAAGAAGC+AGG | - | chr8.2:32222405-32222424 | None:intergenic | 50.0% | |
CAAGCTACAATTATGGGCCC+AGG | + | chr8.2:32223646-32223665 | MS.gene93021:CDS | 50.0% | |
CCTTGGATATTGTGAGGGCA+GGG | - | chr8.2:32224888-32224907 | None:intergenic | 50.0% | |
CTAAGTATGAGGCCACTGCT+CGG | + | chr8.2:32225400-32225419 | MS.gene93021:CDS | 50.0% | |
GAAACACACCTCCCGCAAAT+GGG | - | chr8.2:32223678-32223697 | None:intergenic | 50.0% | |
GCTATCCCTCTCCCAATCTT+AGG | + | chr8.2:32224490-32224509 | MS.gene93021:intron | 50.0% | |
GGCCTCAAAGCGGATCAATA+AGG | + | chr8.2:32222353-32222372 | MS.gene93021:CDS | 50.0% | |
TGAGCAATTTCAGGGACCAG+AGG | - | chr8.2:32225360-32225379 | None:intergenic | 50.0% | |
! | GGTTTGGGCATGGATTGTAG+AGG | + | chr8.2:32222615-32222634 | MS.gene93021:intron | 50.0% |
ACGGGAACACGCTTAATCCG+AGG | - | chr8.2:32222461-32222480 | None:intergenic | 55.0% | |
CAGGGACCAGAGGATCATCT+GGG | - | chr8.2:32225350-32225369 | None:intergenic | 55.0% | |
CAGGGCTCCATTGCTCTTTC+AGG | - | chr8.2:32224870-32224889 | None:intergenic | 55.0% | |
CCAGGAGATAGCCCATTTGC+GGG | + | chr8.2:32223664-32223683 | MS.gene93021:CDS | 55.0% | |
CCCAGGAGATAGCCCATTTG+CGG | + | chr8.2:32223663-32223682 | MS.gene93021:CDS | 55.0% | |
CCCTGCCCTCACAATATCCA+AGG | + | chr8.2:32224885-32224904 | MS.gene93021:CDS | 55.0% | |
GACCAGAGGATCATCTGGGT+TGG | - | chr8.2:32225346-32225365 | None:intergenic | 55.0% | |
GATAAAGTGAACTGGGGGCC+TGG | + | chr8.2:32223363-32223382 | MS.gene93021:intron | 55.0% | |
GTTGCGCTACTAGCAAGAGC+TGG | - | chr8.2:32224316-32224335 | None:intergenic | 55.0% | |
TAAAGTGAACTGGGGGCCTG+GGG | + | chr8.2:32223365-32223384 | MS.gene93021:intron | 55.0% | |
TCAGGGACCAGAGGATCATC+TGG | - | chr8.2:32225351-32225370 | None:intergenic | 55.0% | |
TCCCAACCCAGATGATCCTC+TGG | + | chr8.2:32225341-32225360 | MS.gene93021:CDS | 55.0% | |
TCTAGCAGAAGGGATTCCCC+AGG | - | chr8.2:32223384-32223403 | None:intergenic | 55.0% | |
!! | CCGCAAATGGGCTATCTCCT+GGG | - | chr8.2:32223666-32223685 | None:intergenic | 55.0% |
!! | CGTGCTTTAGGGTTTGGGCA+TGG | + | chr8.2:32222605-32222624 | MS.gene93021:intron | 55.0% |
ATGAGGCCACTGCTCGGTCA+TGG | + | chr8.2:32225406-32225425 | MS.gene93021:CDS | 60.0% | |
CCAGCACTGCAAGAAGCAGG+AGG | - | chr8.2:32222402-32222421 | None:intergenic | 60.0% | |
CCTCCTGCTTCTTGCAGTGC+TGG | + | chr8.2:32222399-32222418 | MS.gene93021:CDS | 60.0% | |
GGAGATAGCCCATTTGCGGG+AGG | + | chr8.2:32223667-32223686 | MS.gene93021:CDS | 60.0% | |
!! | CCCGCAAATGGGCTATCTCC+TGG | - | chr8.2:32223667-32223686 | None:intergenic | 60.0% |
CTGGGTCCATGACCGAGCAG+TGG | - | chr8.2:32225415-32225434 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 32222351 | 32225452 | 32222351 | ID=MS.gene93021 |
chr8.2 | mRNA | 32222351 | 32225452 | 32222351 | ID=MS.gene93021.t1;Parent=MS.gene93021 |
chr8.2 | exon | 32222351 | 32222420 | 32222351 | ID=MS.gene93021.t1.exon1;Parent=MS.gene93021.t1 |
chr8.2 | CDS | 32222351 | 32222420 | 32222351 | ID=cds.MS.gene93021.t1;Parent=MS.gene93021.t1 |
chr8.2 | exon | 32223617 | 32223744 | 32223617 | ID=MS.gene93021.t1.exon2;Parent=MS.gene93021.t1 |
chr8.2 | CDS | 32223617 | 32223744 | 32223617 | ID=cds.MS.gene93021.t1;Parent=MS.gene93021.t1 |
chr8.2 | exon | 32224802 | 32224906 | 32224802 | ID=MS.gene93021.t1.exon3;Parent=MS.gene93021.t1 |
chr8.2 | CDS | 32224802 | 32224906 | 32224802 | ID=cds.MS.gene93021.t1;Parent=MS.gene93021.t1 |
chr8.2 | exon | 32225309 | 32225452 | 32225309 | ID=MS.gene93021.t1.exon4;Parent=MS.gene93021.t1 |
chr8.2 | CDS | 32225309 | 32225452 | 32225309 | ID=cds.MS.gene93021.t1;Parent=MS.gene93021.t1 |
Gene Sequence |
Protein sequence |