AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93877

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93877.t1 MTR_1g104780 98.853 523 6 0 1 523 1 523 0.0 1053
MS.gene93877.t1 MTR_5g006070 82.812 512 84 2 13 523 13 521 0.0 872
MS.gene93877.t1 MTR_5g006070 81.933 476 82 2 49 523 1 473 0.0 802
MS.gene93877.t1 MTR_1g104770 69.200 500 153 1 1 499 1 500 0.0 721
MS.gene93877.t1 MTR_1g104750 68.800 500 154 2 1 499 1 499 0.0 718
MS.gene93877.t1 MTR_3g008160 56.400 500 211 6 10 507 11 505 0.0 593
MS.gene93877.t1 MTR_5g094760 58.200 500 199 6 1 495 1 495 0.0 588
MS.gene93877.t1 MTR_0204s0020 56.379 486 207 4 13 498 12 492 0.0 587
MS.gene93877.t1 MTR_5g082540 56.400 500 214 3 7 505 8 504 0.0 580
MS.gene93877.t1 MTR_7g091690 57.600 500 202 6 1 495 1 495 0.0 580
MS.gene93877.t1 MTR_0204s0020 55.967 486 206 5 13 498 12 489 0.0 577
MS.gene93877.t1 MTR_0204s0040 52.883 503 231 5 2 503 8 505 0.0 566
MS.gene93877.t1 MTR_4g116770 52.883 503 231 5 2 503 204 701 0.0 565
MS.gene93877.t1 MTR_4g116790 53.094 501 228 5 3 501 6 501 0.0 561
MS.gene93877.t1 MTR_4g091370 57.927 492 203 3 11 500 12 501 0.0 556
MS.gene93877.t1 MTR_1g038630 53.877 503 223 4 12 513 13 507 0.0 553
MS.gene93877.t1 MTR_3g008170 52.976 504 228 7 10 510 11 508 0.0 550
MS.gene93877.t1 MTR_8g102860 53.600 500 227 5 14 512 18 513 0.0 544
MS.gene93877.t1 MTR_6g087040 53.557 506 226 6 1 501 1 502 0.0 539
MS.gene93877.t1 MTR_6g088375 53.557 506 226 6 1 501 1 502 0.0 539
MS.gene93877.t1 MTR_3g008160 55.965 461 196 6 49 507 1 456 0.0 537
MS.gene93877.t1 MTR_5g041550 53.187 502 231 3 1 499 1 501 0.0 534
MS.gene93877.t1 MTR_3g093010 52.233 515 241 3 1 513 1 512 0.0 531
MS.gene93877.t1 MTR_0009s0370 52.410 498 231 3 13 508 12 505 0.0 530
MS.gene93877.t1 MTR_4g090600 54.618 498 220 4 7 501 8 502 0.0 521
MS.gene93877.t1 MTR_1g038600 51.491 503 217 5 12 513 13 489 1.27e-179 514
MS.gene93877.t1 MTR_3g023480 50.916 491 238 2 13 501 12 501 1.72e-177 509
MS.gene93877.t1 MTR_8g102860 53.763 465 210 5 49 512 1 461 1.19e-176 505
MS.gene93877.t1 MTR_3g074410 47.992 523 249 11 1 514 1 509 9.38e-175 502
MS.gene93877.t1 MTR_3g074390 48.178 494 248 6 16 506 22 510 3.79e-174 501
MS.gene93877.t1 MTR_3g074270 46.733 505 243 6 1 503 1 481 3.38e-168 484
MS.gene93877.t1 MTR_3g007910 49.102 501 220 5 1 499 1 468 1.63e-165 478
MS.gene93877.t1 MTR_3g093060 53.982 452 204 3 49 497 1 451 3.32e-163 471
MS.gene93877.t1 MTR_4g116790 50.138 363 176 3 3 363 6 365 2.09e-132 390
MS.gene93877.t1 MTR_3g074380 50.287 348 165 5 16 360 20 362 7.22e-117 350
MS.gene93877.t1 MTR_3g074340 45.031 322 171 5 188 506 20 338 2.29e-103 314
MS.gene93877.t1 MTR_3g074320 45.031 322 171 5 188 506 20 338 2.87e-103 313
MS.gene93877.t1 MTR_3g074370 44.615 325 173 6 188 509 20 340 1.18e-102 312
MS.gene93877.t1 MTR_3g074400 37.199 457 226 11 49 481 1 420 9.17e-91 284
MS.gene93877.t1 MTR_6g088450 30.303 462 285 8 27 476 63 499 6.84e-58 201
MS.gene93877.t1 MTR_7g005910 29.980 507 311 13 11 505 22 496 1.35e-57 199
MS.gene93877.t1 MTR_4g069500 29.457 516 313 12 25 515 32 521 6.01e-56 196
MS.gene93877.t1 MTR_3g116240 28.953 487 286 9 26 483 32 487 1.19e-55 195
MS.gene93877.t1 MTR_4g072030 28.106 491 305 9 26 496 31 493 2.51e-54 191
MS.gene93877.t1 MTR_3g084110 28.600 500 326 10 11 504 17 491 3.20e-54 190
MS.gene93877.t1 MTR_4g069500 30.612 441 277 8 99 515 36 471 3.39e-54 190
MS.gene93877.t1 MTR_1g116660 29.389 524 322 14 5 517 14 500 3.64e-54 191
MS.gene93877.t1 MTR_1g116650 28.715 498 315 9 5 496 57 520 2.82e-53 189
MS.gene93877.t1 MTR_8g103500 28.310 491 312 10 7 483 3 467 3.48e-53 187
MS.gene93877.t1 MTR_7g446340 27.071 495 320 10 23 505 55 520 1.09e-52 187
MS.gene93877.t1 MTR_6g007340 27.071 495 320 10 23 505 55 520 1.09e-52 187
MS.gene93877.t1 MTR_2g013310 29.487 390 260 6 103 483 40 423 2.04e-50 179
MS.gene93877.t1 MTR_2g013310 27.966 472 301 10 23 483 53 496 2.95e-50 180
MS.gene93877.t1 MTR_5g096000 50.820 183 70 2 1 183 1 163 4.03e-50 174
MS.gene93877.t1 MTR_5g096000 52.174 138 63 2 362 499 165 299 5.94e-34 130
MS.gene93877.t1 MTR_4g077740 28.803 493 304 11 10 486 38 499 4.31e-50 179
MS.gene93877.t1 MTR_8g077890 29.530 447 286 7 83 505 59 500 6.55e-50 179
MS.gene93877.t1 MTR_5g075300 29.176 449 288 8 78 502 55 497 9.28e-50 178
MS.gene93877.t1 MTR_7g113970 27.572 486 306 8 10 483 40 491 7.34e-48 173
MS.gene93877.t1 MTR_2g049020 32.345 371 221 8 20 382 24 372 3.36e-45 167
MS.gene93877.t1 MTR_6g018790 28.903 474 293 11 18 485 105 540 5.28e-45 166
MS.gene93877.t1 MTR_7g113960 28.000 475 303 10 12 483 16 454 7.16e-45 165
MS.gene93877.t1 MTR_5g077580 26.957 575 296 15 20 501 24 567 1.26e-44 166
MS.gene93877.t1 MTR_8g077310 30.709 381 250 6 107 483 14 384 7.85e-44 160
MS.gene93877.t1 MTR_7g082270 29.325 474 291 12 20 487 67 502 7.88e-44 162
MS.gene93877.t1 MTR_8g077310 28.326 466 299 9 22 483 47 481 1.83e-43 161
MS.gene93877.t1 MTR_3g074330 50.311 161 68 4 1 152 1 158 3.14e-43 152
MS.gene93877.t1 MTR_3g074360 50.311 161 68 4 1 152 1 158 3.14e-43 152
MS.gene93877.t1 MTR_3g074310 49.689 161 69 4 1 152 1 158 1.88e-42 149
MS.gene93877.t1 MTR_1g022315 30.829 386 248 7 107 485 14 387 2.45e-42 155
MS.gene93877.t1 MTR_2g048720 31.563 339 204 7 20 352 24 340 4.20e-42 159
MS.gene93877.t1 MTR_1g022315 30.829 386 248 7 107 485 113 486 8.94e-42 156
MS.gene93877.t1 MTR_8g077300 30.263 380 251 5 108 483 104 473 1.05e-41 156
MS.gene93877.t1 MTR_1g038620 47.134 157 66 1 204 360 50 189 5.40e-41 146
MS.gene93877.t1 MTR_7g082270 29.327 416 255 10 20 432 67 446 1.38e-40 152
MS.gene93877.t1 MTR_2g026160 28.715 397 247 9 1 382 1 376 4.61e-40 153
MS.gene93877.t1 MTR_5g020270 29.474 380 256 5 107 483 14 384 1.93e-39 148
MS.gene93877.t1 MTR_5g020270 29.474 380 256 5 107 483 114 484 4.23e-39 149
MS.gene93877.t1 MTR_4g118610 30.130 385 249 7 104 483 113 482 1.84e-38 147
MS.gene93877.t1 MTR_2g020710 26.778 478 313 9 9 483 36 479 3.73e-38 146
MS.gene93877.t1 MTR_3g080240 27.317 410 271 11 88 487 139 531 1.12e-37 145
MS.gene93877.t1 MTR_5g019870 27.166 427 289 7 78 483 50 475 1.17e-37 145
MS.gene93877.t1 MTR_7g094450 26.044 407 286 5 83 487 80 473 4.26e-37 143
MS.gene93877.t1 MTR_7g094110 26.781 407 283 5 83 487 82 475 4.35e-37 143
MS.gene93877.t1 MTR_2g020710 29.243 383 255 7 104 483 21 390 5.02e-37 141
MS.gene93877.t1 MTR_4g013205 24.722 449 321 8 46 491 42 476 2.17e-35 138
MS.gene93877.t1 MTR_4g064820 30.352 369 219 10 6 352 75 427 8.23e-33 131
MS.gene93877.t1 MTR_4g069500 29.254 335 208 8 205 515 3 332 1.22e-32 127
MS.gene93877.t1 MTR_6g087910 25.897 390 273 7 46 433 56 431 3.64e-32 129
MS.gene93877.t1 MTR_0064s0040 43.046 151 72 3 11 161 13 149 2.30e-31 119
MS.gene93877.t1 MTR_8g077310 28.611 360 222 8 22 376 47 376 3.75e-31 125
MS.gene93877.t1 MTR_5g020270 27.704 379 243 7 107 483 114 463 5.98e-31 125
MS.gene93877.t1 MTR_7g113970 26.500 400 250 8 10 397 40 407 1.76e-30 123
MS.gene93877.t1 MTR_7g113960 27.649 387 243 10 12 395 16 368 8.30e-30 121
MS.gene93877.t1 MTR_2g026140 28.022 364 219 11 28 381 30 360 4.76e-29 121
MS.gene93877.t1 MTR_7g094110 25.553 407 268 6 83 487 82 455 5.43e-28 117
MS.gene93877.t1 MTR_2g020710 26.005 423 276 9 9 428 36 424 6.80e-27 113
MS.gene93877.t1 MTR_2g020710 26.225 408 264 9 9 413 36 409 8.54e-27 112
MS.gene93877.t1 MTR_4g118610 28.190 337 222 7 83 414 92 413 4.97e-26 110
MS.gene93877.t1 MTR_1g114280 38.710 155 74 4 347 500 21 155 2.44e-24 99.8
MS.gene93877.t1 MTR_2g020710 26.243 362 233 8 9 367 36 366 3.08e-23 101
MS.gene93877.t1 MTR_3g116060 33.523 176 114 3 88 261 48 222 2.56e-18 89.0
MS.gene93877.t1 MTR_3g116060 27.888 251 151 10 257 485 473 715 3.48e-14 75.9
MS.gene93877.t1 MTR_3g118530 30.978 184 124 3 88 269 50 232 1.49e-16 83.2
MS.gene93877.t1 MTR_3g118530 23.887 247 158 7 257 481 483 721 2.23e-11 67.0
MS.gene93877.t1 MTR_5g024740 24.896 241 158 5 22 260 4 223 1.56e-16 83.2
MS.gene93877.t1 MTR_5g024740 27.273 264 161 7 235 481 454 703 7.77e-12 68.6
MS.gene93877.t1 MTR_3g118530 30.978 184 124 3 88 269 50 232 2.35e-16 82.4
MS.gene93877.t1 MTR_8g073100 29.570 186 127 4 84 267 47 230 2.84e-15 79.3
MS.gene93877.t1 MTR_8g073100 27.953 254 154 6 241 481 462 699 3.15e-14 75.9
MS.gene93877.t1 MTR_5g044910 25.281 178 131 2 84 260 47 223 4.31e-15 78.6
MS.gene93877.t1 MTR_5g044910 27.897 233 149 5 264 485 481 705 1.28e-11 67.8
MS.gene93877.t1 MTR_6g006260 37.398 123 66 4 239 352 32 152 1.61e-14 73.6
MS.gene93877.t1 MTR_6g006260 37.398 123 66 4 239 352 33 153 3.45e-14 73.2
MS.gene93877.t1 MTR_1g093115 51.667 60 28 1 161 219 1 60 3.44e-12 62.0
MS.gene93877.t1 MTR_6g006260 38.384 99 56 3 256 352 1 96 2.87e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93877.t1 AT5G26340 76.879 519 118 2 1 518 1 518 0.0 830
MS.gene93877.t1 AT4G02050 56.140 513 214 6 1 507 1 508 0.0 606
MS.gene93877.t1 AT4G02050 56.140 513 214 6 1 507 1 508 0.0 606
MS.gene93877.t1 AT1G11260 55.426 516 225 4 1 513 1 514 0.0 584
MS.gene93877.t1 AT1G77210 56.436 505 211 7 1 500 1 501 0.0 570
MS.gene93877.t1 AT1G77210 56.436 505 211 7 1 500 1 501 0.0 570
MS.gene93877.t1 AT5G23270 55.666 503 219 3 1 500 1 502 0.0 570
MS.gene93877.t1 AT5G26250 57.968 502 206 4 7 507 7 504 0.0 565
MS.gene93877.t1 AT3G19940 54.004 487 220 4 18 503 21 504 0.0 563
MS.gene93877.t1 AT1G50310 54.618 498 216 6 18 513 21 510 0.0 561
MS.gene93877.t1 AT3G05960 57.256 503 209 4 7 507 6 504 0.0 558
MS.gene93877.t1 AT4G21480 54.819 498 219 4 8 503 9 502 0.0 539
MS.gene93877.t1 AT3G19930 50.607 494 240 3 12 504 13 503 0.0 525
MS.gene93877.t1 AT3G19930 50.607 494 240 3 12 504 13 503 0.0 525
MS.gene93877.t1 AT1G34580 47.843 510 247 8 1 499 1 502 4.88e-171 493
MS.gene93877.t1 AT1G07340 51.633 490 232 3 12 500 13 498 6.59e-170 489
MS.gene93877.t1 AT5G61520 48.297 499 247 7 16 508 18 511 4.66e-163 473
MS.gene93877.t1 AT1G34580 47.484 457 229 6 49 499 1 452 3.15e-152 443
MS.gene93877.t1 AT5G61520 47.109 467 236 6 48 508 2 463 2.66e-146 428
MS.gene93877.t1 AT1G77210 58.286 350 142 4 152 500 6 352 2.26e-144 419
MS.gene93877.t1 AT1G50310 53.955 354 159 4 152 503 11 362 9.88e-141 410
MS.gene93877.t1 AT2G18480 30.297 472 281 10 36 485 36 481 3.93e-59 204
MS.gene93877.t1 AT2G16130 29.730 481 290 8 26 483 30 485 5.30e-58 201
MS.gene93877.t1 AT2G16120 30.544 478 290 10 26 483 30 485 7.46e-58 201
MS.gene93877.t1 AT4G36670 30.162 494 296 10 13 483 8 475 1.79e-56 196
MS.gene93877.t1 AT3G18830 28.750 480 299 7 26 485 40 496 1.64e-55 195
MS.gene93877.t1 AT5G59250 32.041 490 282 13 22 489 98 558 1.18e-51 185
MS.gene93877.t1 AT2G20780 27.984 486 309 10 10 483 40 496 3.26e-50 180
MS.gene93877.t1 AT2G43330 28.842 475 306 10 26 493 35 484 7.96e-50 179
MS.gene93877.t1 AT1G30220 30.051 396 239 9 1 381 1 373 1.03e-48 177
MS.gene93877.t1 AT1G08930 30.833 480 287 13 10 483 47 487 1.73e-48 175
MS.gene93877.t1 AT1G08930 30.833 480 287 13 10 483 47 487 1.73e-48 175
MS.gene93877.t1 AT2G20780 28.780 410 275 6 83 483 37 438 6.83e-48 172
MS.gene93877.t1 AT5G27350 27.536 483 313 10 10 490 20 467 1.14e-46 169
MS.gene93877.t1 AT3G05165 26.250 480 309 9 10 483 19 459 2.27e-46 169
MS.gene93877.t1 AT3G05165 26.250 480 309 9 10 483 19 459 2.27e-46 169
MS.gene93877.t1 AT3G05165 26.250 480 309 9 10 483 19 459 2.27e-46 169
MS.gene93877.t1 AT5G17010 29.412 493 280 13 23 486 48 501 5.17e-46 168
MS.gene93877.t1 AT5G17010 29.412 493 280 13 23 486 48 501 5.17e-46 168
MS.gene93877.t1 AT5G17010 29.412 493 280 13 23 486 48 501 5.17e-46 168
MS.gene93877.t1 AT1G08890 30.807 409 264 8 83 487 67 460 1.17e-45 166
MS.gene93877.t1 AT1G08900 31.514 403 257 6 85 483 25 412 7.73e-45 163
MS.gene93877.t1 AT3G05160 26.458 480 308 10 10 483 10 450 1.66e-44 163
MS.gene93877.t1 AT1G08900 31.514 403 257 6 85 483 67 454 2.08e-44 163
MS.gene93877.t1 AT1G08900 31.514 403 257 6 85 483 67 454 2.08e-44 163
MS.gene93877.t1 AT1G08900 31.514 403 257 6 85 483 59 446 2.20e-44 163
MS.gene93877.t1 AT3G03090 30.085 472 290 14 30 486 55 501 9.42e-44 162
MS.gene93877.t1 AT3G05160 27.901 405 269 6 85 483 14 401 1.79e-43 159
MS.gene93877.t1 AT3G05160 27.901 405 269 6 85 483 14 401 1.79e-43 159
MS.gene93877.t1 AT5G27360 26.337 486 315 9 10 490 24 471 1.98e-43 160
MS.gene93877.t1 AT3G05400 28.542 480 297 13 11 483 15 455 3.70e-43 160
MS.gene93877.t1 AT1G75220 29.747 474 289 11 19 483 44 482 5.95e-43 159
MS.gene93877.t1 AT5G27360 26.337 486 315 9 10 490 72 519 8.24e-43 160
MS.gene93877.t1 AT5G16150 28.125 480 301 11 10 483 97 538 5.99e-42 158
MS.gene93877.t1 AT5G16150 28.125 480 301 11 10 483 97 538 5.99e-42 158
MS.gene93877.t1 AT5G16150 28.125 480 301 11 10 483 97 538 5.99e-42 158
MS.gene93877.t1 AT2G48020 27.027 407 282 5 83 487 68 461 3.40e-41 154
MS.gene93877.t1 AT2G48020 27.027 407 282 5 83 487 68 461 3.40e-41 154
MS.gene93877.t1 AT3G05165 25.486 463 300 9 1 457 10 433 4.42e-41 155
MS.gene93877.t1 AT5G18840 28.224 411 279 6 83 490 84 481 2.12e-40 152
MS.gene93877.t1 AT1G05030 27.991 443 300 10 46 483 85 513 2.69e-40 153
MS.gene93877.t1 AT3G05165 27.356 435 270 11 1 428 10 405 5.91e-40 151
MS.gene93877.t1 AT3G05165 27.356 435 270 11 1 428 10 405 5.91e-40 151
MS.gene93877.t1 AT3G05155 25.732 478 315 9 12 486 17 457 6.71e-40 150
MS.gene93877.t1 AT1G05030 28.049 410 278 9 79 483 64 461 1.22e-39 150
MS.gene93877.t1 AT1G54730 26.998 463 300 9 28 487 38 465 3.18e-39 149
MS.gene93877.t1 AT4G16480 30.728 371 214 9 1 352 1 347 3.40e-39 150
MS.gene93877.t1 AT4G16480 30.728 371 214 9 1 352 1 347 3.40e-39 150
MS.gene93877.t1 AT4G16480 30.728 371 214 9 1 352 1 347 3.40e-39 150
MS.gene93877.t1 AT3G05150 26.369 493 318 10 10 491 23 481 5.50e-39 149
MS.gene93877.t1 AT3G05150 27.044 477 311 9 10 483 23 465 6.76e-39 148
MS.gene93877.t1 AT3G05150 27.044 477 311 9 10 483 23 465 6.76e-39 148
MS.gene93877.t1 AT1G08920 26.483 472 309 9 15 483 25 461 7.17e-39 148
MS.gene93877.t1 AT5G27360 27.368 380 261 6 113 490 1 367 1.95e-38 145
MS.gene93877.t1 AT5G27360 27.368 380 261 6 113 490 1 367 1.95e-38 145
MS.gene93877.t1 AT1G19450 28.238 471 300 10 19 483 45 483 3.12e-38 146
MS.gene93877.t1 AT2G35740 30.504 377 223 12 20 382 24 375 6.32e-38 147
MS.gene93877.t1 AT1G08920 26.050 476 313 9 15 483 25 468 1.15e-36 142
MS.gene93877.t1 AT3G05400 27.292 480 283 14 11 483 15 435 1.83e-36 140
MS.gene93877.t1 AT1G08900 30.663 362 232 6 85 442 67 413 1.99e-36 140
MS.gene93877.t1 AT1G08920 26.471 442 287 9 15 453 25 431 5.75e-35 137
MS.gene93877.t1 AT1G54730 26.682 431 278 9 28 455 38 433 1.72e-34 135
MS.gene93877.t1 AT4G04760 29.610 385 253 7 104 483 33 404 2.62e-34 134
MS.gene93877.t1 AT4G04760 29.610 385 253 7 104 483 92 463 7.24e-34 134
MS.gene93877.t1 AT4G04750 26.702 382 263 6 106 483 99 467 2.17e-33 132
MS.gene93877.t1 AT4G04750 26.702 382 263 6 106 483 99 467 2.17e-33 132
MS.gene93877.t1 AT4G04750 26.702 382 263 6 106 483 143 511 2.36e-33 133
MS.gene93877.t1 AT1G54730 26.781 407 262 8 83 487 72 444 2.07e-32 129
MS.gene93877.t1 AT1G67300 24.717 441 318 7 46 483 57 486 6.63e-32 129
MS.gene93877.t1 AT1G79820 26.351 444 304 9 46 483 60 486 1.90e-31 127
MS.gene93877.t1 AT1G79820 26.351 444 304 9 46 483 60 486 1.90e-31 127
MS.gene93877.t1 AT5G27360 25.962 416 265 9 10 420 24 401 2.60e-31 126
MS.gene93877.t1 AT1G67300 24.752 404 286 8 46 446 57 445 2.83e-31 126
MS.gene93877.t1 AT1G67300 24.752 404 286 8 46 446 57 445 2.83e-31 126
MS.gene93877.t1 AT1G67300 24.887 442 315 8 46 483 57 485 7.38e-31 125
MS.gene93877.t1 AT1G67300 24.887 442 315 8 46 483 57 485 7.38e-31 125
MS.gene93877.t1 AT1G67300 25.330 379 267 7 46 421 57 422 1.38e-30 124
MS.gene93877.t1 AT1G67300 25.330 379 267 7 46 421 57 422 1.38e-30 124
MS.gene93877.t1 AT1G79820 26.154 390 272 7 46 433 60 435 3.19e-30 123
MS.gene93877.t1 AT1G54730 26.700 397 253 9 28 421 38 399 2.33e-29 120
MS.gene93877.t1 AT1G54730 26.700 397 253 9 28 421 38 399 2.33e-29 120
MS.gene93877.t1 AT2G48020 28.707 317 209 5 83 397 68 369 3.67e-28 116
MS.gene93877.t1 AT4G04760 27.877 391 249 8 104 483 92 460 6.40e-28 117
MS.gene93877.t1 AT1G54730 25.600 375 243 7 83 455 72 412 7.01e-28 115
MS.gene93877.t1 AT1G54730 27.523 327 204 6 28 352 38 333 1.43e-26 110
MS.gene93877.t1 AT3G05155 25.656 343 219 8 12 352 17 325 5.24e-26 108
MS.gene93877.t1 AT5G17010 25.358 489 245 12 23 486 45 438 3.09e-25 108
MS.gene93877.t1 AT2G48020 29.412 272 180 4 83 352 68 329 3.11e-25 107
MS.gene93877.t1 AT3G20460 23.415 410 297 6 83 489 93 488 2.48e-24 106
MS.gene93877.t1 AT1G54730 26.910 301 190 5 28 326 38 310 1.78e-23 101
MS.gene93877.t1 AT1G54730 26.910 301 190 5 28 326 38 310 1.78e-23 101
MS.gene93877.t1 AT1G54730 25.513 341 218 7 83 421 72 378 4.61e-23 101
MS.gene93877.t1 AT1G79820 24.099 444 266 10 46 483 60 438 1.09e-18 89.0
MS.gene93877.t1 AT3G51490 30.601 183 124 3 88 269 2 182 4.93e-18 88.2
MS.gene93877.t1 AT3G51490 27.126 247 145 9 260 485 436 668 1.49e-14 77.0
MS.gene93877.t1 AT3G51490 30.601 183 124 3 88 269 52 232 5.38e-18 87.8
MS.gene93877.t1 AT3G51490 25.911 247 140 10 260 485 486 710 9.79e-11 65.1
MS.gene93877.t1 AT3G51490 30.601 183 124 3 88 269 52 232 6.53e-18 87.8
MS.gene93877.t1 AT3G51490 27.126 247 145 9 260 485 486 718 1.97e-14 76.6
MS.gene93877.t1 AT1G20840 33.000 200 123 6 77 267 31 228 1.18e-16 83.6
MS.gene93877.t1 AT1G20840 33.000 200 123 6 77 267 31 228 1.18e-16 83.6
MS.gene93877.t1 AT1G79820 24.224 322 183 6 126 446 77 338 1.88e-15 78.6
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.58e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 473 714 2.16e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.58e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 473 714 2.16e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.58e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 473 714 2.16e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.73e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.07e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.73e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.07e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.73e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.07e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.73e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.07e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.73e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.07e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.73e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.07e-11 67.0
MS.gene93877.t1 AT4G35300 29.012 162 113 2 107 267 70 230 5.73e-14 75.1
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 483 724 2.07e-11 67.0
MS.gene93877.t1 AT4G35300 26.000 250 156 7 257 485 286 527 3.19e-11 66.2

Find 131 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTATGATGTTGGAGTTTC+AGG 0.113291 1.2:+77759376 MS.gene93877:CDS
ATTCACTTCATCATTGTATT+TGG 0.179815 1.2:+77759790 MS.gene93877:CDS
CTTTACTCTGCTGTGATTAC+TGG 0.220334 1.2:+77763528 MS.gene93877:CDS
CCAGCATTACTCCTCACTTT+AGG 0.220398 1.2:+77762893 MS.gene93877:CDS
CCTCGTTCAATGAGACTATT+TGG 0.242087 1.2:-77762938 None:intergenic
CAGCATTACTCCTCACTTTA+GGG 0.249351 1.2:+77762894 MS.gene93877:CDS
AATATATTCGGTTGATAAAC+TGG 0.252057 1.2:+77763581 MS.gene93877:CDS
GTCTTACTTGGCTGTGGAAT+TGG 0.261288 1.2:+77759959 MS.gene93877:CDS
TGTCATTTCCATTGCCCTAA+TGG 0.296156 1.2:+77763114 MS.gene93877:CDS
ATGCTTTGTTATTTCAAGTT+TGG 0.300180 1.2:+77763900 MS.gene93877:CDS
TGTGGAAGCAGCATTGGTTT+TGG 0.334417 1.2:+77764027 MS.gene93877:CDS
CATTATCATTTCATGCATAA+TGG 0.342417 1.2:+77759330 MS.gene93877:CDS
CCTCACTTTAGGGGCTTACT+TGG 0.349176 1.2:+77762904 MS.gene93877:CDS
TTGGGGTTGGAGGATATCTC+TGG 0.356303 1.2:+77762856 MS.gene93877:CDS
CCAGTTCTGTTCAACACATT+GGG 0.363609 1.2:+77763486 MS.gene93877:CDS
GGTCATGGGGTCCACTTGCT+TGG 0.367069 1.2:+77763769 MS.gene93877:CDS
CTCGTTCAATGAGACTATTT+GGG 0.371455 1.2:-77762937 None:intergenic
ATAGGGACATTCTTTGTCTC+AGG 0.372635 1.2:-77763984 None:intergenic
AAGATTATTACAAACCATTA+GGG 0.383757 1.2:-77763128 None:intergenic
AACGATAGTCTCAATATATT+CGG 0.386732 1.2:+77763569 MS.gene93877:CDS
CTTATGTTTGGTTATGATGT+TGG 0.388237 1.2:+77759367 MS.gene93877:CDS
GCCACCGGAGGTCTTATGTT+TGG 0.389666 1.2:+77759355 MS.gene93877:CDS
ATTGTATTTGGCGGGTTTAA+CGG 0.394528 1.2:+77759802 MS.gene93877:CDS
TTTCAGCTTGATATCACTCT+TGG 0.399756 1.2:+77761982 MS.gene93877:CDS
TGGAGGATATCTCTGGGATT+GGG 0.399827 1.2:+77762863 MS.gene93877:CDS
CACTTCATCATTGTATTTGG+CGG 0.400462 1.2:+77759793 MS.gene93877:CDS
TAACAGAATCAAAGGTCATT+GGG 0.402246 1.2:+77762838 MS.gene93877:intron
CCCAATGTGTTGAACAGAAC+TGG 0.402584 1.2:-77763486 None:intergenic
GCAATCTCTGAAAGGAAAAC+TGG 0.403056 1.2:-77761925 None:intergenic
TTGGAGGATATCTCTGGGAT+TGG 0.417371 1.2:+77762862 MS.gene93877:CDS
AACTGGAGCATAGAACATTA+TGG 0.417549 1.2:-77763469 None:intergenic
AATGCTCCACGTATTCTTGA+AGG 0.430135 1.2:-77761949 None:intergenic
GCTGGCTTCTTCTTCATAGC+TGG 0.430415 1.2:+77759884 MS.gene93877:CDS
ATGCATGAAATGATAATGAT+AGG 0.430983 1.2:-77759325 None:intergenic
TGTCAGCATTTGCATGGTCA+TGG 0.444330 1.2:+77763754 MS.gene93877:CDS
TTTGTGTCATCTCTTCAATA+GGG 0.447342 1.2:-77764001 None:intergenic
TCTTATACAACTCGAGTACT+AGG 0.451742 1.2:+77759839 MS.gene93877:CDS
ATCGTTGGTAGGGTCTTACT+TGG 0.458508 1.2:+77759947 MS.gene93877:CDS
CCACTAGAGACTCGTTCTGC+AGG 0.462076 1.2:+77763813 MS.gene93877:CDS
GTCAGCATTTGCATGGTCAT+GGG 0.464567 1.2:+77763755 MS.gene93877:CDS
TCAAATGTTCTTGTCACAAA+TGG 0.472443 1.2:+77763635 MS.gene93877:CDS
ATAACAGAATCAAAGGTCAT+TGG 0.475393 1.2:+77762837 MS.gene93877:intron
TTTAGGGGCTTACTTGGTAG+TGG 0.480417 1.2:+77762910 MS.gene93877:CDS
CTCTACTAACTCTAAGAACT+CGG 0.481529 1.2:-77763020 None:intergenic
CTGCTAGGGGAATTTCCACC+AGG 0.483891 1.2:-77764092 None:intergenic
CAGATATTTCAGCAATTCAC+TGG 0.497047 1.2:+77763438 MS.gene93877:intron
ATAAGGAACTTACTTGTTGG+TGG 0.500032 1.2:-77762034 None:intergenic
TCCAGTTCTGTTCAACACAT+TGG 0.500531 1.2:+77763485 MS.gene93877:CDS
GGCAAGTCGTGTTGCTAAAG+AGG 0.500547 1.2:+77763042 MS.gene93877:CDS
GAATCAAAGGTCATTGGGGT+TGG 0.506170 1.2:+77762843 MS.gene93877:intron
GAACGAGGTCACTTGGACAA+AGG 0.506352 1.2:+77762953 MS.gene93877:CDS
CGGCAACGACAGAGAATTTG+AGG 0.506930 1.2:+77759291 MS.gene93877:CDS
ACTTCATCATTGTATTTGGC+GGG 0.508139 1.2:+77759794 MS.gene93877:CDS
GGTAGGGTCTTACTTGGCTG+TGG 0.508697 1.2:+77759953 MS.gene93877:CDS
TGGAAAGAACTTCTTCAAGA+AGG 0.515645 1.2:-77759690 None:intergenic
CCTAAAGTGAGGAGTAATGC+TGG 0.516671 1.2:-77762893 None:intergenic
AGACAAGATCATTTCTGCTA+GGG 0.518011 1.2:-77764106 None:intergenic
TCAAAGGTCATTGGGGTTGG+AGG 0.518817 1.2:+77762846 MS.gene93877:CDS
CTTTCGAGAGTTCCTCAGAA+TGG 0.520137 1.2:-77763692 None:intergenic
AGTTGTATAAGACGCGAAGA+AGG 0.523063 1.2:-77759828 None:intergenic
TCTCATTGAACGAGGTCACT+TGG 0.525235 1.2:+77762946 MS.gene93877:CDS
CTTGAAGAAGTTCTTTCCAA+CGG 0.529312 1.2:+77759694 MS.gene93877:CDS
TTCTCATGCTCATCGTTGGT+AGG 0.531973 1.2:+77759936 MS.gene93877:CDS
AGACAGACGACGGAATCAGA+TGG 0.534245 1.2:+77759722 MS.gene93877:CDS
CATTCTTTGTCTCAGGGACA+AGG 0.534348 1.2:-77763977 None:intergenic
ATTACAAACCATTAGGGCAA+TGG 0.539939 1.2:-77763122 None:intergenic
TCTAGTGGAAATATCTCACT+TGG 0.540947 1.2:-77763798 None:intergenic
TGGAATTGGATTTGCAAACC+AGG 0.541646 1.2:+77759973 MS.gene93877:CDS
TAATTAACCATGACGGGAGG+AGG 0.541762 1.2:+77759259 None:intergenic
TGCAGCTCTTGTAGTTGTGA+TGG 0.545486 1.2:+77763719 MS.gene93877:CDS
TGGGGTTGGAGGATATCTCT+GGG 0.548277 1.2:+77762857 MS.gene93877:CDS
TGAAATAACAAAGCATTGAA+AGG 0.549846 1.2:-77763893 None:intergenic
GGAAAGAACTTCTTCAAGAA+GGG 0.551194 1.2:-77759689 None:intergenic
GAGACAAGATCATTTCTGCT+AGG 0.554873 1.2:-77764107 None:intergenic
AGGCTCACAATGTTGATCGC+TGG 0.555620 1.2:+77759866 MS.gene93877:CDS
CACTAGAGACTCGTTCTGCA+GGG 0.555738 1.2:+77763814 MS.gene93877:CDS
AGCATTACTCCTCACTTTAG+GGG 0.556506 1.2:+77762895 MS.gene93877:CDS
TCTCATGCTCATCGTTGGTA+GGG 0.559362 1.2:+77759937 MS.gene93877:CDS
AACCTTCTCATGCTCATCGT+TGG 0.561672 1.2:+77759932 MS.gene93877:CDS
GTCGTCTGTCTCAAGACCGT+TGG 0.563013 1.2:-77759710 None:intergenic
GCTGAAGCCTCCTCCCGTCA+TGG 0.565815 1.2:-77759266 None:intergenic
TTGAAGGTGCAATCTCTGAA+AGG 0.568570 1.2:-77761933 None:intergenic
TGCATAATGGCTGCCACCGG+AGG 0.573918 1.2:+77759343 MS.gene93877:CDS
GAGGTCGGTTATTGCGCTTG+AGG 0.575455 1.2:-77763087 None:intergenic
CGAAAGCTATTACTCGAAGC+TGG 0.575954 1.2:+77763609 MS.gene93877:CDS
CAACTCGAGTACTAGGAAGA+AGG 0.577102 1.2:+77759846 MS.gene93877:CDS
ATGACGGGAGGAGGCTTCAG+CGG 0.582980 1.2:+77759268 MS.gene93877:CDS
GCTGTTCTGAGAAAGATTCG+TGG 0.584754 1.2:+77762980 MS.gene93877:CDS
ACGGGAGGAGGCTTCAGCGG+CGG 0.586483 1.2:+77759271 MS.gene93877:CDS
GTGCAATGACAGCAGTGAAG+AGG 0.587387 1.2:-77763863 None:intergenic
CGCTTGAGGAGATTTCTGAA+CGG 0.588562 1.2:-77763073 None:intergenic
TAGGGACATTCTTTGTCTCA+GGG 0.588827 1.2:-77763983 None:intergenic
TCATGCATAATGGCTGCCAC+CGG 0.589627 1.2:+77759340 MS.gene93877:CDS
CTAAAGTGAGGAGTAATGCT+GGG 0.591713 1.2:-77762892 None:intergenic
CGAGTTCTTAGAGTTAGTAG+AGG 0.593514 1.2:+77763021 MS.gene93877:CDS
ATGGTGATAGCAATTGTACT+AGG 0.593741 1.2:+77763654 MS.gene93877:CDS
ATTCTGAGGAACTCTCGAAA+GGG 0.594512 1.2:+77763694 MS.gene93877:CDS
GACAAGATCATTTCTGCTAG+GGG 0.594712 1.2:-77764105 None:intergenic
CATTCTGAGGAACTCTCGAA+AGG 0.596408 1.2:+77763693 MS.gene93877:CDS
GACAGACGACGGAATCAGAT+GGG 0.599473 1.2:+77759723 MS.gene93877:CDS
CTCTGAAAGGAAAACTGGCA+CGG 0.599482 1.2:-77761920 None:intergenic
CCTGCAGAACGAGTCTCTAG+TGG 0.601195 1.2:-77763813 None:intergenic
TCTTTGCATAACAGAATCAA+AGG 0.602087 1.2:+77762830 MS.gene93877:intron
AAGTGAATAGCTGCAACCCT+TGG 0.602447 1.2:-77759775 None:intergenic
ATATATTCGGTTGATAAACT+GGG 0.603944 1.2:+77763582 MS.gene93877:CDS
GCAGAAATGATCTTGTCTCT+CGG 0.606295 1.2:+77764111 MS.gene93877:CDS
ATAACCAAACATAAGACCTC+CGG 0.610933 1.2:-77759359 None:intergenic
TGTTGGTGGCATAGTTGACA+AGG 0.611158 1.2:-77762020 None:intergenic
AGGATATCTCTGGGATTGGG+AGG 0.614479 1.2:+77762866 MS.gene93877:CDS
ATTGAAGATGAGAAAGTACC+TGG 0.615199 1.2:+77764074 MS.gene93877:CDS
TCAGCATTTGCATGGTCATG+GGG 0.621192 1.2:+77763756 MS.gene93877:CDS
TCGTTCAATGAGACTATTTG+GGG 0.623479 1.2:-77762936 None:intergenic
CAAAGTGAAGGACCATTCTG+AGG 0.625954 1.2:+77763680 MS.gene93877:CDS
GCAATGGAAATGACAAGTTG+AGG 0.629289 1.2:-77763106 None:intergenic
TACTGCAAATACGATAACCA+AGG 0.630998 1.2:+77759758 MS.gene93877:CDS
AAGAACTTCTTCAAGAAGGG+TGG 0.634008 1.2:-77759686 None:intergenic
TCTGAGAAAGATTCGTGGCA+CGG 0.641034 1.2:+77762985 MS.gene93877:CDS
TCTACTAACTCTAAGAACTC+GGG 0.642028 1.2:-77763019 None:intergenic
TGTACTAGGAATCAAAGTGA+AGG 0.642063 1.2:+77763668 MS.gene93877:CDS
CCAAGTAAGCCCCTAAAGTG+AGG 0.643291 1.2:-77762904 None:intergenic
TGGAAATGACAAGTTGAGGT+CGG 0.646516 1.2:-77763102 None:intergenic
ACTGCAAATACGATAACCAA+GGG 0.652200 1.2:+77759759 MS.gene93877:CDS
TACCAACGATGAGCATGAGA+AGG 0.652678 1.2:-77759934 None:intergenic
CTTGGAATAAGCCAAGCAAG+TGG 0.653091 1.2:-77763780 None:intergenic
AACAGAATCAAAGGTCATTG+GGG 0.657099 1.2:+77762839 MS.gene93877:intron
ACCAAACATAAGACCTCCGG+TGG 0.683703 1.2:-77759356 None:intergenic
CCAAATAGTCTCATTGAACG+AGG 0.684087 1.2:+77762938 MS.gene93877:CDS
AAATAATTAACCATGACGGG+AGG 0.694207 1.2:+77759256 None:intergenic
ATTGCACCTTCAAGAATACG+TGG 0.700035 1.2:+77761943 MS.gene93877:CDS
GAAGATGAGAAAGTACCTGG+TGG 0.714138 1.2:+77764077 MS.gene93877:CDS
AACGGTCTTGAGACAGACGA+CGG 0.737114 1.2:+77759712 MS.gene93877:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTTATATTTTTAT+AGG + chr1.2:77762621-77762640 MS.gene93877:intron 0.0%
!! AACCAAAAAAAAAATTAAAA+GGG - chr1.2:77762260-77762279 None:intergenic 10.0%
!! ACTATTGAAATATAATTAAA+AGG - chr1.2:77762291-77762310 None:intergenic 10.0%
!! CTATTGAAATATAATTAAAA+GGG - chr1.2:77762290-77762309 None:intergenic 10.0%
!! TAACCAAAAAAAAAATTAAA+AGG - chr1.2:77762261-77762280 None:intergenic 10.0%
!!! AATTAGAATTATATTTTTGA+AGG - chr1.2:77759483-77759502 None:intergenic 10.0%
!!! AATTGATTTTACATTTATTT+TGG + chr1.2:77762165-77762184 MS.gene93877:intron 10.0%
!!! CTAAGTAAAAATAATAATTT+TGG + chr1.2:77762423-77762442 MS.gene93877:intron 10.0%
!!! TATAAGTTAAATTTTGTTTT+GGG - chr1.2:77760997-77761016 None:intergenic 10.0%
!!! TTATAAGTTAAATTTTGTTT+TGG - chr1.2:77760998-77761017 None:intergenic 10.0%
!! AAATAATATAAAGATTTCCT+TGG + chr1.2:77761427-77761446 MS.gene93877:intron 15.0%
!! AATAATATAAAGATTTCCTT+GGG + chr1.2:77761428-77761447 MS.gene93877:intron 15.0%
!! ATAAATAAATAAAGGTTTCT+TGG + chr1.2:77761462-77761481 MS.gene93877:intron 15.0%
!! ATAGCAAAATTTGTATTTAT+TGG + chr1.2:77761082-77761101 MS.gene93877:intron 15.0%
!! ATCAATAAAAGGTTATAAAA+AGG - chr1.2:77763340-77763359 None:intergenic 15.0%
!! TCAATAAAAGGTTATAAAAA+GGG - chr1.2:77763339-77763358 None:intergenic 15.0%
!! TTCTATATTAAGAATTTCTT+TGG - chr1.2:77762699-77762718 None:intergenic 15.0%
!!! ATAATTTCACATATTTTACA+TGG + chr1.2:77760257-77760276 MS.gene93877:intron 15.0%
!!! ATTCATAAATTTTATGTAGT+GGG - chr1.2:77760093-77760112 None:intergenic 15.0%
!!! ATTTCACATTTTAAATACAA+TGG + chr1.2:77760221-77760240 MS.gene93877:intron 15.0%
!!! GATATTTATTTTGAAATTGA+AGG - chr1.2:77760130-77760149 None:intergenic 15.0%
!!! TTTATAGTACTATTTTCTTA+TGG + chr1.2:77759538-77759557 MS.gene93877:intron 15.0%
!! AAGATTATTACAAACCATTA+GGG - chr1.2:77763131-77763150 None:intergenic 20.0%
!! ATAATTCAGCTATCAATAAA+AGG - chr1.2:77763351-77763370 None:intergenic 20.0%
!! GGTATAGATATAATAATCTA+AGG + chr1.2:77761325-77761344 MS.gene93877:intron 20.0%
!! TAACAAAACATATCTTATGA+TGG + chr1.2:77759618-77759637 MS.gene93877:intron 20.0%
!! TAAGATTATTACAAACCATT+AGG - chr1.2:77763132-77763151 None:intergenic 20.0%
!! TGACATATTAGTTCATTAAT+TGG + chr1.2:77762079-77762098 MS.gene93877:intron 20.0%
!! TTATATAAAAGTCTAACACA+GGG + chr1.2:77762188-77762207 MS.gene93877:intron 20.0%
!!! AAGCATATGTGTTATAATTT+TGG - chr1.2:77762655-77762674 None:intergenic 20.0%
!!! AATTACTTTTATCTTACGAT+TGG - chr1.2:77761231-77761250 None:intergenic 20.0%
!!! ACAAAAATTATAGTCACTTT+AGG + chr1.2:77761124-77761143 MS.gene93877:intron 20.0%
!!! GATTCATAAATTTTATGTAG+TGG - chr1.2:77760094-77760113 None:intergenic 20.0%
!!! TAGGTTTTGTAATTTTTATC+AGG + chr1.2:77760447-77760466 MS.gene93877:intron 20.0%
!!! TCTTATTTTAGTCATAACTT+TGG + chr1.2:77761738-77761757 MS.gene93877:intron 20.0%
!!! TGCCCTTTTAATTTTTTTTT+TGG + chr1.2:77762255-77762274 MS.gene93877:intron 20.0%
!!! TGGTTGATTTAATTGTTTTA+AGG + chr1.2:77759647-77759666 MS.gene93877:intron 20.0%
!!! TTGATTTAATTGTTTTAAGG+CGG + chr1.2:77759650-77759669 MS.gene93877:intron 20.0%
!!! TTTACATGGATTTTTAAAGT+TGG + chr1.2:77760271-77760290 MS.gene93877:intron 20.0%
! AAAATCAAATTACACTAACC+TGG - chr1.2:77759994-77760013 None:intergenic 25.0%
! AACGATAGTCTCAATATATT+CGG + chr1.2:77763569-77763588 MS.gene93877:CDS 25.0%
! AAGGATGCAATACAATTATA+AGG - chr1.2:77762054-77762073 None:intergenic 25.0%
! AGTATTACTTAAGGAATCAA+AGG - chr1.2:77761770-77761789 None:intergenic 25.0%
! ATAAAAAAACTAAGATGTCG+TGG + chr1.2:77763294-77763313 MS.gene93877:intron 25.0%
! ATTATAAGGAACTTACTTGT+TGG - chr1.2:77762040-77762059 None:intergenic 25.0%
! ATTCACTTCATCATTGTATT+TGG + chr1.2:77759790-77759809 MS.gene93877:CDS 25.0%
! CATTATCATTTCATGCATAA+TGG + chr1.2:77759330-77759349 MS.gene93877:CDS 25.0%
! CTATCATATTATCTATGCTT+AGG - chr1.2:77763167-77763186 None:intergenic 25.0%
! GAACTAATATGTCAAACAAA+AGG - chr1.2:77762073-77762092 None:intergenic 25.0%
! GTTATATAAAAGTCTAACAC+AGG + chr1.2:77762187-77762206 MS.gene93877:intron 25.0%
! TATCCTAAACTTTCAATCAA+TGG + chr1.2:77761304-77761323 MS.gene93877:intron 25.0%
! TCATTAATGTTGCTCAAATA+TGG + chr1.2:77763407-77763426 MS.gene93877:intron 25.0%
! TGAAAACATTCATAAATCAC+AGG + chr1.2:77761038-77761057 MS.gene93877:intron 25.0%
! TGGATCGAAAAAAAAAAACA+TGG + chr1.2:77760291-77760310 MS.gene93877:intron 25.0%
! TTCAAACCTTAATATGTGTT+TGG + chr1.2:77759452-77759471 MS.gene93877:intron 25.0%
! TTTGAGCAACATTAATGAAA+AGG - chr1.2:77763405-77763424 None:intergenic 25.0%
!! ACTATTTGTCTAGAGTAAAT+TGG - chr1.2:77762765-77762784 None:intergenic 25.0%
!! ATACCATTGATTGAAAGTTT+AGG - chr1.2:77761310-77761329 None:intergenic 25.0%
!! ATGCATGAAATGATAATGAT+AGG - chr1.2:77759328-77759347 None:intergenic 25.0%
!! CTAAGTGTAACAATTTTACA+TGG + chr1.2:77760182-77760201 MS.gene93877:intron 25.0%
!! TACTATTTTCTTATGGAAAG+TGG + chr1.2:77759545-77759564 MS.gene93877:intron 25.0%
!! TATTTTCGCTATTGCAATTA+GGG - chr1.2:77763277-77763296 None:intergenic 25.0%
!! TCACTTTAGGAAAAACAAAA+AGG + chr1.2:77761137-77761156 MS.gene93877:intron 25.0%
!! TTATTTTCGCTATTGCAATT+AGG - chr1.2:77763278-77763297 None:intergenic 25.0%
!!! AATATATTCGGTTGATAAAC+TGG + chr1.2:77763581-77763600 MS.gene93877:CDS 25.0%
!!! ACAATTTTATTGTTTTGTCC+AGG - chr1.2:77762236-77762255 None:intergenic 25.0%
!!! ACCAAAAGGTTTTAAAAGTT+CGG - chr1.2:77761397-77761416 None:intergenic 25.0%
!!! AGTCACTAATATTGTTTTGA+TGG + chr1.2:77761890-77761909 MS.gene93877:intron 25.0%
!!! ATATATTCGGTTGATAAACT+GGG + chr1.2:77763582-77763601 MS.gene93877:CDS 25.0%
!!! ATATCTTATGATGGATGATA+TGG + chr1.2:77759627-77759646 MS.gene93877:intron 25.0%
!!! ATGCTTTGTTATTTCAAGTT+TGG + chr1.2:77763900-77763919 MS.gene93877:CDS 25.0%
!!! TATTTATTTTTTGTGCGACA+TGG - chr1.2:77760038-77760057 None:intergenic 25.0%
!!! TGAAATAACAAAGCATTGAA+AGG - chr1.2:77763896-77763915 None:intergenic 25.0%
!!! TGCTAACTTTTTCATCTAAT+TGG + chr1.2:77760969-77760988 MS.gene93877:intron 25.0%
!!! TTTATTTTTACAAAGTCCCA+AGG - chr1.2:77761447-77761466 None:intergenic 25.0%
AACCTTAATATGTGTTTGGT+CGG + chr1.2:77759456-77759475 MS.gene93877:intron 30.0%
AGAAAAAGAATGATGCATAG+TGG + chr1.2:77761368-77761387 MS.gene93877:intron 30.0%
AGAATACTTTCATGCCAAAA+AGG - chr1.2:77761532-77761551 None:intergenic 30.0%
ATAACAGAATCAAAGGTCAT+TGG + chr1.2:77762837-77762856 MS.gene93877:intron 30.0%
ATAGAGATAGCTACAATGAA+TGG - chr1.2:77761719-77761738 None:intergenic 30.0%
CATAGATAATATGATAGCCA+AGG + chr1.2:77763170-77763189 MS.gene93877:intron 30.0%
CATCATTAGGAGACAAAAAT+AGG + chr1.2:77760428-77760447 MS.gene93877:intron 30.0%
CTTATGTTTGGTTATGATGT+TGG + chr1.2:77759367-77759386 MS.gene93877:CDS 30.0%
GAAAGAAGTTAGCATTCATT+AGG - chr1.2:77759404-77759423 None:intergenic 30.0%
GCTAAAAATTCGAGAATTGT+GGG + chr1.2:77762539-77762558 MS.gene93877:intron 30.0%
GTAGCATACAGTATTACTTA+AGG - chr1.2:77761779-77761798 None:intergenic 30.0%
TAACAGAATCAAAGGTCATT+GGG + chr1.2:77762838-77762857 MS.gene93877:intron 30.0%
TACTCTTACACTAGTGAAAT+TGG - chr1.2:77759577-77759596 None:intergenic 30.0%
TACTGTTGTGTGTATATACT+AGG + chr1.2:77760496-77760515 MS.gene93877:intron 30.0%
TCAAATGTTCTTGTCACAAA+TGG + chr1.2:77763635-77763654 MS.gene93877:CDS 30.0%
TCACACTTTGTGATAACAAT+TGG + chr1.2:77761859-77761878 MS.gene93877:intron 30.0%
TCTTTGCATAACAGAATCAA+AGG + chr1.2:77762830-77762849 MS.gene93877:intron 30.0%
TTGGACTTATGCTAATAGTA+AGG + chr1.2:77761101-77761120 MS.gene93877:intron 30.0%
TTTGTGTCATCTCTTCAATA+GGG - chr1.2:77764004-77764023 None:intergenic 30.0%
! ACGCATACATTTTATATGCT+CGG - chr1.2:77762578-77762597 None:intergenic 30.0%
! TTTTGTGTCATCTCTTCAAT+AGG - chr1.2:77764005-77764024 None:intergenic 30.0%
!! ACTAGGAGAAATGTTTTTGA+TGG + chr1.2:77760513-77760532 MS.gene93877:intron 30.0%
!!! AATATTGTTTTGATGGAGAC+AGG + chr1.2:77761897-77761916 MS.gene93877:intron 30.0%
!!! ATAGCCAAGGTTTTAATTCA+TGG + chr1.2:77763183-77763202 MS.gene93877:intron 30.0%
!!! GAACTTTTAAAACCTTTTGG+TGG + chr1.2:77761396-77761415 MS.gene93877:intron 30.0%
!!! TTGTGATAACAATTGGCTTT+TGG + chr1.2:77761866-77761885 MS.gene93877:intron 30.0%
!!! TTTTTTGAGGGAACAATGAA+TGG - chr1.2:77761682-77761701 None:intergenic 30.0%
AAATGAAATCATGCCCAAAG+TGG - chr1.2:77761594-77761613 None:intergenic 35.0%
AACAGAATCAAAGGTCATTG+GGG + chr1.2:77762839-77762858 MS.gene93877:intron 35.0%
AACTGGAGCATAGAACATTA+TGG - chr1.2:77763472-77763491 None:intergenic 35.0%
AAGAGATGACACAAAAAGTG+TGG + chr1.2:77764009-77764028 MS.gene93877:CDS 35.0%
ACTGCAAATACGATAACCAA+GGG + chr1.2:77759759-77759778 MS.gene93877:CDS 35.0%
ACTTCATCATTGTATTTGGC+GGG + chr1.2:77759794-77759813 MS.gene93877:CDS 35.0%
AGACAAGATCATTTCTGCTA+GGG - chr1.2:77764109-77764128 None:intergenic 35.0%
AGACTGATTAAGACTTTGTG+TGG - chr1.2:77761491-77761510 None:intergenic 35.0%
AGATCCTTGTGTACATCATT+AGG + chr1.2:77760415-77760434 MS.gene93877:intron 35.0%
ATAAAAGTCTAACACAGGGT+CGG + chr1.2:77762192-77762211 MS.gene93877:intron 35.0%
ATAACCAAACATAAGACCTC+CGG - chr1.2:77759362-77759381 None:intergenic 35.0%
ATACTTTCATGCCAAAAAGG+TGG - chr1.2:77761529-77761548 None:intergenic 35.0%
ATGGTGATAGCAATTGTACT+AGG + chr1.2:77763654-77763673 MS.gene93877:CDS 35.0%
ATTACAAACCATTAGGGCAA+TGG - chr1.2:77763125-77763144 None:intergenic 35.0%
ATTGCATCCGTTAAAATCCA+TGG - chr1.2:77760348-77760367 None:intergenic 35.0%
CACTTCATCATTGTATTTGG+CGG + chr1.2:77759793-77759812 MS.gene93877:CDS 35.0%
CAGATATTTCAGCAATTCAC+TGG + chr1.2:77763438-77763457 MS.gene93877:intron 35.0%
CTCGTTCAATGAGACTATTT+GGG - chr1.2:77762940-77762959 None:intergenic 35.0%
CTTGAAGAAGTTCTTTCCAA+CGG + chr1.2:77759694-77759713 MS.gene93877:CDS 35.0%
GACATGGTTAGATAACCTAA+GGG - chr1.2:77760022-77760041 None:intergenic 35.0%
GACTGATTAAGACTTTGTGT+GGG - chr1.2:77761490-77761509 None:intergenic 35.0%
GCAACCATGAATTAAAACCT+TGG - chr1.2:77763190-77763209 None:intergenic 35.0%
GGAAAGAACTTCTTCAAGAA+GGG - chr1.2:77759692-77759711 None:intergenic 35.0%
GGCTAAAAATTCGAGAATTG+TGG + chr1.2:77762538-77762557 MS.gene93877:intron 35.0%
TACTGCAAATACGATAACCA+AGG + chr1.2:77759758-77759777 MS.gene93877:CDS 35.0%
TCGTTCAATGAGACTATTTG+GGG - chr1.2:77762939-77762958 None:intergenic 35.0%
TCTAGTGGAAATATCTCACT+TGG - chr1.2:77763801-77763820 None:intergenic 35.0%
TCTTATACAACTCGAGTACT+AGG + chr1.2:77759839-77759858 MS.gene93877:CDS 35.0%
TGGAAAGAACTTCTTCAAGA+AGG - chr1.2:77759693-77759712 None:intergenic 35.0%
TGTACTAGGAATCAAAGTGA+AGG + chr1.2:77763668-77763687 MS.gene93877:CDS 35.0%
TTTCAGCTTGATATCACTCT+TGG + chr1.2:77761982-77762001 MS.gene93877:CDS 35.0%
! ATAAGGAACTTACTTGTTGG+TGG - chr1.2:77762037-77762056 None:intergenic 35.0%
! ATTTGTTAGTTGCCACCAAA+AGG - chr1.2:77761411-77761430 None:intergenic 35.0%
! CTACAAACGATACACGATTT+TGG + chr1.2:77761795-77761814 MS.gene93877:intron 35.0%
! CTCTACTAACTCTAAGAACT+CGG - chr1.2:77763023-77763042 None:intergenic 35.0%
! GATGTCTCCATGGATTTTAA+CGG + chr1.2:77760338-77760357 MS.gene93877:intron 35.0%
! GGTATCTTCTTTTTCTTCTC+TGG + chr1.2:77763921-77763940 MS.gene93877:CDS 35.0%
! TCTACTAACTCTAAGAACTC+GGG - chr1.2:77763022-77763041 None:intergenic 35.0%
! TCTTCTTTTTCTTCTCTGGT+TGG + chr1.2:77763925-77763944 MS.gene93877:CDS 35.0%
! TTTTTGTGTCAGCATTTGCA+TGG + chr1.2:77763748-77763767 MS.gene93877:CDS 35.0%
!! ATTGAAGATGAGAAAGTACC+TGG + chr1.2:77764074-77764093 MS.gene93877:CDS 35.0%
!! ATTGTATTTGGCGGGTTTAA+CGG + chr1.2:77759802-77759821 MS.gene93877:CDS 35.0%
!! ATTTGATTTTGCTCTCCCTT+AGG + chr1.2:77760004-77760023 MS.gene93877:intron 35.0%
!! TGAAATTGAAGGAGTGTTAG+TGG - chr1.2:77760119-77760138 None:intergenic 35.0%
!!! GCCGAACTTTTAAAACCTTT+TGG + chr1.2:77761393-77761412 MS.gene93877:intron 35.0%
!!! TTAATTGTTTTAAGGCGGTG+TGG + chr1.2:77759655-77759674 MS.gene93877:intron 35.0%
!!! TTTTGGTGCCCCTAAAATAA+TGG + chr1.2:77762440-77762459 MS.gene93877:intron 35.0%
AAGAACTTCTTCAAGAAGGG+TGG - chr1.2:77759689-77759708 None:intergenic 40.0%
AAGAGTTTCGTTGTTAGACC+AGG - chr1.2:77762508-77762527 None:intergenic 40.0%
AATGCTCCACGTATTCTTGA+AGG - chr1.2:77761952-77761971 None:intergenic 40.0%
ACGAAACTCTTGCACACTAA+AGG + chr1.2:77762517-77762536 MS.gene93877:intron 40.0%
AGAACCACGTGTTCACTAAA+AGG - chr1.2:77761181-77761200 None:intergenic 40.0%
AGAGTTTCGTTGTTAGACCA+GGG - chr1.2:77762507-77762526 None:intergenic 40.0%
AGCATTACTCCTCACTTTAG+GGG + chr1.2:77762895-77762914 MS.gene93877:CDS 40.0%
AGTTGTATAAGACGCGAAGA+AGG - chr1.2:77759831-77759850 None:intergenic 40.0%
ATAGGGACATTCTTTGTCTC+AGG - chr1.2:77763987-77764006 None:intergenic 40.0%
ATGCCAAAAAGGTGGATATG+GGG - chr1.2:77761521-77761540 None:intergenic 40.0%
ATTGCACCTTCAAGAATACG+TGG + chr1.2:77761943-77761962 MS.gene93877:CDS 40.0%
CAGCATTACTCCTCACTTTA+GGG + chr1.2:77762894-77762913 MS.gene93877:CDS 40.0%
CATGCCAAAAAGGTGGATAT+GGG - chr1.2:77761522-77761541 None:intergenic 40.0%
CCAAATAGTCTCATTGAACG+AGG + chr1.2:77762938-77762957 MS.gene93877:CDS 40.0%
CCAGTTCTGTTCAACACATT+GGG + chr1.2:77763486-77763505 MS.gene93877:CDS 40.0%
CCTCGTTCAATGAGACTATT+TGG - chr1.2:77762941-77762960 None:intergenic 40.0%
CGACATGGTTAGATAACCTA+AGG - chr1.2:77760023-77760042 None:intergenic 40.0%
CGAGTTCTTAGAGTTAGTAG+AGG + chr1.2:77763021-77763040 MS.gene93877:CDS 40.0%
CTAAAGTGAGGAGTAATGCT+GGG - chr1.2:77762895-77762914 None:intergenic 40.0%
CTTTACTCTGCTGTGATTAC+TGG + chr1.2:77763528-77763547 MS.gene93877:CDS 40.0%
GACAAGATCATTTCTGCTAG+GGG - chr1.2:77764108-77764127 None:intergenic 40.0%
GACCGACCAAACACATATTA+AGG - chr1.2:77759461-77759480 None:intergenic 40.0%
GAGACAAGATCATTTCTGCT+AGG - chr1.2:77764110-77764129 None:intergenic 40.0%
GCAATGGAAATGACAAGTTG+AGG - chr1.2:77763109-77763128 None:intergenic 40.0%
GCAGAAATGATCTTGTCTCT+CGG + chr1.2:77764111-77764130 MS.gene93877:CDS 40.0%
GGTTATGATGTTGGAGTTTC+AGG + chr1.2:77759376-77759395 MS.gene93877:CDS 40.0%
GTCTCCTAATGATGTACACA+AGG - chr1.2:77760422-77760441 None:intergenic 40.0%
TAGGGACATTCTTTGTCTCA+GGG - chr1.2:77763986-77764005 None:intergenic 40.0%
TCATGCCAAAAAGGTGGATA+TGG - chr1.2:77761523-77761542 None:intergenic 40.0%
TCCAGGACACCAAAAATCTT+AGG - chr1.2:77762219-77762238 None:intergenic 40.0%
TCCAGTTCTGTTCAACACAT+TGG + chr1.2:77763485-77763504 MS.gene93877:CDS 40.0%
TGGAATTGGATTTGCAAACC+AGG + chr1.2:77759973-77759992 MS.gene93877:CDS 40.0%
TTATGAGTCATGACACTTGC+TGG + chr1.2:77761565-77761584 MS.gene93877:intron 40.0%
TTTCGCTATTGCAATTAGGG+CGG - chr1.2:77763274-77763293 None:intergenic 40.0%
! AAAAAGTGTGGAAGCAGCAT+TGG + chr1.2:77764021-77764040 MS.gene93877:CDS 40.0%
! ATTCTGAGGAACTCTCGAAA+GGG + chr1.2:77763694-77763713 MS.gene93877:CDS 40.0%
! GCAATCTCTGAAAGGAAAAC+TGG - chr1.2:77761928-77761947 None:intergenic 40.0%
! TGGAAATGACAAGTTGAGGT+CGG - chr1.2:77763105-77763124 None:intergenic 40.0%
! TGTCATTTCCATTGCCCTAA+TGG + chr1.2:77763114-77763133 MS.gene93877:CDS 40.0%
! TTGAAGGTGCAATCTCTGAA+AGG - chr1.2:77761936-77761955 None:intergenic 40.0%
!!! TCCTAAGATTTTTGGTGTCC+TGG + chr1.2:77762215-77762234 MS.gene93877:intron 40.0%
AACCTTCTCATGCTCATCGT+TGG + chr1.2:77759932-77759951 MS.gene93877:CDS 45.0%
AAGTGAATAGCTGCAACCCT+TGG - chr1.2:77759778-77759797 None:intergenic 45.0%
AGGGTCTGCAATTGCAATTG+TGG - chr1.2:77763320-77763339 None:intergenic 45.0%
CAAAGTGAAGGACCATTCTG+AGG + chr1.2:77763680-77763699 MS.gene93877:CDS 45.0%
CAACTCGAGTACTAGGAAGA+AGG + chr1.2:77759846-77759865 MS.gene93877:CDS 45.0%
CATTCTTTGTCTCAGGGACA+AGG - chr1.2:77763980-77763999 None:intergenic 45.0%
CCAGCATTACTCCTCACTTT+AGG + chr1.2:77762893-77762912 MS.gene93877:CDS 45.0%
CCCAATGTGTTGAACAGAAC+TGG - chr1.2:77763489-77763508 None:intergenic 45.0%
CCCTAAAATAATGGTGCCCT+GGG + chr1.2:77762449-77762468 MS.gene93877:intron 45.0%
CCTAAAGTGAGGAGTAATGC+TGG - chr1.2:77762896-77762915 None:intergenic 45.0%
CGAAAGCTATTACTCGAAGC+TGG + chr1.2:77763609-77763628 MS.gene93877:CDS 45.0%
CGCTTGAGGAGATTTCTGAA+CGG - chr1.2:77763076-77763095 None:intergenic 45.0%
CTTGGAATAAGCCAAGCAAG+TGG - chr1.2:77763783-77763802 None:intergenic 45.0%
CTTTCGAGAGTTCCTCAGAA+TGG - chr1.2:77763695-77763714 None:intergenic 45.0%
GAATCAAAGGTCATTGGGGT+TGG + chr1.2:77762843-77762862 MS.gene93877:intron 45.0%
GAGTTTCGTTGTTAGACCAG+GGG - chr1.2:77762506-77762525 None:intergenic 45.0%
GTACTATTGCGATGTCTCCA+TGG + chr1.2:77760328-77760347 MS.gene93877:intron 45.0%
GTCAGCATTTGCATGGTCAT+GGG + chr1.2:77763755-77763774 MS.gene93877:CDS 45.0%
GTCTTACTTGGCTGTGGAAT+TGG + chr1.2:77759959-77759978 MS.gene93877:CDS 45.0%
TACCAACGATGAGCATGAGA+AGG - chr1.2:77759937-77759956 None:intergenic 45.0%
TCAGCATTTGCATGGTCATG+GGG + chr1.2:77763756-77763775 MS.gene93877:CDS 45.0%
TCTCATGCTCATCGTTGGTA+GGG + chr1.2:77759937-77759956 MS.gene93877:CDS 45.0%
TCTCATTGAACGAGGTCACT+TGG + chr1.2:77762946-77762965 MS.gene93877:CDS 45.0%
TCTGAGAAAGATTCGTGGCA+CGG + chr1.2:77762985-77763004 MS.gene93877:CDS 45.0%
TGCAGCTCTTGTAGTTGTGA+TGG + chr1.2:77763719-77763738 MS.gene93877:CDS 45.0%
TGTCAGCATTTGCATGGTCA+TGG + chr1.2:77763754-77763773 MS.gene93877:CDS 45.0%
TTCTCATGCTCATCGTTGGT+AGG + chr1.2:77759936-77759955 MS.gene93877:CDS 45.0%
TTTAGGGGCTTACTTGGTAG+TGG + chr1.2:77762910-77762929 MS.gene93877:CDS 45.0%
! AGGGTCGGTCCTAAGATTTT+TGG + chr1.2:77762207-77762226 MS.gene93877:intron 45.0%
! ATCGTTGGTAGGGTCTTACT+TGG + chr1.2:77759947-77759966 MS.gene93877:CDS 45.0%
! CAACCCCATATCCACCTTTT+TGG + chr1.2:77761515-77761534 MS.gene93877:intron 45.0%
! CATTCTGAGGAACTCTCGAA+AGG + chr1.2:77763693-77763712 MS.gene93877:CDS 45.0%
! CTCACCTTTTAGTGAACACG+TGG + chr1.2:77761174-77761193 MS.gene93877:intron 45.0%
! CTCTGAAAGGAAAACTGGCA+CGG - chr1.2:77761923-77761942 None:intergenic 45.0%
!! CCCAGGGCACCATTATTTTA+GGG - chr1.2:77762452-77762471 None:intergenic 45.0%
!! GAAGATGAGAAAGTACCTGG+TGG + chr1.2:77764077-77764096 MS.gene93877:CDS 45.0%
!! GCTGTTCTGAGAAAGATTCG+TGG + chr1.2:77762980-77762999 MS.gene93877:CDS 45.0%
!! TGGAGGATATCTCTGGGATT+GGG + chr1.2:77762863-77762882 MS.gene93877:CDS 45.0%
!! TGTTGGTGGCATAGTTGACA+AGG - chr1.2:77762023-77762042 None:intergenic 45.0%
!! TTGGAGGATATCTCTGGGAT+TGG + chr1.2:77762862-77762881 MS.gene93877:CDS 45.0%
!!! AGCAGCATTGGTTTTGGAAG+AGG + chr1.2:77764033-77764052 MS.gene93877:CDS 45.0%
!!! CCAGGGCACCATTATTTTAG+GGG - chr1.2:77762451-77762470 None:intergenic 45.0%
!!! TGTGGAAGCAGCATTGGTTT+TGG + chr1.2:77764027-77764046 MS.gene93877:CDS 45.0%
!! TTGTAAAAATAAATAAATAA+AGG + chr1.2:77761454-77761473 MS.gene93877:intron 5.0%
!!! ACTATATATATATTTTAATT+CGG - chr1.2:77762395-77762414 None:intergenic 5.0%
!!! ATTTTTTTTTTTTTTTTTTG+AGG - chr1.2:77761695-77761714 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG - chr1.2:77761694-77761713 None:intergenic 5.0%
AACGGTCTTGAGACAGACGA+CGG + chr1.2:77759712-77759731 MS.gene93877:CDS 50.0%
ACCAAACATAAGACCTCCGG+TGG - chr1.2:77759359-77759378 None:intergenic 50.0%
AGACAGACGACGGAATCAGA+TGG + chr1.2:77759722-77759741 MS.gene93877:CDS 50.0%
AGGCTCACAATGTTGATCGC+TGG + chr1.2:77759866-77759885 MS.gene93877:CDS 50.0%
CACTAGAGACTCGTTCTGCA+GGG + chr1.2:77763814-77763833 MS.gene93877:CDS 50.0%
CCAAGTAAGCCCCTAAAGTG+AGG - chr1.2:77762907-77762926 None:intergenic 50.0%
CCCCTAAAATAATGGTGCCC+TGG + chr1.2:77762448-77762467 MS.gene93877:intron 50.0%
CGGCAACGACAGAGAATTTG+AGG + chr1.2:77759291-77759310 MS.gene93877:CDS 50.0%
GAACGAGGTCACTTGGACAA+AGG + chr1.2:77762953-77762972 MS.gene93877:CDS 50.0%
GACAGACGACGGAATCAGAT+GGG + chr1.2:77759723-77759742 MS.gene93877:CDS 50.0%
GTGCAATGACAGCAGTGAAG+AGG - chr1.2:77763866-77763885 None:intergenic 50.0%
TCAAAGGTCATTGGGGTTGG+AGG + chr1.2:77762846-77762865 MS.gene93877:CDS 50.0%
TCATGCATAATGGCTGCCAC+CGG + chr1.2:77759340-77759359 MS.gene93877:CDS 50.0%
TGGGGTTGGAGGATATCTCT+GGG + chr1.2:77762857-77762876 MS.gene93877:CDS 50.0%
TTGGGGTTGGAGGATATCTC+TGG + chr1.2:77762856-77762875 MS.gene93877:CDS 50.0%
TTTCGTTGTTAGACCAGGGG+TGG - chr1.2:77762503-77762522 None:intergenic 50.0%
! ACACTTGCTGGTGACCACTT+TGG + chr1.2:77761577-77761596 MS.gene93877:intron 50.0%
! CACTTGCTGGTGACCACTTT+GGG + chr1.2:77761578-77761597 MS.gene93877:intron 50.0%
! CCTCACTTTAGGGGCTTACT+TGG + chr1.2:77762904-77762923 MS.gene93877:CDS 50.0%
! GCTGGCTTCTTCTTCATAGC+TGG + chr1.2:77759884-77759903 MS.gene93877:CDS 50.0%
! GGCAAGTCGTGTTGCTAAAG+AGG + chr1.2:77763042-77763061 MS.gene93877:CDS 50.0%
!! AGGATATCTCTGGGATTGGG+AGG + chr1.2:77762866-77762885 MS.gene93877:CDS 50.0%
!! GCCCAGGGCACCATTATTTT+AGG - chr1.2:77762453-77762472 None:intergenic 50.0%
CCACTAGAGACTCGTTCTGC+AGG + chr1.2:77763813-77763832 MS.gene93877:CDS 55.0%
CCTGCAGAACGAGTCTCTAG+TGG - chr1.2:77763816-77763835 None:intergenic 55.0%
CTGCTAGGGGAATTTCCACC+AGG - chr1.2:77764095-77764114 None:intergenic 55.0%
GAGGTCGGTTATTGCGCTTG+AGG - chr1.2:77763090-77763109 None:intergenic 55.0%
GGTAGGGTCTTACTTGGCTG+TGG + chr1.2:77759953-77759972 MS.gene93877:CDS 55.0%
GTCGTCTGTCTCAAGACCGT+TGG - chr1.2:77759713-77759732 None:intergenic 55.0%
! GCCACCGGAGGTCTTATGTT+TGG + chr1.2:77759355-77759374 MS.gene93877:CDS 55.0%
GGTCATGGGGTCCACTTGCT+TGG + chr1.2:77763769-77763788 MS.gene93877:CDS 60.0%
TGCATAATGGCTGCCACCGG+AGG + chr1.2:77759343-77759362 MS.gene93877:CDS 60.0%
! ATGACGGGAGGAGGCTTCAG+CGG + chr1.2:77759268-77759287 MS.gene93877:CDS 60.0%
TAGACCAGGGGTGGCCCTGA+GGG - chr1.2:77762494-77762513 None:intergenic 65.0%
TTAGACCAGGGGTGGCCCTG+AGG - chr1.2:77762495-77762514 None:intergenic 65.0%
ACGGGAGGAGGCTTCAGCGG+CGG + chr1.2:77759271-77759290 MS.gene93877:CDS 70.0%
CTGAGGGTGGACGGAAGGGG+CGG - chr1.2:77762478-77762497 None:intergenic 70.0%
GCCCCTTCCGTCCACCCTCA+GGG + chr1.2:77762477-77762496 MS.gene93877:intron 70.0%
GCCCTGAGGGTGGACGGAAG+GGG - chr1.2:77762481-77762500 None:intergenic 70.0%
GGCCCTGAGGGTGGACGGAA+GGG - chr1.2:77762482-77762501 None:intergenic 70.0%
TGGCCCTGAGGGTGGACGGA+AGG - chr1.2:77762483-77762502 None:intergenic 70.0%
ACCAGGGGTGGCCCTGAGGG+TGG - chr1.2:77762491-77762510 None:intergenic 75.0%
ACGGAAGGGGCGGCAGCCCA+GGG - chr1.2:77762468-77762487 None:intergenic 75.0%
CGCCCCTTCCGTCCACCCTC+AGG + chr1.2:77762476-77762495 MS.gene93877:intron 75.0%
GGGGTGGCCCTGAGGGTGGA+CGG - chr1.2:77762487-77762506 None:intergenic 75.0%
TCCACCCTCAGGGCCACCCC+TGG + chr1.2:77762487-77762506 MS.gene93877:intron 75.0%
! GACGGAAGGGGCGGCAGCCC+AGG - chr1.2:77762469-77762488 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 77759268 77764139 77759268 ID=MS.gene93877
chr1.2 mRNA 77759268 77764139 77759268 ID=MS.gene93877.t1;Parent=MS.gene93877
chr1.2 exon 77759268 77759397 77759268 ID=MS.gene93877.t1.exon1;Parent=MS.gene93877.t1
chr1.2 CDS 77759268 77759397 77759268 ID=cds.MS.gene93877.t1;Parent=MS.gene93877.t1
chr1.2 exon 77759669 77759994 77759669 ID=MS.gene93877.t1.exon2;Parent=MS.gene93877.t1
chr1.2 CDS 77759669 77759994 77759669 ID=cds.MS.gene93877.t1;Parent=MS.gene93877.t1
chr1.2 exon 77761919 77762043 77761919 ID=MS.gene93877.t1.exon3;Parent=MS.gene93877.t1
chr1.2 CDS 77761919 77762043 77761919 ID=cds.MS.gene93877.t1;Parent=MS.gene93877.t1
chr1.2 exon 77762844 77763135 77762844 ID=MS.gene93877.t1.exon4;Parent=MS.gene93877.t1
chr1.2 CDS 77762844 77763135 77762844 ID=cds.MS.gene93877.t1;Parent=MS.gene93877.t1
chr1.2 exon 77763441 77764139 77763441 ID=MS.gene93877.t1.exon5;Parent=MS.gene93877.t1
chr1.2 CDS 77763441 77764139 77763441 ID=cds.MS.gene93877.t1;Parent=MS.gene93877.t1
Gene Sequence

>MS.gene93877

ATGACGGGAGGAGGCTTCAGCGGCGGCAACGACAGAGAATTTGAGGCAAAGATAACTCCTATCATTATCATTTCATGCATAATGGCTGCCACCGGAGGTCTTATGTTTGGTTATGATGTTGGAGTTTCAGGTACCTAATGAATGCTAACTTCTTTCATACAATATCTTTGAGCTTAAAATTCGCTTCAAACCTTAATATGTGTTTGGTCGGTCCTTCAAAAATATAATTCTAATTAATTCAAATATCATATTTTATGATAAAATTTAAAATTTATAGTACTATTTTCTTATGGAAAGTGGATTACTCCAATTTCACTAGTGTAAGAGTAGTATAAAAATCTGAGCATTGCTAACAAAACATATCTTATGATGGATGATATGGTTGATTTAATTGTTTTAAGGCGGTGTGGCATCGATGCCACCCTTCTTGAAGAAGTTCTTTCCAACGGTCTTGAGACAGACGACGGAATCAGATGGGTCAGAAAGCAACTACTGCAAATACGATAACCAAGGGTTGCAGCTATTCACTTCATCATTGTATTTGGCGGGTTTAACGGTAACCTTCTTCGCGTCTTATACAACTCGAGTACTAGGAAGAAGGCTCACAATGTTGATCGCTGGCTTCTTCTTCATAGCTGGAGTTACTCTTAATGCATCTGCTCAAAACCTTCTCATGCTCATCGTTGGTAGGGTCTTACTTGGCTGTGGAATTGGATTTGCAAACCAGGTTAGTGTAATTTGATTTTGCTCTCCCTTAGGTTATCTAACCATGTCGCACAAAAAATAAATAAATTATTAGTATTGTATAGTCTACTTGTTTATCCCACTACATAAAATTTATGAATCTACCACTAACACTCCTTCAATTTCAAAATAAATATCGTTTAAGATTTTTACATAATTAAGAAAAATGACTAAGTGTAACAATTTTACATGGATTTTAAATATGTGAAATTTCACATTTTAAATACAATGGATTTTAAATATGCATAATTTCACATATTTTACATGGATTTTTAAAGTTGGATCGAAAAAAAAAAACATGGATTTTTAAAGTATAGTACTATTGCGATGTCTCCATGGATTTTAACGGATGCAATTCAATGTACTATCGTTGTTTGAGTTCGAAACTTGTTTAAGTCATGTGAGATCCTTGTGTACATCATTAGGAGACAAAAATAGGTTTTGTAATTTTTATCAGGTGCTTGTATATTTGTTTGATCAACAGTACTGTTGTGTGTATATACTAGGAGAAATGTTTTTGATGGCACATATTTAAGAATTTAATTAGTATACTTTATTAGTGTAGAAGTCTTTTACACATGCATTCAATGATACGTTATGCGTCAATTAATGACTATAAAAACACGAGTTGTTATATTCATTAATTTATGTGACAACATCATTAATCATAGATTTAATTTAATTATTTTGCAACGAGTACACTCACTTTAGAGATGTCAAATCTTATTTTATAAATGACATTTTTTAACTATTAAATTAATTTTGAGATATTTAAAAAACGAGATGTCAAATCTTATTTTATAAATGACATTTTTTAACTATTAAATTAATTTTGAGATATTTAAAAAACGAACTCTTTTTGTAAAAAATTCGAACAAATTTTTTATTTTCACATTTCGATTATTTTATTAATTAAATTAATATGAATGTATCTATTAATTAAATCAATCATCTCTTTGCTAACTTTTTCATCTAATTGGCTCCCAAAACAAAATTTAACTTATAATTTTACTTTAATTCTATATATGAAAACATTCATAAATCACAGGAGAGATATTTTTCAAGAATTAATAGCAAAATTTGTATTTATTGGACTTATGCTAATAGTAAGGACAAAAATTATAGTCACTTTAGGAAAAACAAAAAGGAACAAAAATTCAAACTCACCTTTTAGTGAACACGTGGTTCTTGTATGAACACATCTTTACAGACACAGCCAATCGTAAGATAAAAGTAATTGTAAGATAACATCAACAAAATTATATCATTTTTTTTATATAGTTATTATATTATATCCTAAACTTTCAATCAATGGTATAGATATAATAATCTAAGGAATTTTATTCAACAAAAAAAAGAAAAAGAATGATGCATAGTGGAAGCCGAACTTTTAAAACCTTTTGGTGGCAACTAACAAATAATATAAAGATTTCCTTGGGACTTTGTAAAAATAAATAAATAAAGGTTTCTTGGCACCCACACAAAGTCTTAATCAGTCTTTCTCAACCCCATATCCACCTTTTTGGCATGAAAGTATTCTTACTATTTGACGTTTATGAGTCATGACACTTGCTGGTGACCACTTTGGGCATGATTTCATTTAATTAAGAGAAAAATGATATAATATGTTTAATTAATGAATGATTAAAATATCTTGTTGACAAGTTCCATTCATTGTTCCCTCAAAAAAAAAAAAAAAAAATTCCATTCATTGTAGCTATCTCTATCTTATTTTAGTCATAACTTTGGACTTTGCCTTTGATTCCTTAAGTAATACTGTATGCTACAAACGATACACGATTTTGGTCATATTCAATTAATCAAATATTTAATTAATAATTTAAAGTTCACACTTTGTGATAACAATTGGCTTTTGGAAGTCACTAATATTGTTTTGATGGAGACAGGCCGTGCCAGTTTTCCTTTCAGAGATTGCACCTTCAAGAATACGTGGAGCATTGAATATTTTGTTTCAGCTTGATATCACTCTTGGCATTCTATTTGCTAACCTTGTCAACTATGCCACCAACAAGTAAGTTCCTTATAATTGTATTGCATCCTTTTGTTTGACATATTAGTTCATTAATTGGAAATTATTGTGTTAAAAACTTGAAAAATTTATAAGAACAATCAATGATAGTAGAAGCTCAATTAATTGATTTTACATTTATTTTGGTTATATAAAAGTCTAACACAGGGTCGGTCCTAAGATTTTTGGTGTCCTGGACAAAACAATAAAATTGTGCCCTTTTAATTTTTTTTTTGGTTACATGTGCCCTTTTAATTATATTTCAATAGTTACTTCTTACATTTTTTGTTGCAAACGATTCATTTATAATCAAAGTTTTCTAAAAATATATTCTCAATATAATTAATTAAACCGAATTAAAATATATATATAGTACTAACTACTAAGTAAAAATAATAATTTTGGTGCCCCTAAAATAATGGTGCCCTGGGCTGCCGCCCCTTCCGTCCACCCTCAGGGCCACCCCTGGTCTAACAACGAAACTCTTGCACACTAAAGGCTAAAAATTCGAGAATTGTGGGTTTGAGCTCGCATCCGAGCATATAAAATGTATGCGTAGCTCTTTACGTATTTATGAGACATTTTATTTTATATTTTTATAGGTGAAAGCACCAAAATTATAACACATATGCTTGACTATTTAGTGTTTTGTGAGCCAAAGAAATTCTTAATATAGAATTTAATGATAATGCTACATATTTGACTTTAATGAAAAGTCATGCCAATTTACTCTAGACAAATAGTTATGAATATTGTACAATTCATGTTACTGATGCTGCTTATTATATATCTTTGCATAACAGAATCAAAGGTCATTGGGGTTGGAGGATATCTCTGGGATTGGGAGGTATCCCAGCATTACTCCTCACTTTAGGGGCTTACTTGGTAGTGGACACCCCAAATAGTCTCATTGAACGAGGTCACTTGGACAAAGGAAAAGCTGTTCTGAGAAAGATTCGTGGCACGGACAACATTGAACCCGAGTTCTTAGAGTTAGTAGAGGCAAGTCGTGTTGCTAAAGAGGTGAAACATCCGTTCAGAAATCTCCTCAAGCGCAATAACCGACCTCAACTTGTCATTTCCATTGCCCTAATGGTTTGTAATAATCTTATGTTCACATTTTCCTAAGCATAGATAATATGATAGCCAAGGTTTTAATTCATGGTTGCAATCGCTTAACAATTCTTGTTTTTGTAGAGAATTGTAGTCAAATACGTTTAAAAGTTAAAACCGCCCTAATTGCAATAGCGAAAATAAAAAAACTAAGATGTCGTGGCCACAATTGCAATTGCAGACCCTTTTTATAACCTTTTATTGATAGCTGAATTATATAAGCTTATTATAAAGTTATAGTCATTGCTCCTTTTCATTAATGTTGCTCAAATATGGTGATAAAACAGATATTTCAGCAATTCACTGGCATCAATGCCATAATGTTCTATGCTCCAGTTCTGTTCAACACATTGGGATTCAAGAATGATGCTGCACTTTACTCTGCTGTGATTACTGGTGCTATCAATGTCGTCTCAACGATAGTCTCAATATATTCGGTTGATAAACTGGGACGTCGAAAGCTATTACTCGAAGCTGGTGTTCAAATGTTCTTGTCACAAATGGTGATAGCAATTGTACTAGGAATCAAAGTGAAGGACCATTCTGAGGAACTCTCGAAAGGGTATGCAGCTCTTGTAGTTGTGATGGTGTGTATTTTTGTGTCAGCATTTGCATGGTCATGGGGTCCACTTGCTTGGCTTATTCCAAGTGAGATATTTCCACTAGAGACTCGTTCTGCAGGGCAAAGTGTAACAGTTTGTGTCAACTTCCTCTTCACTGCTGTCATTGCACAAGCTTTCCTTTCAATGCTTTGTTATTTCAAGTTTGGTATCTTCTTTTTCTTCTCTGGTTGGATCTTGTTCATGTCAACTTTTGTCTTTTTCCTTGTCCCTGAGACAAAGAATGTCCCTATTGAAGAGATGACACAAAAAGTGTGGAAGCAGCATTGGTTTTGGAAGAGGTTTGTTGAAAATGATTATATTGAAGATGAGAAAGTACCTGGTGGAAATTCCCCTAGCAGAAATGATCTTGTCTCTCGGTTGTAA
Protein sequence

>MS.gene93877.t1

MTGGGFSGGNDREFEAKITPIIIISCIMAATGGLMFGYDVGVSGGVASMPPFLKKFFPTVLRQTTESDGSESNYCKYDNQGLQLFTSSLYLAGLTVTFFASYTTRVLGRRLTMLIAGFFFIAGVTLNASAQNLLMLIVGRVLLGCGIGFANQAVPVFLSEIAPSRIRGALNILFQLDITLGILFANLVNYATNKIKGHWGWRISLGLGGIPALLLTLGAYLVVDTPNSLIERGHLDKGKAVLRKIRGTDNIEPEFLELVEASRVAKEVKHPFRNLLKRNNRPQLVISIALMIFQQFTGINAIMFYAPVLFNTLGFKNDAALYSAVITGAINVVSTIVSIYSVDKLGRRKLLLEAGVQMFLSQMVIAIVLGIKVKDHSEELSKGYAALVVVMVCIFVSAFAWSWGPLAWLIPSEIFPLETRSAGQSVTVCVNFLFTAVIAQAFLSMLCYFKFGIFFFFSGWILFMSTFVFFLVPETKNVPIEEMTQKVWKQHWFWKRFVENDYIEDEKVPGGNSPSRNDLVSRL