AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056522


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056522.t1 MTR_8g071040 99.324 148 1 0 1 148 1 148 4.98e-109 306
MS.gene056522.t1 MTR_5g075580 93.243 148 10 0 1 148 1 148 1.58e-103 292
MS.gene056522.t1 MTR_3g062450 93.243 148 10 0 1 148 1 148 1.58e-103 292
MS.gene056522.t1 MTR_7g116940 92.568 148 11 0 1 148 1 148 2.06e-102 290
MS.gene056522.t1 MTR_1g021150 91.216 148 13 0 1 148 1 148 9.56e-102 288
MS.gene056522.t1 MTR_7g116940 88.387 155 11 1 1 148 1 155 2.28e-99 282
MS.gene056522.t1 MTR_4g073240 87.838 148 18 0 1 148 1 148 1.37e-98 280
MS.gene056522.t1 MTR_1g021150 91.270 126 11 0 23 148 31 156 3.51e-86 249
MS.gene056522.t1 MTR_5g075580 94.118 119 7 0 30 148 1 119 1.06e-83 241
MS.gene056522.t1 MTR_4g073240 89.076 119 13 0 30 148 1 119 1.07e-79 231
MS.gene056522.t1 MTR_7g116940 89.908 109 11 0 1 109 1 109 1.48e-68 203
MS.gene056522.t1 MTR_8g085690 51.034 145 71 0 2 146 23 167 2.60e-55 171
MS.gene056522.t1 MTR_4g073240 87.952 83 10 0 66 148 4 86 3.44e-52 160
MS.gene056522.t1 MTR_2g078010 49.655 145 73 0 4 148 8 152 7.28e-48 152
MS.gene056522.t1 MTR_8g468530 46.575 146 73 1 2 142 21 166 5.60e-45 145
MS.gene056522.t1 MTR_4g108080 46.575 146 73 1 2 142 5 150 8.00e-45 144
MS.gene056522.t1 MTR_2g078010 45.283 159 73 1 4 148 8 166 8.57e-44 142
MS.gene056522.t1 MTR_2g078010 48.905 137 70 0 4 140 8 144 1.03e-42 139
MS.gene056522.t1 MTR_3g098780 48.611 144 72 2 5 146 6 149 1.72e-42 139
MS.gene056522.t1 MTR_3g098780 48.611 144 72 2 5 146 30 173 3.95e-42 139
MS.gene056522.t1 MTR_3g110110 42.857 147 80 3 5 147 7 153 1.81e-35 120
MS.gene056522.t1 MTR_4g076200 43.750 128 72 0 4 131 35 162 1.23e-34 119
MS.gene056522.t1 MTR_4g108080 48.571 105 54 0 2 106 5 109 8.76e-34 115
MS.gene056522.t1 MTR_5g009020 42.424 132 75 1 4 135 35 165 3.42e-33 115
MS.gene056522.t1 MTR_4g076200 45.133 113 62 0 19 131 9 121 1.81e-32 112
MS.gene056522.t1 MTR_4g108080 47.706 109 52 1 39 142 42 150 1.08e-31 110
MS.gene056522.t1 MTR_1g095510 42.537 134 75 2 3 135 43 175 1.96e-31 111
MS.gene056522.t1 MTR_2g078010 48.515 101 52 0 4 104 8 108 2.99e-31 108
MS.gene056522.t1 MTR_1g095510 44.737 114 62 1 22 135 9 121 2.85e-30 107
MS.gene056522.t1 MTR_4g094872 36.842 152 89 3 1 145 4 155 3.58e-29 104
MS.gene056522.t1 MTR_1g095510 45.946 111 59 1 3 112 43 153 6.92e-29 104
MS.gene056522.t1 MTR_8g028920 34.459 148 94 3 1 146 1 147 1.66e-26 98.6
MS.gene056522.t1 MTR_5g016630 32.895 152 95 2 1 145 4 155 2.87e-26 97.4
MS.gene056522.t1 MTR_5g019480 35.766 137 83 3 5 139 36 169 4.11e-26 97.8
MS.gene056522.t1 MTR_5g019480 35.766 137 83 3 5 139 33 166 4.11e-26 97.4
MS.gene056522.t1 MTR_4g063490 33.333 135 76 2 15 135 18 152 1.30e-25 95.9
MS.gene056522.t1 MTR_5g019480 38.393 112 68 1 28 139 8 118 3.04e-25 94.0
MS.gene056522.t1 MTR_7g087590 34.266 143 94 0 4 146 13 155 5.22e-25 96.7
MS.gene056522.t1 MTR_8g098595 35.772 123 77 2 26 146 10 132 6.57e-25 94.0
MS.gene056522.t1 MTR_8g028920 37.736 106 64 2 43 146 3 108 4.84e-23 88.6
MS.gene056522.t1 MTR_4g106690 29.730 148 101 3 1 146 1 147 7.31e-23 89.4
MS.gene056522.t1 MTR_2g096690 31.944 144 84 2 15 144 18 161 8.32e-23 88.6
MS.gene056522.t1 MTR_2g096690 36.000 125 66 2 15 125 18 142 5.16e-22 86.7
MS.gene056522.t1 MTR_8g076490 40.777 103 59 2 1 102 15 116 1.25e-20 82.8
MS.gene056522.t1 MTR_5g021260 36.893 103 63 2 1 102 15 116 4.06e-18 76.3
MS.gene056522.t1 MTR_4g121960 33.333 117 72 3 2 114 11 125 2.20e-17 77.0
MS.gene056522.t1 MTR_8g023380 34.188 117 68 3 4 115 8 120 3.12e-17 75.9
MS.gene056522.t1 MTR_7g451800 35.246 122 69 3 4 115 38 159 3.48e-15 71.2
MS.gene056522.t1 MTR_7g047620 35.246 122 69 3 4 115 38 159 3.48e-15 71.2
MS.gene056522.t1 MTR_2g096690 35.354 99 50 2 15 99 18 116 4.60e-15 67.4
MS.gene056522.t1 MTR_7g047570 35.246 122 69 3 4 115 38 159 4.70e-15 70.9
MS.gene056522.t1 MTR_7g451770 35.246 122 69 3 4 115 38 159 4.70e-15 70.9
MS.gene056522.t1 MTR_1g028540 73.913 46 12 0 102 147 83 128 5.26e-15 67.4
MS.gene056522.t1 MTR_7g023760 30.081 123 76 3 3 115 90 212 3.28e-14 68.6
MS.gene056522.t1 MTR_0274s0030 30.894 123 75 3 3 115 113 235 6.43e-14 67.8
MS.gene056522.t1 MTR_2g013650 28.477 151 95 4 3 143 681 828 1.37e-13 67.4
MS.gene056522.t1 MTR_4g088835 29.333 150 93 4 4 143 672 818 2.18e-13 66.6
MS.gene056522.t1 MTR_4g020620 30.894 123 75 3 3 115 570 692 6.40e-13 65.5
MS.gene056522.t1 MTR_4g020620 30.894 123 75 3 3 115 628 750 6.40e-13 65.5
MS.gene056522.t1 MTR_4g086440 31.148 122 74 3 4 115 37 158 1.58e-12 63.5
MS.gene056522.t1 MTR_1g073600 26.606 109 66 2 33 140 25 120 2.27e-12 60.8
MS.gene056522.t1 MTR_1g112730 29.508 122 76 3 4 115 856 977 6.55e-12 62.4
MS.gene056522.t1 MTR_2g079270 29.268 123 77 3 3 115 306 428 7.83e-12 62.0
MS.gene056522.t1 MTR_1g092465 28.105 153 84 5 2 144 240 376 7.99e-12 62.0
MS.gene056522.t1 MTR_1g092460 27.642 123 79 3 3 115 176 298 9.91e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056522.t1 AT1G64230 91.892 148 12 0 1 148 1 148 7.51e-103 291
MS.gene056522.t1 AT1G64230 91.892 148 12 0 1 148 1 148 7.51e-103 291
MS.gene056522.t1 AT5G41700 91.892 148 12 0 1 148 1 148 1.16e-102 290
MS.gene056522.t1 AT5G41700 91.892 148 12 0 1 148 1 148 1.16e-102 290
MS.gene056522.t1 AT5G41700 91.892 148 12 0 1 148 1 148 1.16e-102 290
MS.gene056522.t1 AT5G53300 92.568 148 11 0 1 148 1 148 1.73e-102 290
MS.gene056522.t1 AT5G53300 92.568 148 11 0 1 148 1 148 1.73e-102 290
MS.gene056522.t1 AT5G53300 92.568 148 11 0 1 148 1 148 1.73e-102 290
MS.gene056522.t1 AT4G27960 91.892 148 12 0 1 148 1 148 3.41e-102 289
MS.gene056522.t1 AT4G27960 91.892 148 12 0 1 148 31 178 2.16e-101 288
MS.gene056522.t1 AT3G08690 90.541 148 14 0 1 148 1 148 3.95e-101 286
MS.gene056522.t1 AT3G08690 90.541 148 14 0 1 148 1 148 3.95e-101 286
MS.gene056522.t1 AT5G56150 88.514 148 17 0 1 148 1 148 1.76e-100 285
MS.gene056522.t1 AT5G41700 90.604 149 13 1 1 148 1 149 7.82e-100 283
MS.gene056522.t1 AT1G64230 85.987 157 13 1 1 148 1 157 1.97e-98 280
MS.gene056522.t1 AT2G16740 85.034 147 22 0 1 147 1 147 1.59e-95 272
MS.gene056522.t1 AT1G64230 71.053 190 13 1 1 148 1 190 5.96e-94 270
MS.gene056522.t1 AT1G64230 71.053 190 13 1 1 148 1 190 5.96e-94 270
MS.gene056522.t1 AT3G08700 78.523 149 31 1 1 148 1 149 8.69e-87 250
MS.gene056522.t1 AT3G08700 78.523 149 31 1 1 148 1 149 8.69e-87 250
MS.gene056522.t1 AT5G41700 90.385 104 10 0 1 104 1 104 3.36e-68 203
MS.gene056522.t1 AT5G53300 88.991 109 10 1 1 107 1 109 1.19e-67 200
MS.gene056522.t1 AT5G56150 88.350 103 12 0 1 103 1 103 6.87e-67 198
MS.gene056522.t1 AT3G13550 46.897 145 77 0 2 146 37 181 1.33e-52 165
MS.gene056522.t1 AT1G78870 50.345 145 72 0 4 148 8 152 3.40e-48 152
MS.gene056522.t1 AT1G16890 49.655 145 73 0 4 148 8 152 5.20e-48 152
MS.gene056522.t1 AT1G14400 47.260 146 72 1 2 142 5 150 3.10e-45 145
MS.gene056522.t1 AT1G14400 47.260 146 72 1 2 142 5 150 3.10e-45 145
MS.gene056522.t1 AT1G16890 47.403 154 72 1 4 148 8 161 3.30e-45 145
MS.gene056522.t1 AT5G62540 50.376 133 66 0 2 134 5 137 5.87e-45 144
MS.gene056522.t1 AT2G02760 46.575 146 73 1 2 142 5 150 6.88e-45 144
MS.gene056522.t1 AT2G02760 46.575 146 73 1 2 142 5 150 6.88e-45 144
MS.gene056522.t1 AT2G02760 46.575 146 73 1 2 142 5 150 6.88e-45 144
MS.gene056522.t1 AT2G02760 46.575 146 73 1 2 142 5 150 6.88e-45 144
MS.gene056522.t1 AT1G36340 46.897 145 76 1 2 146 9 152 1.22e-43 141
MS.gene056522.t1 AT1G36340 46.897 145 76 1 2 146 9 152 1.22e-43 141
MS.gene056522.t1 AT3G13550 50.000 114 57 0 2 115 37 150 2.88e-42 138
MS.gene056522.t1 AT1G16890 52.941 119 56 0 30 148 1 119 5.15e-42 136
MS.gene056522.t1 AT1G78870 52.941 119 56 0 30 148 1 119 1.17e-41 135
MS.gene056522.t1 AT1G78870 52.500 120 56 1 30 148 1 120 6.35e-40 130
MS.gene056522.t1 AT5G50870 45.833 144 76 2 5 146 6 149 1.38e-39 132
MS.gene056522.t1 AT5G50870 42.581 155 76 3 5 146 6 160 3.44e-36 124
MS.gene056522.t1 AT3G24515 43.949 157 75 3 3 146 8 164 4.44e-35 125
MS.gene056522.t1 AT2G32790 50.794 126 58 2 25 148 54 177 6.32e-34 117
MS.gene056522.t1 AT5G25760 40.136 147 84 3 5 147 7 153 6.80e-33 114
MS.gene056522.t1 AT5G25760 40.136 147 84 3 5 147 7 153 6.80e-33 114
MS.gene056522.t1 AT1G78870 48.571 105 54 0 4 108 8 112 2.91e-32 111
MS.gene056522.t1 AT3G24515 45.902 122 62 1 29 146 68 189 5.49e-32 118
MS.gene056522.t1 AT3G20060 42.424 132 75 1 4 135 39 169 6.05e-32 112
MS.gene056522.t1 AT1G50490 43.182 132 74 1 4 135 38 168 1.80e-31 111
MS.gene056522.t1 AT3G20060 44.737 114 62 1 22 135 12 124 5.35e-30 106
MS.gene056522.t1 AT2G46030 36.486 148 91 3 1 146 1 147 1.15e-28 104
MS.gene056522.t1 AT2G46030 36.486 148 91 3 1 146 1 147 1.15e-28 104
MS.gene056522.t1 AT2G46030 36.486 148 91 3 1 146 73 219 2.82e-28 105
MS.gene056522.t1 AT2G46030 39.024 123 73 2 26 146 28 150 9.60e-28 102
MS.gene056522.t1 AT2G46030 39.024 123 73 2 26 146 28 150 9.60e-28 102
MS.gene056522.t1 AT3G57870 34.211 152 93 2 1 145 5 156 3.22e-27 99.8
MS.gene056522.t1 AT5G41340 34.459 148 94 3 1 146 1 147 1.95e-26 98.6
MS.gene056522.t1 AT1G63800 35.135 148 93 3 1 146 1 147 2.15e-26 98.6
MS.gene056522.t1 AT1G63800 37.398 123 75 2 26 146 10 132 3.15e-26 97.4
MS.gene056522.t1 AT5G05080 35.664 143 92 0 4 146 13 155 3.48e-26 99.4
MS.gene056522.t1 AT5G05080 35.664 143 92 0 4 146 13 155 3.48e-26 99.4
MS.gene056522.t1 AT5G05080 35.664 143 92 0 4 146 13 155 3.48e-26 99.4
MS.gene056522.t1 AT5G05080 35.664 143 92 0 4 146 13 155 3.48e-26 99.4
MS.gene056522.t1 AT3G55380 34.815 135 74 2 15 135 19 153 8.67e-26 96.3
MS.gene056522.t1 AT4G36800 35.036 137 84 3 5 139 34 167 1.25e-25 96.3
MS.gene056522.t1 AT4G36800 35.036 137 84 3 5 139 34 167 1.25e-25 96.3
MS.gene056522.t1 AT5G59300 32.639 144 83 2 15 144 18 161 1.56e-23 90.5
MS.gene056522.t1 AT3G46460 31.944 144 84 2 15 144 18 161 2.56e-23 90.1
MS.gene056522.t1 AT2G18600 33.577 137 86 3 5 139 35 168 4.34e-23 89.7
MS.gene056522.t1 AT2G18600 33.577 137 86 3 5 139 35 168 4.34e-23 89.7
MS.gene056522.t1 AT5G41340 38.462 104 62 2 45 146 9 112 7.81e-23 88.2
MS.gene056522.t1 AT3G17000 36.752 117 68 3 2 114 12 126 2.03e-20 85.5
MS.gene056522.t1 AT1G75440 38.889 108 60 3 1 107 15 117 4.22e-19 79.0
MS.gene056522.t1 AT3G55380 27.811 169 74 3 15 135 19 187 1.13e-18 79.0
MS.gene056522.t1 AT1G17280 35.043 117 67 3 4 115 8 120 1.40e-18 79.3
MS.gene056522.t1 AT1G17280 35.043 117 67 3 4 115 8 120 1.40e-18 79.3
MS.gene056522.t1 AT1G17280 35.043 117 67 3 4 115 8 120 1.40e-18 79.3
MS.gene056522.t1 AT1G17280 35.043 117 67 3 4 115 8 120 1.40e-18 79.3
MS.gene056522.t1 AT1G17280 35.043 117 67 3 4 115 8 120 1.40e-18 79.3
MS.gene056522.t1 AT1G17280 35.043 117 67 3 4 115 8 120 1.40e-18 79.3
MS.gene056522.t1 AT1G17280 35.043 117 67 3 4 115 8 120 1.40e-18 79.3
MS.gene056522.t1 AT1G17280 35.043 117 67 3 4 115 8 120 1.40e-18 79.3
MS.gene056522.t1 AT1G45050 37.864 103 62 2 1 102 15 116 1.45e-18 77.4
MS.gene056522.t1 AT5G50430 35.043 117 67 3 4 115 8 120 1.70e-18 79.3
MS.gene056522.t1 AT5G50430 35.043 117 67 3 4 115 8 120 1.70e-18 79.3
MS.gene056522.t1 AT5G42990 38.835 103 61 2 1 102 15 116 1.73e-18 77.4
MS.gene056522.t1 AT4G36410 36.111 108 63 3 1 107 15 117 4.07e-18 76.3
MS.gene056522.t1 AT1G17280 32.520 123 68 3 4 115 8 126 2.62e-17 75.9
MS.gene056522.t1 AT3G46460 29.730 111 65 1 47 144 9 119 3.67e-16 70.5
MS.gene056522.t1 AT3G46460 29.730 111 65 1 47 144 9 119 3.67e-16 70.5
MS.gene056522.t1 AT3G15355 28.289 152 96 4 3 144 334 482 3.79e-12 63.2
MS.gene056522.t1 AT1G45050 34.831 89 56 2 1 88 15 102 5.18e-12 59.3
MS.gene056522.t1 AT5G50430 30.769 117 59 4 4 115 8 107 2.39e-11 59.7
MS.gene056522.t1 AT1G53025 26.000 150 98 4 4 143 274 420 4.19e-11 60.1
MS.gene056522.t1 AT1G53025 26.000 150 98 4 4 143 274 420 4.55e-11 60.1

Find 63 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGGCTCCATTGCTCTTTC+AGG 0.120840 8.3:-31760601 None:intergenic
CTACCGTTACTGTTGATATT+AGG 0.137672 8.3:-31760563 None:intergenic
CTTAACCCATGGCATATTTC+TGG 0.152621 8.3:-31761354 None:intergenic
CCATTGGCAAGCTACAATTA+TGG 0.267578 8.3:+31759423 MS.gene056522:CDS
CAGAAATATGCCATGGGTTA+AGG 0.286801 8.3:+31761355 MS.gene056522:CDS
TTGTACATATGAGCAATTTC+AGG 0.311190 8.3:-31761289 None:intergenic
CCCGCAAATGGGCTATCTCC+TGG 0.316820 8.3:-31759448 None:intergenic
TACCGTTACTGTTGATATTA+GGG 0.326660 8.3:-31760562 None:intergenic
CATTGGCAAGCTACAATTAT+GGG 0.330983 8.3:+31759424 MS.gene056522:CDS
CCTCCTGCTTCTTGCAGTGC+TGG 0.366048 8.3:+31757842 MS.gene056522:CDS
TTAACCCATGGCATATTTCT+GGG 0.371740 8.3:-31761353 None:intergenic
AGAAATATGCCATGGGTTAA+GGG 0.381920 8.3:+31761356 MS.gene056522:CDS
CCAGGAGATAGCCCATTTGC+GGG 0.390432 8.3:+31759448 MS.gene056522:CDS
TTCCTTATTGATCCGCTTTG+AGG 0.396653 8.3:-31757798 None:intergenic
AGAAACACACCTCCCGCAAA+TGG 0.400575 8.3:-31759460 None:intergenic
TCAGGGACCAGAGGATCATC+TGG 0.406568 8.3:-31761271 None:intergenic
ACCTTGGATATCGTGAGGGC+AGG 0.433234 8.3:-31760620 None:intergenic
GGCCTCAAAGCGGATCAATA+AGG 0.439633 8.3:+31757796 MS.gene056522:CDS
GAATTTGGGTTTACCTTGGG+TGG 0.439702 8.3:-31759520 None:intergenic
ATCAGTCAACAGAGAACAAA+TGG 0.443192 8.3:-31761242 None:intergenic
CCCAGGAGATAGCCCATTTG+CGG 0.455352 8.3:+31759447 MS.gene056522:CDS
GCGGATCAATAAGGAATTGA+AGG 0.460462 8.3:+31757805 MS.gene056522:CDS
CCGCAAATGGGCTATCTCCT+GGG 0.465958 8.3:-31759447 None:intergenic
TCCCAACCCAGATGATCCTC+TGG 0.480906 8.3:+31761264 MS.gene056522:CDS
ACCAGAGGATCATCTGGGTT+GGG 0.483549 8.3:-31761265 None:intergenic
TTTACCTTGGGTGGTTTGAA+AGG 0.493166 8.3:-31759511 None:intergenic
TGTACATATGAGCAATTTCA+GGG 0.503724 8.3:-31761288 None:intergenic
ATGAGGCCACTGCTCGGTCA+TGG 0.505125 8.3:+31761329 MS.gene056522:CDS
GAAACACACCTCCCGCAAAT+GGG 0.512424 8.3:-31759459 None:intergenic
TGTGCAAATTCACTTCCCTC+CGG 0.514742 8.3:+31759483 MS.gene056522:CDS
GGTGGTTTGAAAGGATAATC+CGG 0.519248 8.3:-31759502 None:intergenic
GACCAGAGGATCATCTGGGT+TGG 0.531915 8.3:-31761266 None:intergenic
CCTTGGATATCGTGAGGGCA+GGG 0.535450 8.3:-31760619 None:intergenic
ATACCAGCACTGCAAGAAGC+AGG 0.544134 8.3:-31757845 None:intergenic
CAAGCTACAATTATGGGCCC+AGG 0.551929 8.3:+31759430 MS.gene056522:CDS
GAGTGACAAAGCTAAGTATG+AGG 0.561393 8.3:+31761312 MS.gene056522:CDS
ATTGCTCTTTCAGGATGTCA+AGG 0.568753 8.3:-31760592 None:intergenic
TGGAACATATCATCAGCGAC+AGG 0.569142 8.3:-31759403 None:intergenic
CTAAGTATGAGGCCACTGCT+CGG 0.591968 8.3:+31761323 MS.gene056522:CDS
ATGGACCCAGAAATATGCCA+TGG 0.598403 8.3:+31761348 MS.gene056522:CDS
CTTGGCCATCCCTTAACCCA+TGG 0.604057 8.3:-31761365 None:intergenic
CAGGGACCAGAGGATCATCT+GGG 0.604692 8.3:-31761270 None:intergenic
CACCCTAATATCAACAGTAA+CGG 0.606586 8.3:+31760560 MS.gene056522:CDS
GGAATTGAAGGACTTGCAGA+AGG 0.606883 8.3:+31757817 MS.gene056522:CDS
TTGACATCCTGAAAGAGCAA+TGG 0.608625 8.3:+31760594 MS.gene056522:CDS
CCATAATTGTAGCTTGCCAA+TGG 0.608901 8.3:-31759423 None:intergenic
TTATCCTTTCAAACCACCCA+AGG 0.609431 8.3:+31759507 MS.gene056522:CDS
TCGCTGATGATATGTTCCAT+TGG 0.614388 8.3:+31759407 MS.gene056522:CDS
CCCTGCCCTCACGATATCCA+AGG 0.624276 8.3:+31760619 MS.gene056522:CDS
CGTTACTGTTGATATTAGGG+TGG 0.631865 8.3:-31760559 None:intergenic
AGATCACCTTGGATATCGTG+AGG 0.633147 8.3:-31760625 None:intergenic
CTGGGTCCATGACCGAGCAG+TGG 0.634278 8.3:-31761335 None:intergenic
TCAGGTTTCATTCCGCACAA+AGG 0.634356 8.3:+31760532 MS.gene056522:intron
GGAACATATCATCAGCGACA+GGG 0.652409 8.3:-31759402 None:intergenic
TAGGGTGGAAAACCTTTGTG+CGG 0.653142 8.3:-31760544 None:intergenic
TGGACCCAGAAATATGCCAT+GGG 0.659562 8.3:+31761349 MS.gene056522:CDS
TGAGCAATTTCAGGGACCAG+AGG 0.676101 8.3:-31761280 None:intergenic
CCAGCACTGCAAGAAGCAGG+AGG 0.681403 8.3:-31757842 None:intergenic
GATCACCTTGGATATCGTGA+GGG 0.686476 8.3:-31760624 None:intergenic
GTTTGAAAGGATAATCCGGA+GGG 0.687186 8.3:-31759498 None:intergenic
GGAGATAGCCCATTTGCGGG+AGG 0.688783 8.3:+31759451 MS.gene056522:CDS
GGTTTGAAAGGATAATCCGG+AGG 0.710430 8.3:-31759499 None:intergenic
TTACCGAGATGGCCTCAAAG+CGG 0.762010 8.3:+31757786 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAACAG+AGG - chr8.3:31757965-31757984 None:intergenic 10.0%
!! AAAAAAAAAAAAAAAACAGA+GGG - chr8.3:31757964-31757983 None:intergenic 10.0%
!! TTAATGAAATTAAATAATGA+TGG + chr8.3:31758116-31758135 MS.gene056522:intron 10.0%
!! AAATTAAATATCAATTGTAG+TGG + chr8.3:31759799-31759818 MS.gene056522:intron 15.0%
!! ACAAAGAATCAAAAAATAAT+CGG - chr8.3:31760256-31760275 None:intergenic 15.0%
!! CAAGTTAAAATAAATTTCAT+AGG - chr8.3:31758480-31758499 None:intergenic 15.0%
!! TAAATAATGATGGTTTATAT+TGG + chr8.3:31758126-31758145 MS.gene056522:intron 15.0%
!! TGTGAATTTAATGATAAATA+AGG + chr8.3:31760868-31760887 MS.gene056522:intron 15.0%
!! TTAAATAAGTAGAGTTAAAA+TGG + chr8.3:31758911-31758930 MS.gene056522:intron 15.0%
!!! AAATTTGTACTCTTTTTATT+GGG + chr8.3:31758551-31758570 MS.gene056522:intron 15.0%
!!! CACTTTTTTAAAATTATGAT+AGG + chr8.3:31758602-31758621 MS.gene056522:intron 15.0%
!!! CATTATTTAATTTCATTAAG+TGG - chr8.3:31758115-31758134 None:intergenic 15.0%
!!! TGAAAACTTAATATTGATTT+TGG + chr8.3:31758324-31758343 MS.gene056522:intron 15.0%
!!! TTAAATTGTGATTTTTACAA+CGG - chr8.3:31759859-31759878 None:intergenic 15.0%
!! AAAAGATACAAATCCTAATT+CGG - chr8.3:31758506-31758525 None:intergenic 20.0%
!! AAGCAAAAATAATTGGAAAT+TGG - chr8.3:31759961-31759980 None:intergenic 20.0%
!! ACAACTACTTTAATAGTTTA+TGG - chr8.3:31760830-31760849 None:intergenic 20.0%
!! CCATTAACTACTATTAATAT+GGG - chr8.3:31761033-31761052 None:intergenic 20.0%
!! TATGAACGAAAACTTAAAAT+TGG + chr8.3:31758415-31758434 MS.gene056522:intron 20.0%
!! TCCATTAACTACTATTAATA+TGG - chr8.3:31761034-31761053 None:intergenic 20.0%
!!! AATGACTTATTTTATTGCTT+TGG + chr8.3:31759117-31759136 MS.gene056522:intron 20.0%
!!! ACTAAATAAGAGTATATTAG+TGG + chr8.3:31761076-31761095 MS.gene056522:intron 20.0%
!!! CAAATTTGTACTCTTTTTAT+TGG + chr8.3:31758550-31758569 MS.gene056522:intron 20.0%
!!! GTATTTGAAGCAAAAATAAT+TGG - chr8.3:31759968-31759987 None:intergenic 20.0%
!!! TCTAAAATGACAAATTATAC+TGG + chr8.3:31761127-31761146 MS.gene056522:intron 20.0%
!!! TTCAAATGGTTATTTTTACA+GGG + chr8.3:31758877-31758896 MS.gene056522:intron 20.0%
!!! TTTTGTTTAAGTGAATGTTT+GGG + chr8.3:31758360-31758379 MS.gene056522:intron 20.0%
!!! TTTTTGTTTAAGTGAATGTT+TGG + chr8.3:31758359-31758378 MS.gene056522:intron 20.0%
! AAAAGACACTTAATATGAGA+TGG - chr8.3:31760662-31760681 None:intergenic 25.0%
! AAAATTTGCAAACACCAAAA+TGG - chr8.3:31758798-31758817 None:intergenic 25.0%
! AAACATCAAAAGAAAAGGAA+CGG + chr8.3:31760960-31760979 MS.gene056522:intron 25.0%
! AAACATCAAAAGAAAAGGAA+TGG - chr8.3:31760979-31760960 None:intergenic 25.0%
! AAACTTCAATCATTTCATGT+GGG - chr8.3:31759163-31759182 None:intergenic 25.0%
! AATCAAACATAATACATGGT+GGG - chr8.3:31760109-31760128 None:intergenic 25.0%
! AGCTAAAACATCAAAAGAAA+AGG + chr8.3:31760955-31760974 MS.gene056522:intron 25.0%
! ATATGTGTTTGATAGATCAA+GGG - chr8.3:31757880-31757899 None:intergenic 25.0%
! ATTTGCATAAAGCAGAATTT+GGG - chr8.3:31759537-31759556 None:intergenic 25.0%
! CCCATATTAATAGTAGTTAA+TGG + chr8.3:31761030-31761049 MS.gene056522:intron 25.0%
! TAAACTTCAATCATTTCATG+TGG - chr8.3:31759164-31759183 None:intergenic 25.0%
! TATATGTGTTTGATAGATCA+AGG - chr8.3:31757881-31757900 None:intergenic 25.0%
! TATCAAACACATATATTCCT+CGG + chr8.3:31757886-31757905 MS.gene056522:intron 25.0%
! TCAAAAGAGAATGATTAAAG+AGG - chr8.3:31759310-31759329 None:intergenic 25.0%
! TCAGAATCAAACATAATACA+TGG - chr8.3:31760113-31760132 None:intergenic 25.0%
! TCAGTCAGTATAATAATTCT+TGG + chr8.3:31759361-31759380 MS.gene056522:intron 25.0%
! TGATTTCCATTGTTATATGT+TGG - chr8.3:31759686-31759705 None:intergenic 25.0%
!! ATTTTTGCTTCAAATACACT+GGG + chr8.3:31759971-31759990 MS.gene056522:intron 25.0%
!! CTGAAATATTAGAATTTTGC+AGG + chr8.3:31761210-31761229 MS.gene056522:intron 25.0%
!! TGCAAATTTTATGAAATGAG+CGG + chr8.3:31758808-31758827 MS.gene056522:intron 25.0%
!! TTGTTTGAATTTTCTTGTCA+GGG + chr8.3:31761184-31761203 MS.gene056522:intron 25.0%
!! TTTGTTTGAATTTTCTTGTC+AGG + chr8.3:31761183-31761202 MS.gene056522:intron 25.0%
!! TTTTCGTTCATAATCACTTT+TGG - chr8.3:31758407-31758426 None:intergenic 25.0%
!!! AAGTGAATGGAATAGTTTTT+TGG + chr8.3:31761160-31761179 MS.gene056522:intron 25.0%
!!! AGCGGCATTTTTATTTATTT+TGG + chr8.3:31758826-31758845 MS.gene056522:intron 25.0%
!!! CTCTAAAACATCAAAAGAAA+AGG - chr8.3:31760734-31760753 None:intergenic 25.0%
!!! CTTCAAATGGTTATTTTTAC+AGG + chr8.3:31758876-31758895 MS.gene056522:intron 25.0%
!!! GGCATTTTTATTTATTTTGG+CGG + chr8.3:31758829-31758848 MS.gene056522:intron 25.0%
!!! GTTTTTGAAGCAAAAGTAAT+TGG - chr8.3:31760010-31760029 None:intergenic 25.0%
!!! TATTGATTTTGGAATGTTTG+AGG + chr8.3:31758335-31758354 MS.gene056522:intron 25.0%
!!! TATTTTTGCTTCAAATACAC+TGG + chr8.3:31759970-31759989 MS.gene056522:intron 25.0%
!!! TCAAATGGTTATTTTTACAG+GGG + chr8.3:31758878-31758897 MS.gene056522:intron 25.0%
!!! TTGTATGCATATTCACTTTT+GGG + chr8.3:31758284-31758303 MS.gene056522:intron 25.0%
AAAAGTAATTGGAAATGCCA+TGG - chr8.3:31759999-31760018 None:intergenic 30.0%
AAGACTAAGATAAAGTGAAC+TGG + chr8.3:31759185-31759204 MS.gene056522:intron 30.0%
AATCATTTCATGTGGGAAAT+AGG - chr8.3:31759156-31759175 None:intergenic 30.0%
AATGGAAATCAATATCGTGA+TGG + chr8.3:31759695-31759714 MS.gene056522:intron 30.0%
ACACACATCCATATACATAT+AGG - chr8.3:31758258-31758277 None:intergenic 30.0%
ACACATCCATATACATATAG+GGG - chr8.3:31758256-31758275 None:intergenic 30.0%
ACAGAGGGAATAATAAATCA+AGG - chr8.3:31757949-31757968 None:intergenic 30.0%
ACATGTTAAGCTATATGTCT+AGG + chr8.3:31759568-31759587 MS.gene056522:intron 30.0%
ACTTCATCATCAATATGTTC+AGG + chr8.3:31760514-31760533 MS.gene056522:intron 30.0%
AGACTAAGATAAAGTGAACT+GGG + chr8.3:31759186-31759205 MS.gene056522:intron 30.0%
ATAGTGTATTAAGATCACCT+TGG - chr8.3:31760639-31760658 None:intergenic 30.0%
ATCAAAAGAAAAGGAATGGA+GGG - chr8.3:31760725-31760744 None:intergenic 30.0%
ATTAAAGTAGTTGTGACCTT+TGG + chr8.3:31760836-31760855 MS.gene056522:intron 30.0%
ATTCAACACAACATTGATAG+CGG - chr8.3:31758949-31758968 None:intergenic 30.0%
ATTCACATGTGATAAACCAA+AGG - chr8.3:31760855-31760874 None:intergenic 30.0%
ATTGTTAAGTTTACCCTTGT+TGG + chr8.3:31760798-31760817 MS.gene056522:intron 30.0%
CACACATCCATATACATATA+GGG - chr8.3:31758257-31758276 None:intergenic 30.0%
CACTAAAACATCAAAAGTTC+TGG - chr8.3:31760770-31760789 None:intergenic 30.0%
CATTTGCATAAAGCAGAATT+TGG - chr8.3:31759538-31759557 None:intergenic 30.0%
CTTTAGCCAACATATAACAA+TGG + chr8.3:31759677-31759696 MS.gene056522:intron 30.0%
GAATCAAACATAATACATGG+TGG - chr8.3:31760110-31760129 None:intergenic 30.0%
GTAATGAAACACACTTCAAA+TGG + chr8.3:31758863-31758882 MS.gene056522:intron 30.0%
TACCGTTACTGTTGATATTA+GGG - chr8.3:31760565-31760584 None:intergenic 30.0%
TAGTAGTTAATGGAGTCATT+CGG + chr8.3:31761040-31761059 MS.gene056522:intron 30.0%
TCCCAATATTACCAACAAAA+GGG - chr8.3:31760292-31760311 None:intergenic 30.0%
TGTACATATGAGCAATTTCA+GGG - chr8.3:31761291-31761310 None:intergenic 30.0%
TTGTACATATGAGCAATTTC+AGG - chr8.3:31761292-31761311 None:intergenic 30.0%
! CTTGTATGCATATTCACTTT+TGG + chr8.3:31758283-31758302 MS.gene056522:intron 30.0%
! TTTAAGTGAATGTTTGGGTT+GGG + chr8.3:31758365-31758384 MS.gene056522:intron 30.0%
! TTTATGGTGTTTTCCAACAA+GGG - chr8.3:31760814-31760833 None:intergenic 30.0%
!!! AACTCCAAATCTTTTTTGCA+AGG + chr8.3:31759732-31759751 MS.gene056522:intron 30.0%
!!! CAAATGGTTATTTTTACAGG+GGG + chr8.3:31758879-31758898 MS.gene056522:intron 30.0%
!!! CTTGGTTTTAATTTTTGTGC+AGG + chr8.3:31759379-31759398 MS.gene056522:intron 30.0%
!!! TTTTAACTTGAAGCCGAATT+AGG + chr8.3:31758490-31758509 MS.gene056522:intron 30.0%
AACACAACGCTAGTAAGAAT+AGG + chr8.3:31759283-31759302 MS.gene056522:intron 35.0%
ACAAACATCAAGAGCGAAAA+TGG + chr8.3:31758726-31758745 MS.gene056522:intron 35.0%
ACAGCTAGCTACACATAATT+AGG - chr8.3:31760387-31760406 None:intergenic 35.0%
AGGATCGTAAGATCATAACA+AGG - chr8.3:31760151-31760170 None:intergenic 35.0%
ATCAAAAGAAAAGGAACGGA+GGG + chr8.3:31760964-31760983 MS.gene056522:intron 35.0%
ATCAAGATCATGCCTAAGAT+TGG - chr8.3:31760198-31760217 None:intergenic 35.0%
ATCAGTCAACAGAGAACAAA+TGG - chr8.3:31761245-31761264 None:intergenic 35.0%
ATCCTGATACTACAAACATG+TGG - chr8.3:31759081-31759100 None:intergenic 35.0%
ATGATCTTACGATCCTTGTT+AGG + chr8.3:31760155-31760174 MS.gene056522:intron 35.0%
CACCCTAATATCAACAGTAA+CGG + chr8.3:31760560-31760579 MS.gene056522:CDS 35.0%
CAGCTAGCTACACATAATTA+GGG - chr8.3:31760386-31760405 None:intergenic 35.0%
CATCAAAAGAAAAGGAATGG+AGG - chr8.3:31760726-31760745 None:intergenic 35.0%
CATTGGCAAGCTACAATTAT+GGG + chr8.3:31759424-31759443 MS.gene056522:CDS 35.0%
CCAATATTACCAACAAAAGG+GGG - chr8.3:31760290-31760309 None:intergenic 35.0%
CCCAATATTACCAACAAAAG+GGG - chr8.3:31760291-31760310 None:intergenic 35.0%
CTACCGTTACTGTTGATATT+AGG - chr8.3:31760566-31760585 None:intergenic 35.0%
CTCCCAATATTACCAACAAA+AGG - chr8.3:31760293-31760312 None:intergenic 35.0%
CTGTCCTTGCAAAAAAGATT+TGG - chr8.3:31759739-31759758 None:intergenic 35.0%
GAGCATTAAAATAAGTCGAC+AGG - chr8.3:31759034-31759053 None:intergenic 35.0%
GGATCTTCTTTATGACATGT+GGG + chr8.3:31759922-31759941 MS.gene056522:intron 35.0%
GTTTAAGTGAATGTTTGGGT+TGG + chr8.3:31758364-31758383 MS.gene056522:intron 35.0%
TATCACAACTTGATACTGCA+AGG + chr8.3:31760317-31760336 MS.gene056522:intron 35.0%
TCAAGATCATGCCTAAGATT+GGG - chr8.3:31760197-31760216 None:intergenic 35.0%
TGGACAAGTGATTAAGTGAA+TGG + chr8.3:31761147-31761166 MS.gene056522:intron 35.0%
TTAACCCATGGCATATTTCT+GGG - chr8.3:31761356-31761375 None:intergenic 35.0%
TTCCACATGTTTGTAGTATC+AGG + chr8.3:31759076-31759095 MS.gene056522:intron 35.0%
TTTATTGGGTGATCAAGTTC+AGG + chr8.3:31758565-31758584 MS.gene056522:intron 35.0%
! AGCTCTTGACACAAGTTTTA+AGG - chr8.3:31760939-31760958 None:intergenic 35.0%
! GTTTATGGTGTTTTCCAACA+AGG - chr8.3:31760815-31760834 None:intergenic 35.0%
!!! CCCCTTTTGTTGGTAATATT+GGG + chr8.3:31760288-31760307 MS.gene056522:intron 35.0%
!!! GTCGACTTATTTTAATGCTC+TGG + chr8.3:31759034-31759053 MS.gene056522:intron 35.0%
AGGACCCATAACTGAAGTAT+GGG + chr8.3:31758622-31758641 MS.gene056522:intron 40.0%
AGTCATATACACACTCAGAG+TGG - chr8.3:31760497-31760516 None:intergenic 40.0%
ATAAAGTGAACTGGGTGCTT+GGG + chr8.3:31759194-31759213 MS.gene056522:intron 40.0%
ATTGCTCTTTCAGGATGTCA+AGG - chr8.3:31760595-31760614 None:intergenic 40.0%
ATTGGAAATTGGAGAAGCCA+CGG - chr8.3:31759950-31759969 None:intergenic 40.0%
CAAGGCTATAAAACACGTGT+CGG - chr8.3:31757931-31757950 None:intergenic 40.0%
CATCAAAAGAAAAGGAACGG+AGG + chr8.3:31760963-31760982 MS.gene056522:intron 40.0%
CATCCCCATACTTCAGTTAT+GGG - chr8.3:31758629-31758648 None:intergenic 40.0%
CCATTGGCAAGCTACAATTA+TGG + chr8.3:31759423-31759442 MS.gene056522:CDS 40.0%
CGGATCTTCTTTATGACATG+TGG + chr8.3:31759921-31759940 MS.gene056522:intron 40.0%
CGTTACTGTTGATATTAGGG+TGG - chr8.3:31760562-31760581 None:intergenic 40.0%
CTAGCTACACATAATTAGGG+TGG - chr8.3:31760383-31760402 None:intergenic 40.0%
GACATATGTCACGTGCTTTA+GGG + chr8.3:31758043-31758062 MS.gene056522:intron 40.0%
GAGTGACAAAGCTAAGTATG+AGG + chr8.3:31761312-31761331 MS.gene056522:CDS 40.0%
GCGGATCAATAAGGAATTGA+AGG + chr8.3:31757805-31757824 MS.gene056522:CDS 40.0%
GGGATAGCAAAATCCTAACA+AGG - chr8.3:31760171-31760190 None:intergenic 40.0%
GGTGGTTTGAAAGGATAATC+CGG - chr8.3:31759505-31759524 None:intergenic 40.0%
GTTTGAAAGGATAATCCGGA+GGG - chr8.3:31759501-31759520 None:intergenic 40.0%
TACGCACCCCTATATGTATA+TGG + chr8.3:31758247-31758266 MS.gene056522:intron 40.0%
TAGGACCCATAACTGAAGTA+TGG + chr8.3:31758621-31758640 MS.gene056522:intron 40.0%
TATAAAACACGTGTCGGACA+CGG - chr8.3:31757925-31757944 None:intergenic 40.0%
TCACCATTCTACACAAGTAG+TGG + chr8.3:31759898-31759917 MS.gene056522:intron 40.0%
TCGCTGATGATATGTTCCAT+TGG + chr8.3:31759407-31759426 MS.gene056522:CDS 40.0%
TTATCCTTTCAAACCACCCA+AGG + chr8.3:31759507-31759526 MS.gene056522:CDS 40.0%
TTCCTTATTGATCCGCTTTG+AGG - chr8.3:31757801-31757820 None:intergenic 40.0%
TTGACATCCTGAAAGAGCAA+TGG + chr8.3:31760594-31760613 MS.gene056522:CDS 40.0%
TTTACCTTGGGTGGTTTGAA+AGG - chr8.3:31759514-31759533 None:intergenic 40.0%
! AGCAGAATTTGGGTTTACCT+TGG - chr8.3:31759527-31759546 None:intergenic 40.0%
! CCATAATTGTAGCTTGCCAA+TGG - chr8.3:31759426-31759445 None:intergenic 40.0%
! GCAGAATTTGGGTTTACCTT+GGG - chr8.3:31759526-31759545 None:intergenic 40.0%
! TCACTTCTTTTACGTCAGCT+TGG + chr8.3:31759622-31759641 MS.gene056522:intron 40.0%
!! GGAGGGAGTACTAATTTCTA+TGG + chr8.3:31760981-31761000 MS.gene056522:intron 40.0%
!! TAGGGTGGATTGAATCAGAT+TGG - chr8.3:31760368-31760387 None:intergenic 40.0%
!!! CCCCCTTTTGTTGGTAATAT+TGG + chr8.3:31760287-31760306 MS.gene056522:intron 40.0%
AGATCACCTTGGATATCGTG+AGG - chr8.3:31760628-31760647 None:intergenic 45.0%
AGCTCTTGCTAGTAGCACAA+CGG + chr8.3:31760065-31760084 MS.gene056522:intron 45.0%
ATAAAACACGTGTCGGACAC+GGG - chr8.3:31757924-31757943 None:intergenic 45.0%
ATCATGCCTAAGATTGGGAG+AGG - chr8.3:31760192-31760211 None:intergenic 45.0%
ATGGACCCAGAAATATGCCA+TGG + chr8.3:31761348-31761367 MS.gene056522:CDS 45.0%
CCATTCTACACAAGTAGTGG+CGG + chr8.3:31759901-31759920 MS.gene056522:intron 45.0%
CGACATATGTCACGTGCTTT+AGG + chr8.3:31758042-31758061 MS.gene056522:intron 45.0%
GATAAAGTGAACTGGGTGCT+TGG + chr8.3:31759193-31759212 MS.gene056522:intron 45.0%
GATCACCTTGGATATCGTGA+GGG - chr8.3:31760627-31760646 None:intergenic 45.0%
GCATCCCCATACTTCAGTTA+TGG - chr8.3:31758630-31758649 None:intergenic 45.0%
GGAACATATCATCAGCGACA+GGG - chr8.3:31759405-31759424 None:intergenic 45.0%
GGAATTGAAGGACTTGCAGA+AGG + chr8.3:31757817-31757836 MS.gene056522:CDS 45.0%
GGACCCATAACTGAAGTATG+GGG + chr8.3:31758623-31758642 MS.gene056522:intron 45.0%
GGGTGATCAAGTTCAGGTAT+AGG + chr8.3:31758571-31758590 MS.gene056522:intron 45.0%
GGTTTGAAAGGATAATCCGG+AGG - chr8.3:31759502-31759521 None:intergenic 45.0%
TAAAGTGAACTGGGTGCTTG+GGG + chr8.3:31759195-31759214 MS.gene056522:intron 45.0%
TAGGGTGGAAAACCTTTGTG+CGG - chr8.3:31760547-31760566 None:intergenic 45.0%
TCAGGTTTCATTCCGCACAA+AGG + chr8.3:31760532-31760551 MS.gene056522:intron 45.0%
TCATGCCTAAGATTGGGAGA+GGG - chr8.3:31760191-31760210 None:intergenic 45.0%
TGGAACATATCATCAGCGAC+AGG - chr8.3:31759406-31759425 None:intergenic 45.0%
TGGACCCAGAAATATGCCAT+GGG + chr8.3:31761349-31761368 MS.gene056522:CDS 45.0%
TGTGCAAATTCACTTCCCTC+CGG + chr8.3:31759483-31759502 MS.gene056522:CDS 45.0%
TTCAAATACACTGGGTGCCA+TGG + chr8.3:31759979-31759998 MS.gene056522:intron 45.0%
! GAATTTGGGTTTACCTTGGG+TGG - chr8.3:31759523-31759542 None:intergenic 45.0%
! TGTTTTGCTCCCCCTTTTGT+TGG + chr8.3:31760278-31760297 MS.gene056522:intron 45.0%
!! ATGTCACGTGCTTTAGGGTT+TGG + chr8.3:31758048-31758067 MS.gene056522:intron 45.0%
!! TGTCACGTGCTTTAGGGTTT+GGG + chr8.3:31758049-31758068 MS.gene056522:intron 45.0%
!!! TTTGGGTTGGGCTCTCTTTT+GGG + chr8.3:31758377-31758396 MS.gene056522:intron 45.0%
ACCAGAGGATCATCTGGGTT+GGG - chr8.3:31761268-31761287 None:intergenic 50.0%
AGAAACACACCTCCCGCAAA+TGG - chr8.3:31759463-31759482 None:intergenic 50.0%
ATACCAGCACTGCAAGAAGC+AGG - chr8.3:31757848-31757867 None:intergenic 50.0%
CAAGCTACAATTATGGGCCC+AGG + chr8.3:31759430-31759449 MS.gene056522:CDS 50.0%
CCGCCACTACTTGTGTAGAA+TGG - chr8.3:31759904-31759923 None:intergenic 50.0%
CTAAGTATGAGGCCACTGCT+CGG + chr8.3:31761323-31761342 MS.gene056522:CDS 50.0%
CTGCAGTACGCTCGATTACA+AGG + chr8.3:31758751-31758770 MS.gene056522:intron 50.0%
CTTGTAATCGAGCGTACTGC+AGG - chr8.3:31758753-31758772 None:intergenic 50.0%
GAAACACACCTCCCGCAAAT+GGG - chr8.3:31759462-31759481 None:intergenic 50.0%
GCTATCCCTCTCCCAATCTT+AGG + chr8.3:31760183-31760202 MS.gene056522:intron 50.0%
GGCCTCAAAGCGGATCAATA+AGG + chr8.3:31757796-31757815 MS.gene056522:CDS 50.0%
TGAGCAATTTCAGGGACCAG+AGG - chr8.3:31761283-31761302 None:intergenic 50.0%
TTTATGACATGTGGGAGCCG+TGG + chr8.3:31759930-31759949 MS.gene056522:intron 50.0%
! GGTTTGGGCATGGATTGTAG+AGG + chr8.3:31758064-31758083 MS.gene056522:intron 50.0%
! GTTGTGCTACTAGCAAGAGC+TGG - chr8.3:31760066-31760085 None:intergenic 50.0%
!!! GTTTGGGTTGGGCTCTCTTT+TGG + chr8.3:31758376-31758395 MS.gene056522:intron 50.0%
AAGGCCTGGATCGTGAACTG+GGG + chr8.3:31758770-31758789 MS.gene056522:intron 55.0%
ACAAGGCCTGGATCGTGAAC+TGG + chr8.3:31758768-31758787 MS.gene056522:intron 55.0%
ACCTTGGATATCGTGAGGGC+AGG - chr8.3:31760623-31760642 None:intergenic 55.0%
ACGGGAACAGGCTTAATCCG+AGG - chr8.3:31757906-31757925 None:intergenic 55.0%
CAAGGCCTGGATCGTGAACT+GGG + chr8.3:31758769-31758788 MS.gene056522:intron 55.0%
CAGGGACCAGAGGATCATCT+GGG - chr8.3:31761273-31761292 None:intergenic 55.0%
CAGGGCTCCATTGCTCTTTC+AGG - chr8.3:31760604-31760623 None:intergenic 55.0%
CCAGGAGATAGCCCATTTGC+GGG + chr8.3:31759448-31759467 MS.gene056522:CDS 55.0%
CCCAGGAGATAGCCCATTTG+CGG + chr8.3:31759447-31759466 MS.gene056522:CDS 55.0%
CCTTGGATATCGTGAGGGCA+GGG - chr8.3:31760622-31760641 None:intergenic 55.0%
GACCAGAGGATCATCTGGGT+TGG - chr8.3:31761269-31761288 None:intergenic 55.0%
GTACGCTCGATTACAAGGCC+TGG + chr8.3:31758756-31758775 MS.gene056522:intron 55.0%
TCAGGGACCAGAGGATCATC+TGG - chr8.3:31761274-31761293 None:intergenic 55.0%
TCCCAACCCAGATGATCCTC+TGG + chr8.3:31761264-31761283 MS.gene056522:CDS 55.0%
! CGTGAACTGGGGCTCCATTT+TGG + chr8.3:31758781-31758800 MS.gene056522:intron 55.0%
!! CCGCAAATGGGCTATCTCCT+GGG - chr8.3:31759450-31759469 None:intergenic 55.0%
!! CGTGCTTTAGGGTTTGGGCA+TGG + chr8.3:31758054-31758073 MS.gene056522:intron 55.0%
ATGAGGCCACTGCTCGGTCA+TGG + chr8.3:31761329-31761348 MS.gene056522:CDS 60.0%
CCAGCACTGCAAGAAGCAGG+AGG - chr8.3:31757845-31757864 None:intergenic 60.0%
CCCTGCCCTCACGATATCCA+AGG + chr8.3:31760619-31760638 MS.gene056522:CDS 60.0%
CCTCCTGCTTCTTGCAGTGC+TGG + chr8.3:31757842-31757861 MS.gene056522:CDS 60.0%
GGAGATAGCCCATTTGCGGG+AGG + chr8.3:31759451-31759470 MS.gene056522:CDS 60.0%
!! CCCGCAAATGGGCTATCTCC+TGG - chr8.3:31759451-31759470 None:intergenic 60.0%
CACGTGTCGGACACGGGAAC+AGG - chr8.3:31757918-31757937 None:intergenic 65.0%
CTGGGTCCATGACCGAGCAG+TGG - chr8.3:31761338-31761357 None:intergenic 65.0%
GGAGCCCCAGTTCACGATCC+AGG - chr8.3:31758777-31758796 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 31757794 31761375 31757794 ID=MS.gene056522
chr8.3 mRNA 31757794 31761375 31757794 ID=MS.gene056522.t1;Parent=MS.gene056522
chr8.3 exon 31757794 31757863 31757794 ID=MS.gene056522.t1.exon1;Parent=MS.gene056522.t1
chr8.3 CDS 31757794 31757863 31757794 ID=cds.MS.gene056522.t1;Parent=MS.gene056522.t1
chr8.3 exon 31759401 31759528 31759401 ID=MS.gene056522.t1.exon2;Parent=MS.gene056522.t1
chr8.3 CDS 31759401 31759528 31759401 ID=cds.MS.gene056522.t1;Parent=MS.gene056522.t1
chr8.3 exon 31760536 31760640 31760536 ID=MS.gene056522.t1.exon3;Parent=MS.gene056522.t1
chr8.3 CDS 31760536 31760640 31760536 ID=cds.MS.gene056522.t1;Parent=MS.gene056522.t1
chr8.3 exon 31761232 31761375 31761232 ID=MS.gene056522.t1.exon4;Parent=MS.gene056522.t1
chr8.3 CDS 31761232 31761375 31761232 ID=cds.MS.gene056522.t1;Parent=MS.gene056522.t1
Gene Sequence

>MS.gene056522

ATGGCCTCAAAGCGGATCAATAAGGAATTGAAGGACTTGCAGAAGGATCCTCCTGCTTCTTGCAGTGCTGGTATTTTCTTTTACCCTTGATCTATCAAACACATATATTCCTCGGATTAAGCCTGTTCCCGTGTCCGACACGTGTTTTATAGCCTTGATTTATTATTCCCTCTGTTTTTTTTTTTTTTTTTTTTTTTTTACGTTGATTGATTTAAAATAAAATAAGTATGTAATTTTTATTGAGATGTCGACATATGTCACGTGCTTTAGGGTTTGGGCATGGATTGTAGAGGATTTAAGCAATAAAAATGATAGATACCACTTAATGAAATTAAATAATGATGGTTTATATTGGTTGTTGATGCTAGATTTTATTTTAATTTTTTTCTTTTGATATTAAAATTTTAACAAAGTTTTATGTGATTAGTTTAATATGTGTATTATGTACGATTGTACGCACCCCTATATGTATATGGATGTGTGTGTTGTCTTGTATGCATATTCACTTTTGGGAGAAAAAAAATTGTCTATGAAAACTTAATATTGATTTTGGAATGTTTGAGGTTTTTTGTTTAAGTGAATGTTTGGGTTGGGCTCTCTTTTGGGAGAACCAAAAGTGATTATGAACGAAAACTTAAAATTGGTTTTGATATGTTTGAAGTTCTTGATTAGAATTGATTTTGCCTATGAAATTTATTTTAACTTGAAGCCGAATTAGGATTTGTATCTTTTACTTCTGAACATGATTTTTATGCTCAAATTTGTACTCTTTTTATTGGGTGATCAAGTTCAGGTATAGGATATAGAACACTTTTTTAAAATTATGATAGGACCCATAACTGAAGTATGGGGATGCATGACATTTTTAAAAAAAATTAAGATACAATAATTCTTAAAAATAACGTAAAAGCAAAGCGACTTTGCAACACAGAACAAACATCAAGAGCGAAAATGGTCCTGCAGTACGCTCGATTACAAGGCCTGGATCGTGAACTGGGGCTCCATTTTGGTGTTTGCAAATTTTATGAAATGAGCGGCATTTTTATTTATTTTGGCGGAGATGTATGAAGTAATGAAACACACTTCAAATGGTTATTTTTACAGGGGGACATTTAAATTAAATAAGTAGAGTTAAAATGGTAAAAAAATGCTCCGCTATCAATGTTGTGTTGAATCTTTAGTTGTTAAAATTCGATACTTTCTGAATACTTATCTATTGAGATGTATCTCATGCATACCTGTCGACTTATTTTAATGCTCTGGAATTTTGTCTGTTTCTAGTTTCCACATGTTTGTAGTATCAGGATTTCATAGTTTTTCATGAATGACTTATTTTATTGCTTTGGAATTTTGTCTGTTCCTATTTCCCACATGAAATGATTGAAGTTTATAAGACTAAGATAAAGTGAACTGGGTGCTTGGGGAAATATATGTGTGTTACGCATTCAAATATGCAGTCGATTGTTTTTAATTTATGCTTACAAATAATAACACAACGCTAGTAAGAATAGGACCTCTTTAATCATTCTCTTTTGATTCATACTAGTCTTAACAACACTTCGACTGTTCAGTCAGTATAATAATTCTTGGTTTTAATTTTTGTGCAGGCCCTGTCGCTGATGATATGTTCCATTGGCAAGCTACAATTATGGGCCCAGGAGATAGCCCATTTGCGGGAGGTGTGTTTCTTGTGCAAATTCACTTCCCTCCGGATTATCCTTTCAAACCACCCAAGGTAAACCCAAATTCTGCTTTATGCAAATGTATAACTGACACATGTTAAGCTATATGTCTAGGTAGTAAGTACACTCTGCAAGAAGATCTTTCTTCACTTCTTTTACGTCAGCTTGGATATCTTTTGCGTTATCGTATTATAAATTTCACTTTAGCCAACATATAACAATGGAAATCAATATCGTGATGGATAGAAACTCTAGTAACTCCAAATCTTTTTTGCAAGGACAGATGTTGTATTGAATTTGATGAGCAATTTCATAAGCTTTTAAAATTAAATATCAATTGTAGTGGATTTGATATTTGTTGCGAACATGTGATATTATTGCCGTTGTAAAAATCACAATTTAAATCGCTCTATCGTGCAATTTCACCATTCTACACAAGTAGTGGCGGATCTTCTTTATGACATGTGGGAGCCGTGGCTTCTCCAATTTCCAATTATTTTTGCTTCAAATACACTGGGTGCCATGGCATTTCCAATTACTTTTGCTTCAAAAACACACACACACACACTGTTAATTTTGTATAAATACCAGCTCTTGCTAGTAGCACAACGGTTAGTTTGATGTTGTGCACCCACCATGTATTATGTTTGATTCTGATGTGTGTCATTCTATCCTTGTTATGATCTTACGATCCTTGTTAGGATTTTGCTATCCCTCTCCCAATCTTAGGCATGATCTTGATCTTCAGATATTATATATCTGATCTGAATTATTCATCCGATTATTTTTTGATTCTTTGTCTTGTTTTGCTCCCCCTTTTGTTGGTAATATTGGGAGTCATTATCACAACTTGATACTGCAAGGCTGTAATATTTATGCATAGAAATCTCCAATCTGATTCAATCCACCCTAATTATGTGTAGCTAGCTGTTCATTATAGAGATGCTGCGATCATTTTTTCATGTGTTTATAAAGATTTTGAATTTGATATGAGATTTAAGTAGCACTCTTCATAATTCCACTCTGAGTGTGTATATGACTTCATCATCAATATGTTCAGGTTTCATTCCGCACAAAGGTTTTCCACCCTAATATCAACAGTAACGGTAGCATTTGCCTTGACATCCTGAAAGAGCAATGGAGCCCTGCCCTCACGATATCCAAGGTGATCTTAATACACTATCCATCTCATATTAAGTGTCTTTTAAGATTATATACATTTCTTACGAAAATCATGCAGAGTACTCCCTCCATTCCTTTTCTTTTGATGTTTTAGAGTTTCAATTATATTCCAGAACTTTTGATGTTTTAGTGAATTTATTATTGTTAAGTTTACCCTTGTTGGAAAACACCATAAACTATTAAAGTAGTTGTGACCTTTGGTTTATCACATGTGAATTTAATGATAAATAAGGACATTTTAGTCAAAAACACATAAATACTTATATACTTTAATTACTCCTTAAAACTTGTGTCAAGAGCTAAAACATCAAAAGAAAAGGAACGGAGGGAGTACTAATTTCTATGGTAAAATGAGCTTCATTTACGAAAGTGCCCATATTAATAGTAGTTAATGGAGTCATTCGGTGCGTCAAGATACACTAAATAAGAGTATATTAGTGGAAAAATGTAATTATTGTTTAATTGTTAATCTAAAATGACAAATTATACTGGACAAGTGATTAAGTGAATGGAATAGTTTTTTGGTTTGTTTGAATTTTCTTGTCAGGGAAACTGAAATATTAGAATTTTGCAGGTGCTACTGTCCATTTGTTCTCTGTTGACTGATCCCAACCCAGATGATCCTCTGGTCCCTGAAATTGCTCATATGTACAAGAGTGACAAAGCTAAGTATGAGGCCACTGCTCGGTCATGGACCCAGAAATATGCCATGGGTTAA

Protein sequence

>MS.gene056522.t1

MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPGDSPFAGGVFLVQIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG