AlfalfaGEDB | MS.gene93871

M. sativa cultivar XinJiangDaYe / MS.gene93871

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00514.26 PF00651.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93871.t1	XP_003592432.1	99.3	704	5	0	1	704	1	704	2.80E-263	917.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93871.t1	B9DHT4	80.6	701	132	2	4	702	6	704	3.3e-188	659.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93871.t1	G7IE13	99.3	704	5	0	1	704	1	704	2.0e-263	917.9

TFs/TRs:

Gene ID	Type	Classification
MS.gene93871.t1	TR	TRAF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050084	MS.gene93871	0.805249	1.46E-49	-1.69E-46
MS.gene050085	MS.gene93871	0.801503	8.73E-49	-1.69E-46
MS.gene055547	MS.gene93871	0.801735	7.83E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene045983	MS.gene93871	PPI
MS.gene042713	MS.gene93871	PPI
MS.gene053945	MS.gene93871	PPI
MS.gene93871	MS.gene78758	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93871.t1	MTR_1g104870	99.290	704	5	0	1	704	1	704	0.0	1427
MS.gene93871.t1	MTR_5g005940	84.848	693	103	1	12	702	7	699	0.0	1172
MS.gene93871.t1	MTR_5g005940	85.836	586	81	1	12	595	7	592	0.0	999
MS.gene93871.t1	MTR_7g094910	63.490	682	241	4	18	698	11	685	0.0	845
MS.gene93871.t1	MTR_7g094900	67.045	616	198	3	84	698	93	704	0.0	832
MS.gene93871.t1	MTR_7g094910	65.049	618	208	4	18	634	11	621	0.0	779
MS.gene93871.t1	MTR_3g008350	25.769	520	315	18	18	519	7	473	2.50e-20	95.5
MS.gene93871.t1	MTR_1g012360	27.436	390	251	13	137	508	104	479	2.38e-19	92.8
MS.gene93871.t1	MTR_1g018180	26.400	250	176	3	295	536	74	323	2.80e-16	81.3
MS.gene93871.t1	MTR_7g094490	30.675	163	93	3	517	664	187	344	3.89e-16	81.6
MS.gene93871.t1	MTR_3g466220	30.978	184	125	2	194	377	528	709	3.87e-15	79.7
MS.gene93871.t1	MTR_3g466220	30.978	184	125	2	194	377	549	730	4.18e-15	79.7
MS.gene93871.t1	MTR_1g072650	30.488	164	90	4	519	664	191	348	1.00e-14	77.4
MS.gene93871.t1	MTR_1g012360	25.272	368	246	11	137	487	104	459	6.93e-14	75.1
MS.gene93871.t1	MTR_1g012360	25.208	361	241	11	137	480	104	452	1.71e-13	73.9
MS.gene93871.t1	MTR_5g087500	25.510	196	124	6	524	700	183	375	1.74e-12	70.5
MS.gene93871.t1	MTR_3g069000	31.915	141	78	2	539	664	58	195	2.22e-12	68.9
MS.gene93871.t1	MTR_5g087500	29.560	159	91	5	524	663	183	339	2.30e-12	69.3
MS.gene93871.t1	MTR_5g087500	29.560	159	91	5	524	663	183	339	2.51e-12	69.3
MS.gene93871.t1	MTR_4g063800	30.769	195	131	4	198	391	353	544	5.06e-12	69.7
MS.gene93871.t1	MTR_7g097020	28.270	237	161	4	175	411	465	692	7.45e-12	69.3
MS.gene93871.t1	MTR_4g131510	24.138	319	217	10	59	372	47	345	2.50e-11	67.0
MS.gene93871.t1	MTR_1g094215	30.928	194	132	2	198	391	162	353	7.14e-11	65.5
MS.gene93871.t1	MTR_1g094215	30.928	194	132	2	198	391	345	536	7.93e-11	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene93871.t1	AT5G19330	78.887	701	144	2	4	702	6	704	0.0	1094
MS.gene93871.t1	AT5G19330	73.077	650	116	7	4	645	6	604	0.0	872
MS.gene93871.t1	AT5G13060	61.970	660	249	2	39	697	68	726	0.0	833
MS.gene93871.t1	AT3G06190	31.461	178	100	4	522	681	182	355	1.41e-17	85.5
MS.gene93871.t1	AT3G06190	31.677	161	89	3	522	664	182	339	2.18e-16	82.4
MS.gene93871.t1	AT5G19000	29.114	158	97	2	522	664	183	340	6.83e-14	74.7
MS.gene93871.t1	AT5G19000	29.114	158	97	2	522	664	183	340	6.83e-14	74.7
MS.gene93871.t1	AT3G03740	27.778	180	112	3	533	696	210	387	9.90e-14	74.7
MS.gene93871.t1	AT2G23140	30.978	184	125	2	194	377	539	720	1.37e-13	75.1
MS.gene93871.t1	AT2G23140	30.978	184	125	2	194	377	539	720	1.37e-13	75.1
MS.gene93871.t1	AT2G23140	30.978	184	125	2	194	377	542	723	1.50e-13	74.7
MS.gene93871.t1	AT1G23030	25.798	376	236	9	140	509	272	610	1.70e-13	74.3
MS.gene93871.t1	AT2G23140	30.978	184	125	2	194	377	350	531	2.56e-13	73.9
MS.gene93871.t1	AT2G23140	30.978	184	125	2	194	377	350	531	2.56e-13	73.9
MS.gene93871.t1	AT3G46510	26.502	283	173	6	198	480	354	601	2.64e-13	73.9
MS.gene93871.t1	AT3G43700	34.014	147	78	4	539	667	205	350	2.99e-13	72.4
MS.gene93871.t1	AT3G43700	34.014	147	78	4	539	667	205	350	3.05e-13	72.4
MS.gene93871.t1	AT3G43700	34.014	147	78	4	539	667	205	350	4.09e-13	72.4
MS.gene93871.t1	AT4G02150	25.407	307	202	11	72	372	139	424	4.93e-13	72.8
MS.gene93871.t1	AT3G01400	26.147	218	145	4	290	495	73	286	1.35e-12	70.1
MS.gene93871.t1	AT5G67340	25.714	280	185	7	146	411	364	634	1.86e-12	71.2
MS.gene93871.t1	AT5G67340	25.714	280	185	7	146	411	364	634	1.86e-12	71.2
MS.gene93871.t1	AT5G58680	25.229	218	151	3	288	495	69	284	3.66e-12	68.9
MS.gene93871.t1	AT4G02150	25.172	290	191	10	72	356	139	407	3.68e-12	69.3
MS.gene93871.t1	AT2G39760	31.429	140	78	2	540	664	195	331	4.74e-11	65.9
MS.gene93871.t1	AT3G06720	22.500	320	221	9	59	372	123	421	4.80e-11	66.2
MS.gene93871.t1	AT3G06720	22.500	320	221	9	59	372	123	421	4.80e-11	66.2
MS.gene93871.t1	AT2G39760	31.429	140	78	2	540	664	195	331	6.13e-11	65.1
MS.gene93871.t1	AT2G39760	31.429	140	78	2	540	664	195	331	7.52e-11	64.7
MS.gene93871.t1	AT2G39760	31.429	140	78	2	540	664	195	331	7.52e-11	64.7

Find 145 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAACTTCCCATCTAATATT+TGG	0.076983	1.2:-77832496	None:intergenic
GCCGCTTCCCTCTGACTTTC+AGG	0.083665	1.2:-77828337	None:intergenic
GGTGCTTTACAACCAGTTAT+TGG	0.256939	1.2:+77828111	MS.gene93871:CDS
AGACAGGGCCGAGGCTTTAT+TGG	0.273094	1.2:-77831004	None:intergenic
TGCCTTTGCATTGGGGAGAT+TGG	0.285881	1.2:+77828937	MS.gene93871:CDS
TCACTGCAGATTACAGTCTA+TGG	0.287035	1.2:-77833578	None:intergenic
TGCATGCATTCTTTATATCT+TGG	0.297379	1.2:+77832944	MS.gene93871:CDS
AGAACCTCTTTCTTTATATT+CGG	0.303887	1.2:-77828081	None:intergenic
AAAGGGAGTGCTTTCGCATT+AGG	0.305562	1.2:+77825552	MS.gene93871:CDS
CCTACGAATGAGACTATTAA+TGG	0.310848	1.2:-77827504	None:intergenic
TCCACCACTTGTTCATTTGC+TGG	0.314607	1.2:+77827680	MS.gene93871:CDS
CAATGTTTGATGGTGGTTAT+AGG	0.316662	1.2:+77832086	MS.gene93871:CDS
ATAATGTGTCGGATTTCATT+AGG	0.317549	1.2:+77830227	MS.gene93871:CDS
AAACTTCCCATCTAATATTT+GGG	0.326330	1.2:-77832495	None:intergenic
CTTGTCTCAGGATATATTAC+TGG	0.328165	1.2:+77832863	MS.gene93871:intron
CAAGACATTGAAAAGATTAG+AGG	0.333836	1.2:+77830508	MS.gene93871:CDS
TAGAGATCCCAAATATTAGA+TGG	0.348876	1.2:+77832488	MS.gene93871:CDS
AAGAAAGAGGTTCTATTTGC+TGG	0.352180	1.2:+77828090	MS.gene93871:CDS
TGTGGAAGGAGGTGCGATTC+CGG	0.359310	1.2:+77825452	MS.gene93871:CDS
GCATCCAGATTTATATATAC+TGG	0.370319	1.2:+77832624	MS.gene93871:intron
GAAATGTCTGCCTTTGCATT+GGG	0.370822	1.2:+77828929	MS.gene93871:CDS
TCTCGTCGAAGTTGCTAATC+AGG	0.372235	1.2:+77825236	MS.gene93871:CDS
AGCACCATCAAGTTGCTGTT+TGG	0.377790	1.2:-77830962	None:intergenic
TACCTAAGTAATCCAATAAC+TGG	0.378852	1.2:-77828123	None:intergenic
TTCTGAACGCAATCAGTAAC+AGG	0.383768	1.2:-77825501	None:intergenic
AGAAGGTCTTGAGCAATATC+TGG	0.388231	1.2:-77832663	None:intergenic
CCTCAATGATAATGCATTGA+AGG	0.391244	1.2:-77832919	None:intergenic
GACGAGATCTGACGGTCTTC+CGG	0.398909	1.2:-77825180	None:intergenic
AAATGATGAAAATAAAATTC+AGG	0.399085	1.2:+77827764	MS.gene93871:CDS
GAAGGAGGAGCGGCGTCTAC+AGG	0.402577	1.2:-77831027	None:intergenic
ATTCTTCTTTGATCATCTGC+AGG	0.411866	1.2:-77830772	None:intergenic
CCGCTTCCCTCTGACTTTCA+GGG	0.417129	1.2:-77828336	None:intergenic
ACAAAGTAATTGCGGATCTC+TGG	0.420288	1.2:-77833531	None:intergenic
ACAATTAGTTGTTGATGTTC+CGG	0.420661	1.2:-77827413	None:intergenic
TAATGTGTCGGATTTCATTA+GGG	0.421529	1.2:+77830228	MS.gene93871:CDS
AGGGAAGCGGCATTGTTACT+TGG	0.426859	1.2:+77828349	MS.gene93871:CDS
AGCTCCAAACAGCAACTTGA+TGG	0.434657	1.2:+77830958	MS.gene93871:CDS
GCATTTCGTGCAATGTTTGA+TGG	0.440899	1.2:+77832076	MS.gene93871:CDS
TAAGTTAGACGAAGAATTAC+CGG	0.441802	1.2:+77825161	MS.gene93871:CDS
AATGTTTGATGGTGGTTATA+GGG	0.449011	1.2:+77832087	MS.gene93871:CDS
TTCTCAACTTCATGCTCAAA+CGG	0.449415	1.2:-77825531	None:intergenic
AAGATCAACAAGGTGTGTTA+AGG	0.453328	1.2:-77827447	None:intergenic
AGAAATGTCTGCCTTTGCAT+TGG	0.459751	1.2:+77828928	MS.gene93871:CDS
ATCAAGTTGCTGTTTGGAGC+TGG	0.459757	1.2:-77830956	None:intergenic
TGCATTGGGGAGATTGGCCC+AGG	0.465694	1.2:+77828943	MS.gene93871:CDS
ATTTCTCTAAGTTGTACATC+AGG	0.465886	1.2:-77828911	None:intergenic
GAGCGGCGTCTACAGGAGAC+AGG	0.489511	1.2:-77831020	None:intergenic
CATGAGAGGCAAACCTGACA+TGG	0.490179	1.2:-77827577	None:intergenic
CTCGCCGATCTCGCGAAGAA+TGG	0.492122	1.2:+77825330	MS.gene93871:CDS
TCACTGCCTCTCCGAGAGGA+AGG	0.495947	1.2:+77825128	MS.gene93871:CDS
ACTGCCTCTCCGAGAGGAAG+GGG	0.496118	1.2:+77825130	MS.gene93871:CDS
TCTCGGAGAGGCAGTGACCT+TGG	0.498509	1.2:-77825122	None:intergenic
TGCTCATAGAATATGTCTAC+TGG	0.499097	1.2:+77832042	MS.gene93871:CDS
TTTGAGCATGAAGTTGAGAA+AGG	0.499940	1.2:+77825534	MS.gene93871:CDS
GTATTACAGGTTGGTGTGAT+CGG	0.500755	1.2:+77828039	MS.gene93871:intron
ATCTTATGCGAGTTTCAGAA+AGG	0.503114	1.2:+77830707	MS.gene93871:CDS
GCAACATTAAAACCCATGTC+AGG	0.505215	1.2:+77827564	MS.gene93871:CDS
TTCTTCTTACAGGTTTACTT+AGG	0.509350	1.2:+77831824	MS.gene93871:intron
TCTTATGCGAGTTTCAGAAA+GGG	0.510889	1.2:+77830708	MS.gene93871:CDS
TTTACCATTCTTCGCGAGAT+CGG	0.511331	1.2:-77825334	None:intergenic
TTTCTGTGTAGGATGGAAGG+TGG	0.512896	1.2:+77827654	MS.gene93871:intron
TTATGGCCTTGCAGAGAATG+AGG	0.514595	1.2:+77829399	MS.gene93871:CDS
CCATTAATAGTCTCATTCGT+AGG	0.517559	1.2:+77827504	MS.gene93871:CDS
AGATTACAGTCTATGGGAGT+TGG	0.519743	1.2:-77833571	None:intergenic
GCACGTTCGTCGGCGGTAGG+CGG	0.520168	1.2:-77825207	None:intergenic
CCCTGAAAGTCAGAGGGAAG+CGG	0.523107	1.2:+77828336	MS.gene93871:CDS
ATTGATCAGCTGCTCGAAGA+AGG	0.530249	1.2:-77832680	None:intergenic
CACTGCCTCTCCGAGAGGAA+GGG	0.532570	1.2:+77825129	MS.gene93871:CDS
TTGAGCATGAAGTTGAGAAA+GGG	0.538121	1.2:+77825535	MS.gene93871:CDS
ATCTCCGAATATAAAGAAAG+AGG	0.539197	1.2:+77828077	MS.gene93871:CDS
ATTAGGACTTCTCGCCGTCA+AGG	0.543293	1.2:+77825569	MS.gene93871:CDS
TGCTGTGGCTTTATGCAAGT+TGG	0.544148	1.2:+77830981	MS.gene93871:CDS
TTCTTCTTTGATCATCTGCA+GGG	0.544161	1.2:-77830771	None:intergenic
CCTTCAATGCATTATCATTG+AGG	0.544504	1.2:+77832919	MS.gene93871:CDS
TGAAGATGCTTAATCAAAGC+CGG	0.546672	1.2:-77825471	None:intergenic
GAGAAGTGCCGCACGTTCGT+CGG	0.547594	1.2:-77825217	None:intergenic
TCGGATTTCATTAGGGTAGG+TGG	0.548232	1.2:+77830235	MS.gene93871:CDS
AACCAGTTATTGGATTACTT+AGG	0.550875	1.2:+77828121	MS.gene93871:CDS
TCCTCCTTCTCCAACACCAC+AGG	0.551268	1.2:+77831041	MS.gene93871:CDS
ACCTGTGGTGTTGGAGAAGG+AGG	0.552899	1.2:-77831042	None:intergenic
ATAAGTTGAGCGCGAGGCAA+GGG	0.555428	1.2:+77832976	MS.gene93871:CDS
CACTGCAGATTACAGTCTAT+GGG	0.555635	1.2:-77833577	None:intergenic
TCCAGCAAATGAACAAGTGG+TGG	0.556965	1.2:-77827681	None:intergenic
CGCAGCATTAGAATCAGAGT+CGG	0.557692	1.2:-77827887	None:intergenic
CATTGTGTGCAATACCAGCT+TGG	0.557922	1.2:-77829303	None:intergenic
AAGGTGCAAAGAGCAGCTGC+TGG	0.559222	1.2:+77827717	MS.gene93871:CDS
GAGCTTTAACAAAGTAATTG+CGG	0.561626	1.2:-77833539	None:intergenic
TTCCCCACAGGATAATGTGT+CGG	0.562985	1.2:+77830216	MS.gene93871:intron
GCTGGAATTTGCTGATACAA+AGG	0.566935	1.2:+77827698	MS.gene93871:CDS
AGATTAGAGGAGAAGATTCA+CGG	0.568629	1.2:+77830521	MS.gene93871:CDS
GGAAGTGGTGAATGTGATTG+TGG	0.575329	1.2:+77825434	MS.gene93871:CDS
CTTGAACCTACCTGTGGTGT+TGG	0.575698	1.2:-77831051	None:intergenic
CTTATGCGAGTTTCAGAAAG+GGG	0.578222	1.2:+77830709	MS.gene93871:CDS
ATCATACCTCATTCTCTGCA+AGG	0.581209	1.2:-77829405	None:intergenic
ATGAGTAGCACGCTTAGCCG+CGG	0.581562	1.2:-77825304	None:intergenic
GCCGCACGTTCGTCGGCGGT+AGG	0.583158	1.2:-77825210	None:intergenic
CACGCTGCCCTGAAAGTCAG+AGG	0.583183	1.2:+77828329	MS.gene93871:CDS
GATAAGTTGAGCGCGAGGCA+AGG	0.584876	1.2:+77832975	MS.gene93871:CDS
AGAGATCCCAAATATTAGAT+GGG	0.587179	1.2:+77832489	MS.gene93871:CDS
CAAGTTGGCCAATAAAGCCT+CGG	0.587308	1.2:+77830996	MS.gene93871:CDS
CTCGCATAAGATATAACAGA+TGG	0.587389	1.2:-77830696	None:intergenic
TGCTGCTATTCATTATGAAG+CGG	0.591200	1.2:+77827919	MS.gene93871:CDS
GACGAAAGCATCTCTATCAA+AGG	0.592011	1.2:-77828887	None:intergenic
GGAACATCAACAACTAATTG+TGG	0.592529	1.2:+77827415	MS.gene93871:CDS
AGCTACTGATTCAGACTGCA+AGG	0.598009	1.2:+77828381	MS.gene93871:CDS
GTCTACAGGAGACAGGGCCG+AGG	0.599726	1.2:-77831013	None:intergenic
AAGTGCCGCACGTTCGTCGG+CGG	0.602387	1.2:-77825214	None:intergenic
GTGTCGGATTTCATTAGGGT+AGG	0.603157	1.2:+77830232	MS.gene93871:CDS
TTGTGAGTACACAATTGCAC+AGG	0.604109	1.2:+77832728	MS.gene93871:CDS
GGCCAATCTCCCCAATGCAA+AGG	0.606240	1.2:-77828939	None:intergenic
CCTACCTGTGGTGTTGGAGA+AGG	0.607565	1.2:-77831045	None:intergenic
CAGGACACACATAACCAAGC+TGG	0.608709	1.2:+77829289	MS.gene93871:intron
ATGGAGTTTCAGAGACGCCA+AGG	0.609263	1.2:+77825105	MS.gene93871:CDS
GCCTACCGCCGACGAACGTG+CGG	0.610300	1.2:+77825209	MS.gene93871:CDS
ACTTCATGCTCAAACGGCAG+CGG	0.611441	1.2:-77825525	None:intergenic
CATGACAGGAGAAGGATGCA+AGG	0.611719	1.2:+77832461	MS.gene93871:intron
CATTAATAGTCTCATTCGTA+GGG	0.616601	1.2:+77827505	MS.gene93871:CDS
GAGTCAAGAAGCTTGAGCAG+TGG	0.623089	1.2:-77829337	None:intergenic
AAATGTCTGCCTTTGCATTG+GGG	0.623106	1.2:+77828930	MS.gene93871:CDS
AATTCCAGCAAATGAACAAG+TGG	0.624346	1.2:-77827684	None:intergenic
GCTGGTATTGCACACAATGG+TGG	0.625726	1.2:+77829307	MS.gene93871:CDS
ACGCTGCCCTGAAAGTCAGA+GGG	0.634516	1.2:+77828330	MS.gene93871:CDS
GTGGTGAATGTGATTGTGGA+AGG	0.635578	1.2:+77825438	MS.gene93871:CDS
TTTCGTGCAATGTTTGATGG+TGG	0.641730	1.2:+77832079	MS.gene93871:CDS
GGAGTTCAAAGACTACAAGA+AGG	0.642933	1.2:+77830256	MS.gene93871:CDS
GCGGTGCCGACGAGATCTGA+CGG	0.644725	1.2:-77825188	None:intergenic
ACAGCAACTTGATGGTGCTG+TGG	0.647244	1.2:+77830966	MS.gene93871:CDS
AAAGCATCTCTATCAAAGGT+CGG	0.649168	1.2:-77828883	None:intergenic
ATGACAGGAGAAGGATGCAA+GGG	0.650751	1.2:+77832462	MS.gene93871:intron
TGGTGTTGGAGAAGGAGGAG+CGG	0.652625	1.2:-77831037	None:intergenic
TTTGCCCCTTCCTCTCGGAG+AGG	0.654825	1.2:-77825134	None:intergenic
GAATGAAGACGATCGAGCCG+CGG	0.657533	1.2:+77825287	MS.gene93871:CDS
TTCTCGAGTCTACTTTCACG+TGG	0.661326	1.2:+77825265	MS.gene93871:CDS
GTGAATGTGATTGTGGAAGG+AGG	0.669059	1.2:+77825441	MS.gene93871:CDS
ATGAGAGGCAAACCTGACAT+GGG	0.671038	1.2:-77827576	None:intergenic
TAGGTTCACATTGTACAGAG+AGG	0.672210	1.2:+77828854	MS.gene93871:intron
AAGGTCACTGCCTCTCCGAG+AGG	0.690613	1.2:+77825124	MS.gene93871:CDS
AGCGGCGTCTACAGGAGACA+GGG	0.692565	1.2:-77831019	None:intergenic
ACTTTGATAAGTTGAGCGCG+AGG	0.693850	1.2:+77832970	MS.gene93871:CDS
GCCTCTTTAAAAGATCAACA+AGG	0.700661	1.2:-77827457	None:intergenic
CAAGCTGGTATTGCACACAA+TGG	0.700835	1.2:+77829304	MS.gene93871:CDS
GGAAGACCGTCAGATCTCGT+CGG	0.712275	1.2:+77825182	MS.gene93871:CDS
CAACAACTAATTGTGGACAG+TGG	0.718009	1.2:+77827422	MS.gene93871:CDS
TGAACGCAATCAGTAACAGG+CGG	0.719381	1.2:-77825498	None:intergenic
CGTGAAAGTAGACTCGAGAA+CGG	0.732007	1.2:-77825262	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	77825105	77833590	77825105	ID=MS.gene93871
chr1.2	mRNA	77825105	77833590	77825105	ID=MS.gene93871.t1;Parent=MS.gene93871
chr1.2	exon	77825105	77825351	77825105	ID=MS.gene93871.t1.exon1;Parent=MS.gene93871.t1
chr1.2	CDS	77825105	77825351	77825105	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77825433	77825590	77825433	ID=MS.gene93871.t1.exon2;Parent=MS.gene93871.t1
chr1.2	CDS	77825433	77825590	77825433	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77827413	77827585	77827413	ID=MS.gene93871.t1.exon3;Parent=MS.gene93871.t1
chr1.2	CDS	77827413	77827585	77827413	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77827665	77827785	77827665	ID=MS.gene93871.t1.exon4;Parent=MS.gene93871.t1
chr1.2	CDS	77827665	77827785	77827665	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77827866	77827940	77827866	ID=MS.gene93871.t1.exon5;Parent=MS.gene93871.t1
chr1.2	CDS	77827866	77827940	77827866	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77828048	77828142	77828048	ID=MS.gene93871.t1.exon6;Parent=MS.gene93871.t1
chr1.2	CDS	77828048	77828142	77828048	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77828327	77828402	77828327	ID=MS.gene93871.t1.exon7;Parent=MS.gene93871.t1
chr1.2	CDS	77828327	77828402	77828327	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77828857	77828964	77828857	ID=MS.gene93871.t1.exon8;Parent=MS.gene93871.t1
chr1.2	CDS	77828857	77828964	77828857	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77829292	77829420	77829292	ID=MS.gene93871.t1.exon9;Parent=MS.gene93871.t1
chr1.2	CDS	77829292	77829420	77829292	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77830226	77830294	77830226	ID=MS.gene93871.t1.exon10;Parent=MS.gene93871.t1
chr1.2	CDS	77830226	77830294	77830226	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77830488	77830547	77830488	ID=MS.gene93871.t1.exon11;Parent=MS.gene93871.t1
chr1.2	CDS	77830488	77830547	77830488	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77830688	77830811	77830688	ID=MS.gene93871.t1.exon12;Parent=MS.gene93871.t1
chr1.2	CDS	77830688	77830811	77830688	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77830923	77831062	77830923	ID=MS.gene93871.t1.exon13;Parent=MS.gene93871.t1
chr1.2	CDS	77830923	77831062	77830923	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77831836	77831899	77831836	ID=MS.gene93871.t1.exon14;Parent=MS.gene93871.t1
chr1.2	CDS	77831836	77831899	77831836	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77832029	77832108	77832029	ID=MS.gene93871.t1.exon15;Parent=MS.gene93871.t1
chr1.2	CDS	77832029	77832108	77832029	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77832469	77832533	77832469	ID=MS.gene93871.t1.exon16;Parent=MS.gene93871.t1
chr1.2	CDS	77832469	77832533	77832469	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77832632	77832749	77832632	ID=MS.gene93871.t1.exon17;Parent=MS.gene93871.t1
chr1.2	CDS	77832632	77832749	77832632	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77832873	77832997	77832873	ID=MS.gene93871.t1.exon18;Parent=MS.gene93871.t1
chr1.2	CDS	77832873	77832997	77832873	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1
chr1.2	exon	77833503	77833590	77833503	ID=MS.gene93871.t1.exon19;Parent=MS.gene93871.t1
chr1.2	CDS	77833503	77833590	77833503	ID=cds.MS.gene93871.t1;Parent=MS.gene93871.t1

Gene Sequence

>MS.gene93871

ATGGAGTTTCAGAGACGCCAAGGTCACTGCCTCTCCGAGAGGAAGGGGCAAAAACGTAAGTTAGACGAAGAATTACCGGAAGACCGTCAGATCTCGTCGGCACCGCCTACCGCCGACGAACGTGCGGCACTTCTCGTCGAAGTTGCTAATCAGGTCACCGTTCTCGAGTCTACTTTCACGTGGAATGAAGACGATCGAGCCGCGGCTAAGCGTGCTACTCATGCGCTCGCCGATCTCGCGAAGAATGGTAAATCTATGTCTCCGATCTTGTTGAATTGCGCTTGAATTGCATGTGTGTGTGTTAATTTACTGGTGATTTTGTTTGCAGAGGAAGTGGTGAATGTGATTGTGGAAGGAGGTGCGATTCCGGCTTTGATTAAGCATCTTCAAGCACCGCCTGTTACTGATTGCGTTCAGAAGCCGCTGCCGTTTGAGCATGAAGTTGAGAAAGGGAGTGCTTTCGCATTAGGACTTCTCGCCGTCAAGGTAATTTGATTTTTCTTTCTTTATTATCAAATTTGTATGATTCTGGAAAATGAATTGATTGAAGAATTGTTTTATGTTGAATTCAATTATTTAGTTGAGTAGTAGTAGTGCATATTCTTCGAAATGTTATTCAATTTTTGTTATAGCAGTATTATGCAAGTGTAGTAGACATGTTAGAAATGAGAAAAAGAAGTTGGCATATTAGAGTGGGAGGAAAAGTAGCATATTGGAATTTTGTTCTAGTTTTGTTTTGTGCGTTTTAAAATTAGAGCACGACCATACACAAACTTTAAAAAATGTTATATATTTTCATTCTAATATGTTATTTAAAAAATGTTATATATTTTCATTCTAATATGTTATGTTAGTATAAGAGTTTAGCTAAGGAGAGTATAGCAAATTATTCCGTTCTGTTTTATTTTTCCTATTAAACAGGACATACTGTATTGAATGATCTATGTGGAATTTTGAGTTTGTCATATTGGATTTTTTTTTTTTAATCCACAGTTATGTTGTATTCAAGAGGGTGAATGGAAATGTTGTTTTATATCAACATCCACTGTCAGGACTTTCAGTTTTATCTGTTTTGAATGTATTGTTGGATTGTCATATTTCATTCCAGAGAGGATAGATCACTAATGCATGTACTTGGGTAAACATAATATTAAATGAAAAACTGATTTTATAAAATTAATTTGGTTGCAATAGAGTCTGAAGTAAAATGATTAATATTTGCATGTCTTTCCCCTGAAAGTTTGTTTGTTGTAAACTTTGGTGTAAATTTTTTAACCCCATACGGAAATTACTTATTTTTTCACTTCTACTCAAACAGTGGTTTGGAGTCACAATATTTTTTCCTTTTCTGATAGGACCTATTTTAACTGAAATCACATCTGATGTGAAGTGAAATCAATTTTGTTACTCTACTTTGTGAAACAAATTACACTAAATCACAGTGATGAGCCAAGGAAGTGACCATATACAGTCATAATGAAATACAAGGCTTTAGAATTGATTGAATTATGTGAATATTGTATTGTTATTCGTGATAATGTATATGGTTTGCCTTTGTGAATCAATTCCATAAGACATACTGCATCAAGCACCTGCTGGTTGATACGAAACATTTATTGATCAGAATTTTTCTTAATGCCGAACAAGGCACTTACTCTCTCTTAAATTTTATATTTTTCTCTATGCTGTACAAGGCACTTACTCTCTCTTATTTCTCTGAAAAAAAACATATCGGGTTTGGGTGGTTATGTTAGAAAAAAAGAAGTGATGGGGCGACATGAAAGCAACATGTTAAATTTTGAAATGATCACAAATTAAGAGTAAAATCTGAATGCATTGAACAAAAACTAGAAATACTAAGAGAAAAATCCATGGTCAATTAACCAAGCGAAAAAATCAAATGAGTTTTTGGATGACCAATTACGAGATAGTAGATTCTTATAAAATGTTCAATTAAAGTGAATGTCTCTCATAGGTTTAAATAATAAATTGGGTGGTCTGGTCCGTGACTACGGTGAGGGTGTCTCTTGCTATGGGATTTTAGAGTTCTAAACATTCATGTATGTACGCTGTTATGCCAATTACATGATTGATTTTTGCTTTGGTTATGAGATGTGAATTGAGTAGAATGTGATTTCCTTTATCAATTCACTTGTCAACATCCTCCATGATGAGGACCTTGTCACTTTTTCGCCATACTTTGTATTATATATATGGCATATATCATATATTCCATTTAACTTTTAGCTGCCCTTTAAAAAAAGATATAATTGTCCAGCTAACGTCTTATTTGAAATGCTTTCTACAGCCGGAACATCAACAACTAATTGTGGACAGTGGTGCCTTAACACACCTTGTTGATCTTTTAAAGAGGCATAATAATGGTTTGACTTCTCGTGCCATTAATAGTCTCATTCGTAGGGCTGCAGATGCTGTTACTAATCTCGCACATGAGAATAGCAACATTAAAACCCATGTCAGGTTTGCCTCTCATGCACGATTGTATATTTAGACTCAGTTTGGATTTTTTTTCTTAACATTATATGGATTTTCTGTGTAGGATGGAAGGTGGAATTCCACCACTTGTTCATTTGCTGGAATTTGCTGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCACTGCGAACTCTAGCTTTTAAAAATGATGAAAATAAAATTCAGGTAGGCAGTGGTCATTGTTGAAAGTTGAGTTTTGAATATGATAATTAGTTACATACTTACATAACATGATGATTTGCCAGATTGTTGAATGTGATGCTCTTCCGACTCTGATTCTAATGCTGCGTTCTGAAGATGCTGCTATTCATTATGAAGCGGTATGGATAAGGAAACCGTAATGATAAATTTTAGGTTTTGCAATAATTTTGAGCTGTCTATATACATCTCTCATCTGGCATATGCAATGAATTGGATTGTATTACAGGTTGGTGTGATCGGAAATTTAGTTCACTCATCTCCGAATATAAAGAAAGAGGTTCTATTTGCTGGTGCTTTACAACCAGTTATTGGATTACTTAGGTATAATATCAGCTCTGGACTCAATTATTGCCGGGCCCATTCTATTGCATTTCCCCTTCCCTCTCCCCGTATCTTGAATTTGTTTATATGCCCAATTTTTTTGTTTCTTGACAATAATTTCTGTGATTTATAACTAAATCAACATGTTTCAATTAATGCATTCTAATAATGTTTCTTTTAATAGCTCACGCTGCCCTGAAAGTCAGAGGGAAGCGGCATTGTTACTTGGACAGTTTGCAGCTACTGATTCAGACTGCAAGGTAAGGATAAACTTCACAACCGGAAGGGATAGTGGAAAATTTTAGTTAGGAGTAATTTTTCAAAATCTCCAAGTCAAACTTTCAAGTTTGGTTCATTTTCTTTTATTGTTTATTTTTGTACTTGTACTTGAGGGGTAAAGAGAGAGTTAAGCTGGGACGAATCCCTCACTTCACTTTTATGGTTGTTTCTTGAGTAGTTAAGAGAGATGGAAAGAACAGAATCAACAGCATACCTTTTTTTTGTTGAATAAAACAACTGAACATTAGTTGGGGGTAACTGTTCACCAACTACAATTCCATGTTTGGTTGTTTTGTATTATTTACATTTTGCTAAAATAACAACTCCATGGTTCTAGAATAGTTGATTATATAGGTGCTACTCCTGTGATGGTACATCATACATTATATCTCCTTGCTCACAGTTCTTACCATACGTTCCACCTGGTTTGTTTAGGTTCACATTGTACAGAGAGGTGCTGTCCGACCTTTGATAGAGATGCTTTCGTCTCCTGATGTACAACTTAGAGAAATGTCTGCCTTTGCATTGGGGAGATTGGCCCAGGTTATTGTTTTTTTTGTTTTTTTCTTTCCTTGTTTATAATTCAATTTTGTAAGTTGGGAATGTGATTCTCTTTTAGATTCATGGAAACATGTCAGCGTTTTCTTTCCTTCCGTAATAGATTTTTAGATTTGCAACACATCTTGTACACCTCCATCTTCTCGTTAATTGATGTATCTAGTGGGCTCATACCTAAGAACATAACTCATCTTAGTGATATATAACAACATATTACATGCAAGTGCTATACAATGTTTACATTTATAGGCAGAGTTCTTAACATATAAACATCCCTTTTGCCATGATTGACATTTTTTTTTCCAATTTCAGGACACACATAACCAAGCTGGTATTGCACACAATGGTGGTTTAGTGCCACTGCTCAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGAGAATGAGGTATGATATAACTGAAAATCCGAATGAAGTGGACATCTTCTGTCTTACAACATCAACAACCAAGCCGTGTCTCATTAGGTGGGATCGGCTATGTGGATCAAACGATTCCATAATAATATATCACAAGACATGATATTAGCCAAATGATTGACCTCTAAATCTTAAATGTTTTGGAATTTTGCTTTTTTGGCCCCCCAAAGCGGTTCGGTTTGTAATTCCCAAACGGCTTTTTTGTGTTTATAAGCCCTTCGGGAGATATCTCCCGAACGTTGTTTTATAGGCTTTAAGAGTAAATAGGGGGGCCAAAAGAGCAGTCATCAATGTTTTGCCCATAGTTTTTCTTGGCTTTGCTCTGTCTCTAGCGATTGAGCTATGCTCCATCATATCTACTCTCCTTTCTATTGAATCTGAAGAACTTCTCCACACATTTCTAAACCACCTATTTTCTACAAACAGGTGCTACTCCAACTCTCTCTCAAATGTTATTTTTCCCAATCCTTATGTCTAGTATTTCCACTCATCCAACACAACATTCTCATCCTTGATACGTTGAGTTTATTCCCGTATTGGCATTTTACAGCCCATCAACCGTATCATACAACATTGTCAGTCTTATAACTGTTTGACAAAATATTCCCTTTCACACGAGCTGTATCTTTTTATCACATAAAGATGCGAAGACTTCCTCCATTTCAACTACCCTGCTTGGATAAAATGATTTACATCTCCACTCTTAAATTTAAATAATTGTTACTTCAAATATAGTAATTAACTATTCCCTTTTTTGTTTTATTTTTCCCCACAGGATAATGTGTCGGATTTCATTAGGGTAGGTGGAGTTCAAAGACTACAAGAAGGAGAGTTTATTGTTCAAGTAAGTTTTCTCTTTATTCCTAGTTTTAGCACTTATTTCAGGCTTTCTGCTTTTATCCTTGGATTCCTGTATAAAAGGGAACTATAATACTTCACGATTGCATGTGAATAGTTATAGCATTAGGGATTGAACGGGGAAAAATAGATTCTTATTGGACATATATTGACCTATGTGGATATGGTTTCTATTGCAGGCGACTAAAGATTGTGTTGCCAAGACATTGAAAAGATTAGAGGAGAAGATTCACGGTCGTGTATGACATCATACTAATATTACTTTCTGCATTTTGTTGTAACTAGCATGCGAAATGATTAGAGTGCAACTAGTACATCAACTATCAGTTCTATGGGTTGTTGTGTTCAAACTTGTAATCCGTCAATTTTCTTCTTATAGGTGTTGAACCATCTGTTATATCTTATGCGAGTTTCAGAAAGGGGTTTTCAAAGGCGAATTGCGTTGGTTCTTGCACATCTTTGCCCTGCAGATGATCAAAGAAGAATTTTTATTGAACACCATGGTAAATGCATCTTCGTAAAATACTTTCATGGGTTTGATTATTGTTGTTTCATGCTGTACAAATTCCTTTTTGTACTTGTTATATTTCAAAGTTAAGCATCTGTCCATGTAGGTCTTGAGTTGCTTATCAGTCTTCTCAGCTCATCCAGCTCCAAACAGCAACTTGATGGTGCTGTGGCTTTATGCAAGTTGGCCAATAAAGCCTCGGCCCTGTCTCCTGTAGACGCCGCTCCTCCTTCTCCAACACCACAGGTAGGTTCAAGTCCAGTTGTATTTTCCTCAATCCTCACAATCTTTCTGTTCAAATTTAATAAAAAAGAAAGGGGTCTTTATGATGTGAATAGGCATCGGCTTTCATTTATTCGAAATCTTCAGATTTTTTCTTTTTTCCTTTTGATTTTAACATAGGAAAATGTTGTTTCCTTTTTTTTATATCAATCCTTTTTAGAAAAGGGGTCTTTATGATGTCAATAGGCATCAGTCTTCATGTATTCGAAATCTTCAGTTTTTCTTTTTTCCTTTTGATTTCAGCAGAGAAAAATGTTGTTTCCTTTGGTTATATCAACCCTTTTTGCACTGATATGACCTTTCAACACACATTTTGTTTTATGTACTTTGGTATTTAAGTTTTTCTAATATTGGTATCACATGTTGTGTATAGTAGTGAGTGGTCGATACAAGGACTTCTTAATGATTTACATTATTATTTGTGTATGATATTTGTTGACTGCTGTGGTGACATTTTACGTTTATGTGAATATGAGTGATGATGTCTAGCTAAAAATATATGGTCCATTTAAAAATGAGCATCTGATGGCTAATAACCAGACGTTATTATTCTACCAAAAAAAAAAAAAAAAAAACCAGACATTATTATCAATGTCTTGCTATTTTCCATGCCTTCCAACCTGCATAAGAATTTGGGTGCTGAGCTCCCTCTTCAATCTCGCTTTGTCTAAGTAATTATGGAGTGAGGTGTTTCTAAAAGCTGGATTATCTATAATTATAAACTATTCTTCTTACAGGTTTACTTAGGAGAGCAGTATGTAAACAATGCTACATTGTCCGATGTTACATTTTTGGTTGAAGGTGATTATCCCTTCTGTCCACATTGTTTCGTTCTTAAAACTGTTGCATAGCTACCTTCTCTTAAAATATGGTACTGTATCTTCAGTTGACATGTACTGTTAACTGGTTAATCTCTTTTCTTTGTTGCAGGCAAACGCTTTTATGCTCATAGAATATGTCTACTGGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAGGGTGAGTATACACTGAGCTCCCACACCAAATTATATTTTTCCCTTCCCTAAAGAAGCTCCCCCAAGAAATAAGCATACTGCAAGAAGCAATTATTATTTTTACTTATTACAAAATGATGTCCAAAAGAATAAAACCATTATTGACTTAACATGTTTTATTTAGCTACATTATTTCAATAAAATGTTTTGATTTTCATGCTCTTTCAACCTCCTGACAACTTTTACTGCAAACTTGGCTGTTGTGTTGATTGGTAGATTTGAATTGAAGCATATAACTATCAAAATTTGCATTTTTATTCAAAGCAGAAAGTGATTGATTTATGTCACTGATGTACATCGTTTTATTGCATTTGCATGACAGGAGAAGGATGCAAGGGACATAGAGATCCCAAATATTAGATGGGAAGTTTTTGAGTTGATGATGAGGTCTAATAAATTCTGCAGTCATGTTTTGTAAAATTTTTAATGTGAAAGTTTCTATATGTGAATAACATATCTTAATTGTTTATTTGGTCGGCATCCAGATTTATATATACTGGATCAGTTGATATCACTCCAGATATTGCTCAAGACCTTCTTCGAGCAGCTGATCAATATCTTTTAGATGGACTAAAGAGACTTTGTGAGTACACAATTGCACAGGTGAGCTAGGAAAATTGGTTGTATGGATAATATTTACTCTTCTCTTTCTCATGAAAATAACTCTTGCTTGATATATCTGTGTTTGTAAAATGGGTGCCTCATGACCCGATGTTCTTGTCTCAGGATATATTACTGGAGAACGTGTCAAGTATGTATGAACTTTCAGAAGCCTTCAATGCATTATCATTGAGGCATGCATGCATTCTTTATATCTTGGAGCACTTTGATAAGTTGAGCGCGAGGCAAGGGTATTGATCTGATTCCCTCAATTCTATTCGATGTTGGACATTTATACTGAACTAATAACTTGGTACCTTGTTTAGTAGTGCTCTGTCTTCATGTTTGTTGTAGTTTTGGTGACCGACCTTGGTAGTTTATATTCTAATGAAATGTGAAGTACCGTGCACTGATTTTTTTTTCTAGTTCTTTTTGGGTGAGGAGGGACATATTTTGATGTGTGCTCAATATATAGTTGGCATCTCACTTTTCTTTTCTTCCATAGCGACTTATTATATCGTGTTCTTACTTCTGCTTGTTTTAGACAAAGTTCATTCAAAGGGATGCTAAACTTTATTATAAATAGATTTTGTGGCGGTAGAAACCAACCTCTGGTTAGCTGAATGGTTCGGTTTCAGCAAGTTGCTCAATGCACAGTTTATTTATAATGGCGTCGTGCTTAAATCATATGATATTTAGAATGGTCTCGTGCTTAAATCTTCAGCTTCTTGATTGTGTGGCACCAATTGTTTGCAGGCACTCTCTTCTGATTCAGCGTATAATACCAGAGATCCGCAATTACTTTGTTAAAGCTCTTACAAATGCCAACTCCCATAGACTGTAA

Protein sequence

>MS.gene93871.t1

MEFQRRQGHCLSERKGQKRKLDEELPEDRQISSAPPTADERAALLVEVANQVTVLESTFTWNEDDRAAAKRATHALADLAKNEEVVNVIVEGGAIPALIKHLQAPPVTDCVQKPLPFEHEVEKGSAFALGLLAVKPEHQQLIVDSGALTHLVDLLKRHNNGLTSRAINSLIRRAADAVTNLAHENSNIKTHVRMEGGIPPLVHLLEFADTKVQRAAAGALRTLAFKNDENKIQIVECDALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLFAGALQPVIGLLSSRCPESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLSSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAENEDNVSDFIRVGGVQRLQEGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSERGFQRRIALVLAHLCPADDQRRIFIEHHGLELLISLLSSSSSKQQLDGAVALCKLANKASALSPVDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDITPDIAQDLLRAADQYLLDGLKRLCEYTIAQDILLENVSSMYELSEAFNALSLRHACILYILEHFDKLSARQGHSLLIQRIIPEIRNYFVKALTNANSHRL