Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93946.t1 | XP_003605677.3 | 96.7 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 5.90E-179 | 636.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93946.t1 | Q9SV68 | 73.6 | 330 | 86 | 1 | 1 | 330 | 1 | 329 | 2.5e-138 | 493.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93946.t1 | A0A396I9R6 | 96.7 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 4.2e-179 | 636.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049424 | MS.gene93946 | 0.825908 | 3.63E-54 | -1.69E-46 |
| MS.gene050987 | MS.gene93946 | 0.845378 | 4.22E-59 | -1.69E-46 |
| MS.gene053188 | MS.gene93946 | 0.828045 | 1.12E-54 | -1.69E-46 |
| MS.gene054537 | MS.gene93946 | 0.827584 | 1.44E-54 | -1.69E-46 |
| MS.gene057392 | MS.gene93946 | 0.827529 | 1.49E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93946.t1 | MTR_4g036310 | 82.067 | 329 | 58 | 1 | 1 | 329 | 1 | 328 | 0.0 | 553 |
| MS.gene93946.t1 | MTR_4g033205 | 80.303 | 330 | 64 | 1 | 1 | 330 | 1 | 329 | 0.0 | 539 |
| MS.gene93946.t1 | MTR_4g032995 | 80.303 | 330 | 64 | 1 | 1 | 330 | 1 | 329 | 0.0 | 538 |
| MS.gene93946.t1 | MTR_4g036260 | 96.679 | 271 | 9 | 0 | 60 | 330 | 38 | 308 | 0.0 | 534 |
| MS.gene93946.t1 | MTR_4g036170 | 73.860 | 329 | 60 | 4 | 1 | 329 | 1 | 303 | 7.47e-168 | 469 |
| MS.gene93946.t1 | MTR_7g055743 | 67.314 | 309 | 100 | 1 | 21 | 329 | 61 | 368 | 2.06e-149 | 425 |
| MS.gene93946.t1 | MTR_8g064610 | 35.673 | 342 | 168 | 11 | 6 | 330 | 76 | 382 | 5.92e-43 | 152 |
| MS.gene93946.t1 | MTR_4g036150 | 80.282 | 71 | 14 | 0 | 1 | 71 | 1 | 71 | 2.22e-38 | 131 |
| MS.gene93946.t1 | MTR_8g035630 | 32.738 | 336 | 185 | 10 | 4 | 328 | 2 | 307 | 9.82e-34 | 127 |
| MS.gene93946.t1 | MTR_8g035880 | 32.738 | 336 | 185 | 10 | 4 | 328 | 2 | 307 | 2.33e-33 | 126 |
| MS.gene93946.t1 | MTR_6g012170 | 33.134 | 335 | 185 | 8 | 7 | 330 | 12 | 318 | 1.12e-32 | 124 |
| MS.gene93946.t1 | MTR_7g034395 | 34.203 | 345 | 182 | 13 | 1 | 330 | 1 | 315 | 6.40e-31 | 119 |
| MS.gene93946.t1 | MTR_2g078520 | 28.863 | 343 | 214 | 8 | 7 | 329 | 27 | 359 | 2.52e-27 | 110 |
| MS.gene93946.t1 | MTR_6g012160 | 31.613 | 310 | 175 | 7 | 7 | 307 | 12 | 293 | 9.75e-26 | 105 |
| MS.gene93946.t1 | MTR_4g050760 | 27.439 | 328 | 209 | 10 | 16 | 328 | 10 | 323 | 6.75e-21 | 92.0 |
| MS.gene93946.t1 | MTR_2g012380 | 27.439 | 328 | 209 | 10 | 16 | 328 | 10 | 323 | 6.75e-21 | 92.0 |
| MS.gene93946.t1 | MTR_2g012420 | 27.245 | 323 | 206 | 10 | 21 | 328 | 15 | 323 | 3.84e-19 | 87.0 |
| MS.gene93946.t1 | MTR_2g012380 | 30.876 | 217 | 136 | 6 | 16 | 229 | 10 | 215 | 1.18e-18 | 84.7 |
| MS.gene93946.t1 | MTR_4g086400 | 30.793 | 328 | 191 | 13 | 24 | 328 | 166 | 480 | 7.28e-17 | 81.6 |
| MS.gene93946.t1 | MTR_4g086410 | 30.699 | 329 | 190 | 13 | 24 | 328 | 306 | 620 | 1.04e-16 | 81.3 |
| MS.gene93946.t1 | MTR_4g086400 | 30.793 | 328 | 191 | 13 | 24 | 328 | 306 | 620 | 1.74e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93946.t1 | AT4G13010 | 73.636 | 330 | 86 | 1 | 1 | 330 | 1 | 329 | 3.76e-175 | 488 |
| MS.gene93946.t1 | AT1G23740 | 35.294 | 340 | 176 | 11 | 4 | 330 | 76 | 384 | 2.24e-41 | 148 |
| MS.gene93946.t1 | AT3G15090 | 30.650 | 323 | 196 | 6 | 26 | 329 | 52 | 365 | 5.49e-29 | 115 |
| MS.gene93946.t1 | AT1G49670 | 31.737 | 334 | 186 | 16 | 19 | 328 | 301 | 616 | 4.50e-18 | 85.5 |
| MS.gene93946.t1 | AT1G49670 | 30.398 | 352 | 190 | 17 | 19 | 328 | 301 | 639 | 3.03e-15 | 77.0 |
| MS.gene93946.t1 | AT4G21580 | 27.329 | 322 | 209 | 13 | 21 | 329 | 15 | 324 | 6.34e-15 | 74.7 |
| MS.gene93946.t1 | AT4G21580 | 27.414 | 321 | 204 | 13 | 21 | 329 | 15 | 318 | 1.90e-14 | 73.6 |
| MS.gene93946.t1 | AT4G21580 | 26.667 | 270 | 176 | 10 | 73 | 329 | 31 | 291 | 2.50e-12 | 67.0 |
| MS.gene93946.t1 | AT5G61510 | 25.767 | 326 | 219 | 8 | 16 | 330 | 93 | 406 | 4.07e-12 | 67.0 |
Find 77 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGACGCCCTCACAGAAAT+TGG | 0.273115 | 4.3:+66354569 | MS.gene93946:CDS |
| AGTAAAACTTCATTGGTCTT+TGG | 0.287529 | 4.3:-66350632 | None:intergenic |
| GACTGAATCTTCCAATCAAC+TGG | 0.313131 | 4.3:-66350680 | None:intergenic |
| AGATTCAGTCTGGTGCTCTA+AGG | 0.338199 | 4.3:+66350693 | MS.gene93946:CDS |
| TCCTATGGCGGAGGAGTCTC+TGG | 0.355413 | 4.3:+66350468 | MS.gene93946:CDS |
| CAATTTGAGTAAAACTTCAT+TGG | 0.361551 | 4.3:-66350639 | None:intergenic |
| AACTGTTAAGCGTGAGGGCT+TGG | 0.380438 | 4.3:+66354985 | MS.gene93946:CDS |
| TGATCCTAATTTGAGTGAAA+AGG | 0.380673 | 4.3:+66354865 | MS.gene93946:CDS |
| GATCCTAATTTGAGTGAAAA+GGG | 0.382966 | 4.3:+66354866 | MS.gene93946:CDS |
| CCTTCAGCAGCTGAGACTTC+AGG | 0.386418 | 4.3:-66354515 | None:intergenic |
| TGGCGAGCAGAAGAATGTTT+TGG | 0.398444 | 4.3:+66354613 | MS.gene93946:CDS |
| ATTGGAGGAATTAAGCTTGA+TGG | 0.403108 | 4.3:+66354587 | MS.gene93946:CDS |
| AGCTGAGACTTCAGGTGGTC+TGG | 0.404146 | 4.3:-66354507 | None:intergenic |
| GCTGTTCAACTTGCAAAACT+AGG | 0.406268 | 4.3:+66354668 | MS.gene93946:CDS |
| AGTATTGATGGCCATGCTAC+TGG | 0.420478 | 4.3:+66355100 | MS.gene93946:CDS |
| AGAGATTGGACCACAAGTTA+AGG | 0.426820 | 4.3:+66351795 | MS.gene93946:CDS |
| TGAGCAAAGCTGAAGATGCT+TGG | 0.430166 | 4.3:+66355071 | MS.gene93946:CDS |
| GGTGCGAGTTTACCTATTGC+CGG | 0.430821 | 4.3:+66354536 | MS.gene93946:CDS |
| TTGGTCTTTGGAGTTGGTAC+AGG | 0.448329 | 4.3:-66350620 | None:intergenic |
| GAGCAAAGCTGAAGATGCTT+GGG | 0.448420 | 4.3:+66355072 | MS.gene93946:CDS |
| CGGAGGAGTCTCTGGATTGA+AGG | 0.450051 | 4.3:+66350476 | MS.gene93946:CDS |
| GCAAAAGTCAACAATGAACT+TGG | 0.454364 | 4.3:-66354914 | None:intergenic |
| GCTTGGGCTAAGAGTATTGA+TGG | 0.455624 | 4.3:+66355088 | MS.gene93946:CDS |
| CTAGCATCAACCCAGTTGAT+TGG | 0.458227 | 4.3:+66350669 | MS.gene93946:CDS |
| CGAGCTGTGAGACCGGCAAT+AGG | 0.465576 | 4.3:-66354548 | None:intergenic |
| GCAGGAGAGGTAGTAGAGAT+TGG | 0.465867 | 4.3:+66351781 | MS.gene93946:CDS |
| GGAATTAAGCTTGATGGGAC+TGG | 0.474637 | 4.3:+66354593 | MS.gene93946:CDS |
| GCATCTTCAGCTTTGCTCAA+AGG | 0.476004 | 4.3:-66355067 | None:intergenic |
| ACTTCATTGGTCTTTGGAGT+TGG | 0.486575 | 4.3:-66350626 | None:intergenic |
| GTCAACAATGAACTTGGGCC+AGG | 0.489320 | 4.3:-66354908 | None:intergenic |
| TTGGAGGAATTAAGCTTGAT+GGG | 0.490626 | 4.3:+66354588 | MS.gene93946:CDS |
| ACTGCTGCTTCAGGTGGTGT+AGG | 0.492958 | 4.3:+66354638 | MS.gene93946:CDS |
| GGCGTCACGAGCTGTGAGAC+CGG | 0.493743 | 4.3:-66354555 | None:intergenic |
| CTCTTCAGTGATGTTCCCGC+TGG | 0.494371 | 4.3:-66354779 | None:intergenic |
| CTGTTCAACTTGCAAAACTA+GGG | 0.495267 | 4.3:+66354669 | MS.gene93946:CDS |
| GTTGTCGTGGATTTAACACC+TGG | 0.495781 | 4.3:+66354890 | MS.gene93946:CDS |
| GCAGTAATACATTGCACCAC+TGG | 0.498635 | 4.3:+66354824 | MS.gene93946:CDS |
| ACATCACTGAAGAGTCCATC+TGG | 0.503456 | 4.3:+66354788 | MS.gene93946:CDS |
| CGCTTAACAGTTACAACGAA+TGG | 0.512764 | 4.3:-66354974 | None:intergenic |
| GCTCTTCAGTACAGTTCCTA+TGG | 0.513825 | 4.3:+66350453 | MS.gene93946:CDS |
| ATCGACTTCGTTAAGAGCTT+AGG | 0.516851 | 4.3:+66354728 | MS.gene93946:CDS |
| GATTCAGGCACTGATGTAGC+AGG | 0.527374 | 4.3:+66351763 | MS.gene93946:intron |
| AATTCCTCCAATTTCTGTGA+GGG | 0.528728 | 4.3:-66354576 | None:intergenic |
| GTTGATTGGAAGATTCAGTC+TGG | 0.533264 | 4.3:+66350683 | MS.gene93946:CDS |
| GCTTTAAAATCCTTAACTTG+TGG | 0.540127 | 4.3:-66351805 | None:intergenic |
| GATTCAGTCTGGTGCTCTAA+GGG | 0.542295 | 4.3:+66350694 | MS.gene93946:CDS |
| TTGGTAACTGCTGCTTCAGG+TGG | 0.558002 | 4.3:+66354632 | MS.gene93946:CDS |
| CTCGCTCAACTAGTGAAGGA+TGG | 0.564162 | 4.3:+66355013 | MS.gene93946:CDS |
| GTTGTAACTGTTAAGCGTGA+GGG | 0.570258 | 4.3:+66354980 | MS.gene93946:CDS |
| TCCAGAGACTCCTCCGCCAT+AGG | 0.573666 | 4.3:-66350469 | None:intergenic |
| CAGTACAGTTCCTATGGCGG+AGG | 0.575427 | 4.3:+66350459 | MS.gene93946:CDS |
| CCTGAAGTCTCAGCTGCTGA+AGG | 0.576984 | 4.3:+66354515 | MS.gene93946:CDS |
| CGTTGTAACTGTTAAGCGTG+AGG | 0.578759 | 4.3:+66354979 | MS.gene93946:CDS |
| CTTGACTACAAAACTCCAGC+GGG | 0.579903 | 4.3:+66354764 | MS.gene93946:CDS |
| TCCTAATTTGAGTGAAAAGG+GGG | 0.582411 | 4.3:+66354868 | MS.gene93946:CDS |
| TAAGAGCTTAGGCGCTGACG+AGG | 0.584824 | 4.3:+66354739 | MS.gene93946:CDS |
| ACATCTCGCTCAACTAGTGA+AGG | 0.592170 | 4.3:+66355009 | MS.gene93946:CDS |
| AGGCACTGATGTAGCAGGAG+AGG | 0.593122 | 4.3:+66351768 | MS.gene93946:intron |
| TGTGAATGACAGTATGGAGG+TGG | 0.601090 | 4.3:+66354443 | MS.gene93946:intron |
| ATCCTAATTTGAGTGAAAAG+GGG | 0.606192 | 4.3:+66354867 | MS.gene93946:CDS |
| CAAAAGTCAACAATGAACTT+GGG | 0.607885 | 4.3:-66354913 | None:intergenic |
| GACGCCCTCACAGAAATTGG+AGG | 0.616536 | 4.3:+66354572 | MS.gene93946:CDS |
| CACCACAAGTGGCTGTCACG+TGG | 0.628418 | 4.3:-66354697 | None:intergenic |
| GATGTTGCGAGCACCACAAG+TGG | 0.635466 | 4.3:-66354708 | None:intergenic |
| TGTGTTATACAAGGTATGTG+AGG | 0.642683 | 4.3:-66350740 | None:intergenic |
| TGTTAAGCTCTCGCTAGCCA+CGG | 0.646494 | 4.3:-66354480 | None:intergenic |
| TGGACTAGCTGAGTTTGCCG+TGG | 0.647341 | 4.3:+66354463 | MS.gene93946:CDS |
| AACCACGTGACAGCCACTTG+TGG | 0.652023 | 4.3:+66354695 | MS.gene93946:CDS |
| TAATTCCTCCAATTTCTGTG+AGG | 0.652507 | 4.3:-66354577 | None:intergenic |
| TCAGCAGCTGAGACTTCAGG+TGG | 0.657763 | 4.3:-66354512 | None:intergenic |
| CTTCAGTACAGTTCCTATGG+CGG | 0.668012 | 4.3:+66350456 | MS.gene93946:CDS |
| TTATGTGAATGACAGTATGG+AGG | 0.672015 | 4.3:+66354440 | MS.gene93946:intron |
| ACTGAATCTTCCAATCAACT+GGG | 0.677961 | 4.3:-66350679 | None:intergenic |
| TTAGGATCAAAAGTTGACCA+TGG | 0.679639 | 4.3:-66354851 | None:intergenic |
| AGTTGACCATGGTATTCCAG+TGG | 0.688020 | 4.3:-66354840 | None:intergenic |
| TCTTGACTACAAAACTCCAG+CGG | 0.700353 | 4.3:+66354763 | MS.gene93946:CDS |
| ATTGCACCACTGGAATACCA+TGG | 0.709876 | 4.3:+66354834 | MS.gene93946:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAAGAAAAAAAAATAT+AGG | - | chr4.3:66351597-66351616 | None:intergenic | 10.0% |
| !! | ATGAAATAAAAAAAAAAAGT+TGG | - | chr4.3:66354370-66354389 | None:intergenic | 10.0% |
| !! | ATAAAAAAAAAAAGTTGGAT+TGG | - | chr4.3:66354365-66354384 | None:intergenic | 15.0% |
| !! | ATAGAAATTGAAATATTGTT+TGG | - | chr4.3:66353160-66353179 | None:intergenic | 15.0% |
| !! | CATTTATATATTAATTACAC+TGG | + | chr4.3:66354393-66354412 | MS.gene93946:intron | 15.0% |
| !!! | AATTATAAATATAGGTTGAA+AGG | - | chr4.3:66352702-66352721 | None:intergenic | 15.0% |
| !!! | ATTATAAATATAGGTTGAAA+GGG | - | chr4.3:66352701-66352720 | None:intergenic | 15.0% |
| !! | ATCTGATTCAATTCAATTAT+TGG | + | chr4.3:66350574-66350593 | MS.gene93946:intron | 20.0% |
| !! | ATTACTGTGTAATTAATAGA+AGG | - | chr4.3:66354076-66354095 | None:intergenic | 20.0% |
| !! | ATTTCTACAAGTCAAATTAT+AGG | - | chr4.3:66350795-66350814 | None:intergenic | 20.0% |
| !! | CTAGAAAACTGAAATATTAT+TGG | + | chr4.3:66350973-66350992 | MS.gene93946:intron | 20.0% |
| !! | GTAGTCTGAATTATAAATAT+AGG | - | chr4.3:66352710-66352729 | None:intergenic | 20.0% |
| !! | TGATGTATTTGGTTAAAAAT+GGG | - | chr4.3:66352910-66352929 | None:intergenic | 20.0% |
| !! | TTGATGTATTTGGTTAAAAA+TGG | - | chr4.3:66352911-66352930 | None:intergenic | 20.0% |
| !! | TTGCAATATCAATAAAATGA+GGG | - | chr4.3:66352079-66352098 | None:intergenic | 20.0% |
| !! | TTTAAAAACTCGTTTATTTC+TGG | - | chr4.3:66353475-66353494 | None:intergenic | 20.0% |
| !! | TTTCATATCTCCATAATTTA+GGG | - | chr4.3:66353427-66353446 | None:intergenic | 20.0% |
| !! | TTTGCAATATCAATAAAATG+AGG | - | chr4.3:66352080-66352099 | None:intergenic | 20.0% |
| !!! | ATCAATATTTTGATATGTGA+TGG | - | chr4.3:66352108-66352127 | None:intergenic | 20.0% |
| !!! | GAATTTTAAACTCAAACAAA+TGG | - | chr4.3:66352593-66352612 | None:intergenic | 20.0% |
| !!! | TATAGATAGATTACTACTTT+TGG | + | chr4.3:66353731-66353750 | MS.gene93946:intron | 20.0% |
| !!! | TTTTAAGAATTAGATGGAAA+AGG | + | chr4.3:66353903-66353922 | MS.gene93946:intron | 20.0% |
| !!! | TTTTCATATCTCCATAATTT+AGG | - | chr4.3:66353428-66353447 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTATAGATAGGAA+CGG | + | chr4.3:66352945-66352964 | MS.gene93946:intron | 20.0% |
| ! | AAATTGAAATGCAATCATCT+TGG | + | chr4.3:66353118-66353137 | MS.gene93946:intron | 25.0% |
| ! | AACCCAAATAAATTCTTCTT+TGG | + | chr4.3:66353071-66353090 | MS.gene93946:intron | 25.0% |
| ! | AAGATGATTGCATTTCAATT+TGG | - | chr4.3:66353119-66353138 | None:intergenic | 25.0% |
| ! | AATAAAGTTTACTACCATGA+TGG | + | chr4.3:66352437-66352456 | MS.gene93946:intron | 25.0% |
| ! | AATAACCTTCTCTTTAGTAA+AGG | + | chr4.3:66354151-66354170 | MS.gene93946:intron | 25.0% |
| ! | AATCAACAGTATAAATCATG+TGG | - | chr4.3:66354229-66354248 | None:intergenic | 25.0% |
| ! | AATTAAGATTCCTTTGATCT+TGG | + | chr4.3:66351734-66351753 | MS.gene93946:intron | 25.0% |
| ! | ACCCAAAGAAGAATTTATTT+GGG | - | chr4.3:66353076-66353095 | None:intergenic | 25.0% |
| ! | ACCCAAATAAATTCTTCTTT+GGG | + | chr4.3:66353072-66353091 | MS.gene93946:intron | 25.0% |
| ! | ACTAAAAATAACTCAGAGAT+AGG | - | chr4.3:66351088-66351107 | None:intergenic | 25.0% |
| ! | ACTTGAATTAACACAGATAA+TGG | - | chr4.3:66351905-66351924 | None:intergenic | 25.0% |
| ! | AGAAAAAGTAAAAAAGAAGG+TGG | - | chr4.3:66350771-66350790 | None:intergenic | 25.0% |
| ! | ATCACTAGAAATAGAATCTA+GGG | + | chr4.3:66353025-66353044 | MS.gene93946:intron | 25.0% |
| ! | ATTAAGATTCCTTTGATCTT+GGG | + | chr4.3:66351735-66351754 | MS.gene93946:intron | 25.0% |
| ! | CAATTTGAGTAAAACTTCAT+TGG | - | chr4.3:66350642-66350661 | None:intergenic | 25.0% |
| ! | CACTTAACACATGAAATTAA+CGG | + | chr4.3:66353611-66353630 | MS.gene93946:intron | 25.0% |
| ! | CACTTATCAACAAATCTAAA+AGG | + | chr4.3:66353243-66353262 | MS.gene93946:intron | 25.0% |
| ! | CTAAAAATAACTCAGAGATA+GGG | - | chr4.3:66351087-66351106 | None:intergenic | 25.0% |
| ! | GAAATATTATTGGATGTTTC+TGG | + | chr4.3:66350983-66351002 | MS.gene93946:intron | 25.0% |
| ! | GATTTACTTTCTTTACATAC+TGG | - | chr4.3:66352318-66352337 | None:intergenic | 25.0% |
| ! | GGAGATATGAAAATTTCTTA+AGG | + | chr4.3:66353435-66353454 | MS.gene93946:intron | 25.0% |
| ! | TAAAAATAACTCAGAGATAG+GGG | - | chr4.3:66351086-66351105 | None:intergenic | 25.0% |
| ! | TAAATCACTAATCTATAGCT+TGG | + | chr4.3:66352332-66352351 | MS.gene93946:intron | 25.0% |
| ! | TAATCAAATCATACCTTTCT+AGG | - | chr4.3:66353964-66353983 | None:intergenic | 25.0% |
| ! | TATCACTAGAAATAGAATCT+AGG | + | chr4.3:66353024-66353043 | MS.gene93946:intron | 25.0% |
| ! | TGTGTAATTAATAGAAGGTA+AGG | - | chr4.3:66354071-66354090 | None:intergenic | 25.0% |
| ! | TTATCTATAAGTACCCAATT+TGG | - | chr4.3:66353704-66353723 | None:intergenic | 25.0% |
| !! | AAAGGATAAGCAGATTTTAA+AGG | + | chr4.3:66353261-66353280 | MS.gene93946:intron | 25.0% |
| !! | CAATGAAGTTTTACTCAAAT+TGG | + | chr4.3:66350640-66350659 | MS.gene93946:CDS | 25.0% |
| !! | CATGCAATTTTATTACAAAC+CGG | + | chr4.3:66352414-66352433 | MS.gene93946:intron | 25.0% |
| !! | TGTTTCTCCAACAAATTTTT+GGG | + | chr4.3:66353219-66353238 | MS.gene93946:intron | 25.0% |
| !! | TTGTTGATTGATTTACCAAT+TGG | - | chr4.3:66353757-66353776 | None:intergenic | 25.0% |
| !! | TTTAAAATTCCTTTAGCAAG+AGG | + | chr4.3:66352603-66352622 | MS.gene93946:intron | 25.0% |
| !!! | ACTCGTTTTTTCTTATAGAT+AGG | + | chr4.3:66352940-66352959 | MS.gene93946:intron | 25.0% |
| !!! | CTTTTAGATTTGTTGATAAG+TGG | - | chr4.3:66353245-66353264 | None:intergenic | 25.0% |
| !!! | GACAATATTTTGATAAGTCA+GGG | + | chr4.3:66353646-66353665 | MS.gene93946:intron | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATT+TGG | - | chr4.3:66352921-66352940 | None:intergenic | 25.0% |
| !!! | TCAAGGTTTTAAGAATTAGA+TGG | + | chr4.3:66353897-66353916 | MS.gene93946:intron | 25.0% |
| !!! | TGACAATATTTTGATAAGTC+AGG | + | chr4.3:66353645-66353664 | MS.gene93946:intron | 25.0% |
| !!! | TTTTGAAAGAGATGAGAAAT+GGG | - | chr4.3:66350518-66350537 | None:intergenic | 25.0% |
| !!! | TTTTTCAAAACCGAATTGAT+CGG | + | chr4.3:66351049-66351068 | MS.gene93946:intron | 25.0% |
| AAATGATAAACTCAAAACCG+TGG | + | chr4.3:66352523-66352542 | MS.gene93946:intron | 30.0% | |
| AATGGTAATACCATGGTAAA+TGG | - | chr4.3:66352575-66352594 | None:intergenic | 30.0% | |
| AGACAACTGGAAATAGATAT+TGG | - | chr4.3:66352272-66352291 | None:intergenic | 30.0% | |
| ATACACCTTTACTAAAGAGA+AGG | - | chr4.3:66354159-66354178 | None:intergenic | 30.0% | |
| ATCCTAATTTGAGTGAAAAG+GGG | + | chr4.3:66354867-66354886 | MS.gene93946:CDS | 30.0% | |
| ATGTCATAAGCTATTCCTTT+AGG | - | chr4.3:66351463-66351482 | None:intergenic | 30.0% | |
| ATGTTAGACAGACAACAAAT+TGG | - | chr4.3:66353828-66353847 | None:intergenic | 30.0% | |
| CAAAAGTCAACAATGAACTT+GGG | - | chr4.3:66354916-66354935 | None:intergenic | 30.0% | |
| CAAATACTGTAATACTACGA+TGG | - | chr4.3:66352381-66352400 | None:intergenic | 30.0% | |
| CATGGTAGTAAACTTTATTC+CGG | - | chr4.3:66352436-66352455 | None:intergenic | 30.0% | |
| CGTTAATTTCATGTGTTAAG+TGG | - | chr4.3:66353613-66353632 | None:intergenic | 30.0% | |
| CTAAAGTAGTACATCCAAAT+TGG | - | chr4.3:66350900-66350919 | None:intergenic | 30.0% | |
| GACCCAAAGAAGAATTTATT+TGG | - | chr4.3:66353077-66353096 | None:intergenic | 30.0% | |
| GATCCTAATTTGAGTGAAAA+GGG | + | chr4.3:66354866-66354885 | MS.gene93946:CDS | 30.0% | |
| GATTAAATCGATAAAACGCT+AGG | + | chr4.3:66352229-66352248 | MS.gene93946:intron | 30.0% | |
| GCTTATGACATATCTAAGAA+TGG | + | chr4.3:66351472-66351491 | MS.gene93946:intron | 30.0% | |
| GGCAGAAAAAGTAAAAAAGA+AGG | - | chr4.3:66350774-66350793 | None:intergenic | 30.0% | |
| GTGATACTAAGTTTCTGTTT+GGG | + | chr4.3:66351234-66351253 | MS.gene93946:intron | 30.0% | |
| TAACACATGAAATTAACGGA+GGG | + | chr4.3:66353615-66353634 | MS.gene93946:intron | 30.0% | |
| TAATAACACATACCCTTTCA+CGG | + | chr4.3:66351984-66352003 | MS.gene93946:intron | 30.0% | |
| TAATGGAAAACAGTAACCTA+AGG | - | chr4.3:66351888-66351907 | None:intergenic | 30.0% | |
| TACTTTAATCCTCTTGCTAA+AGG | - | chr4.3:66352615-66352634 | None:intergenic | 30.0% | |
| TAGTACACATAAGCAAAAGT+CGG | + | chr4.3:66352205-66352224 | MS.gene93946:intron | 30.0% | |
| TAGTACTCGTAAGAAAAAGT+CGG | - | chr4.3:66353529-66353548 | None:intergenic | 30.0% | |
| TATTGCAAGTAAAAGTGAGT+AGG | - | chr4.3:66351713-66351732 | None:intergenic | 30.0% | |
| TCAAACAAATGGTAATACCA+TGG | - | chr4.3:66352582-66352601 | None:intergenic | 30.0% | |
| TGATCCTAATTTGAGTGAAA+AGG | + | chr4.3:66354865-66354884 | MS.gene93946:CDS | 30.0% | |
| TGGTAAATCAATCAACAACA+TGG | + | chr4.3:66353759-66353778 | MS.gene93946:intron | 30.0% | |
| TGTCATAAGCTATTCCTTTA+GGG | - | chr4.3:66351462-66351481 | None:intergenic | 30.0% | |
| TGTGATACTAAGTTTCTGTT+TGG | + | chr4.3:66351233-66351252 | MS.gene93946:intron | 30.0% | |
| TTAACACATGAAATTAACGG+AGG | + | chr4.3:66353614-66353633 | MS.gene93946:intron | 30.0% | |
| TTCAACAGGTATAATAACCA+CGG | - | chr4.3:66352543-66352562 | None:intergenic | 30.0% | |
| TTTGGATGTAGTGTTTATGA+GGG | - | chr4.3:66351435-66351454 | None:intergenic | 30.0% | |
| ! | AAAAAAGTTGGATTGGAGAT+AGG | - | chr4.3:66354358-66354377 | None:intergenic | 30.0% |
| ! | ATATAGGTTGAAAGGGAAAA+AGG | - | chr4.3:66352694-66352713 | None:intergenic | 30.0% |
| ! | GTGTTTCTCCAACAAATTTT+TGG | + | chr4.3:66353218-66353237 | MS.gene93946:intron | 30.0% |
| ! | TGTACTACTTTAGTTTCTTC+AGG | + | chr4.3:66350907-66350926 | MS.gene93946:intron | 30.0% |
| !! | AAAATTTGTTGGAGAAACAC+AGG | - | chr4.3:66353218-66353237 | None:intergenic | 30.0% |
| !! | AATTCTAGCTTGTACCAATT+TGG | + | chr4.3:66353500-66353519 | MS.gene93946:intron | 30.0% |
| !! | AGTAAAACTTCATTGGTCTT+TGG | - | chr4.3:66350635-66350654 | None:intergenic | 30.0% |
| !! | CTTTTGAAAGAGATGAGAAA+TGG | - | chr4.3:66350519-66350538 | None:intergenic | 30.0% |
| !! | GCTTTAAAATCCTTAACTTG+TGG | - | chr4.3:66351808-66351827 | None:intergenic | 30.0% |
| !! | GTGCTTAAGCTTTAAAATCT+AGG | - | chr4.3:66353194-66353213 | None:intergenic | 30.0% |
| !! | TGTCACTTTAAGTGATATTC+TGG | + | chr4.3:66352171-66352190 | MS.gene93946:intron | 30.0% |
| !!! | CAAGTTAAGGATTTTAAAGC+TGG | + | chr4.3:66351808-66351827 | MS.gene93946:CDS | 30.0% |
| !!! | GCATCATATTTTTTACCAGA+TGG | - | chr4.3:66354806-66354825 | None:intergenic | 30.0% |
| !!! | TACTTTTTCAAAGAAGCGAT+TGG | + | chr4.3:66354949-66354968 | MS.gene93946:CDS | 30.0% |
| AAAAGACAAAGACTTGACTC+AGG | + | chr4.3:66353332-66353351 | MS.gene93946:intron | 35.0% | |
| AATCAATCAACAACATGGAG+TGG | + | chr4.3:66353764-66353783 | MS.gene93946:intron | 35.0% | |
| AATTATTAGTCACAGCTCAC+AGG | - | chr4.3:66352470-66352489 | None:intergenic | 35.0% | |
| AATTCCTCCAATTTCTGTGA+GGG | - | chr4.3:66354579-66354598 | None:intergenic | 35.0% | |
| ACAAACTACATCTCCTAACA+AGG | - | chr4.3:66353996-66354015 | None:intergenic | 35.0% | |
| ACTGAATCTTCCAATCAACT+GGG | - | chr4.3:66350682-66350701 | None:intergenic | 35.0% | |
| AGACAACAAATTGGAATGGT+TGG | - | chr4.3:66353819-66353838 | None:intergenic | 35.0% | |
| AGACAGACAACAAATTGGAA+TGG | - | chr4.3:66353823-66353842 | None:intergenic | 35.0% | |
| AGTACACATAAGCAAAAGTC+GGG | + | chr4.3:66352206-66352225 | MS.gene93946:intron | 35.0% | |
| AGTACTCGTAAGAAAAAGTC+GGG | - | chr4.3:66353528-66353547 | None:intergenic | 35.0% | |
| AGTGATATTTCCGTTCTGTT+AGG | - | chr4.3:66353011-66353030 | None:intergenic | 35.0% | |
| ATACTAAGTTTCTGTTTGGG+AGG | + | chr4.3:66351237-66351256 | MS.gene93946:intron | 35.0% | |
| ATACTACGATGGTACATTTC+TGG | - | chr4.3:66352370-66352389 | None:intergenic | 35.0% | |
| ATCATACCTTTCTAGGTGTA+AGG | - | chr4.3:66353957-66353976 | None:intergenic | 35.0% | |
| ATTGGAGGAATTAAGCTTGA+TGG | + | chr4.3:66354587-66354606 | MS.gene93946:CDS | 35.0% | |
| ATTTCTCGTGATCAATCATG+TGG | - | chr4.3:66354028-66354047 | None:intergenic | 35.0% | |
| CAATGTCTATCCTAACAGAA+CGG | + | chr4.3:66352998-66353017 | MS.gene93946:intron | 35.0% | |
| CTGTTAGGATAGACATTGTA+TGG | - | chr4.3:66352996-66353015 | None:intergenic | 35.0% | |
| CTGTTCAACTTGCAAAACTA+GGG | + | chr4.3:66354669-66354688 | MS.gene93946:CDS | 35.0% | |
| GCAAAAGTCAACAATGAACT+TGG | - | chr4.3:66354917-66354936 | None:intergenic | 35.0% | |
| GCAGTCTGAATTATAAATGC+AGG | - | chr4.3:66352654-66352673 | None:intergenic | 35.0% | |
| GGTTATTATACCTGTTGAAC+AGG | + | chr4.3:66352544-66352563 | MS.gene93946:intron | 35.0% | |
| GTGTAAGGCTAATCAAAACA+AGG | - | chr4.3:66353942-66353961 | None:intergenic | 35.0% | |
| GTGTTATGTGAATGACAGTA+TGG | + | chr4.3:66354437-66354456 | MS.gene93946:intron | 35.0% | |
| GTTTGGATGTAGTGTTTATG+AGG | - | chr4.3:66351436-66351455 | None:intergenic | 35.0% | |
| TAAAAGAGGAAGAAGACAAC+TGG | - | chr4.3:66352285-66352304 | None:intergenic | 35.0% | |
| TAAGTGGCCCAAAAATTTGT+TGG | - | chr4.3:66353229-66353248 | None:intergenic | 35.0% | |
| TAATTCCTCCAATTTCTGTG+AGG | - | chr4.3:66354580-66354599 | None:intergenic | 35.0% | |
| TACATCCAAACATACCCTAA+AGG | + | chr4.3:66351445-66351464 | MS.gene93946:intron | 35.0% | |
| TACTAAGTTTCTGTTTGGGA+GGG | + | chr4.3:66351238-66351257 | MS.gene93946:intron | 35.0% | |
| TAGTACATCCAAATTGGCAT+CGG | - | chr4.3:66350894-66350913 | None:intergenic | 35.0% | |
| TAGTGAAAAACCACATGAAC+TGG | + | chr4.3:66351014-66351033 | MS.gene93946:intron | 35.0% | |
| TCATTTACCCACAAATGAGT+TGG | - | chr4.3:66352509-66352528 | None:intergenic | 35.0% | |
| TCCTAATTTGAGTGAAAAGG+GGG | + | chr4.3:66354868-66354887 | MS.gene93946:CDS | 35.0% | |
| TCTCTTTCTTTCACTTCCTT+AGG | + | chr4.3:66351869-66351888 | MS.gene93946:intron | 35.0% | |
| TGTGTTATACAAGGTATGTG+AGG | - | chr4.3:66350743-66350762 | None:intergenic | 35.0% | |
| TTAGGATCAAAAGTTGACCA+TGG | - | chr4.3:66354854-66354873 | None:intergenic | 35.0% | |
| TTATGTGAATGACAGTATGG+AGG | + | chr4.3:66354440-66354459 | MS.gene93946:intron | 35.0% | |
| TTCTTATAGATAGGAACGGA+GGG | + | chr4.3:66352949-66352968 | MS.gene93946:intron | 35.0% | |
| TTGGAGGAATTAAGCTTGAT+GGG | + | chr4.3:66354588-66354607 | MS.gene93946:CDS | 35.0% | |
| TTTCTTATAGATAGGAACGG+AGG | + | chr4.3:66352948-66352967 | MS.gene93946:intron | 35.0% | |
| ! | CAATGATTTTTCCAGTAGCA+TGG | - | chr4.3:66355114-66355133 | None:intergenic | 35.0% |
| !! | CTATTCCTTTAGGGTATGTT+TGG | - | chr4.3:66351453-66351472 | None:intergenic | 35.0% |
| !! | GATTACTACTTTTGGCCAAT+TGG | + | chr4.3:66353739-66353758 | MS.gene93946:intron | 35.0% |
| AAACCACATGAACTGGATTC+AGG | + | chr4.3:66351021-66351040 | MS.gene93946:intron | 40.0% | |
| AAAGGGAAAAAGGAGGACAT+TGG | - | chr4.3:66352684-66352703 | None:intergenic | 40.0% | |
| AACATGTGGTACATATGCAC+CGG | + | chr4.3:66354292-66354311 | MS.gene93946:intron | 40.0% | |
| AACCGACTGAAACTAACAGA+AGG | - | chr4.3:66352140-66352159 | None:intergenic | 40.0% | |
| AACTACATCTCCTAACAAGG+AGG | - | chr4.3:66353993-66354012 | None:intergenic | 40.0% | |
| AATCCAAGTCCCAAGATCAA+AGG | - | chr4.3:66351747-66351766 | None:intergenic | 40.0% | |
| ACTAAGTTTCTGTTTGGGAG+GGG | + | chr4.3:66351239-66351258 | MS.gene93946:intron | 40.0% | |
| AGAGATTGGACCACAAGTTA+AGG | + | chr4.3:66351795-66351814 | MS.gene93946:CDS | 40.0% | |
| AGTACATCCAAATTGGCATC+GGG | - | chr4.3:66350893-66350912 | None:intergenic | 40.0% | |
| ATGTAGTGTTTATGAGGGCA+AGG | - | chr4.3:66351430-66351449 | None:intergenic | 40.0% | |
| ATGTCTGGTAGGGTCAAATA+AGG | - | chr4.3:66353851-66353870 | None:intergenic | 40.0% | |
| ATTCCTTTGATCTTGGGACT+TGG | + | chr4.3:66351741-66351760 | MS.gene93946:intron | 40.0% | |
| CGCTTAACAGTTACAACGAA+TGG | - | chr4.3:66354977-66354996 | None:intergenic | 40.0% | |
| CTACCTACAGCAATTACAAG+CGG | + | chr4.3:66352726-66352745 | MS.gene93946:intron | 40.0% | |
| CTCCATAATTTAGGGACCAT+GGG | - | chr4.3:66353419-66353438 | None:intergenic | 40.0% | |
| CTGAACTTTCACAACCATGA+GGG | - | chr4.3:66354112-66354131 | None:intergenic | 40.0% | |
| CTGGTTTCAGCGAATAAAAG+AGG | - | chr4.3:66352299-66352318 | None:intergenic | 40.0% | |
| CTTACCACCAACTCATTTGT+GGG | + | chr4.3:66352499-66352518 | MS.gene93946:intron | 40.0% | |
| GACTGAATCTTCCAATCAAC+TGG | - | chr4.3:66350683-66350702 | None:intergenic | 40.0% | |
| GAGAGAGAATGAGTCAAAGA+AGG | + | chr4.3:66352869-66352888 | MS.gene93946:intron | 40.0% | |
| GCTGTTCAACTTGCAAAACT+AGG | + | chr4.3:66354668-66354687 | MS.gene93946:CDS | 40.0% | |
| GTACACATAAGCAAAAGTCG+GGG | + | chr4.3:66352207-66352226 | MS.gene93946:intron | 40.0% | |
| GTACTCGTAAGAAAAAGTCG+GGG | - | chr4.3:66353527-66353546 | None:intergenic | 40.0% | |
| GTGCATATGTACCACATGTT+GGG | - | chr4.3:66354292-66354311 | None:intergenic | 40.0% | |
| GTGGATCAGTGTGTTATACA+AGG | - | chr4.3:66350752-66350771 | None:intergenic | 40.0% | |
| GTTGATTGGAAGATTCAGTC+TGG | + | chr4.3:66350683-66350702 | MS.gene93946:CDS | 40.0% | |
| GTTGTAACTGTTAAGCGTGA+GGG | + | chr4.3:66354980-66354999 | MS.gene93946:CDS | 40.0% | |
| TAACCGCTTGTAATTGCTGT+AGG | - | chr4.3:66352732-66352751 | None:intergenic | 40.0% | |
| TAGGATCAGTCATAGAGTAG+TGG | - | chr4.3:66354339-66354358 | None:intergenic | 40.0% | |
| TATTTGACCCTACCAGACAT+GGG | + | chr4.3:66353851-66353870 | MS.gene93946:intron | 40.0% | |
| TCTCCATAATTTAGGGACCA+TGG | - | chr4.3:66353420-66353439 | None:intergenic | 40.0% | |
| TCTGAACTTTCACAACCATG+AGG | - | chr4.3:66354113-66354132 | None:intergenic | 40.0% | |
| TCTTGACTACAAAACTCCAG+CGG | + | chr4.3:66354763-66354782 | MS.gene93946:CDS | 40.0% | |
| TGAACTTTCACAACCATGAG+GGG | - | chr4.3:66354111-66354130 | None:intergenic | 40.0% | |
| TGCATATGTACCACATGTTG+GGG | - | chr4.3:66354291-66354310 | None:intergenic | 40.0% | |
| TGGGAAACCTTCAATGTTAC+CGG | - | chr4.3:66354314-66354333 | None:intergenic | 40.0% | |
| TGTAGTGTTTATGAGGGCAA+GGG | - | chr4.3:66351429-66351448 | None:intergenic | 40.0% | |
| TTATTTGACCCTACCAGACA+TGG | + | chr4.3:66353850-66353869 | MS.gene93946:intron | 40.0% | |
| ! | ACCATGGGAGTGTAAAGAAT+GGG | - | chr4.3:66353404-66353423 | None:intergenic | 40.0% |
| ! | ACCCCCTTTTCACTCAAATT+AGG | - | chr4.3:66354872-66354891 | None:intergenic | 40.0% |
| ! | ATATGCACCGGTAACATTGA+AGG | + | chr4.3:66354304-66354323 | MS.gene93946:intron | 40.0% |
| ! | ATCGACTTCGTTAAGAGCTT+AGG | + | chr4.3:66354728-66354747 | MS.gene93946:CDS | 40.0% |
| ! | ATGAGATTGGCCGATCAATT+CGG | - | chr4.3:66351062-66351081 | None:intergenic | 40.0% |
| ! | GGTATGTGAGGAAATTTTCG+AGG | - | chr4.3:66350731-66350750 | None:intergenic | 40.0% |
| ! | GTCCTTCTGTTAGTTTCAGT+CGG | + | chr4.3:66352135-66352154 | MS.gene93946:intron | 40.0% |
| ! | GTTAGGAGATGTAGTTTGTG+TGG | + | chr4.3:66353997-66354016 | MS.gene93946:intron | 40.0% |
| ! | GTTAGTTTCAGTCGGTTAAG+TGG | + | chr4.3:66352143-66352162 | MS.gene93946:intron | 40.0% |
| ! | TAGGTTGAAAGGGAAAAAGG+AGG | - | chr4.3:66352691-66352710 | None:intergenic | 40.0% |
| ! | TTTACCCACAAATGAGTTGG+TGG | - | chr4.3:66352506-66352525 | None:intergenic | 40.0% |
| !! | ACTTCATTGGTCTTTGGAGT+TGG | - | chr4.3:66350629-66350648 | None:intergenic | 40.0% |
| !! | ATTAGCCTTACCTCCTTGTT+AGG | + | chr4.3:66353980-66353999 | MS.gene93946:intron | 40.0% |
| !! | CAGTCATAGAGTAGTGGATT+GGG | - | chr4.3:66354333-66354352 | None:intergenic | 40.0% |
| !! | GATTAGCCTTACACCTAGAA+AGG | + | chr4.3:66353948-66353967 | MS.gene93946:intron | 40.0% |
| !! | TCAGTCATAGAGTAGTGGAT+TGG | - | chr4.3:66354334-66354353 | None:intergenic | 40.0% |
| AATGGTGAGACCTGTTCAAC+AGG | - | chr4.3:66352557-66352576 | None:intergenic | 45.0% | |
| ACAGGTCTCACCATTTACCA+TGG | + | chr4.3:66352562-66352581 | MS.gene93946:intron | 45.0% | |
| ACATCACTGAAGAGTCCATC+TGG | + | chr4.3:66354788-66354807 | MS.gene93946:CDS | 45.0% | |
| ACATCTCGCTCAACTAGTGA+AGG | + | chr4.3:66355009-66355028 | MS.gene93946:CDS | 45.0% | |
| ACCCATTCTTTACACTCCCA+TGG | + | chr4.3:66353400-66353419 | MS.gene93946:intron | 45.0% | |
| AGATTCAGTCTGGTGCTCTA+AGG | + | chr4.3:66350693-66350712 | MS.gene93946:CDS | 45.0% | |
| AGCATACACAGTGGTTGTCA+AGG | + | chr4.3:66353880-66353899 | MS.gene93946:intron | 45.0% | |
| AGTCACAGCTCACAGGAATA+AGG | - | chr4.3:66352463-66352482 | None:intergenic | 45.0% | |
| AGTTGACCATGGTATTCCAG+TGG | - | chr4.3:66354843-66354862 | None:intergenic | 45.0% | |
| ATACTCTTTGCCCCAACATG+TGG | + | chr4.3:66354278-66354297 | MS.gene93946:intron | 45.0% | |
| ATTGCACCACTGGAATACCA+TGG | + | chr4.3:66354834-66354853 | MS.gene93946:CDS | 45.0% | |
| ATTTGACCCTACCAGACATG+GGG | + | chr4.3:66353852-66353871 | MS.gene93946:intron | 45.0% | |
| CATCTCCTAACAAGGAGGTA+AGG | - | chr4.3:66353988-66354007 | None:intergenic | 45.0% | |
| CGTTGTAACTGTTAAGCGTG+AGG | + | chr4.3:66354979-66354998 | MS.gene93946:CDS | 45.0% | |
| CTAAGTTTCTGTTTGGGAGG+GGG | + | chr4.3:66351240-66351259 | MS.gene93946:intron | 45.0% | |
| CTAGCATCAACCCAGTTGAT+TGG | + | chr4.3:66350669-66350688 | MS.gene93946:CDS | 45.0% | |
| CTCCCATGGTCCCTAAATTA+TGG | + | chr4.3:66353414-66353433 | MS.gene93946:intron | 45.0% | |
| CTTCAGTACAGTTCCTATGG+CGG | + | chr4.3:66350456-66350475 | MS.gene93946:CDS | 45.0% | |
| CTTGACTACAAAACTCCAGC+GGG | + | chr4.3:66354764-66354783 | MS.gene93946:CDS | 45.0% | |
| GAAAAAGTCGGGGACCAAAT+TGG | - | chr4.3:66353517-66353536 | None:intergenic | 45.0% | |
| GAACCTGAATCCAGTTCATG+TGG | - | chr4.3:66351027-66351046 | None:intergenic | 45.0% | |
| GAAGGTAAGGTTAGAGACAG+AGG | - | chr4.3:66354058-66354077 | None:intergenic | 45.0% | |
| GAGCAAAGCTGAAGATGCTT+GGG | + | chr4.3:66355072-66355091 | MS.gene93946:CDS | 45.0% | |
| GATTCAGTCTGGTGCTCTAA+GGG | + | chr4.3:66350694-66350713 | MS.gene93946:CDS | 45.0% | |
| GCAGTAATACATTGCACCAC+TGG | + | chr4.3:66354824-66354843 | MS.gene93946:CDS | 45.0% | |
| GCATCTTCAGCTTTGCTCAA+AGG | - | chr4.3:66355070-66355089 | None:intergenic | 45.0% | |
| GCTCTTCAGTACAGTTCCTA+TGG | + | chr4.3:66350453-66350472 | MS.gene93946:CDS | 45.0% | |
| GCTTACCACCAACTCATTTG+TGG | + | chr4.3:66352498-66352517 | MS.gene93946:intron | 45.0% | |
| GGAATTAAGCTTGATGGGAC+TGG | + | chr4.3:66354593-66354612 | MS.gene93946:CDS | 45.0% | |
| GGTCTCAGGTTCGATTATTC+CGG | + | chr4.3:66350864-66350883 | MS.gene93946:intron | 45.0% | |
| GGTGCATATGTACCACATGT+TGG | - | chr4.3:66354293-66354312 | None:intergenic | 45.0% | |
| GTAAGGTTAGAGACAGAGGA+AGG | - | chr4.3:66354054-66354073 | None:intergenic | 45.0% | |
| GTTGTCGTGGATTTAACACC+TGG | + | chr4.3:66354890-66354909 | MS.gene93946:CDS | 45.0% | |
| TAAGTTTCTGTTTGGGAGGG+GGG | + | chr4.3:66351241-66351260 | MS.gene93946:intron | 45.0% | |
| TACTTCTTCATTGCCCCTCA+TGG | + | chr4.3:66354095-66354114 | MS.gene93946:intron | 45.0% | |
| TATGCTTGTATCCCCATGTC+TGG | - | chr4.3:66353866-66353885 | None:intergenic | 45.0% | |
| TCACAGGAATAAGGCCATCA+TGG | - | chr4.3:66352454-66352473 | None:intergenic | 45.0% | |
| TGAGCAAAGCTGAAGATGCT+TGG | + | chr4.3:66355071-66355090 | MS.gene93946:CDS | 45.0% | |
| TGATCTTGGGACTTGGATTC+AGG | + | chr4.3:66351748-66351767 | MS.gene93946:intron | 45.0% | |
| TGTGAATGACAGTATGGAGG+TGG | + | chr4.3:66354443-66354462 | MS.gene93946:intron | 45.0% | |
| TTGTATCCCCATGTCTGGTA+GGG | - | chr4.3:66353861-66353880 | None:intergenic | 45.0% | |
| ! | ATGGGAGTGTAAAGAATGGG+TGG | - | chr4.3:66353401-66353420 | None:intergenic | 45.0% |
| ! | CTGATTCGAGCGACCAAATT+GGG | + | chr4.3:66353688-66353707 | MS.gene93946:intron | 45.0% |
| ! | GACCATGGGAGTGTAAAGAA+TGG | - | chr4.3:66353405-66353424 | None:intergenic | 45.0% |
| ! | TCTGATTCGAGCGACCAAAT+TGG | + | chr4.3:66353687-66353706 | MS.gene93946:intron | 45.0% |
| ! | TGGCGAGCAGAAGAATGTTT+TGG | + | chr4.3:66354613-66354632 | MS.gene93946:CDS | 45.0% |
| !! | AGTATTGATGGCCATGCTAC+TGG | + | chr4.3:66355100-66355119 | MS.gene93946:CDS | 45.0% |
| !! | GCTTGGGCTAAGAGTATTGA+TGG | + | chr4.3:66355088-66355107 | MS.gene93946:CDS | 45.0% |
| !! | GTTTTGGTAACTGCTGCTTC+AGG | + | chr4.3:66354629-66354648 | MS.gene93946:CDS | 45.0% |
| !! | TTGGTCTTTGGAGTTGGTAC+AGG | - | chr4.3:66350623-66350642 | None:intergenic | 45.0% |
| !! | ATTATTATTAATAAATATTG+TGG | - | chr4.3:66352759-66352778 | None:intergenic | 5.0% |
| !! | TTATTATTAATAAATATTGT+GGG | - | chr4.3:66352758-66352777 | None:intergenic | 5.0% |
| AACAACATGGAGTGGAGCTG+TGG | + | chr4.3:66353772-66353791 | MS.gene93946:intron | 50.0% | |
| AACTGTTAAGCGTGAGGGCT+TGG | + | chr4.3:66354985-66355004 | MS.gene93946:CDS | 50.0% | |
| AGTGTTTATGAGGGCAAGGG+AGG | - | chr4.3:66351426-66351445 | None:intergenic | 50.0% | |
| CTCGCTCAACTAGTGAAGGA+TGG | + | chr4.3:66355013-66355032 | MS.gene93946:CDS | 50.0% | |
| CTTGTATCCCCATGTCTGGT+AGG | - | chr4.3:66353862-66353881 | None:intergenic | 50.0% | |
| GCAGGAGAGGTAGTAGAGAT+TGG | + | chr4.3:66351781-66351800 | MS.gene93946:CDS | 50.0% | |
| GGAGTGTAAAGAATGGGTGG+TGG | - | chr4.3:66353398-66353417 | None:intergenic | 50.0% | |
| GGGGATACAAGCATACACAG+TGG | + | chr4.3:66353871-66353890 | MS.gene93946:intron | 50.0% | |
| GGTGCGAGTTTACCTATTGC+CGG | + | chr4.3:66354536-66354555 | MS.gene93946:CDS | 50.0% | |
| GTCAACAATGAACTTGGGCC+AGG | - | chr4.3:66354911-66354930 | None:intergenic | 50.0% | |
| GTGTTTATGAGGGCAAGGGA+GGG | - | chr4.3:66351425-66351444 | None:intergenic | 50.0% | |
| TGGTTCCCAGATGCGCAAAA+TGG | - | chr4.3:66353099-66353118 | None:intergenic | 50.0% | |
| TGTTAAGCTCTCGCTAGCCA+CGG | - | chr4.3:66354483-66354502 | None:intergenic | 50.0% | |
| TGTTTATGAGGGCAAGGGAG+GGG | - | chr4.3:66351424-66351443 | None:intergenic | 50.0% | |
| ! | CAGAGATAGGGGCATGAGAT+TGG | - | chr4.3:66351075-66351094 | None:intergenic | 50.0% |
| ! | CCAAATTGGCATCGGGAAAC+CGG | - | chr4.3:66350886-66350905 | None:intergenic | 50.0% |
| ! | TGCACATGAGCACCGTGAAA+GGG | - | chr4.3:66351999-66352018 | None:intergenic | 50.0% |
| ! | TGGGTCCATTTTGCGCATCT+GGG | + | chr4.3:66353091-66353110 | MS.gene93946:intron | 50.0% |
| ! | TTGCACATGAGCACCGTGAA+AGG | - | chr4.3:66352000-66352019 | None:intergenic | 50.0% |
| ! | TTGGGTCCATTTTGCGCATC+TGG | + | chr4.3:66353090-66353109 | MS.gene93946:intron | 50.0% |
| ! | TTGGTAACTGCTGCTTCAGG+TGG | + | chr4.3:66354632-66354651 | MS.gene93946:CDS | 50.0% |
| !! | ACTTGTCGTGCTGCTTCTCA+AGG | + | chr4.3:66350843-66350862 | MS.gene93946:intron | 50.0% |
| !! | GATTCAGGCACTGATGTAGC+AGG | + | chr4.3:66351763-66351782 | MS.gene93946:intron | 50.0% |
| AACATGGAGTGGAGCTGTGG+AGG | + | chr4.3:66353775-66353794 | MS.gene93946:intron | 55.0% | |
| AACCACGTGACAGCCACTTG+TGG | + | chr4.3:66354695-66354714 | MS.gene93946:CDS | 55.0% | |
| AGCTGAGACTTCAGGTGGTC+TGG | - | chr4.3:66354510-66354529 | None:intergenic | 55.0% | |
| CAGTACAGTTCCTATGGCGG+AGG | + | chr4.3:66350459-66350478 | MS.gene93946:CDS | 55.0% | |
| CCGGTTTCCCGATGCCAATT+TGG | + | chr4.3:66350883-66350902 | MS.gene93946:intron | 55.0% | |
| CCTGAAGTCTCAGCTGCTGA+AGG | + | chr4.3:66354515-66354534 | MS.gene93946:CDS | 55.0% | |
| CCTTCAGCAGCTGAGACTTC+AGG | - | chr4.3:66354518-66354537 | None:intergenic | 55.0% | |
| CGGAGGAGTCTCTGGATTGA+AGG | + | chr4.3:66350476-66350495 | MS.gene93946:CDS | 55.0% | |
| CGTGACGCCCTCACAGAAAT+TGG | + | chr4.3:66354569-66354588 | MS.gene93946:CDS | 55.0% | |
| CTCTTCAGTGATGTTCCCGC+TGG | - | chr4.3:66354782-66354801 | None:intergenic | 55.0% | |
| GACGCCCTCACAGAAATTGG+AGG | + | chr4.3:66354572-66354591 | MS.gene93946:CDS | 55.0% | |
| GAGTGAAAAGGGGGTTGTCG+TGG | + | chr4.3:66354877-66354896 | MS.gene93946:CDS | 55.0% | |
| GATGTTGCGAGCACCACAAG+TGG | - | chr4.3:66354711-66354730 | None:intergenic | 55.0% | |
| TCAGCAGCTGAGACTTCAGG+TGG | - | chr4.3:66354515-66354534 | None:intergenic | 55.0% | |
| ! | ACTGCTGCTTCAGGTGGTGT+AGG | + | chr4.3:66354638-66354657 | MS.gene93946:CDS | 55.0% |
| ! | TCTGTTTGGGAGGGGGGTTT+TGG | + | chr4.3:66351247-66351266 | MS.gene93946:intron | 55.0% |
| !! | AGGCACTGATGTAGCAGGAG+AGG | + | chr4.3:66351768-66351787 | MS.gene93946:intron | 55.0% |
| !! | GTGCTGCTTCTCAAGGTCTC+AGG | + | chr4.3:66350850-66350869 | MS.gene93946:intron | 55.0% |
| !! | TAAGAGCTTAGGCGCTGACG+AGG | + | chr4.3:66354739-66354758 | MS.gene93946:CDS | 55.0% |
| !! | TGGACTAGCTGAGTTTGCCG+TGG | + | chr4.3:66354463-66354482 | MS.gene93946:CDS | 55.0% |
| !!! | TTTGGGAGGGGGGTTTTGGA+GGG | + | chr4.3:66351251-66351270 | MS.gene93946:intron | 55.0% |
| CACCACAAGTGGCTGTCACG+TGG | - | chr4.3:66354700-66354719 | None:intergenic | 60.0% | |
| CGAGCTGTGAGACCGGCAAT+AGG | - | chr4.3:66354551-66354570 | None:intergenic | 60.0% | |
| TATGAGGGCAAGGGAGGGGA+GGG | - | chr4.3:66351420-66351439 | None:intergenic | 60.0% | |
| TCCAGAGACTCCTCCGCCAT+AGG | - | chr4.3:66350472-66350491 | None:intergenic | 60.0% | |
| TTATGAGGGCAAGGGAGGGG+AGG | - | chr4.3:66351421-66351440 | None:intergenic | 60.0% | |
| ! | TCCTATGGCGGAGGAGTCTC+TGG | + | chr4.3:66350468-66350487 | MS.gene93946:CDS | 60.0% |
| !! | GTTTGGGAGGGGGGTTTTGG+AGG | + | chr4.3:66351250-66351269 | MS.gene93946:intron | 60.0% |
| GGCGTCACGAGCTGTGAGAC+CGG | - | chr4.3:66354558-66354577 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 66350432 | 66355144 | 66350432 | ID=MS.gene93946 |
| chr4.3 | mRNA | 66350432 | 66355144 | 66350432 | ID=MS.gene93946.t1;Parent=MS.gene93946 |
| chr4.3 | exon | 66350432 | 66350497 | 66350432 | ID=MS.gene93946.t1.exon1;Parent=MS.gene93946.t1 |
| chr4.3 | CDS | 66350432 | 66350497 | 66350432 | ID=cds.MS.gene93946.t1;Parent=MS.gene93946.t1 |
| chr4.3 | exon | 66350608 | 66350752 | 66350608 | ID=MS.gene93946.t1.exon2;Parent=MS.gene93946.t1 |
| chr4.3 | CDS | 66350608 | 66350752 | 66350608 | ID=cds.MS.gene93946.t1;Parent=MS.gene93946.t1 |
| chr4.3 | exon | 66351770 | 66351861 | 66351770 | ID=MS.gene93946.t1.exon3;Parent=MS.gene93946.t1 |
| chr4.3 | CDS | 66351770 | 66351861 | 66351770 | ID=cds.MS.gene93946.t1;Parent=MS.gene93946.t1 |
| chr4.3 | exon | 66354455 | 66355144 | 66354455 | ID=MS.gene93946.t1.exon4;Parent=MS.gene93946.t1 |
| chr4.3 | CDS | 66354455 | 66355144 | 66354455 | ID=cds.MS.gene93946.t1;Parent=MS.gene93946.t1 |
| Gene Sequence |
| Protein sequence |
