Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049424.t1 | XP_013461475.1 | 99.4 | 346 | 2 | 0 | 26 | 371 | 1 | 346 | 1.10E-189 | 672.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049424.t1 | A7RK30 | 40.5 | 336 | 182 | 7 | 28 | 360 | 41 | 361 | 4.1e-60 | 233.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049424.t1 | A0A072VBF3 | 99.4 | 346 | 2 | 0 | 26 | 371 | 1 | 346 | 7.8e-190 | 672.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049424 | MS.gene049653 | 0.823376 | 1.43E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene050559 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene050561 | 0.804566 | 2.03E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene050987 | 0.846492 | 2.10E-59 | -1.69E-46 |
| MS.gene049424 | MS.gene051349 | 0.803425 | 3.51E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene052176 | 0.820238 | 7.62E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene052426 | 0.811084 | 8.36E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene052500 | 0.833893 | 4.11E-56 | -1.69E-46 |
| MS.gene049424 | MS.gene052502 | 0.830312 | 3.15E-55 | -1.69E-46 |
| MS.gene049424 | MS.gene052824 | 0.819087 | 1.40E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene052826 | 0.831495 | 1.62E-55 | -1.69E-46 |
| MS.gene049424 | MS.gene052954 | 0.804879 | 1.75E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene053006 | 0.800483 | 1.41E-48 | -1.69E-46 |
| MS.gene049424 | MS.gene053188 | 0.835873 | 1.30E-56 | -1.69E-46 |
| MS.gene049424 | MS.gene053216 | 0.85577 | 5.05E-62 | -1.69E-46 |
| MS.gene049424 | MS.gene053575 | 0.842175 | 3.04E-58 | -1.69E-46 |
| MS.gene049424 | MS.gene054537 | 0.82916 | 6.01E-55 | -1.69E-46 |
| MS.gene049424 | MS.gene05510 | 0.805439 | 1.33E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene056506 | 0.820665 | 6.08E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene056873 | 0.800228 | 1.59E-48 | -1.69E-46 |
| MS.gene049424 | MS.gene057392 | 0.839555 | 1.48E-57 | -1.69E-46 |
| MS.gene049424 | MS.gene05795 | 0.822915 | 1.83E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene058008 | 0.801231 | 9.93E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene058009 | 0.815634 | 8.36E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene059317 | 0.821327 | 4.28E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene060310 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene049424 | MS.gene060840 | 0.845324 | 4.36E-59 | -1.69E-46 |
| MS.gene049424 | MS.gene062501 | 0.844681 | 6.50E-59 | -1.69E-46 |
| MS.gene049424 | MS.gene063108 | 0.828893 | 6.98E-55 | -1.69E-46 |
| MS.gene049424 | MS.gene066067 | 0.849538 | 3.03E-60 | -1.69E-46 |
| MS.gene049424 | MS.gene066342 | 0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene066362 | 0.808452 | 3.08E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene066427 | 0.810114 | 1.35E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene067173 | 0.829366 | 5.36E-55 | -1.69E-46 |
| MS.gene049424 | MS.gene06739 | 0.806657 | 7.40E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene067635 | 0.85845 | 8.17E-63 | -1.69E-46 |
| MS.gene049424 | MS.gene06797 | 0.961993 | 2.37E-120 | -1.69E-46 |
| MS.gene049424 | MS.gene068028 | 0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene06836 | 0.801644 | 8.17E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene068637 | 0.810979 | 8.80E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene06865 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene068987 | 0.850193 | 1.99E-60 | -1.69E-46 |
| MS.gene049424 | MS.gene06957 | 0.810667 | 1.03E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene073003 | 0.839577 | 1.46E-57 | -1.69E-46 |
| MS.gene049424 | MS.gene073032 | 0.822827 | 1.92E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene08319 | 0.840109 | 1.06E-57 | -1.69E-46 |
| MS.gene049424 | MS.gene08486 | 0.843161 | 1.66E-58 | -1.69E-46 |
| MS.gene049424 | MS.gene20302 | 0.806788 | 6.94E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene21410 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene049424 | MS.gene21486 | 0.819478 | 1.14E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene21911 | 0.800661 | 1.30E-48 | -1.69E-46 |
| MS.gene049424 | MS.gene22314 | 0.818614 | 1.79E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene23808 | 0.811746 | 6.00E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene24924 | 0.825226 | 5.26E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene25012 | 0.845998 | 2.86E-59 | -1.69E-46 |
| MS.gene049424 | MS.gene25201 | 0.808585 | 2.88E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene26552 | 0.801253 | 9.83E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene28291 | 0.837789 | 4.22E-57 | -1.69E-46 |
| MS.gene049424 | MS.gene29405 | 0.817534 | 3.14E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene31503 | 0.801667 | 8.08E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene31802 | 0.816307 | 5.92E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene32361 | 0.813846 | 2.08E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene34687 | 0.806503 | 7.97E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene35826 | 0.822784 | 1.97E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene40366 | 0.810166 | 1.32E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene43459 | 0.815468 | 9.10E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene43537 | 0.806995 | 6.28E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene44603 | 0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene45422 | 0.80787 | 4.09E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene46954 | 0.805686 | 1.18E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene47818 | 0.815265 | 1.01E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene48435 | 0.821561 | 3.78E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene49940 | 0.824051 | 9.95E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene51650 | 0.821034 | 5.00E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene52448 | 0.814255 | 1.69E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene53935 | 0.821658 | 3.59E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene54512 | 0.800497 | 1.40E-48 | -1.69E-46 |
| MS.gene049424 | MS.gene56431 | 0.809028 | 2.32E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene56546 | 0.836808 | 7.53E-57 | -1.69E-46 |
| MS.gene049424 | MS.gene57183 | 0.817112 | 3.90E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene57765 | 0.832903 | 7.25E-56 | -1.69E-46 |
| MS.gene049424 | MS.gene57766 | 0.832279 | 1.03E-55 | -1.69E-46 |
| MS.gene049424 | MS.gene57768 | 0.827828 | 1.26E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene57894 | 0.837273 | 5.73E-57 | -1.69E-46 |
| MS.gene049424 | MS.gene59215 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene049424 | MS.gene59336 | 0.804733 | 1.88E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene60680 | 0.803184 | 3.94E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene61162 | 0.843717 | 1.18E-58 | -1.69E-46 |
| MS.gene049424 | MS.gene61239 | 0.808399 | 3.16E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene63673 | 0.832846 | 7.49E-56 | -1.69E-46 |
| MS.gene049424 | MS.gene64243 | 0.807019 | 6.20E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene65122 | 0.814778 | 1.30E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene65413 | 0.834096 | 3.65E-56 | -1.69E-46 |
| MS.gene049424 | MS.gene65895 | 0.812806 | 3.52E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene65896 | 0.816145 | 6.43E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene67346 | 0.806986 | 6.30E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene67662 | 0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene68156 | 0.82493 | 6.18E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene68756 | 0.817638 | 2.97E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene69314 | 0.810119 | 1.35E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene70346 | 0.821141 | 4.73E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene71597 | 0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene73270 | 0.811463 | 6.91E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene73820 | 0.824024 | 1.01E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene74444 | 0.807657 | 4.54E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene74473 | 0.813636 | 2.32E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene75680 | 0.815049 | 1.13E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene75923 | 0.821043 | 4.98E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene76494 | 0.806273 | 8.91E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene77579 | 0.815302 | 9.91E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene79884 | 0.825778 | 3.89E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene80769 | 0.802351 | 5.85E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene81066 | 0.825779 | 3.89E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene82881 | 0.802171 | 6.37E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene83082 | 0.806688 | 7.28E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene85109 | 0.819702 | 1.01E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene85111 | 0.809969 | 1.45E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene85663 | 0.810835 | 9.46E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene88148 | 0.838456 | 2.84E-57 | -1.69E-46 |
| MS.gene049424 | MS.gene89344 | 0.811205 | 7.86E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene89511 | 0.833223 | 6.03E-56 | -1.69E-46 |
| MS.gene049424 | MS.gene90217 | 0.842601 | 2.34E-58 | -1.69E-46 |
| MS.gene049424 | MS.gene91907 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene92068 | 0.821472 | 3.96E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene92268 | 0.817684 | 2.90E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene93041 | 0.802433 | 5.62E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene93875 | 0.824271 | 8.83E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene93946 | 0.825908 | 3.63E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene95070 | 0.849698 | 2.74E-60 | -1.69E-46 |
| MS.gene049424 | MS.gene95096 | 0.817498 | 3.20E-52 | -1.69E-46 |
| MS.gene049424 | MS.gene95697 | 0.824186 | 9.25E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene96287 | 0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene96799 | 0.822781 | 1.97E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene96800 | 0.851162 | 1.06E-60 | -1.69E-46 |
| MS.gene049424 | MS.gene99465 | 0.817912 | 2.58E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene01765 | MS.gene049424 | PPI |
| MS.gene049424 | MS.gene01357 | PPI |
| MS.gene047515 | MS.gene049424 | PPI |
| MS.gene047518 | MS.gene049424 | PPI |
| MS.gene049424 | MS.gene01763 | PPI |
| MS.gene002379 | MS.gene049424 | PPI |
| MS.gene049424 | MS.gene002381 | PPI |
| MS.gene01359 | MS.gene049424 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049424.t1 | MTR_3g093620 | 99.422 | 346 | 2 | 0 | 26 | 371 | 1 | 346 | 0.0 | 695 |
| MS.gene049424.t1 | MTR_2g012420 | 30.233 | 344 | 212 | 8 | 26 | 361 | 1 | 324 | 5.37e-34 | 128 |
| MS.gene049424.t1 | MTR_4g086410 | 31.190 | 311 | 183 | 9 | 69 | 363 | 328 | 623 | 7.78e-33 | 129 |
| MS.gene049424.t1 | MTR_4g050760 | 30.795 | 302 | 197 | 4 | 65 | 361 | 30 | 324 | 1.74e-31 | 121 |
| MS.gene049424.t1 | MTR_2g012380 | 30.795 | 302 | 197 | 4 | 65 | 361 | 30 | 324 | 1.74e-31 | 121 |
| MS.gene049424.t1 | MTR_4g086400 | 31.270 | 307 | 188 | 9 | 69 | 363 | 188 | 483 | 4.59e-31 | 123 |
| MS.gene049424.t1 | MTR_4g086400 | 31.270 | 307 | 188 | 9 | 69 | 363 | 328 | 623 | 1.11e-30 | 123 |
| MS.gene049424.t1 | MTR_4g029500 | 30.100 | 299 | 201 | 5 | 65 | 361 | 81 | 373 | 1.18e-28 | 115 |
| MS.gene049424.t1 | MTR_2g012380 | 32.927 | 246 | 153 | 4 | 65 | 305 | 30 | 268 | 1.31e-28 | 112 |
| MS.gene049424.t1 | MTR_8g064610 | 28.803 | 309 | 173 | 10 | 65 | 360 | 106 | 380 | 8.64e-24 | 101 |
| MS.gene049424.t1 | MTR_2g012420 | 28.745 | 247 | 172 | 2 | 116 | 361 | 10 | 253 | 5.58e-20 | 88.6 |
| MS.gene049424.t1 | MTR_4g050710 | 28.745 | 247 | 172 | 2 | 116 | 361 | 4 | 247 | 6.10e-20 | 88.6 |
| MS.gene049424.t1 | MTR_6g012170 | 28.213 | 319 | 179 | 11 | 55 | 360 | 35 | 316 | 5.66e-18 | 84.0 |
| MS.gene049424.t1 | MTR_6g012160 | 32.099 | 243 | 138 | 8 | 55 | 286 | 35 | 261 | 1.12e-17 | 83.2 |
| MS.gene049424.t1 | MTR_7g034395 | 29.012 | 324 | 176 | 11 | 53 | 360 | 28 | 313 | 3.79e-16 | 79.0 |
| MS.gene049424.t1 | MTR_7g406860 | 26.335 | 281 | 183 | 8 | 93 | 360 | 72 | 341 | 4.55e-16 | 79.0 |
| MS.gene049424.t1 | MTR_8g095220 | 25.301 | 249 | 168 | 8 | 117 | 360 | 187 | 422 | 2.32e-14 | 74.3 |
| MS.gene049424.t1 | MTR_2g012420 | 28.497 | 193 | 134 | 2 | 170 | 361 | 3 | 192 | 6.08e-14 | 70.1 |
| MS.gene049424.t1 | MTR_4g036310 | 33.149 | 181 | 107 | 5 | 55 | 225 | 29 | 205 | 9.17e-14 | 72.0 |
| MS.gene049424.t1 | MTR_2g095840 | 27.407 | 270 | 179 | 5 | 42 | 301 | 46 | 308 | 4.77e-13 | 70.1 |
| MS.gene049424.t1 | MTR_4g033205 | 30.601 | 183 | 109 | 6 | 55 | 225 | 29 | 205 | 4.01e-12 | 67.0 |
| MS.gene049424.t1 | MTR_4g032995 | 30.601 | 183 | 109 | 6 | 55 | 225 | 29 | 205 | 4.09e-12 | 67.0 |
| MS.gene049424.t1 | MTR_0001s0660 | 23.664 | 393 | 221 | 13 | 21 | 360 | 5 | 371 | 8.23e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049424.t1 | AT3G56460 | 77.101 | 345 | 78 | 1 | 26 | 369 | 1 | 345 | 0.0 | 523 |
| MS.gene049424.t1 | AT1G49670 | 31.546 | 317 | 184 | 10 | 69 | 368 | 328 | 628 | 3.11e-31 | 125 |
| MS.gene049424.t1 | AT1G49670 | 30.088 | 339 | 183 | 12 | 69 | 368 | 328 | 651 | 2.08e-29 | 120 |
| MS.gene049424.t1 | AT4G21580 | 29.866 | 298 | 203 | 4 | 65 | 360 | 30 | 323 | 2.21e-28 | 113 |
| MS.gene049424.t1 | AT5G61510 | 29.431 | 299 | 203 | 5 | 65 | 361 | 56 | 348 | 1.27e-25 | 106 |
| MS.gene049424.t1 | AT4G21580 | 29.195 | 298 | 199 | 5 | 65 | 360 | 30 | 317 | 2.59e-25 | 104 |
| MS.gene049424.t1 | AT5G61510 | 29.431 | 299 | 203 | 5 | 65 | 361 | 113 | 405 | 2.65e-25 | 106 |
| MS.gene049424.t1 | AT4G21580 | 28.328 | 293 | 206 | 2 | 69 | 360 | 1 | 290 | 7.23e-25 | 103 |
| MS.gene049424.t1 | AT1G23740 | 26.852 | 324 | 189 | 11 | 50 | 360 | 94 | 382 | 2.21e-23 | 100 |
| MS.gene049424.t1 | AT3G15090 | 27.353 | 340 | 199 | 13 | 50 | 362 | 48 | 366 | 2.05e-17 | 83.2 |
| MS.gene049424.t1 | AT3G45770 | 25.325 | 308 | 215 | 8 | 6 | 305 | 17 | 317 | 7.88e-14 | 72.4 |
| MS.gene049424.t1 | AT4G13010 | 35.359 | 181 | 105 | 6 | 55 | 225 | 27 | 205 | 9.43e-14 | 72.0 |
| MS.gene049424.t1 | AT5G63620 | 25.000 | 236 | 164 | 5 | 125 | 357 | 196 | 421 | 1.31e-12 | 68.9 |
| MS.gene049424.t1 | AT5G63620 | 25.000 | 236 | 164 | 5 | 125 | 357 | 196 | 421 | 3.01e-12 | 68.2 |
| MS.gene049424.t1 | AT3G45770 | 26.667 | 240 | 168 | 4 | 71 | 305 | 3 | 239 | 5.24e-12 | 66.2 |
Find 101 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGCGAACATTCTAATAAT+TGG | 0.169619 | 3.1:-74932852 | MS.gene049424:CDS |
| GCTAATTACTTGCAGATTCT+TGG | 0.190783 | 3.1:-74934293 | MS.gene049424:CDS |
| TGATTCTTGGATATGATTAT+TGG | 0.197695 | 3.1:+74934383 | None:intergenic |
| CTTAAGGTCAAAAGGCTTAA+AGG | 0.221379 | 3.1:-74932942 | MS.gene049424:CDS |
| GGACAGTACATGGACTTTAT+TGG | 0.229971 | 3.1:-74931068 | MS.gene049424:CDS |
| GACAGTACATGGACTTTATT+GGG | 0.241684 | 3.1:-74931067 | MS.gene049424:CDS |
| CCTCCTTTGCCATTCATTCC+TGG | 0.241695 | 3.1:-74934254 | MS.gene049424:CDS |
| GTTTGTTCCTTTGCTGCTCT+TGG | 0.265097 | 3.1:-74934164 | MS.gene049424:CDS |
| GGAGCACTTGCTGTGGCATT+TGG | 0.265900 | 3.1:-74933825 | MS.gene049424:CDS |
| TTCATGAGCTTGCCTCCTAC+TGG | 0.267191 | 3.1:+74932900 | None:intergenic |
| AGGATCACCAACACGGAAAT+TGG | 0.272120 | 3.1:+74934187 | None:intergenic |
| TTTGTAGGTATTGCTAGTTT+TGG | 0.301867 | 3.1:-74933658 | MS.gene049424:intron |
| GATTCTTGGATATGATTATT+GGG | 0.311570 | 3.1:+74934384 | None:intergenic |
| TGTTGATCATGTGGTGGACT+TGG | 0.319846 | 3.1:-74933000 | MS.gene049424:CDS |
| AATCTTTGCGGCTTCTGAAA+TGG | 0.328075 | 3.1:-74932875 | MS.gene049424:CDS |
| TTAAGGTCAAAAGGCTTAAA+GGG | 0.333113 | 3.1:-74932941 | MS.gene049424:CDS |
| CTCCTACATCGGTTAGAGTT+AGG | 0.333628 | 3.1:-74934340 | MS.gene049424:CDS |
| GAACAAAACGTGCGTTGAAA+TGG | 0.339912 | 3.1:-74934465 | MS.gene049424:CDS |
| ATCTTTGCGGCTTCTGAAAT+GGG | 0.343716 | 3.1:-74932874 | MS.gene049424:CDS |
| GGTTGTGATTTGGTTGCTGC+TGG | 0.359205 | 3.1:-74933846 | MS.gene049424:CDS |
| TTGAGGGATAGGGTGATTCT+TGG | 0.360038 | 3.1:+74934370 | None:intergenic |
| CGTCTTCAACGCTCACCGTT+GGG | 0.366387 | 3.1:+74934414 | None:intergenic |
| TTCCTTACCTTAAATGGTTG+TGG | 0.375638 | 3.1:-74934534 | None:intergenic |
| ATCAGAGATAGGAAAGCTAT+AGG | 0.384250 | 3.1:-74930180 | MS.gene049424:CDS |
| GAGCGAACATTCTAATAATT+GGG | 0.396914 | 3.1:-74932851 | MS.gene049424:CDS |
| GGTCTTGCAGCTGTGCAAAT+TGG | 0.397069 | 3.1:-74933618 | MS.gene049424:CDS |
| GAATCACCCTATCCCTCAAT+TGG | 0.401681 | 3.1:-74934366 | MS.gene049424:CDS |
| CCTTCACTGCCATCAGAGAT+AGG | 0.409182 | 3.1:-74930191 | MS.gene049424:CDS |
| AATTTGTAGGTTTCGCGTGC+CGG | 0.416854 | 3.1:-74933871 | MS.gene049424:intron |
| CATAGAGCTCAGTTGAAATC+TGG | 0.418835 | 3.1:-74933780 | MS.gene049424:CDS |
| CGTGCCGGAGGGTTGTGATT+TGG | 0.423686 | 3.1:-74933856 | MS.gene049424:CDS |
| GTTCACATTTCTCATTCTTA+CGG | 0.428188 | 3.1:-74930961 | MS.gene049424:CDS |
| AGAGAATCTTCAAGAACAGC+TGG | 0.435112 | 3.1:+74931024 | None:intergenic |
| TCGTCTTCAACGCTCACCGT+TGG | 0.443222 | 3.1:+74934413 | None:intergenic |
| TCAATTGGATTCTCCTACAT+CGG | 0.456528 | 3.1:-74934351 | MS.gene049424:CDS |
| GGAGAATCCAATTGAGGGAT+AGG | 0.460120 | 3.1:+74934359 | None:intergenic |
| TTGGGTGCAGCAGGAGGTGT+GGG | 0.460493 | 3.1:-74933639 | MS.gene049424:CDS |
| AAGAGTTCCTTAAGGTCAAA+AGG | 0.464102 | 3.1:-74932950 | MS.gene049424:CDS |
| TCAGGCATCGTTGATTCCGT+TGG | 0.466758 | 3.1:-74934221 | MS.gene049424:CDS |
| GGTGCAGCTCTTGAAATCAA+TGG | 0.469140 | 3.1:-74933024 | MS.gene049424:CDS |
| CTACTGTCTTGGTTGGCAAA+AGG | 0.470601 | 3.1:-74930994 | MS.gene049424:CDS |
| TCAGAGATAGGAAAGCTATA+GGG | 0.473276 | 3.1:-74930179 | MS.gene049424:CDS |
| AAATCTGATCCAGGAATGAA+TGG | 0.473348 | 3.1:+74934245 | None:intergenic |
| TTAACAAGAGCTATGTTAGC+AGG | 0.478741 | 3.1:+74932801 | None:intergenic |
| TCATGAGCTTGCCTCCTACT+GGG | 0.478839 | 3.1:+74932901 | None:intergenic |
| GCTATGTTAGCAGGGATGAC+AGG | 0.479328 | 3.1:+74932810 | None:intergenic |
| GTGCAGCTCTTGAAATCAAT+GGG | 0.486437 | 3.1:-74933023 | MS.gene049424:CDS |
| AGCTCAGTTGAAATCTGGTC+AGG | 0.487489 | 3.1:-74933775 | MS.gene049424:intron |
| TGCCTCCTACTGGGTCATAC+AGG | 0.492735 | 3.1:+74932910 | None:intergenic |
| TGCTAACATAGCTCTTGTTA+AGG | 0.494266 | 3.1:-74932799 | MS.gene049424:intron |
| GATGGCAGTGAAGGCGAGGT+TGG | 0.495840 | 3.1:+74930200 | None:intergenic |
| CTCTCAAGGAGCTACTGTCT+TGG | 0.497731 | 3.1:-74931005 | MS.gene049424:CDS |
| GTTTCATTACATAACAGAAT+CGG | 0.505113 | 3.1:-74934495 | MS.gene049424:CDS |
| GCATTTGGCACTTCACATGT+TGG | 0.508528 | 3.1:-74933810 | MS.gene049424:CDS |
| TGCTGCTGGAGCACTTGCTG+TGG | 0.510040 | 3.1:-74933832 | MS.gene049424:CDS |
| GTTGATCATGTGGTGGACTT+GGG | 0.511415 | 3.1:-74932999 | MS.gene049424:CDS |
| TGGCAGAATTGGACAGTACA+TGG | 0.511468 | 3.1:-74931078 | MS.gene049424:intron |
| TTTGGGTGCAGCAGGAGGTG+TGG | 0.512176 | 3.1:-74933640 | MS.gene049424:CDS |
| AGAGCAGCAAAGGAACAAAC+AGG | 0.514377 | 3.1:+74934167 | None:intergenic |
| CTATTGTCATTGCTGTTGCT+AGG | 0.516037 | 3.1:-74933581 | MS.gene049424:intron |
| TGTAGGTTTCGCGTGCCGGA+GGG | 0.517884 | 3.1:-74933867 | MS.gene049424:intron |
| TTGTAGGTTTCGCGTGCCGG+AGG | 0.522078 | 3.1:-74933868 | MS.gene049424:intron |
| AACACGGAAATTGGTAACAT+TGG | 0.526095 | 3.1:+74934196 | None:intergenic |
| TATAGCTTTCCTATCTCTGA+TGG | 0.527406 | 3.1:+74930182 | None:intergenic |
| AATGTTACCAATTTCCGTGT+TGG | 0.534038 | 3.1:-74934194 | MS.gene049424:CDS |
| ATCCTAACTCTAACCGATGT+AGG | 0.537658 | 3.1:+74934338 | None:intergenic |
| ATGTAGGAGAATCCAATTGA+GGG | 0.540400 | 3.1:+74934354 | None:intergenic |
| CTAATAATTGGGTTTGCAAG+TGG | 0.543319 | 3.1:-74932840 | MS.gene049424:CDS |
| AGCTCATGAAAGAATCTTTG+CGG | 0.548659 | 3.1:-74932887 | MS.gene049424:CDS |
| ATTAGCGAAATTCAAGCTTG+TGG | 0.550287 | 3.1:+74934310 | None:intergenic |
| ATAAGATCCAAGAGCAGCAA+AGG | 0.551039 | 3.1:+74934157 | None:intergenic |
| CCTATCTCTGATGGCAGTGA+AGG | 0.555242 | 3.1:+74930191 | None:intergenic |
| CCAGGAATGAATGGCAAAGG+AGG | 0.564534 | 3.1:+74934254 | None:intergenic |
| CTCTGATGGCAGTGAAGGCG+AGG | 0.567574 | 3.1:+74930196 | None:intergenic |
| CAAGGAGCTACTGTCTTGGT+TGG | 0.572684 | 3.1:-74931001 | MS.gene049424:CDS |
| TGTTCTTGAAGATTCTCTCA+AGG | 0.573910 | 3.1:-74931019 | MS.gene049424:CDS |
| ATTGGTAACATTGGAACCAA+CGG | 0.576019 | 3.1:+74934205 | None:intergenic |
| GAGTGTGAAAGAGTTCCTTA+AGG | 0.578196 | 3.1:-74932958 | MS.gene049424:CDS |
| GCAGATTCTTGGAAAGTACC+AGG | 0.581141 | 3.1:-74934282 | MS.gene049424:CDS |
| ATGGCAAAGGAGGTTTCTCC+TGG | 0.585688 | 3.1:+74934264 | None:intergenic |
| TGCAAATTGGAAAAGCATGT+GGG | 0.585981 | 3.1:-74933605 | MS.gene049424:CDS |
| TCATTCTTACGGCCTGTCAG+AGG | 0.586401 | 3.1:-74930950 | MS.gene049424:intron |
| GAGAATCCAATTGAGGGATA+GGG | 0.603597 | 3.1:+74934360 | None:intergenic |
| TCTTTGCGGCTTCTGAAATG+GGG | 0.609441 | 3.1:-74932873 | MS.gene049424:CDS |
| GATCCAGGAATGAATGGCAA+AGG | 0.610430 | 3.1:+74934251 | None:intergenic |
| TAACAAGAGCTATGTTAGCA+GGG | 0.614061 | 3.1:+74932802 | None:intergenic |
| GCAACCAAATCACAACCCTC+CGG | 0.621624 | 3.1:+74933852 | None:intergenic |
| CAGAAAATTGGGTGACCCAA+CGG | 0.628219 | 3.1:-74934429 | MS.gene049424:CDS |
| ATCAATGGGTGTTGATCATG+TGG | 0.629567 | 3.1:-74933009 | MS.gene049424:CDS |
| AACAAACAGGATCACCAACA+CGG | 0.633492 | 3.1:+74934180 | None:intergenic |
| GATGTAGGAGAATCCAATTG+AGG | 0.636037 | 3.1:+74934353 | None:intergenic |
| AGATAGGAAAGCTATAGGGA+AGG | 0.636916 | 3.1:-74930175 | MS.gene049424:CDS |
| GTCCTGTATGACCCAGTAGG+AGG | 0.637191 | 3.1:-74932912 | MS.gene049424:CDS |
| GTGCAAATTGGAAAAGCATG+TGG | 0.641885 | 3.1:-74933606 | MS.gene049424:CDS |
| GATGTCCTGTATGACCCAGT+AGG | 0.653197 | 3.1:-74932915 | MS.gene049424:CDS |
| GAGAATCTTCAAGAACAGCT+GGG | 0.655056 | 3.1:+74931025 | None:intergenic |
| AATGGGTGTTGATCATGTGG+TGG | 0.686665 | 3.1:-74933006 | MS.gene049424:CDS |
| ACAGTACATGGACTTTATTG+GGG | 0.692527 | 3.1:-74931066 | MS.gene049424:CDS |
| GTAAGAATGAGAAATGTGAA+CGG | 0.692858 | 3.1:+74930963 | None:intergenic |
| TATGTAATGAAACTGTGCAA+CGG | 0.714820 | 3.1:+74934505 | None:intergenic |
| GCAAATTGGAAAAGCATGTG+GGG | 0.732786 | 3.1:-74933604 | MS.gene049424:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTTAAACTAAAAAAAT+AGG | + | chr3.1:74934260-74934279 | None:intergenic | 10.0% |
| !! | AAATACACAAATTATTAGAA+CGG | + | chr3.1:74933749-74933768 | None:intergenic | 15.0% |
| !! | AACAAAAAATGACATATAAA+TGG | - | chr3.1:74932387-74932406 | MS.gene049424:intron | 15.0% |
| !! | ACAAAAAATGACATATAAAT+GGG | - | chr3.1:74932388-74932407 | MS.gene049424:intron | 15.0% |
| !! | TATAAATTCTTTGAATTTGT+AGG | - | chr3.1:74930768-74930787 | MS.gene049424:intron | 15.0% |
| !! | TATTTGGTATATAATGAAAA+AGG | - | chr3.1:74932858-74932877 | MS.gene049424:CDS | 15.0% |
| !! | TTATGTATGTAGTTTAAATT+AGG | + | chr3.1:74933171-74933190 | None:intergenic | 15.0% |
| !!! | AAATATTTTATGGATTATGT+TGG | - | chr3.1:74934217-74934236 | MS.gene049424:CDS | 15.0% |
| !!! | AATTTTGGTGAAATATTTTA+TGG | - | chr3.1:74934207-74934226 | MS.gene049424:CDS | 15.0% |
| !!! | TAAAGTTATAGTTGTTTTAT+GGG | - | chr3.1:74931355-74931374 | MS.gene049424:intron | 15.0% |
| !!! | TTACTGAATCTTTTTTTTTT+GGG | - | chr3.1:74933882-74933901 | MS.gene049424:intron | 15.0% |
| !!! | TTTACTGAATCTTTTTTTTT+TGG | - | chr3.1:74933881-74933900 | MS.gene049424:intron | 15.0% |
| !! | AAACAGAACAATATATACAT+TGG | + | chr3.1:74930939-74930958 | None:intergenic | 20.0% |
| !! | AAATAAATGCACAAATTGTA+TGG | + | chr3.1:74932222-74932241 | None:intergenic | 20.0% |
| !! | AAATAGATATGTACTAAACA+TGG | - | chr3.1:74932464-74932483 | MS.gene049424:intron | 20.0% |
| !! | AATAAATGCACAAATTGTAT+GGG | + | chr3.1:74932221-74932240 | None:intergenic | 20.0% |
| !! | AATTTGATATACTGTATACT+TGG | - | chr3.1:74934274-74934293 | MS.gene049424:CDS | 20.0% |
| !! | ACATTCTATGATAATCAATT+CGG | - | chr3.1:74932003-74932022 | MS.gene049424:intron | 20.0% |
| !! | ATAATCAATTCGGAATTAAT+TGG | - | chr3.1:74932013-74932032 | MS.gene049424:intron | 20.0% |
| !! | ATTTGATATACTGTATACTT+GGG | - | chr3.1:74934275-74934294 | MS.gene049424:CDS | 20.0% |
| !! | TAAAATTCAATGTACATTCA+AGG | - | chr3.1:74933781-74933800 | MS.gene049424:CDS | 20.0% |
| !! | TAATCAATTCGGAATTAATT+GGG | - | chr3.1:74932014-74932033 | MS.gene049424:intron | 20.0% |
| !! | TCATTATATACCAAATATGT+AGG | + | chr3.1:74932855-74932874 | None:intergenic | 20.0% |
| !! | TCCCATATAAATAAAAGAAA+AGG | - | chr3.1:74933104-74933123 | MS.gene049424:intron | 20.0% |
| !! | TTAATGTAAATATGCAATGT+GGG | + | chr3.1:74933313-74933332 | None:intergenic | 20.0% |
| !!! | AGCCTTTTCTTTTATTTATA+TGG | + | chr3.1:74933109-74933128 | None:intergenic | 20.0% |
| !!! | AGTGATTTTAACAAACAAAA+AGG | + | chr3.1:74933553-74933572 | None:intergenic | 20.0% |
| !!! | CTCGTTAGTTTTTAAAATTT+TGG | - | chr3.1:74934192-74934211 | MS.gene049424:CDS | 20.0% |
| !!! | GCCTTTTCTTTTATTTATAT+GGG | + | chr3.1:74933108-74933127 | None:intergenic | 20.0% |
| !!! | GTAAAGTTATAGTTGTTTTA+TGG | - | chr3.1:74931354-74931373 | MS.gene049424:intron | 20.0% |
| ! | AAACAATTTCTTATTGTTGC+AGG | - | chr3.1:74934429-74934448 | MS.gene049424:CDS | 25.0% |
| ! | AAGACTACATTAGACAATAA+AGG | - | chr3.1:74932964-74932983 | MS.gene049424:CDS | 25.0% |
| ! | AGATACATAGCATAAAGTAA+CGG | + | chr3.1:74932710-74932729 | None:intergenic | 25.0% |
| ! | AGATACATTCACGTAAAAAT+GGG | - | chr3.1:74930677-74930696 | MS.gene049424:intron | 25.0% |
| ! | ATCAATGCTGAAAAATATAC+AGG | - | chr3.1:74932350-74932369 | MS.gene049424:intron | 25.0% |
| ! | CTTAATGTAAATATGCAATG+TGG | + | chr3.1:74933314-74933333 | None:intergenic | 25.0% |
| ! | GATTCTTGGATATGATTATT+GGG | + | chr3.1:74930271-74930290 | None:intergenic | 25.0% |
| ! | GTAGATATATATCACAACTT+TGG | + | chr3.1:74932827-74932846 | None:intergenic | 25.0% |
| ! | GTATATATTGTTCTGTTTGT+TGG | - | chr3.1:74930941-74930960 | MS.gene049424:intron | 25.0% |
| ! | GTTTCATTACATAACAGAAT+CGG | - | chr3.1:74930157-74930176 | MS.gene049424:CDS | 25.0% |
| ! | TAAAAACTAACGAGAATAGA+AGG | + | chr3.1:74934186-74934205 | None:intergenic | 25.0% |
| ! | TAGATACATTCACGTAAAAA+TGG | - | chr3.1:74930676-74930695 | MS.gene049424:intron | 25.0% |
| ! | TGATTCTTGGATATGATTAT+TGG | + | chr3.1:74930272-74930291 | None:intergenic | 25.0% |
| ! | TTAAAATTAGTGAGTGGTTA+GGG | - | chr3.1:74934015-74934034 | MS.gene049424:intron | 25.0% |
| ! | TTTACATTAAGAGAAATGCT+AGG | - | chr3.1:74933323-74933342 | MS.gene049424:intron | 25.0% |
| !! | AGTTCAATGTTCATTTTCTT+GGG | - | chr3.1:74933976-74933995 | MS.gene049424:intron | 25.0% |
| !! | GCTTAGCTAAAATGAATTTT+GGG | - | chr3.1:74931307-74931326 | MS.gene049424:intron | 25.0% |
| !! | TAGTTCAATGTTCATTTTCT+TGG | - | chr3.1:74933975-74933994 | MS.gene049424:intron | 25.0% |
| !! | TGTAACTGATGACATTATTT+TGG | + | chr3.1:74932174-74932193 | None:intergenic | 25.0% |
| !! | TTGTAGCTTCTTAATTTTCA+CGG | - | chr3.1:74931236-74931255 | MS.gene049424:intron | 25.0% |
| !! | TTTGTTTGTTAAAATCACTC+TGG | - | chr3.1:74933554-74933573 | MS.gene049424:intron | 25.0% |
| !!! | ACTTTTGTTTAAATACACAC+AGG | - | chr3.1:74931444-74931463 | MS.gene049424:intron | 25.0% |
| !!! | AGTTTTTTCAAGGTTAGTTA+GGG | + | chr3.1:74932594-74932613 | None:intergenic | 25.0% |
| !!! | CGTAAAAATGGGTTAAATAA+TGG | - | chr3.1:74930688-74930707 | MS.gene049424:intron | 25.0% |
| !!! | TAGTTTTTTCAAGGTTAGTT+AGG | + | chr3.1:74932595-74932614 | None:intergenic | 25.0% |
| AAATCGCTACAATACTCTAA+TGG | - | chr3.1:74933205-74933224 | MS.gene049424:intron | 30.0% | |
| AAATTAGGTTCCAAGATTCA+AGG | + | chr3.1:74933156-74933175 | None:intergenic | 30.0% | |
| AACTAAACTAGTGAGATCTT+TGG | - | chr3.1:74933250-74933269 | MS.gene049424:intron | 30.0% | |
| AAGAAACATACTGAATACCT+AGG | - | chr3.1:74933006-74933025 | MS.gene049424:CDS | 30.0% | |
| AATTCGGAATTAATTGGGAA+GGG | - | chr3.1:74932019-74932038 | MS.gene049424:intron | 30.0% | |
| ACTAAGAAATAACTGACCTA+TGG | - | chr3.1:74932794-74932813 | MS.gene049424:intron | 30.0% | |
| AGGATTTAGTCATATGTATG+AGG | + | chr3.1:74933136-74933155 | None:intergenic | 30.0% | |
| ATGACTAAATCCTTGAATCT+TGG | - | chr3.1:74933143-74933162 | MS.gene049424:intron | 30.0% | |
| CAAACACACACTAAATAAAC+GGG | + | chr3.1:74930575-74930594 | None:intergenic | 30.0% | |
| CCAAACACACACTAAATAAA+CGG | + | chr3.1:74930576-74930595 | None:intergenic | 30.0% | |
| CTAAGAAATAACTGACCTAT+GGG | - | chr3.1:74932795-74932814 | MS.gene049424:intron | 30.0% | |
| CTACTGTTGTAACTCTTTAA+AGG | - | chr3.1:74933832-74933851 | MS.gene049424:CDS | 30.0% | |
| CTTAACACTCATTCTCTTAT+TGG | + | chr3.1:74933453-74933472 | None:intergenic | 30.0% | |
| GAGCGAACATTCTAATAATT+GGG | - | chr3.1:74931801-74931820 | MS.gene049424:intron | 30.0% | |
| GCAAATCAACAATGACTAAA+AGG | + | chr3.1:74932256-74932275 | None:intergenic | 30.0% | |
| GTAAGAATGAGAAATGTGAA+CGG | + | chr3.1:74933692-74933711 | None:intergenic | 30.0% | |
| GTTAAAATTAGTGAGTGGTT+AGG | - | chr3.1:74934014-74934033 | MS.gene049424:intron | 30.0% | |
| GTTCACATTTCTCATTCTTA+CGG | - | chr3.1:74933691-74933710 | MS.gene049424:intron | 30.0% | |
| TATGTAATGAAACTGTGCAA+CGG | + | chr3.1:74930150-74930169 | None:intergenic | 30.0% | |
| TATTAGAACGGATAAGACAA+GGG | + | chr3.1:74933737-74933756 | None:intergenic | 30.0% | |
| TCATATTTACTAATGCCCAT+TGG | + | chr3.1:74934149-74934168 | None:intergenic | 30.0% | |
| TCTTAGTGATGAGATAGAAA+AGG | + | chr3.1:74932781-74932800 | None:intergenic | 30.0% | |
| TGATGAGAAATTGTCATATG+TGG | + | chr3.1:74932056-74932075 | None:intergenic | 30.0% | |
| TGTTATTATCTTGTCTTGCT+TGG | - | chr3.1:74931901-74931920 | MS.gene049424:intron | 30.0% | |
| TTAAGGTCAAAAGGCTTAAA+GGG | - | chr3.1:74931711-74931730 | MS.gene049424:intron | 30.0% | |
| TTATTAGAACGGATAAGACA+AGG | + | chr3.1:74933738-74933757 | None:intergenic | 30.0% | |
| TTATTGGATGAAATCCATGT+AGG | + | chr3.1:74933437-74933456 | None:intergenic | 30.0% | |
| TTGTAGCGATTTAATCACAA+TGG | + | chr3.1:74933197-74933216 | None:intergenic | 30.0% | |
| TTTCAGCTTCACTATCTTAA+AGG | + | chr3.1:74932669-74932688 | None:intergenic | 30.0% | |
| ! | AAAGATCTCACTAGTTTAGT+TGG | + | chr3.1:74933251-74933270 | None:intergenic | 30.0% |
| ! | AAGATCTCACTAGTTTAGTT+GGG | + | chr3.1:74933250-74933269 | None:intergenic | 30.0% |
| ! | ATATTGTTCTGTTTGTTGGT+GGG | - | chr3.1:74930945-74930964 | MS.gene049424:intron | 30.0% |
| ! | CGCTTAGCTAAAATGAATTT+TGG | - | chr3.1:74931306-74931325 | MS.gene049424:intron | 30.0% |
| ! | GTTCAATGTTCATTTTCTTG+GGG | - | chr3.1:74933977-74933996 | MS.gene049424:intron | 30.0% |
| ! | TATATTGTTCTGTTTGTTGG+TGG | - | chr3.1:74930944-74930963 | MS.gene049424:intron | 30.0% |
| ! | TGAGGACTAGTATTATACAA+TGG | - | chr3.1:74934403-74934422 | MS.gene049424:CDS | 30.0% |
| ! | TGTTTCTTGTTTGCATAATC+TGG | - | chr3.1:74931587-74931606 | MS.gene049424:intron | 30.0% |
| ! | TTTTCACGGTATAATCACAT+CGG | - | chr3.1:74931250-74931269 | MS.gene049424:intron | 30.0% |
| !! | GGATTTTACATTGCTTTTCA+GGG | + | chr3.1:74933087-74933106 | None:intergenic | 30.0% |
| !! | GTTATAGTTGTTTTATGGGT+AGG | - | chr3.1:74931359-74931378 | MS.gene049424:intron | 30.0% |
| !! | TCGCATTTTAATCTCTAACT+TGG | - | chr3.1:74931539-74931558 | MS.gene049424:intron | 30.0% |
| !! | TTAGTGCTGACTTAACTAAT+AGG | - | chr3.1:74933938-74933957 | MS.gene049424:intron | 30.0% |
| !! | TTTGTAGGTATTGCTAGTTT+TGG | - | chr3.1:74930994-74931013 | MS.gene049424:CDS | 30.0% |
| !!! | GATGACATTATTTTGGAAGT+GGG | + | chr3.1:74932167-74932186 | None:intergenic | 30.0% |
| !!! | GTTTGCATAATCTGGTTTTA+GGG | - | chr3.1:74931595-74931614 | MS.gene049424:intron | 30.0% |
| !!! | TGATGACATTATTTTGGAAG+TGG | + | chr3.1:74932168-74932187 | None:intergenic | 30.0% |
| !!! | TGTTTGCATAATCTGGTTTT+AGG | - | chr3.1:74931594-74931613 | MS.gene049424:intron | 30.0% |
| !!! | TTGTAGGTATTGCTAGTTTT+GGG | - | chr3.1:74930995-74931014 | MS.gene049424:CDS | 30.0% |
| !!! | TTTGCATAATCTGGTTTTAG+GGG | - | chr3.1:74931596-74931615 | MS.gene049424:intron | 30.0% |
| AAAATGGATCCCACATAAAG+TGG | + | chr3.1:74933402-74933421 | None:intergenic | 35.0% | |
| AAACATACTGAATACCTAGG+TGG | - | chr3.1:74933009-74933028 | MS.gene049424:CDS | 35.0% | |
| AAATCTAGCAAACTGTGAAG+CGG | + | chr3.1:74932565-74932584 | None:intergenic | 35.0% | |
| AAATCTGATCCAGGAATGAA+TGG | + | chr3.1:74930410-74930429 | None:intergenic | 35.0% | |
| AACATACTGAATACCTAGGT+GGG | - | chr3.1:74933010-74933029 | MS.gene049424:CDS | 35.0% | |
| AAGAGTTCCTTAAGGTCAAA+AGG | - | chr3.1:74931702-74931721 | MS.gene049424:intron | 35.0% | |
| AATGTTACCAATTTCCGTGT+TGG | - | chr3.1:74930458-74930477 | MS.gene049424:intron | 35.0% | |
| ACAGTACATGGACTTTATTG+GGG | - | chr3.1:74933586-74933605 | MS.gene049424:CDS | 35.0% | |
| ACCAGGTTAAAATTAGTGAG+TGG | - | chr3.1:74934009-74934028 | MS.gene049424:intron | 35.0% | |
| ACTTGGGTCATTATAACAGT+TGG | - | chr3.1:74934291-74934310 | MS.gene049424:CDS | 35.0% | |
| AGAAAAGGACTACATCATAC+TGG | + | chr3.1:74932766-74932785 | None:intergenic | 35.0% | |
| AGATCAAGCAACAAACAATC+AGG | + | chr3.1:74931945-74931964 | None:intergenic | 35.0% | |
| AGCTCATGAAAGAATCTTTG+CGG | - | chr3.1:74931765-74931784 | MS.gene049424:intron | 35.0% | |
| AGGCAAATGATACAAACTAC+TGG | + | chr3.1:74934362-74934381 | None:intergenic | 35.0% | |
| AGTAACGGTAGTATTTAAGC+AGG | + | chr3.1:74932695-74932714 | None:intergenic | 35.0% | |
| AGTATGTTTCTTAGATGTCG+TGG | + | chr3.1:74932998-74933017 | None:intergenic | 35.0% | |
| ATCAGAGATAGGAAAGCTAT+AGG | - | chr3.1:74934472-74934491 | MS.gene049424:CDS | 35.0% | |
| ATGTAGGAGAATCCAATTGA+GGG | + | chr3.1:74930301-74930320 | None:intergenic | 35.0% | |
| ATTAGCGAAATTCAAGCTTG+TGG | + | chr3.1:74930345-74930364 | None:intergenic | 35.0% | |
| ATTCGGAATTAATTGGGAAG+GGG | - | chr3.1:74932020-74932039 | MS.gene049424:intron | 35.0% | |
| CAAAAGCAACAGTCATGATA+TGG | + | chr3.1:74932121-74932140 | None:intergenic | 35.0% | |
| CAATTCGGAATTAATTGGGA+AGG | - | chr3.1:74932018-74932037 | MS.gene049424:intron | 35.0% | |
| CATGTTGCAATAATACATGC+AGG | + | chr3.1:74932622-74932641 | None:intergenic | 35.0% | |
| CCGTTTATTTAGTGTGTGTT+TGG | - | chr3.1:74930573-74930592 | MS.gene049424:intron | 35.0% | |
| CTAATAATTGGGTTTGCAAG+TGG | - | chr3.1:74931812-74931831 | MS.gene049424:intron | 35.0% | |
| CTTAAGGTCAAAAGGCTTAA+AGG | - | chr3.1:74931710-74931729 | MS.gene049424:intron | 35.0% | |
| GAACTAACATAAGAGAGCTT+TGG | + | chr3.1:74933497-74933516 | None:intergenic | 35.0% | |
| GACAGTACATGGACTTTATT+GGG | - | chr3.1:74933585-74933604 | MS.gene049424:CDS | 35.0% | |
| GCTAATTACTTGCAGATTCT+TGG | - | chr3.1:74930359-74930378 | MS.gene049424:intron | 35.0% | |
| GGAGCGAACATTCTAATAAT+TGG | - | chr3.1:74931800-74931819 | MS.gene049424:intron | 35.0% | |
| GGATAAATCAGCATGTTTAC+TGG | - | chr3.1:74933903-74933922 | MS.gene049424:intron | 35.0% | |
| TAAAATCACTCTGGCAGAAT+TGG | - | chr3.1:74933563-74933582 | MS.gene049424:intron | 35.0% | |
| TAAATATGCAATGTGGGCAA+GGG | + | chr3.1:74933307-74933326 | None:intergenic | 35.0% | |
| TAACAAGAGCTATGTTAGCA+GGG | + | chr3.1:74931853-74931872 | None:intergenic | 35.0% | |
| TAGGTCTCACACTTAGAAAA+TGG | + | chr3.1:74933418-74933437 | None:intergenic | 35.0% | |
| TAGTCCTCATTGAACATCAA+TGG | + | chr3.1:74934392-74934411 | None:intergenic | 35.0% | |
| TATAGCTTTCCTATCTCTGA+TGG | + | chr3.1:74934473-74934492 | None:intergenic | 35.0% | |
| TCAATTGGATTCTCCTACAT+CGG | - | chr3.1:74930301-74930320 | MS.gene049424:intron | 35.0% | |
| TCAGAGATAGGAAAGCTATA+GGG | - | chr3.1:74934473-74934492 | MS.gene049424:CDS | 35.0% | |
| TCTACACACACCTACATATT+TGG | - | chr3.1:74932842-74932861 | MS.gene049424:CDS | 35.0% | |
| TGAACATCAATGGAGCATAT+AGG | + | chr3.1:74934382-74934401 | None:intergenic | 35.0% | |
| TGCTAACATAGCTCTTGTTA+AGG | - | chr3.1:74931853-74931872 | MS.gene049424:intron | 35.0% | |
| TGTTCTTGAAGATTCTCTCA+AGG | - | chr3.1:74933633-74933652 | MS.gene049424:CDS | 35.0% | |
| TTAACAAGAGCTATGTTAGC+AGG | + | chr3.1:74931854-74931873 | None:intergenic | 35.0% | |
| TTATTGAGTGAATCCCATGT+GGG | - | chr3.1:74933371-74933390 | MS.gene049424:intron | 35.0% | |
| TTGTGACATCAATGACCAAT+GGG | - | chr3.1:74934131-74934150 | MS.gene049424:CDS | 35.0% | |
| ! | AACACGGAAATTGGTAACAT+TGG | + | chr3.1:74930459-74930478 | None:intergenic | 35.0% |
| ! | AGCACTTTTGTGCAGAAAAT+TGG | - | chr3.1:74930211-74930230 | MS.gene049424:intron | 35.0% |
| ! | ATTCCTGGATCAGATTTTTC+AGG | - | chr3.1:74930413-74930432 | MS.gene049424:intron | 35.0% |
| ! | ATTGGTAACATTGGAACCAA+CGG | + | chr3.1:74930450-74930469 | None:intergenic | 35.0% |
| ! | CATCATACTGGCATTTTGTT+TGG | + | chr3.1:74932754-74932773 | None:intergenic | 35.0% |
| ! | CTTTAAGCCTTTTGACCTTA+AGG | + | chr3.1:74931712-74931731 | None:intergenic | 35.0% |
| ! | GCACTTTTGTGCAGAAAATT+GGG | - | chr3.1:74930212-74930231 | MS.gene049424:intron | 35.0% |
| ! | GGTACATCAGGAATAGATTT+TGG | - | chr3.1:74931874-74931893 | MS.gene049424:intron | 35.0% |
| ! | TATTGTTCTGTTTGTTGGTG+GGG | - | chr3.1:74930946-74930965 | MS.gene049424:intron | 35.0% |
| ! | TGCAAATTGGAAAAGCATGT+GGG | - | chr3.1:74931047-74931066 | MS.gene049424:CDS | 35.0% |
| ! | TTGGATCTGCAAACTTTTGT+TGG | - | chr3.1:74933269-74933288 | MS.gene049424:intron | 35.0% |
| !! | ACCACTCACTAATTTTAACC+TGG | + | chr3.1:74934013-74934032 | None:intergenic | 35.0% |
| !! | GGGATTTTACATTGCTTTTC+AGG | + | chr3.1:74933088-74933107 | None:intergenic | 35.0% |
| !! | TATGTTAGTTCTGCTATAGC+TGG | - | chr3.1:74933506-74933525 | MS.gene049424:intron | 35.0% |
| !!! | CATTGATTTTCACTTGACAG+TGG | + | chr3.1:74932337-74932356 | None:intergenic | 35.0% |
| !!! | CTGGGGAATTTTTAGTTATC+TGG | - | chr3.1:74932900-74932919 | MS.gene049424:CDS | 35.0% |
| !!! | CTTCACAGTTTGCTAGATTT+TGG | - | chr3.1:74932565-74932584 | MS.gene049424:intron | 35.0% |
| !!! | GGAATTTTTAGTTATCTGGC+TGG | - | chr3.1:74932904-74932923 | MS.gene049424:CDS | 35.0% |
| AAATTAGTGAGTGGTTAGGG+TGG | - | chr3.1:74934018-74934037 | MS.gene049424:intron | 40.0% | |
| AACAAACAGGATCACCAACA+CGG | + | chr3.1:74930475-74930494 | None:intergenic | 40.0% | |
| AACATAGGCTAAGAAGCTCA+TGG | + | chr3.1:74931175-74931194 | None:intergenic | 40.0% | |
| AATTAGTGAGTGGTTAGGGT+GGG | - | chr3.1:74934019-74934038 | MS.gene049424:intron | 40.0% | |
| ACATAGGCTAAGAAGCTCAT+GGG | + | chr3.1:74931174-74931193 | None:intergenic | 40.0% | |
| ACTCAACTCCAACTTTCCAA+GGG | + | chr3.1:74931568-74931587 | None:intergenic | 40.0% | |
| AGAGAATCTTCAAGAACAGC+TGG | + | chr3.1:74933631-74933650 | None:intergenic | 40.0% | |
| AGATAGGAAAGCTATAGGGA+AGG | - | chr3.1:74934477-74934496 | MS.gene049424:CDS | 40.0% | |
| AGCTCTTGTTAAGGTACATC+AGG | - | chr3.1:74931862-74931881 | MS.gene049424:intron | 40.0% | |
| ATAAGATCCAAGAGCAGCAA+AGG | + | chr3.1:74930498-74930517 | None:intergenic | 40.0% | |
| ATCCTAACTCTAACCGATGT+AGG | + | chr3.1:74930317-74930336 | None:intergenic | 40.0% | |
| ATCTCTAACTTGGTATCCCT+TGG | - | chr3.1:74931549-74931568 | MS.gene049424:intron | 40.0% | |
| ATGCCATTATGCCTTTGAGT+TGG | - | chr3.1:74931123-74931142 | MS.gene049424:intron | 40.0% | |
| ATGCCTGAAAAATCTGATCC+AGG | + | chr3.1:74930419-74930438 | None:intergenic | 40.0% | |
| CACACTAAATAAACGGGAAG+AGG | + | chr3.1:74930569-74930588 | None:intergenic | 40.0% | |
| CATAGAGCTCAGTTGAAATC+TGG | - | chr3.1:74930872-74930891 | MS.gene049424:intron | 40.0% | |
| CCAAAATGAACCCAACTCAA+AGG | + | chr3.1:74931137-74931156 | None:intergenic | 40.0% | |
| CTTATTGAGTGAATCCCATG+TGG | - | chr3.1:74933370-74933389 | MS.gene049424:intron | 40.0% | |
| GAACAAAACGTGCGTTGAAA+TGG | - | chr3.1:74930187-74930206 | MS.gene049424:CDS | 40.0% | |
| GAGAATCCAATTGAGGGATA+GGG | + | chr3.1:74930295-74930314 | None:intergenic | 40.0% | |
| GAGAATCTTCAAGAACAGCT+GGG | + | chr3.1:74933630-74933649 | None:intergenic | 40.0% | |
| GAGTGTGAAAGAGTTCCTTA+AGG | - | chr3.1:74931694-74931713 | MS.gene049424:intron | 40.0% | |
| GATGTAGGAGAATCCAATTG+AGG | + | chr3.1:74930302-74930321 | None:intergenic | 40.0% | |
| GGACAGTACATGGACTTTAT+TGG | - | chr3.1:74933584-74933603 | MS.gene049424:CDS | 40.0% | |
| GTAAATATGCAATGTGGGCA+AGG | + | chr3.1:74933308-74933327 | None:intergenic | 40.0% | |
| GTGCAGCTCTTGAAATCAAT+GGG | - | chr3.1:74931629-74931648 | MS.gene049424:intron | 40.0% | |
| TGCTCCATTGATGTTCAATG+AGG | - | chr3.1:74934385-74934404 | MS.gene049424:CDS | 40.0% | |
| TGGGTTGTGGAATTGTTTGT+AGG | - | chr3.1:74930979-74930998 | MS.gene049424:CDS | 40.0% | |
| TTCTAAGTGTGAGACCTACA+TGG | - | chr3.1:74933420-74933439 | MS.gene049424:intron | 40.0% | |
| TTGGTGGGGTTAAGTTATGT+GGG | - | chr3.1:74930960-74930979 | MS.gene049424:CDS | 40.0% | |
| ! | AACCCAACTCAAAGGCATAA+TGG | + | chr3.1:74931129-74931148 | None:intergenic | 40.0% |
| ! | AATCTTTGCGGCTTCTGAAA+TGG | - | chr3.1:74931777-74931796 | MS.gene049424:intron | 40.0% |
| ! | ATAAACGGGAAGAGGAGTAT+CGG | + | chr3.1:74930561-74930580 | None:intergenic | 40.0% |
| ! | ATGGGAAGAGAATTTTGAGC+AGG | - | chr3.1:74932406-74932425 | MS.gene049424:intron | 40.0% |
| ! | CTATTGTCATTGCTGTTGCT+AGG | - | chr3.1:74931071-74931090 | MS.gene049424:CDS | 40.0% |
| ! | GCAAATTGGAAAAGCATGTG+GGG | - | chr3.1:74931048-74931067 | MS.gene049424:CDS | 40.0% |
| ! | GTGCAAATTGGAAAAGCATG+TGG | - | chr3.1:74931046-74931065 | MS.gene049424:CDS | 40.0% |
| ! | TGCCATTATGCCTTTGAGTT+GGG | - | chr3.1:74931124-74931143 | MS.gene049424:intron | 40.0% |
| !! | ATCAATGGGTGTTGATCATG+TGG | - | chr3.1:74931643-74931662 | MS.gene049424:intron | 40.0% |
| !! | ATCTTTGCGGCTTCTGAAAT+GGG | - | chr3.1:74931778-74931797 | MS.gene049424:intron | 40.0% |
| !! | CAACTTTGGAATAGACCCAT+AGG | + | chr3.1:74932813-74932832 | None:intergenic | 40.0% |
| !! | CATTGTTGATTTGCTGACGA+GGG | - | chr3.1:74932262-74932281 | MS.gene049424:intron | 40.0% |
| !! | TAATTGGGAAGGGGTATCAA+GGG | - | chr3.1:74932029-74932048 | MS.gene049424:intron | 40.0% |
| !! | TCATTGTTGATTTGCTGACG+AGG | - | chr3.1:74932261-74932280 | MS.gene049424:intron | 40.0% |
| !! | TTAATTGGGAAGGGGTATCA+AGG | - | chr3.1:74932028-74932047 | MS.gene049424:intron | 40.0% |
| !! | TTAGTGTGTGTTTGGTTCTG+TGG | - | chr3.1:74930581-74930600 | MS.gene049424:intron | 40.0% |
| !!! | CCTTTGAGTTGGGTTCATTT+TGG | - | chr3.1:74931134-74931153 | MS.gene049424:intron | 40.0% |
| !!! | CTGGCATTTTGTTTGGCTTT+TGG | + | chr3.1:74932747-74932766 | None:intergenic | 40.0% |
| !!! | GCAGGCTGTTAGTTTTTTCA+AGG | + | chr3.1:74932604-74932623 | None:intergenic | 40.0% |
| !!! | TGACTGTTGCTTTTGCTGTT+CGG | - | chr3.1:74932126-74932145 | MS.gene049424:intron | 40.0% |
| AATTTGTAGGTTTCGCGTGC+CGG | - | chr3.1:74930781-74930800 | MS.gene049424:intron | 45.0% | |
| ACTGAATACCTAGGTGGGTA+AGG | - | chr3.1:74933015-74933034 | MS.gene049424:CDS | 45.0% | |
| AGAGCAGCAAAGGAACAAAC+AGG | + | chr3.1:74930488-74930507 | None:intergenic | 45.0% | |
| AGCAGTTGCTAAATGTGCTG+CGG | + | chr3.1:74931211-74931230 | None:intergenic | 45.0% | |
| AGCTCAGTTGAAATCTGGTC+AGG | - | chr3.1:74930877-74930896 | MS.gene049424:intron | 45.0% | |
| AGGATCACCAACACGGAAAT+TGG | + | chr3.1:74930468-74930487 | None:intergenic | 45.0% | |
| AGTTACATGCACCCGTAGTA+GGG | - | chr3.1:74932187-74932206 | MS.gene049424:intron | 45.0% | |
| ATAAAGTGGTGAGACCCACA+TGG | + | chr3.1:74933388-74933407 | None:intergenic | 45.0% | |
| ATGAAACTGAGAGCTGAGAC+TGG | - | chr3.1:74932881-74932900 | MS.gene049424:CDS | 45.0% | |
| CACTCAACTCCAACTTTCCA+AGG | + | chr3.1:74931569-74931588 | None:intergenic | 45.0% | |
| CAGAAAATTGGGTGACCCAA+CGG | - | chr3.1:74930223-74930242 | MS.gene049424:intron | 45.0% | |
| CTACTGTCTTGGTTGGCAAA+AGG | - | chr3.1:74933658-74933677 | MS.gene049424:intron | 45.0% | |
| CTTGGTATCCCTTGGAAAGT+TGG | - | chr3.1:74931557-74931576 | MS.gene049424:intron | 45.0% | |
| GAATCACCCTATCCCTCAAT+TGG | - | chr3.1:74930286-74930305 | MS.gene049424:intron | 45.0% | |
| GATCCAGGAATGAATGGCAA+AGG | + | chr3.1:74930404-74930423 | None:intergenic | 45.0% | |
| GCATTTGGCACTTCACATGT+TGG | - | chr3.1:74930842-74930861 | MS.gene049424:intron | 45.0% | |
| GGAGAATCCAATTGAGGGAT+AGG | + | chr3.1:74930296-74930315 | None:intergenic | 45.0% | |
| GGCAACGTGAATGCAAACAT+AGG | + | chr3.1:74931190-74931209 | None:intergenic | 45.0% | |
| GGTGCAGCTCTTGAAATCAA+TGG | - | chr3.1:74931628-74931647 | MS.gene049424:intron | 45.0% | |
| GTCAGCACTAAACCTGAACA+AGG | + | chr3.1:74933929-74933948 | None:intergenic | 45.0% | |
| GTTTGTTCCTTTGCTGCTCT+TGG | - | chr3.1:74930488-74930507 | MS.gene049424:intron | 45.0% | |
| TAAAGTGGTGAGACCCACAT+GGG | + | chr3.1:74933387-74933406 | None:intergenic | 45.0% | |
| TCTTGGGGTTCTATTTGACC+AGG | - | chr3.1:74933992-74934011 | MS.gene049424:intron | 45.0% | |
| TGAAACTGAGAGCTGAGACT+GGG | - | chr3.1:74932882-74932901 | MS.gene049424:CDS | 45.0% | |
| TGGCAGAATTGGACAGTACA+TGG | - | chr3.1:74933574-74933593 | MS.gene049424:intron | 45.0% | |
| TGGGTCTCACCACTTTATGT+GGG | - | chr3.1:74933390-74933409 | MS.gene049424:intron | 45.0% | |
| TTGAGGGATAGGGTGATTCT+TGG | + | chr3.1:74930285-74930304 | None:intergenic | 45.0% | |
| ! | CTCCTACATCGGTTAGAGTT+AGG | - | chr3.1:74930312-74930331 | MS.gene049424:intron | 45.0% |
| ! | GGGTTAAGTTATGTGGGTTG+TGG | - | chr3.1:74930966-74930985 | MS.gene049424:CDS | 45.0% |
| ! | GTTGGTGGGGTTAAGTTATG+TGG | - | chr3.1:74930959-74930978 | MS.gene049424:CDS | 45.0% |
| !! | AATGGGTGTTGATCATGTGG+TGG | - | chr3.1:74931646-74931665 | MS.gene049424:intron | 45.0% |
| !! | CATGTTTACTGGCCTTGTTC+AGG | - | chr3.1:74933914-74933933 | MS.gene049424:intron | 45.0% |
| !! | GCAGATTCTTGGAAAGTACC+AGG | - | chr3.1:74930370-74930389 | MS.gene049424:intron | 45.0% |
| !! | GTTGATCATGTGGTGGACTT+GGG | - | chr3.1:74931653-74931672 | MS.gene049424:intron | 45.0% |
| !! | TCTTTGCGGCTTCTGAAATG+GGG | - | chr3.1:74931779-74931798 | MS.gene049424:intron | 45.0% |
| !! | TGTTGATCATGTGGTGGACT+TGG | - | chr3.1:74931652-74931671 | MS.gene049424:intron | 45.0% |
| !!! | TGGTTTTAGGGGAGCTGAAA+AGG | - | chr3.1:74931607-74931626 | MS.gene049424:intron | 45.0% |
| !! | AAATTTAAACTAAAAAAATA+GGG | + | chr3.1:74934259-74934278 | None:intergenic | 5.0% |
| AGTGGTTAGGGTGGGAAAGT+TGG | - | chr3.1:74934027-74934046 | MS.gene049424:intron | 50.0% | |
| ATGGCAAAGGAGGTTTCTCC+TGG | + | chr3.1:74930391-74930410 | None:intergenic | 50.0% | |
| CAAGGAGCTACTGTCTTGGT+TGG | - | chr3.1:74933651-74933670 | MS.gene049424:CDS | 50.0% | |
| CAGTTACATGCACCCGTAGT+AGG | - | chr3.1:74932186-74932205 | MS.gene049424:intron | 50.0% | |
| CCAGGAATGAATGGCAAAGG+AGG | + | chr3.1:74930401-74930420 | None:intergenic | 50.0% | |
| CCTATCTCTGATGGCAGTGA+AGG | + | chr3.1:74934464-74934483 | None:intergenic | 50.0% | |
| CCTCCTTTGCCATTCATTCC+TGG | - | chr3.1:74930398-74930417 | MS.gene049424:intron | 50.0% | |
| CCTTCACTGCCATCAGAGAT+AGG | - | chr3.1:74934461-74934480 | MS.gene049424:CDS | 50.0% | |
| CTCTCAAGGAGCTACTGTCT+TGG | - | chr3.1:74933647-74933666 | MS.gene049424:CDS | 50.0% | |
| GAAACTGAGAGCTGAGACTG+GGG | - | chr3.1:74932883-74932902 | MS.gene049424:CDS | 50.0% | |
| GATGTCCTGTATGACCCAGT+AGG | - | chr3.1:74931737-74931756 | MS.gene049424:intron | 50.0% | |
| GCAACCAAATCACAACCCTC+CGG | + | chr3.1:74930803-74930822 | None:intergenic | 50.0% | |
| GCTATGTTAGCAGGGATGAC+AGG | + | chr3.1:74931845-74931864 | None:intergenic | 50.0% | |
| GGTCTTGCAGCTGTGCAAAT+TGG | - | chr3.1:74931034-74931053 | MS.gene049424:CDS | 50.0% | |
| GTGGGTCTCACCACTTTATG+TGG | - | chr3.1:74933389-74933408 | MS.gene049424:intron | 50.0% | |
| TCATGAGCTTGCCTCCTACT+GGG | + | chr3.1:74931754-74931773 | None:intergenic | 50.0% | |
| TCATTCTTACGGCCTGTCAG+AGG | - | chr3.1:74933702-74933721 | MS.gene049424:intron | 50.0% | |
| TGAGAGAACCTTACCCACCT+AGG | + | chr3.1:74933026-74933045 | None:intergenic | 50.0% | |
| TTCATGAGCTTGCCTCCTAC+TGG | + | chr3.1:74931755-74931774 | None:intergenic | 50.0% | |
| ! | GGGATTTTCTGACCTCTGAC+AGG | + | chr3.1:74933717-74933736 | None:intergenic | 50.0% |
| !! | GGTTGTGATTTGGTTGCTGC+TGG | - | chr3.1:74930806-74930825 | MS.gene049424:intron | 50.0% |
| !! | TCAGGCATCGTTGATTCCGT+TGG | - | chr3.1:74930431-74930450 | MS.gene049424:intron | 50.0% |
| !!! | TTGCTAGTTTTGGGTGCAGC+AGG | - | chr3.1:74931004-74931023 | MS.gene049424:CDS | 50.0% |
| CGTCTTCAACGCTCACCGTT+GGG | + | chr3.1:74930241-74930260 | None:intergenic | 55.0% | |
| GTCCTGTATGACCCAGTAGG+AGG | - | chr3.1:74931740-74931759 | MS.gene049424:intron | 55.0% | |
| TCGTCTTCAACGCTCACCGT+TGG | + | chr3.1:74930242-74930261 | None:intergenic | 55.0% | |
| TGCCTCCTACTGGGTCATAC+AGG | + | chr3.1:74931745-74931764 | None:intergenic | 55.0% | |
| TGGGTCTGCTAGCCCTACTA+CGG | + | chr3.1:74932202-74932221 | None:intergenic | 55.0% | |
| !! | GGAGCACTTGCTGTGGCATT+TGG | - | chr3.1:74930827-74930846 | MS.gene049424:intron | 55.0% |
| !!! | CTAGTTTTGGGTGCAGCAGG+AGG | - | chr3.1:74931007-74931026 | MS.gene049424:CDS | 55.0% |
| CGTGCCGGAGGGTTGTGATT+TGG | - | chr3.1:74930796-74930815 | MS.gene049424:intron | 60.0% | |
| CTCTGATGGCAGTGAAGGCG+AGG | + | chr3.1:74934459-74934478 | None:intergenic | 60.0% | |
| GATGGCAGTGAAGGCGAGGT+TGG | + | chr3.1:74934455-74934474 | None:intergenic | 60.0% | |
| GGGTCTGCTAGCCCTACTAC+GGG | + | chr3.1:74932201-74932220 | None:intergenic | 60.0% | |
| TGTAGGTTTCGCGTGCCGGA+GGG | - | chr3.1:74930785-74930804 | MS.gene049424:intron | 60.0% | |
| TTGTAGGTTTCGCGTGCCGG+AGG | - | chr3.1:74930784-74930803 | MS.gene049424:intron | 60.0% | |
| TTTGGGTGCAGCAGGAGGTG+TGG | - | chr3.1:74931012-74931031 | MS.gene049424:CDS | 60.0% | |
| ! | TGCTGCTGGAGCACTTGCTG+TGG | - | chr3.1:74930820-74930839 | MS.gene049424:intron | 60.0% |
| ! | TTGGGTGCAGCAGGAGGTGT+GGG | - | chr3.1:74931013-74931032 | MS.gene049424:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 74930131 | 74934543 | 74930131 | ID=MS.gene049424 |
| chr3.1 | mRNA | 74930131 | 74934543 | 74930131 | ID=MS.gene049424.t1;Parent=MS.gene049424 |
| chr3.1 | exon | 74934125 | 74934543 | 74934125 | ID=MS.gene049424.t1.exon1;Parent=MS.gene049424.t1 |
| chr3.1 | CDS | 74934125 | 74934543 | 74934125 | ID=cds.MS.gene049424.t1;Parent=MS.gene049424.t1 |
| chr3.1 | exon | 74933776 | 74933884 | 74933776 | ID=MS.gene049424.t1.exon2;Parent=MS.gene049424.t1 |
| chr3.1 | CDS | 74933776 | 74933884 | 74933776 | ID=cds.MS.gene049424.t1;Parent=MS.gene049424.t1 |
| chr3.1 | exon | 74933582 | 74933673 | 74933582 | ID=MS.gene049424.t1.exon3;Parent=MS.gene049424.t1 |
| chr3.1 | CDS | 74933582 | 74933673 | 74933582 | ID=cds.MS.gene049424.t1;Parent=MS.gene049424.t1 |
| chr3.1 | exon | 74932800 | 74933058 | 74932800 | ID=MS.gene049424.t1.exon4;Parent=MS.gene049424.t1 |
| chr3.1 | CDS | 74932800 | 74933058 | 74932800 | ID=cds.MS.gene049424.t1;Parent=MS.gene049424.t1 |
| chr3.1 | exon | 74930951 | 74931094 | 74930951 | ID=MS.gene049424.t1.exon5;Parent=MS.gene049424.t1 |
| chr3.1 | CDS | 74930951 | 74931094 | 74930951 | ID=cds.MS.gene049424.t1;Parent=MS.gene049424.t1 |
| chr3.1 | exon | 74930131 | 74930223 | 74930131 | ID=MS.gene049424.t1.exon6;Parent=MS.gene049424.t1 |
| chr3.1 | CDS | 74930131 | 74930223 | 74930131 | ID=cds.MS.gene049424.t1;Parent=MS.gene049424.t1 |
| Gene Sequence |
| Protein sequence |
