Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93246.t1 | XP_013448322.1 | 84.5 | 317 | 46 | 1 | 1 | 317 | 1 | 314 | 2.00E-144 | 521.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93246.t1 | Q01JD1 | 55.9 | 161 | 48 | 4 | 149 | 286 | 105 | 265 | 4.4e-39 | 163.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93246.t1 | A0A072TXZ6 | 84.5 | 317 | 46 | 1 | 1 | 317 | 1 | 314 | 1.5e-144 | 521.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene93246.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050584 | MS.gene93246 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene051789 | MS.gene93246 | 0.82005 | 8.42E-53 | -1.69E-46 |
| MS.gene05456 | MS.gene93246 | 0.812693 | 3.73E-51 | -1.69E-46 |
| MS.gene059006 | MS.gene93246 | 0.836274 | 1.03E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93246.t1 | MTR_7g444860 | 95.268 | 317 | 12 | 3 | 1 | 317 | 1 | 314 | 0.0 | 619 |
| MS.gene93246.t1 | MTR_3g085180 | 53.957 | 139 | 60 | 2 | 98 | 236 | 115 | 249 | 2.40e-41 | 149 |
| MS.gene93246.t1 | MTR_4g088555 | 72.840 | 81 | 22 | 0 | 152 | 232 | 63 | 143 | 1.38e-36 | 128 |
| MS.gene93246.t1 | MTR_1g053715 | 53.846 | 130 | 57 | 1 | 104 | 230 | 23 | 152 | 2.15e-36 | 134 |
| MS.gene93246.t1 | MTR_7g092930 | 51.145 | 131 | 61 | 1 | 104 | 231 | 17 | 147 | 5.14e-36 | 132 |
| MS.gene93246.t1 | MTR_2g014200 | 67.778 | 90 | 28 | 1 | 138 | 227 | 51 | 139 | 4.43e-35 | 124 |
| MS.gene93246.t1 | MTR_2g078770 | 58.182 | 110 | 45 | 1 | 129 | 238 | 36 | 144 | 9.35e-35 | 124 |
| MS.gene93246.t1 | MTR_8g463140 | 68.235 | 85 | 27 | 0 | 152 | 236 | 65 | 149 | 9.86e-35 | 125 |
| MS.gene93246.t1 | MTR_5g046670 | 51.111 | 135 | 60 | 2 | 98 | 229 | 190 | 321 | 2.13e-34 | 131 |
| MS.gene93246.t1 | MTR_8g005960 | 67.857 | 84 | 27 | 0 | 145 | 228 | 180 | 263 | 3.30e-34 | 127 |
| MS.gene93246.t1 | MTR_3g099080 | 55.000 | 100 | 45 | 0 | 134 | 233 | 80 | 179 | 3.79e-34 | 128 |
| MS.gene93246.t1 | MTR_4g109770 | 53.175 | 126 | 55 | 2 | 101 | 225 | 74 | 196 | 5.89e-34 | 129 |
| MS.gene93246.t1 | MTR_2g461920 | 60.377 | 106 | 36 | 2 | 146 | 251 | 165 | 264 | 1.09e-33 | 130 |
| MS.gene93246.t1 | MTR_7g110320 | 58.182 | 110 | 45 | 1 | 128 | 236 | 120 | 229 | 1.18e-33 | 131 |
| MS.gene93246.t1 | MTR_7g110320 | 58.182 | 110 | 45 | 1 | 128 | 236 | 120 | 229 | 2.19e-33 | 130 |
| MS.gene93246.t1 | MTR_8g096780 | 55.556 | 99 | 44 | 0 | 138 | 236 | 85 | 183 | 1.04e-32 | 125 |
| MS.gene93246.t1 | MTR_2g046550 | 51.938 | 129 | 51 | 3 | 122 | 246 | 116 | 237 | 9.82e-32 | 125 |
| MS.gene93246.t1 | MTR_7g028740 | 65.000 | 80 | 28 | 0 | 152 | 231 | 77 | 156 | 7.16e-31 | 119 |
| MS.gene93246.t1 | MTR_1g086250 | 58.947 | 95 | 39 | 0 | 137 | 231 | 132 | 226 | 1.05e-30 | 122 |
| MS.gene93246.t1 | MTR_8g080680 | 38.983 | 177 | 75 | 5 | 87 | 243 | 58 | 221 | 2.16e-29 | 116 |
| MS.gene93246.t1 | MTR_8g080690 | 46.094 | 128 | 67 | 1 | 98 | 225 | 99 | 224 | 2.34e-29 | 115 |
| MS.gene93246.t1 | MTR_1g035010 | 66.667 | 81 | 27 | 0 | 152 | 232 | 104 | 184 | 2.54e-29 | 118 |
| MS.gene93246.t1 | MTR_8g080670 | 46.269 | 134 | 49 | 2 | 99 | 224 | 116 | 234 | 5.80e-29 | 115 |
| MS.gene93246.t1 | MTR_2g020620 | 56.061 | 66 | 29 | 0 | 165 | 230 | 103 | 168 | 8.66e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93246.t1 | AT1G27370 | 54.839 | 124 | 55 | 1 | 103 | 225 | 126 | 249 | 5.84e-38 | 138 |
| MS.gene93246.t1 | AT1G27370 | 54.839 | 124 | 55 | 1 | 103 | 225 | 126 | 249 | 1.97e-37 | 137 |
| MS.gene93246.t1 | AT1G27370 | 54.839 | 124 | 55 | 1 | 103 | 225 | 126 | 249 | 1.97e-37 | 137 |
| MS.gene93246.t1 | AT1G27370 | 54.839 | 124 | 55 | 1 | 103 | 225 | 126 | 249 | 1.97e-37 | 137 |
| MS.gene93246.t1 | AT1G27370 | 54.839 | 124 | 55 | 1 | 103 | 225 | 126 | 249 | 1.97e-37 | 137 |
| MS.gene93246.t1 | AT1G27370 | 54.839 | 124 | 55 | 1 | 103 | 225 | 126 | 249 | 1.97e-37 | 137 |
| MS.gene93246.t1 | AT1G27370 | 54.839 | 124 | 55 | 1 | 103 | 225 | 126 | 249 | 1.97e-37 | 137 |
| MS.gene93246.t1 | AT1G27360 | 55.285 | 123 | 55 | 0 | 103 | 225 | 126 | 248 | 3.94e-37 | 137 |
| MS.gene93246.t1 | AT1G27360 | 55.285 | 123 | 55 | 0 | 103 | 225 | 126 | 248 | 3.94e-37 | 137 |
| MS.gene93246.t1 | AT1G27360 | 55.285 | 123 | 55 | 0 | 103 | 225 | 126 | 248 | 3.94e-37 | 137 |
| MS.gene93246.t1 | AT1G27360 | 55.285 | 123 | 55 | 0 | 103 | 225 | 126 | 248 | 3.94e-37 | 137 |
| MS.gene93246.t1 | AT2G33810 | 69.231 | 78 | 24 | 0 | 152 | 229 | 54 | 131 | 2.19e-35 | 125 |
| MS.gene93246.t1 | AT5G43270 | 53.846 | 130 | 56 | 3 | 98 | 225 | 115 | 242 | 3.10e-35 | 132 |
| MS.gene93246.t1 | AT5G43270 | 53.846 | 130 | 56 | 3 | 98 | 225 | 115 | 242 | 3.10e-35 | 132 |
| MS.gene93246.t1 | AT5G43270 | 53.846 | 130 | 56 | 3 | 98 | 225 | 115 | 242 | 3.10e-35 | 132 |
| MS.gene93246.t1 | AT3G15270 | 61.458 | 96 | 37 | 0 | 152 | 247 | 63 | 158 | 4.79e-35 | 125 |
| MS.gene93246.t1 | AT2G42200 | 63.736 | 91 | 33 | 0 | 149 | 239 | 71 | 161 | 2.57e-33 | 126 |
| MS.gene93246.t1 | AT1G53160 | 70.000 | 80 | 24 | 0 | 152 | 231 | 54 | 133 | 2.60e-33 | 121 |
| MS.gene93246.t1 | AT1G02065 | 70.513 | 78 | 23 | 0 | 148 | 225 | 184 | 261 | 3.18e-33 | 125 |
| MS.gene93246.t1 | AT1G53160 | 70.000 | 80 | 24 | 0 | 152 | 231 | 54 | 133 | 3.39e-33 | 120 |
| MS.gene93246.t1 | AT1G53160 | 70.000 | 80 | 24 | 0 | 152 | 231 | 54 | 133 | 3.39e-33 | 120 |
| MS.gene93246.t1 | AT3G57920 | 53.279 | 122 | 41 | 2 | 104 | 225 | 27 | 132 | 6.44e-33 | 125 |
| MS.gene93246.t1 | AT3G60030 | 58.654 | 104 | 42 | 1 | 134 | 236 | 108 | 211 | 8.04e-33 | 129 |
| MS.gene93246.t1 | AT1G69170 | 53.982 | 113 | 39 | 1 | 113 | 225 | 98 | 197 | 1.44e-32 | 125 |
| MS.gene93246.t1 | AT5G50670 | 57.303 | 89 | 38 | 0 | 145 | 233 | 94 | 182 | 7.50e-31 | 119 |
| MS.gene93246.t1 | AT5G50670 | 57.303 | 89 | 38 | 0 | 145 | 233 | 94 | 182 | 7.50e-31 | 119 |
| MS.gene93246.t1 | AT5G50570 | 57.303 | 89 | 38 | 0 | 145 | 233 | 94 | 182 | 7.50e-31 | 119 |
| MS.gene93246.t1 | AT5G50570 | 57.303 | 89 | 38 | 0 | 145 | 233 | 94 | 182 | 7.50e-31 | 119 |
| MS.gene93246.t1 | AT1G76580 | 66.667 | 81 | 27 | 0 | 151 | 231 | 113 | 193 | 1.12e-30 | 122 |
| MS.gene93246.t1 | AT1G76580 | 66.667 | 81 | 27 | 0 | 151 | 231 | 113 | 193 | 1.14e-30 | 122 |
| MS.gene93246.t1 | AT1G76580 | 66.667 | 81 | 27 | 0 | 151 | 231 | 113 | 193 | 2.07e-30 | 121 |
| MS.gene93246.t1 | AT1G20980 | 70.130 | 77 | 23 | 0 | 152 | 228 | 120 | 196 | 3.10e-30 | 121 |
| MS.gene93246.t1 | AT2G47070 | 69.333 | 75 | 23 | 0 | 152 | 226 | 106 | 180 | 9.68e-30 | 119 |
| MS.gene93246.t1 | AT5G18830 | 44.211 | 95 | 53 | 0 | 143 | 237 | 129 | 223 | 1.93e-19 | 89.4 |
| MS.gene93246.t1 | AT5G18830 | 44.211 | 95 | 53 | 0 | 143 | 237 | 129 | 223 | 2.10e-19 | 89.4 |
| MS.gene93246.t1 | AT5G18830 | 44.211 | 95 | 53 | 0 | 143 | 237 | 129 | 223 | 2.18e-19 | 89.4 |
| MS.gene93246.t1 | AT1G02065 | 63.934 | 61 | 20 | 1 | 148 | 206 | 184 | 244 | 7.84e-19 | 84.3 |
| MS.gene93246.t1 | AT2G47070 | 72.549 | 51 | 14 | 0 | 176 | 226 | 1 | 51 | 9.00e-18 | 84.3 |
Find 103 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAAGACGGCGGCGGTGG+TGG | 0.238002 | 7.4:+57990406 | MS.gene93246:CDS |
| GATGTGAGTGGTGGTGGTGG+GGG | 0.246735 | 7.4:+57990338 | MS.gene93246:CDS |
| ATGTGAGTGGTGGTGGTGGG+GGG | 0.286741 | 7.4:+57990339 | MS.gene93246:CDS |
| GGATGTGAGTGGTGGTGGTG+GGG | 0.287064 | 7.4:+57990337 | MS.gene93246:CDS |
| AAACCCAACACCACAACTTT+TGG | 0.295801 | 7.4:-57990539 | None:intergenic |
| CATATGTTGTGGGAAATAAT+TGG | 0.328845 | 7.4:-57993929 | None:intergenic |
| TGTCATCTCGGACTGATTCA+TGG | 0.336380 | 7.4:+57993749 | MS.gene93246:CDS |
| AGGATGTGAGTGGTGGTGGT+GGG | 0.362480 | 7.4:+57990336 | MS.gene93246:CDS |
| TGGTGGGAAGACGGCGGCGG+TGG | 0.367065 | 7.4:+57990403 | MS.gene93246:CDS |
| GAGGATGTGAGTGGTGGTGG+TGG | 0.374532 | 7.4:+57990335 | MS.gene93246:CDS |
| CACCTCACATGTTTGAAGTT+GGG | 0.387603 | 7.4:+57990296 | MS.gene93246:CDS |
| GGCGGTGGTGGGTGGTTATA+CGG | 0.389810 | 7.4:+57990418 | MS.gene93246:CDS |
| GGAGGATATTGTGGTGGTGG+TGG | 0.392988 | 7.4:+57990386 | MS.gene93246:CDS |
| AAGACGGCGGCGGTGGTGGG+TGG | 0.396016 | 7.4:+57990410 | MS.gene93246:CDS |
| AAAAGTTGTGGTGTTGGGTT+TGG | 0.400118 | 7.4:+57990541 | MS.gene93246:CDS |
| GTGACAAGGTGTCAGGTGGA+TGG | 0.400175 | 7.4:+57990443 | MS.gene93246:CDS |
| TTTGAGGATGTGAGTGGTGG+TGG | 0.427873 | 7.4:+57990332 | MS.gene93246:CDS |
| GGGAAGACGGCGGCGGTGGT+GGG | 0.428096 | 7.4:+57990407 | MS.gene93246:CDS |
| GCACCAAAAGTTGTGGTGTT+GGG | 0.429036 | 7.4:+57990536 | MS.gene93246:CDS |
| AGAAAACCGAGCATCGATAA+TGG | 0.432077 | 7.4:+57993828 | MS.gene93246:CDS |
| CGTCGCCTTCGTTCTGAGGC+AGG | 0.441947 | 7.4:-57990211 | None:intergenic |
| AAACATGTGAGGTGTGGATC+AGG | 0.445259 | 7.4:-57990287 | None:intergenic |
| CGTTATTGCTAGTATTACTT+TGG | 0.445973 | 7.4:-57990040 | None:intergenic |
| TAGCTAGACCTGCTTCATTA+CGG | 0.449973 | 7.4:-57990175 | None:intergenic |
| CTTTCTCTCTTCTGTCATCT+CGG | 0.450629 | 7.4:+57993737 | MS.gene93246:CDS |
| ATACGGTGGAGGTGTGTCTC+GGG | 0.452355 | 7.4:+57990253 | MS.gene93246:CDS |
| ACACCTCACATGTTTGAAGT+TGG | 0.453165 | 7.4:+57990295 | MS.gene93246:CDS |
| CATGTTTGAAGTTGGGGAAG+AGG | 0.460346 | 7.4:+57990303 | MS.gene93246:CDS |
| CATACGGTGGAGGTGTGTCT+CGG | 0.463683 | 7.4:+57990252 | MS.gene93246:CDS |
| ATATAAACAAACATGGACTT+TGG | 0.464767 | 7.4:+57989987 | None:intergenic |
| AGTTGTAGAAGGAGACTGGC+AGG | 0.470576 | 7.4:+57992689 | MS.gene93246:CDS |
| GGGCTGGCTGGGGAGAAGAA+AGG | 0.471082 | 7.4:+57990359 | MS.gene93246:CDS |
| GCCTAGCCATTATCGATGCT+CGG | 0.471586 | 7.4:-57993834 | None:intergenic |
| GATTCTGTCAACAGTGTAGC+AGG | 0.478919 | 7.4:+57990570 | MS.gene93246:CDS |
| GGCACCAAAAGTTGTGGTGT+TGG | 0.478965 | 7.4:+57990535 | MS.gene93246:CDS |
| GGCTGGCTGGGGAGAAGAAA+GGG | 0.481722 | 7.4:+57990360 | MS.gene93246:CDS |
| TACGGCGGTGACAAGGTGTC+AGG | 0.483370 | 7.4:+57990436 | MS.gene93246:CDS |
| AATTCCTCCCAACAGAATCA+TGG | 0.485519 | 7.4:-57992739 | None:intergenic |
| TAATGCAGCACTGCATCTTA+CGG | 0.490156 | 7.4:-57993791 | None:intergenic |
| CAAAGTAATACTAGCAATAA+CGG | 0.492833 | 7.4:+57990041 | MS.gene93246:CDS |
| ACCTCACATGTTTGAAGTTG+GGG | 0.495007 | 7.4:+57990297 | MS.gene93246:CDS |
| TGGTGGTGGGAAGACGGCGG+CGG | 0.500366 | 7.4:+57990400 | MS.gene93246:CDS |
| GCCGCCAACCGTAATGAAGC+AGG | 0.503720 | 7.4:+57990167 | MS.gene93246:CDS |
| TGAATGCTAAGGAGTATCAT+AGG | 0.506629 | 7.4:+57990483 | MS.gene93246:CDS |
| AAGAAGTTGTAGAAGGAGAC+TGG | 0.506657 | 7.4:+57992685 | MS.gene93246:CDS |
| CCATGCCGTGGAAGATTACA+AGG | 0.507477 | 7.4:+57993891 | MS.gene93246:CDS |
| GGAGTATCATAGGAGACATA+AGG | 0.511196 | 7.4:+57990493 | MS.gene93246:CDS |
| TGCTTCATTACGGTTGGCGG+CGG | 0.511587 | 7.4:-57990165 | None:intergenic |
| GACTGATTCATGGCTTTCAC+CGG | 0.514906 | 7.4:+57993759 | MS.gene93246:CDS |
| TTGTGGTGGTGGTGGGAAGA+CGG | 0.516504 | 7.4:+57990394 | MS.gene93246:CDS |
| CGTCCGTCGCCTTCGTTCTG+AGG | 0.519896 | 7.4:-57990215 | None:intergenic |
| GAGGATATTGTGGTGGTGGT+GGG | 0.521993 | 7.4:+57990387 | MS.gene93246:CDS |
| GGAAATAATTGGACTCGGAA+TGG | 0.522818 | 7.4:-57993918 | None:intergenic |
| AGAGCTCCCATGATTCTGTT+GGG | 0.525869 | 7.4:+57992732 | MS.gene93246:CDS |
| ACCTGCTTCATTACGGTTGG+CGG | 0.527490 | 7.4:-57990168 | None:intergenic |
| TGACAAGGTGTCAGGTGGAT+GGG | 0.531625 | 7.4:+57990444 | MS.gene93246:CDS |
| TGTTGGGAGGAATTCCTCAC+AGG | 0.532096 | 7.4:+57992748 | MS.gene93246:CDS |
| CATCTTACGGAGAGGTCAGC+CGG | 0.534335 | 7.4:-57993778 | None:intergenic |
| AAGAGCTCCCATGATTCTGT+TGG | 0.535482 | 7.4:+57992731 | MS.gene93246:CDS |
| TAAACAAACATGGACTTTGG+AGG | 0.536667 | 7.4:+57989990 | None:intergenic |
| GGGGAGAAGAAAGGGAAAGG+AGG | 0.540943 | 7.4:+57990368 | MS.gene93246:CDS |
| AAAGGAGGATATTGTGGTGG+TGG | 0.543034 | 7.4:+57990383 | MS.gene93246:CDS |
| CATCAAATTCTGACACAACA+TGG | 0.543897 | 7.4:-57992655 | None:intergenic |
| AAAGGGAAAGGAGGATATTG+TGG | 0.551862 | 7.4:+57990377 | MS.gene93246:CDS |
| TAGACCTGCTTCATTACGGT+TGG | 0.558905 | 7.4:-57990171 | None:intergenic |
| ATTCCTCCCAACAGAATCAT+GGG | 0.563033 | 7.4:-57992738 | None:intergenic |
| CGACAGTATCGGAGTGCATA+CGG | 0.565269 | 7.4:+57990236 | MS.gene93246:CDS |
| GATCTCCTTGTAATCTTCCA+CGG | 0.568098 | 7.4:-57993896 | None:intergenic |
| TATCGGAGTGCATACGGTGG+AGG | 0.569830 | 7.4:+57990242 | MS.gene93246:CDS |
| AATACGTCTTAGACAGAGAC+TGG | 0.570424 | 7.4:+57993857 | MS.gene93246:CDS |
| TTGTGGGAAATAATTGGACT+CGG | 0.572180 | 7.4:-57993923 | None:intergenic |
| GTGGTTATACGGCGGTGACA+AGG | 0.572879 | 7.4:+57990429 | MS.gene93246:CDS |
| CCTTGTAATCTTCCACGGCA+TGG | 0.577549 | 7.4:-57993891 | None:intergenic |
| AAACAAACATGGACTTTGGA+GGG | 0.586271 | 7.4:+57989991 | None:intergenic |
| AGCAATAACGGTAACAGTAA+CGG | 0.588128 | 7.4:+57990053 | MS.gene93246:CDS |
| TACGGTGGAGGTGTGTCTCG+GGG | 0.588358 | 7.4:+57990254 | MS.gene93246:CDS |
| GGTTTGTGAGATGCATTCAA+AGG | 0.590461 | 7.4:+57990514 | MS.gene93246:CDS |
| CGTGGCATTGATGAATGCTA+AGG | 0.590898 | 7.4:+57990472 | MS.gene93246:CDS |
| AACTTCAAACATGTGAGGTG+TGG | 0.592893 | 7.4:-57990293 | None:intergenic |
| TTCAAAGGCACCAAAAGTTG+TGG | 0.596745 | 7.4:+57990529 | MS.gene93246:CDS |
| AAGGCGACGGACGACAGTAT+CGG | 0.601886 | 7.4:+57990225 | MS.gene93246:CDS |
| AGTAGTGGTAGTACTACTAC+TGG | 0.602278 | 7.4:+57990089 | MS.gene93246:CDS |
| GGCGGTGACAAGGTGTCAGG+TGG | 0.614891 | 7.4:+57990439 | MS.gene93246:CDS |
| TCTGCGGAAACATATGTTGT+GGG | 0.616543 | 7.4:-57993939 | None:intergenic |
| ACCGAGCATCGATAATGGCT+AGG | 0.618479 | 7.4:+57993833 | MS.gene93246:CDS |
| GCATTTGCAGCACCATGCCG+TGG | 0.620143 | 7.4:+57993879 | MS.gene93246:CDS |
| GTACTACTACTGGTACTGCA+TGG | 0.620845 | 7.4:+57990099 | MS.gene93246:CDS |
| AACCATCACTAATGTGTCTG+CGG | 0.630280 | 7.4:-57993955 | None:intergenic |
| TGGTGGTGGTGGGAAGACGG+CGG | 0.632124 | 7.4:+57990397 | MS.gene93246:CDS |
| CTGCCTCAGAACGAAGGCGA+CGG | 0.639717 | 7.4:+57990212 | MS.gene93246:CDS |
| TCCCCAACTTCAAACATGTG+AGG | 0.641757 | 7.4:-57990298 | None:intergenic |
| GCTGGGGAGAAGAAAGGGAA+AGG | 0.645912 | 7.4:+57990365 | MS.gene93246:CDS |
| GTTGTAGAAGGAGACTGGCA+GGG | 0.647920 | 7.4:+57992690 | MS.gene93246:CDS |
| GTTGGGAGGAATTCCTCACA+GGG | 0.649789 | 7.4:+57992749 | MS.gene93246:CDS |
| GGGAAAGGAGGATATTGTGG+TGG | 0.654744 | 7.4:+57990380 | MS.gene93246:CDS |
| TCAGGTGGATGGGTGTAACG+TGG | 0.655827 | 7.4:+57990454 | MS.gene93246:CDS |
| TGCAACAATCTTACCCTGTG+AGG | 0.663914 | 7.4:-57992762 | None:intergenic |
| ATGTACCTGCCTCAGAACGA+AGG | 0.668073 | 7.4:+57990206 | MS.gene93246:CDS |
| GTCTGCGGAAACATATGTTG+TGG | 0.669116 | 7.4:-57993940 | None:intergenic |
| GCTCCCATGATTCTGTTGGG+AGG | 0.673767 | 7.4:+57992735 | MS.gene93246:CDS |
| CAGCACTGCATCTTACGGAG+AGG | 0.706479 | 7.4:-57993786 | None:intergenic |
| CAGTATCGGAGTGCATACGG+TGG | 0.746660 | 7.4:+57990239 | MS.gene93246:CDS |
| GGTGGTGGGTGGTTATACGG+CGG | 0.751778 | 7.4:+57990421 | MS.gene93246:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACCAAAAAAATTAAAAAA+AGG | - | chr7.4:57993429-57993448 | None:intergenic | 10.0% |
| !!! | AAACCTTTTTTTAATTTTTT+TGG | + | chr7.4:57993423-57993442 | MS.gene93246:intron | 10.0% |
| !!! | ACAAAATTTTGAATATTTAT+AGG | + | chr7.4:57991994-57992013 | MS.gene93246:intron | 10.0% |
| !!! | CAAAATTTTGAATATTTATA+GGG | + | chr7.4:57991995-57992014 | MS.gene93246:intron | 10.0% |
| !! | AAAATGGTTAATTAAGTAAA+TGG | - | chr7.4:57992022-57992041 | None:intergenic | 15.0% |
| !! | AACAAAATTCTGAATATTTA+TGG | - | chr7.4:57991908-57991927 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+GGG | - | chr7.4:57991907-57991926 | None:intergenic | 15.0% |
| !! | ATAATAATCACAATAACAAA+TGG | + | chr7.4:57992389-57992408 | MS.gene93246:intron | 15.0% |
| !! | ATAATATTTACTGCTAAATT+TGG | - | chr7.4:57990847-57990866 | None:intergenic | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | + | chr7.4:57993548-57993567 | MS.gene93246:intron | 15.0% |
| !! | GAAAACTAAAATAAACATAA+GGG | - | chr7.4:57993567-57993548 | None:intergenic | 15.0% |
| !! | GATAATTAATATGAAAAATG+TGG | + | chr7.4:57992608-57992627 | MS.gene93246:intron | 15.0% |
| !! | TAAATATTCATGTAAGTAAA+TGG | + | chr7.4:57991850-57991869 | MS.gene93246:intron | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | + | chr7.4:57993547-57993566 | MS.gene93246:intron | 15.0% |
| !! | TGAAAACTAAAATAAACATA+AGG | - | chr7.4:57993566-57993547 | None:intergenic | 15.0% |
| !! | TGACAAAAAAAAAAAATGAT+TGG | + | chr7.4:57991101-57991120 | MS.gene93246:intron | 15.0% |
| !! | TTACTTACATGAATATTTAT+GGG | - | chr7.4:57991849-57991868 | None:intergenic | 15.0% |
| !! | TTCAAAAAAAGTAAATATCA+TGG | - | chr7.4:57992830-57992849 | None:intergenic | 15.0% |
| !! | TTTACTTACATGAATATTTA+TGG | - | chr7.4:57991850-57991869 | None:intergenic | 15.0% |
| !! | TTTATTGATAAAATAGTATG+AGG | - | chr7.4:57991412-57991431 | None:intergenic | 15.0% |
| !!! | AAAAAATGAATTGATTTTAG+AGG | + | chr7.4:57992489-57992508 | MS.gene93246:intron | 15.0% |
| !!! | TTAACCATTTTTTATACAAT+CGG | + | chr7.4:57992031-57992050 | MS.gene93246:intron | 15.0% |
| !!! | TTATATATTTTCAATGCATT+AGG | - | chr7.4:57992941-57992960 | None:intergenic | 15.0% |
| !!! | TTGAAACTTTTAAAACATAA+GGG | - | chr7.4:57993257-57993276 | None:intergenic | 15.0% |
| !!! | TTTAAGGTTAATTAAGTAAA+TGG | + | chr7.4:57991821-57991840 | MS.gene93246:intron | 15.0% |
| !! | AATTAATATGAAAAATGTGG+TGG | + | chr7.4:57992611-57992630 | MS.gene93246:intron | 20.0% |
| !! | CAAAAAAATATTGAAAACGT+AGG | - | chr7.4:57993181-57993200 | None:intergenic | 20.0% |
| !! | CAAAATTCTGAATATTTATG+GGG | - | chr7.4:57991906-57991925 | None:intergenic | 20.0% |
| !! | CATAATATATACAAGGTTTA+GGG | + | chr7.4:57991515-57991534 | MS.gene93246:intron | 20.0% |
| !! | CCTACAAAATAAATGTTATA+GGG | + | chr7.4:57991935-57991954 | MS.gene93246:intron | 20.0% |
| !! | GAATTATATTTATCTAATGC+AGG | + | chr7.4:57992125-57992144 | MS.gene93246:intron | 20.0% |
| !! | TACTTACATGAATATTTATG+GGG | - | chr7.4:57991848-57991867 | None:intergenic | 20.0% |
| !! | TTACTAAGCAGATAAAAAAA+AGG | - | chr7.4:57993592-57993611 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr7.4:57991963-57991982 | MS.gene93246:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr7.4:57991964-57991983 | MS.gene93246:intron | 20.0% |
| !!! | ATAAGAGTACACAATTTTTT+TGG | + | chr7.4:57992957-57992976 | MS.gene93246:intron | 20.0% |
| !!! | ATGTTTTAAAAGTTTCAAGT+TGG | + | chr7.4:57993259-57993278 | MS.gene93246:intron | 20.0% |
| !!! | ATTGCTAATATCTTTTTTAG+TGG | - | chr7.4:57991559-57991578 | None:intergenic | 20.0% |
| !!! | CCTATAACATTTATTTTGTA+GGG | - | chr7.4:57991937-57991956 | None:intergenic | 20.0% |
| !!! | CGTTTTATTTATGTATTCTT+CGG | + | chr7.4:57991151-57991170 | MS.gene93246:intron | 20.0% |
| !!! | CGTTTTCAATATTTTTTTGA+AGG | + | chr7.4:57993182-57993201 | MS.gene93246:intron | 20.0% |
| !!! | CTATTTTCTACTAGTAAATA+TGG | - | chr7.4:57990791-57990810 | None:intergenic | 20.0% |
| !!! | CTTGAAACTTTTAAAACATA+AGG | - | chr7.4:57993258-57993277 | None:intergenic | 20.0% |
| !!! | GTTTATTTTAGTTTTCAAGT+TGG | - | chr7.4:57993544-57993563 | None:intergenic | 20.0% |
| !!! | GTTTATTTTAGTTTTCATGT+TGG | + | chr7.4:57993230-57993249 | MS.gene93246:intron | 20.0% |
| !!! | TAACCATTTTTTATACAATC+GGG | + | chr7.4:57992032-57992051 | MS.gene93246:intron | 20.0% |
| !!! | TTGAAACTTTTAAAACGTAA+TGG | - | chr7.4:57993536-57993517 | None:intergenic | 20.0% |
| !!! | TTTGTATGTTTGAAATTTTC+TGG | - | chr7.4:57992316-57992335 | None:intergenic | 20.0% |
| ! | AATCTTTAAACGTTAAGTGA+TGG | - | chr7.4:57993352-57993371 | None:intergenic | 25.0% |
| ! | ATTCAAAAAGAAGTTGTAGA+AGG | + | chr7.4:57992678-57992697 | MS.gene93246:CDS | 25.0% |
| ! | CAAAGTAATACTAGCAATAA+CGG | + | chr7.4:57990041-57990060 | MS.gene93246:CDS | 25.0% |
| ! | CACAATGCATAATATATACA+AGG | + | chr7.4:57991508-57991527 | MS.gene93246:intron | 25.0% |
| ! | CACTTAACGTTTAAAGATTT+GGG | + | chr7.4:57993353-57993372 | MS.gene93246:intron | 25.0% |
| ! | CCCTACAAAATAAATGTTAT+AGG | + | chr7.4:57991934-57991953 | MS.gene93246:intron | 25.0% |
| ! | GCATAATATATACAAGGTTT+AGG | + | chr7.4:57991514-57991533 | MS.gene93246:intron | 25.0% |
| ! | TAACCCGATTGTATAAAAAA+TGG | - | chr7.4:57992038-57992057 | None:intergenic | 25.0% |
| ! | TACAATTGCATTCAATATCA+TGG | - | chr7.4:57992863-57992882 | None:intergenic | 25.0% |
| ! | TCACTTAACGTTTAAAGATT+TGG | + | chr7.4:57993352-57993371 | MS.gene93246:intron | 25.0% |
| ! | TTGTTTATCTAATGTGTAGT+TGG | - | chr7.4:57991635-57991654 | None:intergenic | 25.0% |
| !! | AAAATGCACTTCTCATTTTA+AGG | - | chr7.4:57992081-57992100 | None:intergenic | 25.0% |
| !! | ATAATTGTTGTTATGTTCAC+AGG | + | chr7.4:57990693-57990712 | MS.gene93246:intron | 25.0% |
| !! | ATAGTCCTTTAAAAAACGAT+TGG | + | chr7.4:57990807-57990826 | MS.gene93246:intron | 25.0% |
| !! | CAAAGGTGTAAAAATTATGT+GGG | + | chr7.4:57992519-57992538 | MS.gene93246:intron | 25.0% |
| !! | GAAGATACTTTAAAGATAGA+TGG | + | chr7.4:57993089-57993108 | MS.gene93246:intron | 25.0% |
| !! | GATGTTTGTTGGAATAATAA+TGG | + | chr7.4:57991259-57991278 | MS.gene93246:intron | 25.0% |
| !! | TAGTTGTATAGGTTTCTTTT+TGG | - | chr7.4:57992274-57992293 | None:intergenic | 25.0% |
| !! | TATTTGAGTTTCTTAGAGAT+CGG | - | chr7.4:57991609-57991628 | None:intergenic | 25.0% |
| !! | TATTTTCTTCTCTCTGTAAA+AGG | - | chr7.4:57993634-57993653 | None:intergenic | 25.0% |
| !! | TCAAAGGTGTAAAAATTATG+TGG | + | chr7.4:57992518-57992537 | MS.gene93246:intron | 25.0% |
| !!! | AAGTACCAATCGTTTTTTAA+AGG | - | chr7.4:57990815-57990834 | None:intergenic | 25.0% |
| !!! | ACACAGACACAATTTTTTTA+AGG | + | chr7.4:57991805-57991824 | MS.gene93246:intron | 25.0% |
| !!! | ACGTTTTAAAAGTTTCAAGT+TGG | + | chr7.4:57993288-57993307 | MS.gene93246:intron | 25.0% |
| !!! | ACGTTTTAAAAGTTTCAAGT+TGG | - | chr7.4:57993307-57993288 | None:intergenic | 25.0% |
| !!! | CCCTATAACATTTATTTTGT+AGG | - | chr7.4:57991938-57991957 | None:intergenic | 25.0% |
| !!! | GTAATACTTTCTAGTTGTAT+AGG | - | chr7.4:57992285-57992304 | None:intergenic | 25.0% |
| !!! | GTTTTTTGTTTCTTGTAATC+AGG | + | chr7.4:57993706-57993725 | MS.gene93246:intron | 25.0% |
| !!! | TCTATCTTTAAAGTATCTTC+TGG | - | chr7.4:57993089-57993108 | None:intergenic | 25.0% |
| AACGTCCATTTATTTACGTT+TGG | + | chr7.4:57991184-57991203 | MS.gene93246:intron | 30.0% | |
| AAGGACTATAGTTACTCTAT+CGG | - | chr7.4:57992996-57993015 | None:intergenic | 30.0% | |
| AATATGAAAAATGTGGTGGT+GGG | + | chr7.4:57992615-57992634 | MS.gene93246:intron | 30.0% | |
| AGTACTATAGATGTGGATAT+TGG | - | chr7.4:57992164-57992183 | None:intergenic | 30.0% | |
| CAAACATCAGATACATTTGT+TGG | - | chr7.4:57991247-57991266 | None:intergenic | 30.0% | |
| CAAATGTATCTGATGTTTGT+TGG | + | chr7.4:57991248-57991267 | MS.gene93246:intron | 30.0% | |
| CAACACCAAACGTAAATAAA+TGG | - | chr7.4:57991192-57991211 | None:intergenic | 30.0% | |
| CAAGCATAGATCAAATGAAT+TGG | - | chr7.4:57991006-57991025 | None:intergenic | 30.0% | |
| CATAGTAGACAATATGTTGA+TGG | + | chr7.4:57993677-57993696 | MS.gene93246:intron | 30.0% | |
| CATATGTTGTGGGAAATAAT+TGG | - | chr7.4:57993932-57993951 | None:intergenic | 30.0% | |
| CGTTATTGCTAGTATTACTT+TGG | - | chr7.4:57990043-57990062 | None:intergenic | 30.0% | |
| TAATATGAAAAATGTGGTGG+TGG | + | chr7.4:57992614-57992633 | MS.gene93246:intron | 30.0% | |
| TCGAATAACAAATCCACTAT+TGG | + | chr7.4:57991768-57991787 | MS.gene93246:intron | 30.0% | |
| TGGAGATTCAAAGATAACTA+CGG | + | chr7.4:57991297-57991316 | MS.gene93246:intron | 30.0% | |
| TTGATCTATGCTTGATTGTT+GGG | + | chr7.4:57991012-57991031 | MS.gene93246:intron | 30.0% | |
| TTTGATCTATGCTTGATTGT+TGG | + | chr7.4:57991011-57991030 | MS.gene93246:intron | 30.0% | |
| ! | ACTTGACTTTTATCCAATAG+TGG | - | chr7.4:57991784-57991803 | None:intergenic | 30.0% |
| ! | AGATTGAAGGTGAATCTTTT+GGG | - | chr7.4:57991724-57991743 | None:intergenic | 30.0% |
| ! | ATGTAAATTTGAGACAGTCA+AGG | - | chr7.4:57993015-57993034 | None:intergenic | 30.0% |
| ! | ATTATCTTTGAGTAGCTTTG+AGG | + | chr7.4:57992337-57992356 | MS.gene93246:intron | 30.0% |
| ! | TTAAACGTTAAGTGATGGAA+AGG | - | chr7.4:57993347-57993366 | None:intergenic | 30.0% |
| ! | TTACAACGACGATCATTTTA+AGG | - | chr7.4:57990970-57990989 | None:intergenic | 30.0% |
| ! | TTATTCGAGCTTGTTCTTTA+TGG | - | chr7.4:57991756-57991775 | None:intergenic | 30.0% |
| ! | TTGGGATTTTGAATTCTCTT+GGG | - | chr7.4:57991706-57991725 | None:intergenic | 30.0% |
| ! | TTTAATAAATGAGGTGTCTG+AGG | + | chr7.4:57990649-57990668 | MS.gene93246:intron | 30.0% |
| ! | TTTGTTTCTTGTAATCAGGT+GGG | + | chr7.4:57993710-57993729 | MS.gene93246:intron | 30.0% |
| !! | ACATTTGTTGGCTTTAAAGA+GGG | - | chr7.4:57991235-57991254 | None:intergenic | 30.0% |
| !! | CATTTATTTACGTTTGGTGT+TGG | + | chr7.4:57991190-57991209 | MS.gene93246:intron | 30.0% |
| !! | TACATTTGTTGGCTTTAAAG+AGG | - | chr7.4:57991236-57991255 | None:intergenic | 30.0% |
| !! | TTTGGGATTTTGAATTCTCT+TGG | - | chr7.4:57991707-57991726 | None:intergenic | 30.0% |
| !! | TTTTGTTTCTTGTAATCAGG+TGG | + | chr7.4:57993709-57993728 | MS.gene93246:intron | 30.0% |
| !!! | GCTAATATCTTTTTTAGTGG+TGG | - | chr7.4:57991556-57991575 | None:intergenic | 30.0% |
| !!! | GTATCTTCTGGTTGTTATTT+TGG | - | chr7.4:57993077-57993096 | None:intergenic | 30.0% |
| !!! | TGTTTTAGGGATTTGTTCAT+TGG | + | chr7.4:57992577-57992596 | MS.gene93246:intron | 30.0% |
| AATGGTTTAGACGACAAAAG+TGG | + | chr7.4:57991277-57991296 | MS.gene93246:intron | 35.0% | |
| AGCAATAACGGTAACAGTAA+CGG | + | chr7.4:57990053-57990072 | MS.gene93246:CDS | 35.0% | |
| AGGACTAACTTATTCTAACG+TGG | - | chr7.4:57993327-57993346 | None:intergenic | 35.0% | |
| ATCCACATCTATAGTACTAG+TGG | + | chr7.4:57992166-57992185 | MS.gene93246:intron | 35.0% | |
| ATCCACTAGTACTATAGATG+TGG | - | chr7.4:57992171-57992190 | None:intergenic | 35.0% | |
| ATCTTCCGTTCGTAATTTGA+TGG | + | chr7.4:57993050-57993069 | MS.gene93246:intron | 35.0% | |
| ATGGTCTAATTCGAGATTGA+AGG | - | chr7.4:57991737-57991756 | None:intergenic | 35.0% | |
| CATCAAATTCTGACACAACA+TGG | - | chr7.4:57992658-57992677 | None:intergenic | 35.0% | |
| CCAAGATTATTCACACAATC+TGG | + | chr7.4:57992191-57992210 | MS.gene93246:intron | 35.0% | |
| CCAGATTGTGTGAATAATCT+TGG | - | chr7.4:57992194-57992213 | None:intergenic | 35.0% | |
| GGACTAACTTATTCTAACGT+GGG | - | chr7.4:57993326-57993345 | None:intergenic | 35.0% | |
| TGATCTATGCTTGATTGTTG+GGG | + | chr7.4:57991013-57991032 | MS.gene93246:intron | 35.0% | |
| TTGGTCCATCAAATTACGAA+CGG | - | chr7.4:57993058-57993077 | None:intergenic | 35.0% | |
| TTGTGGGAAATAATTGGACT+CGG | - | chr7.4:57993926-57993945 | None:intergenic | 35.0% | |
| ! | AATAAATGGACGTTTTCTGC+AGG | - | chr7.4:57991178-57991197 | None:intergenic | 35.0% |
| ! | AATTTTTACACCTTTGACCG+AGG | - | chr7.4:57992515-57992534 | None:intergenic | 35.0% |
| ! | ATATGAAAAATGTGGTGGTG+GGG | + | chr7.4:57992616-57992635 | MS.gene93246:intron | 35.0% |
| ! | GAGATTGAAGGTGAATCTTT+TGG | - | chr7.4:57991725-57991744 | None:intergenic | 35.0% |
| ! | GTAACAGTAACGGTTTTACT+TGG | + | chr7.4:57990063-57990082 | MS.gene93246:CDS | 35.0% |
| ! | TTCCAAAGTGAGTAACGTTT+TGG | + | chr7.4:57993488-57993507 | MS.gene93246:intron | 35.0% |
| !! | GTAGACAATATGTTGATGGT+TGG | + | chr7.4:57993681-57993700 | MS.gene93246:intron | 35.0% |
| !! | TGAATGCTAAGGAGTATCAT+AGG | + | chr7.4:57990483-57990502 | MS.gene93246:CDS | 35.0% |
| !! | TGAATTGATTTTAGAGGCCT+CGG | + | chr7.4:57992495-57992514 | MS.gene93246:intron | 35.0% |
| !!! | CATTATTTTGAGGATGTGAG+TGG | + | chr7.4:57990326-57990345 | MS.gene93246:CDS | 35.0% |
| AAAGGGAAAGGAGGATATTG+TGG | + | chr7.4:57990377-57990396 | MS.gene93246:CDS | 40.0% | |
| AACTTCAAACATGTGAGGTG+TGG | - | chr7.4:57990296-57990315 | None:intergenic | 40.0% | |
| AAGAAGTTGTAGAAGGAGAC+TGG | + | chr7.4:57992685-57992704 | MS.gene93246:CDS | 40.0% | |
| AATACGTCTTAGACAGAGAC+TGG | + | chr7.4:57993857-57993876 | MS.gene93246:CDS | 40.0% | |
| AATTCCTCCCAACAGAATCA+TGG | - | chr7.4:57992742-57992761 | None:intergenic | 40.0% | |
| AGTAGTGGTAGTACTACTAC+TGG | + | chr7.4:57990089-57990108 | MS.gene93246:CDS | 40.0% | |
| ATTCCTCCCAACAGAATCAT+GGG | - | chr7.4:57992741-57992760 | None:intergenic | 40.0% | |
| CTTTCTCTCTTCTGTCATCT+CGG | + | chr7.4:57993737-57993756 | MS.gene93246:CDS | 40.0% | |
| GATCTCCTTGTAATCTTCCA+CGG | - | chr7.4:57993899-57993918 | None:intergenic | 40.0% | |
| GGAAATAATTGGACTCGGAA+TGG | - | chr7.4:57993921-57993940 | None:intergenic | 40.0% | |
| GGTTTGTGAGATGCATTCAA+AGG | + | chr7.4:57990514-57990533 | MS.gene93246:CDS | 40.0% | |
| GTCCAAAACGTTACTCACTT+TGG | - | chr7.4:57993493-57993512 | None:intergenic | 40.0% | |
| TAATGCAGCACTGCATCTTA+CGG | - | chr7.4:57993794-57993813 | None:intergenic | 40.0% | |
| TAGCTAGACCTGCTTCATTA+CGG | - | chr7.4:57990178-57990197 | None:intergenic | 40.0% | |
| TCTGCGGAAACATATGTTGT+GGG | - | chr7.4:57993942-57993961 | None:intergenic | 40.0% | |
| TTCTTAGAGATCGGTTAACG+AGG | - | chr7.4:57991600-57991619 | None:intergenic | 40.0% | |
| ! | AAAAGTTGTGGTGTTGGGTT+TGG | + | chr7.4:57990541-57990560 | MS.gene93246:CDS | 40.0% |
| ! | AAACCCAACACCACAACTTT+TGG | - | chr7.4:57990542-57990561 | None:intergenic | 40.0% |
| ! | AAGGTTTAGGGTTCGAATCT+CGG | + | chr7.4:57991527-57991546 | MS.gene93246:intron | 40.0% |
| ! | ACACCTCACATGTTTGAAGT+TGG | + | chr7.4:57990295-57990314 | MS.gene93246:CDS | 40.0% |
| ! | ACCTCACATGTTTGAAGTTG+GGG | + | chr7.4:57990297-57990316 | MS.gene93246:CDS | 40.0% |
| ! | CACCTCACATGTTTGAAGTT+GGG | + | chr7.4:57990296-57990315 | MS.gene93246:CDS | 40.0% |
| ! | GGAGTATCATAGGAGACATA+AGG | + | chr7.4:57990493-57990512 | MS.gene93246:CDS | 40.0% |
| ! | GGATTTTGAATTCTCTTGGG+AGG | - | chr7.4:57991703-57991722 | None:intergenic | 40.0% |
| !! | AGAAAACCGAGCATCGATAA+TGG | + | chr7.4:57993828-57993847 | MS.gene93246:CDS | 40.0% |
| !! | GACAATATGTTGATGGTTGG+TGG | + | chr7.4:57993684-57993703 | MS.gene93246:intron | 40.0% |
| !! | TATTTTGAGGATGTGAGTGG+TGG | + | chr7.4:57990329-57990348 | MS.gene93246:CDS | 40.0% |
| !! | TTCAAAGGCACCAAAAGTTG+TGG | + | chr7.4:57990529-57990548 | MS.gene93246:CDS | 40.0% |
| !! | TTTACGTTTGGTGTTGGATG+TGG | + | chr7.4:57991196-57991215 | MS.gene93246:intron | 40.0% |
| !!! | GGTTTTACTTGGTGTAGTAG+TGG | + | chr7.4:57990074-57990093 | MS.gene93246:CDS | 40.0% |
| AAACATGTGAGGTGTGGATC+AGG | - | chr7.4:57990290-57990309 | None:intergenic | 45.0% | |
| AAAGGAGGATATTGTGGTGG+TGG | + | chr7.4:57990383-57990402 | MS.gene93246:CDS | 45.0% | |
| AAGAGCTCCCATGATTCTGT+TGG | + | chr7.4:57992731-57992750 | MS.gene93246:CDS | 45.0% | |
| AGAGCTCCCATGATTCTGTT+GGG | + | chr7.4:57992732-57992751 | MS.gene93246:CDS | 45.0% | |
| GATTCTGTCAACAGTGTAGC+AGG | + | chr7.4:57990570-57990589 | MS.gene93246:CDS | 45.0% | |
| GCACCAAAAGTTGTGGTGTT+GGG | + | chr7.4:57990536-57990555 | MS.gene93246:CDS | 45.0% | |
| GCTTGTCAACTGAGTTAACG+AGG | - | chr7.4:57991489-57991508 | None:intergenic | 45.0% | |
| GTACTACTACTGGTACTGCA+TGG | + | chr7.4:57990099-57990118 | MS.gene93246:CDS | 45.0% | |
| GTCTGCGGAAACATATGTTG+TGG | - | chr7.4:57993943-57993962 | None:intergenic | 45.0% | |
| TAGACCTGCTTCATTACGGT+TGG | - | chr7.4:57990174-57990193 | None:intergenic | 45.0% | |
| TCCCCAACTTCAAACATGTG+AGG | - | chr7.4:57990301-57990320 | None:intergenic | 45.0% | |
| TGCAACAATCTTACCCTGTG+AGG | - | chr7.4:57992765-57992784 | None:intergenic | 45.0% | |
| ! | CATGTTTGAAGTTGGGGAAG+AGG | + | chr7.4:57990303-57990322 | MS.gene93246:CDS | 45.0% |
| ! | GACTGATTCATGGCTTTCAC+CGG | + | chr7.4:57993759-57993778 | MS.gene93246:CDS | 45.0% |
| ! | GGCGGAGACTGAATTGTTTT+CGG | - | chr7.4:57990150-57990169 | None:intergenic | 45.0% |
| ! | TGTCATCTCGGACTGATTCA+TGG | + | chr7.4:57993749-57993768 | MS.gene93246:CDS | 45.0% |
| !! | ATTTTAGAGGCCTCGGTCAA+AGG | + | chr7.4:57992502-57992521 | MS.gene93246:intron | 45.0% |
| !! | CGTGGCATTGATGAATGCTA+AGG | + | chr7.4:57990472-57990491 | MS.gene93246:CDS | 45.0% |
| !!! | GGGGAAGAGGCATTATTTTG+AGG | + | chr7.4:57990316-57990335 | MS.gene93246:CDS | 45.0% |
| !!! | TAATTTTTTTTTAATAAATG+AGG | + | chr7.4:57990640-57990659 | MS.gene93246:intron | 5.0% |
| !!! | TATTTTTTATTTATGTTTTA+GGG | + | chr7.4:57992564-57992583 | MS.gene93246:intron | 5.0% |
| !!! | TTATTTTTTATTTATGTTTT+AGG | + | chr7.4:57992563-57992582 | MS.gene93246:intron | 5.0% |
| ACCTGCTTCATTACGGTTGG+CGG | - | chr7.4:57990171-57990190 | None:intergenic | 50.0% | |
| AGTTGTAGAAGGAGACTGGC+AGG | + | chr7.4:57992689-57992708 | MS.gene93246:CDS | 50.0% | |
| ATGTACCTGCCTCAGAACGA+AGG | + | chr7.4:57990206-57990225 | MS.gene93246:CDS | 50.0% | |
| CCATGCCGTGGAAGATTACA+AGG | + | chr7.4:57993891-57993910 | MS.gene93246:CDS | 50.0% | |
| CCTTGTAATCTTCCACGGCA+TGG | - | chr7.4:57993894-57993913 | None:intergenic | 50.0% | |
| GCCTAGCCATTATCGATGCT+CGG | - | chr7.4:57993837-57993856 | None:intergenic | 50.0% | |
| GGCACCAAAAGTTGTGGTGT+TGG | + | chr7.4:57990535-57990554 | MS.gene93246:CDS | 50.0% | |
| GGGAAAGGAGGATATTGTGG+TGG | + | chr7.4:57990380-57990399 | MS.gene93246:CDS | 50.0% | |
| GTTGGGAGGAATTCCTCACA+GGG | + | chr7.4:57992749-57992768 | MS.gene93246:CDS | 50.0% | |
| GTTGTAGAAGGAGACTGGCA+GGG | + | chr7.4:57992690-57992709 | MS.gene93246:CDS | 50.0% | |
| TGTTGGGAGGAATTCCTCAC+AGG | + | chr7.4:57992748-57992767 | MS.gene93246:CDS | 50.0% | |
| TTTGAGGATGTGAGTGGTGG+TGG | + | chr7.4:57990332-57990351 | MS.gene93246:CDS | 50.0% | |
| ! | CGACAGTATCGGAGTGCATA+CGG | + | chr7.4:57990236-57990255 | MS.gene93246:CDS | 50.0% |
| ! | TGACAAGGTGTCAGGTGGAT+GGG | + | chr7.4:57990444-57990463 | MS.gene93246:CDS | 50.0% |
| !! | AAAAATGTGGTGGTGGGGAG+TGG | + | chr7.4:57992621-57992640 | MS.gene93246:intron | 50.0% |
| !! | ACCGAGCATCGATAATGGCT+AGG | + | chr7.4:57993833-57993852 | MS.gene93246:CDS | 50.0% |
| !! | GAGGATATTGTGGTGGTGGT+GGG | + | chr7.4:57990387-57990406 | MS.gene93246:CDS | 50.0% |
| AAGGCGACGGACGACAGTAT+CGG | + | chr7.4:57990225-57990244 | MS.gene93246:CDS | 55.0% | |
| CAGCACTGCATCTTACGGAG+AGG | - | chr7.4:57993789-57993808 | None:intergenic | 55.0% | |
| CATCTTACGGAGAGGTCAGC+CGG | - | chr7.4:57993781-57993800 | None:intergenic | 55.0% | |
| GCTCCCATGATTCTGTTGGG+AGG | + | chr7.4:57992735-57992754 | MS.gene93246:CDS | 55.0% | |
| GCTGGGGAGAAGAAAGGGAA+AGG | + | chr7.4:57990365-57990384 | MS.gene93246:CDS | 55.0% | |
| GGGGAGAAGAAAGGGAAAGG+AGG | + | chr7.4:57990368-57990387 | MS.gene93246:CDS | 55.0% | |
| GTGGTTATACGGCGGTGACA+AGG | + | chr7.4:57990429-57990448 | MS.gene93246:CDS | 55.0% | |
| TATCGGAGTGCATACGGTGG+AGG | + | chr7.4:57990242-57990261 | MS.gene93246:CDS | 55.0% | |
| TCAGGTGGATGGGTGTAACG+TGG | + | chr7.4:57990454-57990473 | MS.gene93246:CDS | 55.0% | |
| TGCTTCATTACGGTTGGCGG+CGG | - | chr7.4:57990168-57990187 | None:intergenic | 55.0% | |
| ! | ATACGGTGGAGGTGTGTCTC+GGG | + | chr7.4:57990253-57990272 | MS.gene93246:CDS | 55.0% |
| ! | CAGTATCGGAGTGCATACGG+TGG | + | chr7.4:57990239-57990258 | MS.gene93246:CDS | 55.0% |
| ! | CATACGGTGGAGGTGTGTCT+CGG | + | chr7.4:57990252-57990271 | MS.gene93246:CDS | 55.0% |
| ! | GTGACAAGGTGTCAGGTGGA+TGG | + | chr7.4:57990443-57990462 | MS.gene93246:CDS | 55.0% |
| ! | GTGGTGGGGAGTGGTTCTTT+AGG | + | chr7.4:57992630-57992649 | MS.gene93246:intron | 55.0% |
| !! | AGGATGTGAGTGGTGGTGGT+GGG | + | chr7.4:57990336-57990355 | MS.gene93246:CDS | 55.0% |
| !! | GGAGGATATTGTGGTGGTGG+TGG | + | chr7.4:57990386-57990405 | MS.gene93246:CDS | 55.0% |
| !! | TTGTGGTGGTGGTGGGAAGA+CGG | + | chr7.4:57990394-57990413 | MS.gene93246:CDS | 55.0% |
| CGGTTAACGAGGCTGCTCAC+AGG | - | chr7.4:57991589-57991608 | None:intergenic | 60.0% | |
| CTGCCTCAGAACGAAGGCGA+CGG | + | chr7.4:57990212-57990231 | MS.gene93246:CDS | 60.0% | |
| GCATTTGCAGCACCATGCCG+TGG | + | chr7.4:57993879-57993898 | MS.gene93246:CDS | 60.0% | |
| GCCGCCAACCGTAATGAAGC+AGG | + | chr7.4:57990167-57990186 | MS.gene93246:CDS | 60.0% | |
| ! | GGCTGGCTGGGGAGAAGAAA+GGG | + | chr7.4:57990360-57990379 | MS.gene93246:CDS | 60.0% |
| ! | TACGGCGGTGACAAGGTGTC+AGG | + | chr7.4:57990436-57990455 | MS.gene93246:CDS | 60.0% |
| ! | TACGGTGGAGGTGTGTCTCG+GGG | + | chr7.4:57990254-57990273 | MS.gene93246:CDS | 60.0% |
| !! | ATGTGAGTGGTGGTGGTGGG+GGG | + | chr7.4:57990339-57990358 | MS.gene93246:CDS | 60.0% |
| !! | GAGGATGTGAGTGGTGGTGG+TGG | + | chr7.4:57990335-57990354 | MS.gene93246:CDS | 60.0% |
| !! | GATGTGAGTGGTGGTGGTGG+GGG | + | chr7.4:57990338-57990357 | MS.gene93246:CDS | 60.0% |
| !! | GGATGTGAGTGGTGGTGGTG+GGG | + | chr7.4:57990337-57990356 | MS.gene93246:CDS | 60.0% |
| !! | GGCGGTGGTGGGTGGTTATA+CGG | + | chr7.4:57990418-57990437 | MS.gene93246:CDS | 60.0% |
| !! | GGTGGTGGGTGGTTATACGG+CGG | + | chr7.4:57990421-57990440 | MS.gene93246:CDS | 60.0% |
| CGTCCGTCGCCTTCGTTCTG+AGG | - | chr7.4:57990218-57990237 | None:intergenic | 65.0% | |
| ! | GGCGGTGACAAGGTGTCAGG+TGG | + | chr7.4:57990439-57990458 | MS.gene93246:CDS | 65.0% |
| !! | CGTCGCCTTCGTTCTGAGGC+AGG | - | chr7.4:57990214-57990233 | None:intergenic | 65.0% |
| !! | GGGCTGGCTGGGGAGAAGAA+AGG | + | chr7.4:57990359-57990378 | MS.gene93246:CDS | 65.0% |
| !! | TGGTGGTGGTGGGAAGACGG+CGG | + | chr7.4:57990397-57990416 | MS.gene93246:CDS | 65.0% |
| !! | TGGTGGTGGGAAGACGGCGG+CGG | + | chr7.4:57990400-57990419 | MS.gene93246:CDS | 70.0% |
| GGGAAGACGGCGGCGGTGGT+GGG | + | chr7.4:57990407-57990426 | MS.gene93246:CDS | 75.0% | |
| TGGGAAGACGGCGGCGGTGG+TGG | + | chr7.4:57990406-57990425 | MS.gene93246:CDS | 75.0% | |
| TGGTGGGAAGACGGCGGCGG+TGG | + | chr7.4:57990403-57990422 | MS.gene93246:CDS | 75.0% | |
| !! | AAGACGGCGGCGGTGGTGGG+TGG | + | chr7.4:57990410-57990429 | MS.gene93246:CDS | 75.0% |
| !! | GAGTGGTGGTGGTGGGGGGC+TGG | + | chr7.4:57990343-57990362 | MS.gene93246:CDS | 75.0% |
| !! | GTGGTGGTGGGGGGCTGGCT+GGG | + | chr7.4:57990348-57990367 | MS.gene93246:CDS | 75.0% |
| !! | TGGTGGTGGGGGGCTGGCTG+GGG | + | chr7.4:57990349-57990368 | MS.gene93246:CDS | 75.0% |
| !!! | GGTGGTGGTGGGGGGCTGGC+TGG | + | chr7.4:57990347-57990366 | MS.gene93246:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 57989999 | 57993969 | 57989999 | ID=MS.gene93246 |
| chr7.4 | mRNA | 57989999 | 57993969 | 57989999 | ID=MS.gene93246.t1;Parent=MS.gene93246 |
| chr7.4 | exon | 57989999 | 57990591 | 57989999 | ID=MS.gene93246.t1.exon1;Parent=MS.gene93246.t1 |
| chr7.4 | CDS | 57989999 | 57990591 | 57989999 | ID=cds.MS.gene93246.t1;Parent=MS.gene93246.t1 |
| chr7.4 | exon | 57992652 | 57992770 | 57992652 | ID=MS.gene93246.t1.exon2;Parent=MS.gene93246.t1 |
| chr7.4 | CDS | 57992652 | 57992770 | 57992652 | ID=cds.MS.gene93246.t1;Parent=MS.gene93246.t1 |
| chr7.4 | exon | 57993728 | 57993969 | 57993728 | ID=MS.gene93246.t1.exon3;Parent=MS.gene93246.t1 |
| chr7.4 | CDS | 57993728 | 57993969 | 57993728 | ID=cds.MS.gene93246.t1;Parent=MS.gene93246.t1 |
| Gene Sequence |
| Protein sequence |
