AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94144

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94144.t1 MTR_2g097020 78.782 509 90 4 9 502 1 506 0.0 758
MS.gene94144.t1 MTR_2g097020 92.208 77 6 0 501 577 591 667 1.32e-39 154
MS.gene94144.t1 MTR_2g095400 76.493 519 69 5 9 502 1 491 0.0 719
MS.gene94144.t1 MTR_2g095400 68.831 77 9 2 501 577 576 637 7.89e-23 103
MS.gene94144.t1 MTR_4g046643 74.038 520 97 3 9 500 1 510 0.0 716
MS.gene94144.t1 MTR_4g046643 91.667 60 5 0 501 560 594 653 2.17e-27 117
MS.gene94144.t1 MTR_2g097010 71.676 519 120 4 9 502 1 517 0.0 647
MS.gene94144.t1 MTR_2g097010 90.909 77 7 0 501 577 602 678 1.70e-38 150
MS.gene94144.t1 MTR_3g067815 30.303 660 319 16 18 572 13 636 3.40e-83 273
MS.gene94144.t1 MTR_5g079940 30.108 651 328 17 29 575 492 1119 9.30e-73 253
MS.gene94144.t1 MTR_4g131350 32.039 515 261 16 29 505 77 540 2.26e-58 207
MS.gene94144.t1 MTR_2g097000 57.205 229 57 5 313 502 2 228 1.03e-56 196
MS.gene94144.t1 MTR_2g097000 90.909 77 7 0 501 577 313 389 2.20e-40 151
MS.gene94144.t1 MTR_4g125920 31.262 515 265 15 29 505 24 487 2.38e-55 197
MS.gene94144.t1 MTR_4g006760 29.580 524 279 13 29 518 24 491 1.13e-54 196
MS.gene94144.t1 MTR_4g131310 26.944 553 266 12 29 565 24 454 7.35e-46 168
MS.gene94144.t1 MTR_4g126200 85.714 77 11 0 501 577 177 253 1.27e-37 140
MS.gene94144.t1 MTR_8g446460 54.745 137 55 4 17 150 107 239 4.06e-35 135
MS.gene94144.t1 MTR_4g126180 70.213 94 28 0 314 407 3 96 3.93e-33 123
MS.gene94144.t1 MTR_2g066850 59.770 87 30 3 8 92 64 147 2.32e-21 99.4
MS.gene94144.t1 MTR_2g075630 67.164 67 19 2 8 74 65 128 1.23e-20 92.4
MS.gene94144.t1 MTR_3g067855 54.054 74 33 1 502 575 265 337 8.67e-18 85.9
MS.gene94144.t1 MTR_3g067825 48.315 89 44 2 487 575 16 102 4.25e-17 77.8
MS.gene94144.t1 MTR_8g063010 55.000 80 31 3 25 104 56 130 7.53e-16 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94144.t1 AT1G13790 37.119 590 256 15 20 502 9 590 1.70e-94 305
MS.gene94144.t1 AT1G13790 59.155 71 29 0 498 568 656 726 1.17e-18 90.5
MS.gene94144.t1 AT1G13790 37.119 590 256 15 20 502 9 590 1.70e-94 305
MS.gene94144.t1 AT1G13790 59.155 71 29 0 498 568 656 726 1.17e-18 90.5
MS.gene94144.t1 AT3G48670 31.590 497 269 10 40 500 38 499 7.83e-61 213
MS.gene94144.t1 AT3G48670 53.333 75 35 0 501 575 570 644 2.62e-17 85.9
MS.gene94144.t1 AT3G48670 31.590 497 269 10 40 500 38 499 7.83e-61 213
MS.gene94144.t1 AT3G48670 53.333 75 35 0 501 575 570 644 2.62e-17 85.9
MS.gene94144.t1 AT3G48670 31.590 497 269 10 40 500 38 499 7.83e-61 213
MS.gene94144.t1 AT3G48670 53.333 75 35 0 501 575 570 644 2.62e-17 85.9
MS.gene94144.t1 AT3G12550 30.344 524 287 12 24 504 8 496 6.16e-56 198
MS.gene94144.t1 AT4G01180 35.279 394 211 10 138 499 11 392 1.08e-55 197
MS.gene94144.t1 AT3G12550 30.344 524 287 12 24 504 8 496 1.71e-55 198
MS.gene94144.t1 AT3G12550 30.344 524 287 12 24 504 8 496 1.81e-55 198
MS.gene94144.t1 AT3G12550 30.344 524 287 12 24 504 8 496 1.81e-55 198
MS.gene94144.t1 AT3G12550 30.344 524 287 12 24 504 8 496 1.81e-55 198
MS.gene94144.t1 AT5G59390 33.890 419 220 12 156 542 34 427 1.25e-52 189
MS.gene94144.t1 AT5G59390 44.615 65 36 0 502 566 475 539 2.36e-11 67.0
MS.gene94144.t1 AT5G59390 33.890 419 220 12 156 542 34 427 1.25e-52 189
MS.gene94144.t1 AT5G59390 44.615 65 36 0 502 566 475 539 2.36e-11 67.0
MS.gene94144.t1 AT5G59390 33.890 419 220 12 156 542 34 427 1.25e-52 189
MS.gene94144.t1 AT5G59390 44.615 65 36 0 502 566 475 539 2.36e-11 67.0
MS.gene94144.t1 AT5G59390 33.491 424 220 13 156 542 34 432 2.42e-50 182
MS.gene94144.t1 AT5G59390 44.615 65 36 0 502 566 480 544 2.57e-11 66.6
MS.gene94144.t1 AT5G59390 33.491 424 220 13 156 542 34 432 2.42e-50 182
MS.gene94144.t1 AT5G59390 44.615 65 36 0 502 566 480 544 2.57e-11 66.6
MS.gene94144.t1 AT1G80790 29.515 515 283 10 23 502 19 488 9.00e-49 179
MS.gene94144.t1 AT1G80790 53.731 67 31 0 510 576 568 634 1.98e-16 83.2
MS.gene94144.t1 AT1G80790 29.515 515 283 10 23 502 19 488 9.00e-49 179
MS.gene94144.t1 AT1G80790 53.731 67 31 0 510 576 568 634 1.98e-16 83.2
MS.gene94144.t1 AT1G15910 27.519 516 289 12 24 500 18 487 1.37e-45 171
MS.gene94144.t1 AT1G15910 59.211 76 31 0 501 576 559 634 5.18e-19 91.3
MS.gene94144.t1 AT1G80790 27.790 457 250 10 23 444 19 430 8.74e-43 160
MS.gene94144.t1 AT4G00380 26.306 517 296 11 23 500 18 488 2.11e-40 155
MS.gene94144.t1 AT4G00380 57.895 76 32 0 501 576 560 635 6.70e-19 90.9
MS.gene94144.t1 AT4G00380 26.306 517 296 11 23 500 18 488 2.11e-40 155
MS.gene94144.t1 AT4G00380 57.895 76 32 0 501 576 560 635 6.70e-19 90.9
MS.gene94144.t1 AT4G00380 29.365 378 228 6 155 500 90 460 2.89e-39 152
MS.gene94144.t1 AT4G00380 57.895 76 32 0 501 576 532 607 7.01e-19 90.9
MS.gene94144.t1 AT3G29375 50.000 78 39 0 498 575 149 226 4.53e-20 90.1
MS.gene94144.t1 AT3G29375 50.000 78 39 0 498 575 272 349 1.11e-18 88.2
MS.gene94144.t1 AT4G01780 53.333 75 35 0 501 575 395 469 4.27e-18 87.8
MS.gene94144.t1 AT2G16490 33.117 154 91 3 430 576 1 149 5.92e-18 82.4

Find 121 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTGCAATTGTTGAATT+TGG 0.094302 6.4:+35000557 MS.gene94144:CDS
ATTTCCATTGCTTAATTAAA+TGG 0.098910 6.4:-35003310 None:intergenic
GGGGATTTGAAAACGGTTTC+TGG 0.111458 6.4:+35000764 MS.gene94144:CDS
TTCATTGGTCTTCAGCTTTA+AGG 0.118185 6.4:-35000843 None:intergenic
CACGAGTATATTCTAAATTT+TGG 0.119844 6.4:-34999956 None:intergenic
TTCGTTGGTTAATGTGAATT+TGG 0.249953 6.4:+35000349 MS.gene94144:CDS
GGCAAACACCTCCAGGAAAA+AGG 0.252537 6.4:+35000743 MS.gene94144:CDS
TAAGCAATGGAAATCAAATA+AGG 0.267301 6.4:+35003319 MS.gene94144:CDS
GAGCGAGGAGATAGACTATT+TGG 0.286214 6.4:+35000677 MS.gene94144:CDS
GATGCTTGAACATTTCAATA+AGG 0.290672 6.4:+35000937 MS.gene94144:CDS
TAGTCCTTGTTGTAGCAAAA+TGG 0.309878 6.4:-35000077 None:intergenic
TGTTGTCTGTTCCAATTCAT+TGG 0.315128 6.4:-35000858 None:intergenic
TTTGCTCCATCACTTTCCTT+AGG 0.315993 6.4:-35000907 None:intergenic
ACAGCTGAAAGGAGCTTTCC+AGG 0.321504 6.4:+35001893 MS.gene94144:CDS
AATTCCAGAGTTCCGGTATT+GGG 0.334900 6.4:-35003247 None:intergenic
AGCGGGATTACTTGGGTTTA+CGG 0.339146 6.4:+35000648 MS.gene94144:CDS
GGAAAAGGAAGAGGAATTAG+AGG 0.352913 6.4:+35001986 MS.gene94144:CDS
TCAACAAACACTGGTTGTTC+AGG 0.353904 6.4:+35002022 MS.gene94144:CDS
TCTTTAAAATTCCAGAGTTC+CGG 0.355321 6.4:-35003254 None:intergenic
CTGTGGTAAGCGGGATTACT+TGG 0.359149 6.4:+35000640 MS.gene94144:CDS
GCAGGCTGAACGCAAGTATC+AGG 0.361989 6.4:+35001173 MS.gene94144:CDS
ATATACTCGTGAATCTGATT+TGG 0.366588 6.4:+34999968 MS.gene94144:CDS
TTGCTCCATCACTTTCCTTA+GGG 0.374227 6.4:-35000906 None:intergenic
TCGTTGGTTAATGTGAATTT+GGG 0.376063 6.4:+35000350 MS.gene94144:CDS
GTTTCATTCTTTATTCTGCT+TGG 0.384896 6.4:+34999357 MS.gene94144:CDS
CTCTAATGTGATTCATTACC+TGG 0.385645 6.4:-35001911 None:intergenic
AAAGTTTGAAGGATGAGTTC+GGG 0.387895 6.4:+35003156 MS.gene94144:CDS
AAACAAGCTTGTCTCTGGTT+TGG 0.392657 6.4:+35000814 MS.gene94144:CDS
AAAGCTGAAGACCAATGAAT+TGG 0.393547 6.4:+35000847 MS.gene94144:CDS
ATGCTTGAACATTTCAATAA+GGG 0.393919 6.4:+35000938 MS.gene94144:CDS
GAAAAGAAGCCGAGGACAAT+AGG 0.397047 6.4:+35000786 MS.gene94144:CDS
TTTCCATTGCTTAATTAAAT+GGG 0.397793 6.4:-35003309 None:intergenic
TGCAAAACAAGCATTGGAAT+TGG 0.398690 6.4:+35001863 MS.gene94144:CDS
AAAAGTTTGAAGGATGAGTT+CGG 0.426423 6.4:+35003155 MS.gene94144:CDS
CAGAATGGAGCTGCAGGAAA+AGG 0.433632 6.4:+35001971 MS.gene94144:CDS
AAATTCCAGAGTTCCGGTAT+TGG 0.433634 6.4:-35003248 None:intergenic
AAAGCAAACAAGCTTGTCTC+TGG 0.443077 6.4:+35000809 MS.gene94144:CDS
ACTGCACTGTGGAACCTTCA+TGG 0.449566 6.4:+35000527 MS.gene94144:CDS
TGAAAAGCTGAAAAGTTTGA+AGG 0.453713 6.4:+35003145 MS.gene94144:CDS
TTGCATCCAGTCCTCTCTCC+AGG 0.453963 6.4:-35001845 None:intergenic
GTTTGCTTTCCTATTGTCCT+CGG 0.455452 6.4:-35000795 None:intergenic
GACTTATCATTACGAACAAC+AGG 0.456419 6.4:-35000242 None:intergenic
CTTCTTCTCAAAATATAGCT+TGG 0.458126 6.4:-35001313 None:intergenic
AGTCCTTGTTGTAGCAAAAT+GGG 0.460972 6.4:-35000076 None:intergenic
AAGCAATGGAAATCAAATAA+GGG 0.461528 6.4:+35003320 MS.gene94144:CDS
TTACTTGGGTTTACGGAAGC+AGG 0.462289 6.4:+35000655 MS.gene94144:CDS
AAGAGGAGCTGATTATGAAA+GGG 0.465044 6.4:+35000486 MS.gene94144:CDS
CCAGTCTGGAGCTGGAAGTT+CGG 0.471555 6.4:+35001223 MS.gene94144:CDS
AGCAATCAGAATGGAGCTGC+AGG 0.472823 6.4:+35001965 MS.gene94144:CDS
GGATCATGAAAATGCCAGTC+TGG 0.473814 6.4:+35001209 MS.gene94144:CDS
TGAAAATGCCAGTCTGGAGC+TGG 0.474792 6.4:+35001215 MS.gene94144:CDS
CAAACTTATATCCCGTGAAA+AGG 0.480262 6.4:+35001251 MS.gene94144:CDS
AAAGAGGAGCTGATTATGAA+AGG 0.493347 6.4:+35000485 MS.gene94144:CDS
TATGATATCAAGGATATAGT+TGG 0.497256 6.4:+35000722 MS.gene94144:CDS
AGGAAGGAAGGCTTCGTTGA+AGG 0.499099 6.4:+35003277 MS.gene94144:CDS
GAAGGATGAGTTCGGGGATG+AGG 0.499124 6.4:+35003163 MS.gene94144:CDS
AGCAGAGCACTGTGGTAAGC+GGG 0.500435 6.4:+35000631 MS.gene94144:CDS
AGAAATTAGCAAGATGCGGC+AGG 0.504034 6.4:+35001155 MS.gene94144:intron
GAATGTTGCTAAGGGTTCGT+TGG 0.504072 6.4:+35000334 MS.gene94144:CDS
CACAGTGCAGTAACTTTCAT+CGG 0.504310 6.4:-35000515 None:intergenic
CCGAACTTCCAGCTCCAGAC+TGG 0.505605 6.4:-35001223 None:intergenic
ACTTGTTAAGAATGTTGCTA+AGG 0.507417 6.4:+35000325 MS.gene94144:CDS
GAGACACACGTCCACAATTG+TGG 0.510194 6.4:+35000121 MS.gene94144:CDS
TCCAAATTCAACAATTGCAA+AGG 0.510603 6.4:-35000558 None:intergenic
TATAGTTGGCAAACACCTCC+AGG 0.512464 6.4:+35000736 MS.gene94144:CDS
AGCTACGGTGATGTTAAAGT+TGG 0.513136 6.4:+35000206 MS.gene94144:CDS
GGTATTGGGTACCGACCACT+AGG 0.514631 6.4:-35003233 None:intergenic
AGATAGACTATTTGGTTGGA+TGG 0.515691 6.4:+35000685 MS.gene94144:CDS
ATGAGTTGTTTGTATATCCA+TGG 0.518192 6.4:+35000384 MS.gene94144:CDS
CCAAATTCAACAATTGCAAA+GGG 0.521084 6.4:-35000557 None:intergenic
TTTCCCATTTAATTAAGCAA+TGG 0.524848 6.4:+35003306 MS.gene94144:CDS
ACTGGATGCAAAACAAGCAT+TGG 0.525557 6.4:+35001857 MS.gene94144:CDS
ACAATGCTATGAAGTTAGAA+AGG 0.526734 6.4:+35000600 MS.gene94144:CDS
TTGGATGTTGCAGAAAGAAA+AGG 0.529965 6.4:+35001797 MS.gene94144:intron
CTTGTTAAGAATGTTGCTAA+GGG 0.530987 6.4:+35000326 MS.gene94144:CDS
GGTACCCAATACCGGAACTC+TGG 0.532850 6.4:+35003243 MS.gene94144:CDS
GAGGAGATAGACTATTTGGT+TGG 0.535517 6.4:+35000681 MS.gene94144:CDS
TCGTGATGACTATGATATCA+AGG 0.536854 6.4:+35000712 MS.gene94144:CDS
TGTGGTAAGCGGGATTACTT+GGG 0.540703 6.4:+35000641 MS.gene94144:CDS
TCATGACCTGGAGAGAGGAC+TGG 0.550277 6.4:+35001839 MS.gene94144:CDS
CAAAGGGTAATTGTCCATGA+AGG 0.557538 6.4:-35000541 None:intergenic
TAGTGGTCGGTACCCAATAC+CGG 0.557758 6.4:+35003235 MS.gene94144:CDS
AAAATTGGAAGCAATCAGAA+TGG 0.559788 6.4:+35001956 MS.gene94144:CDS
TTTCTAACTTCATAGCATTG+TGG 0.565243 6.4:-35000598 None:intergenic
AAGGAAGGCTTCGTTGAAGG+AGG 0.570974 6.4:+35003280 MS.gene94144:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.576364 6.4:+35001977 MS.gene94144:CDS
ATGCAAGTCACCCACAATTG+TGG 0.577684 6.4:-35000132 None:intergenic
AAGTAGAAAGTATGTTGCGA+AGG 0.580726 6.4:+35000448 MS.gene94144:CDS
ATGAGGCGAAAGTGTCCCTA+AGG 0.584555 6.4:+35000891 MS.gene94144:CDS
GAAAAGGAAGAGGAATTAGA+GGG 0.585875 6.4:+35001987 MS.gene94144:CDS
AAAATTCATGACCTGGAGAG+AGG 0.591924 6.4:+35001834 MS.gene94144:CDS
TCACTAGCAGTACTAACAGC+AGG 0.592415 6.4:-35000266 None:intergenic
CTTGAAAGATGATTACTACA+AGG 0.592695 6.4:+35000019 MS.gene94144:CDS
AGACACACGTCCACAATTGT+GGG 0.595631 6.4:+35000122 MS.gene94144:CDS
AGTGTCCCTAAGGAAAGTGA+TGG 0.598158 6.4:+35000901 MS.gene94144:CDS
GTATCAGGAGAAAGTATCCA+AGG 0.603567 6.4:+35001188 MS.gene94144:CDS
TGTTGAATTTGGACGACAGT+GGG 0.605384 6.4:+35000568 MS.gene94144:CDS
TGCAGTAGCTACAACTCTGA+AGG 0.607260 6.4:+35003193 MS.gene94144:CDS
TCACAAGAAAATTCATGACC+TGG 0.607531 6.4:+35001827 MS.gene94144:CDS
TTGGAGATTGAACAGCTGAA+AGG 0.614196 6.4:+35001882 MS.gene94144:CDS
GGAAGATCTTCAACAAACAC+TGG 0.622373 6.4:+35002013 MS.gene94144:CDS
TAGCAGAGCACTGTGGTAAG+CGG 0.623837 6.4:+35000630 MS.gene94144:CDS
GACAACAAGCAAACATCATG+AGG 0.628408 6.4:+35000874 MS.gene94144:CDS
CATTAGAAATTAGCAAGATG+CGG 0.633212 6.4:+35001151 MS.gene94144:intron
GTCTGGAGCTGGAAGTTCGG+AGG 0.636966 6.4:+35001226 MS.gene94144:CDS
AGGAAGGCTTCGTTGAAGGA+GGG 0.636979 6.4:+35003281 MS.gene94144:CDS
GAATTTGGACGACAGTGGGA+TGG 0.637082 6.4:+35000572 MS.gene94144:CDS
GTTGTTTGTATATCCATGGA+TGG 0.639733 6.4:+35000388 MS.gene94144:CDS
AAGTTTGAAGGATGAGTTCG+GGG 0.641151 6.4:+35003157 MS.gene94144:CDS
AAAGGAAGAGGAATTAGAGG+GGG 0.645418 6.4:+35001989 MS.gene94144:CDS
GGTTTACGGAAGCAGGAGCG+AGG 0.648599 6.4:+35000662 MS.gene94144:CDS
GAAATGTATATTGAAAGCTA+CGG 0.650258 6.4:+35000191 MS.gene94144:CDS
AAAAGGAAGAGGAATTAGAG+GGG 0.657317 6.4:+35001988 MS.gene94144:CDS
TTGTTGAATTTGGACGACAG+TGG 0.663290 6.4:+35000567 MS.gene94144:CDS
ATGAGTACAACCCTAGTGGT+CGG 0.671880 6.4:+35003222 MS.gene94144:CDS
GGTTTCTGGAAAAGAAGCCG+AGG 0.676719 6.4:+35000778 MS.gene94144:CDS
TGTGGGTGACTTGCATGAGA+CGG 0.697226 6.4:+35000139 MS.gene94144:CDS
CGATGAAAGTTACTGCACTG+TGG 0.699936 6.4:+35000516 MS.gene94144:CDS
TTAAATGAGTACAACCCTAG+TGG 0.705810 6.4:+35003218 MS.gene94144:CDS
GTATTGGGTACCGACCACTA+GGG 0.725721 6.4:-35003232 None:intergenic
AGCTTTCTAGCAGAGCACTG+TGG 0.773857 6.4:+35000623 MS.gene94144:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGTTATTAAAAAATAAG+AGG - chr6.4:35001592-35001611 None:intergenic 10.0%
!! TAAGTTATTAAAAAATAAGA+GGG - chr6.4:35001591-35001610 None:intergenic 10.0%
!!! TATGATATTTTAATATTTCA+TGG + chr6.4:35001103-35001122 MS.gene94144:intron 10.0%
!! AATTAAAAACTGTAGATAAT+AGG - chr6.4:35001737-35001756 None:intergenic 15.0%
!! TAATTAGAAAGAATAGTAAT+TGG + chr6.4:35002983-35003002 MS.gene94144:intron 15.0%
!!! ATTTTGAAAAATATTGTTAC+TGG + chr6.4:35000413-35000432 MS.gene94144:CDS 15.0%
!!! TACTAATATATCTATGATTT+TGG + chr6.4:35001038-35001057 MS.gene94144:intron 15.0%
!!! TTTACATTTTATGTGAAAAT+TGG + chr6.4:35002492-35002511 MS.gene94144:intron 15.0%
!! AAATTGAATTGATCCAATAT+TGG + chr6.4:35000974-35000993 MS.gene94144:intron 20.0%
!! ATAAAATCAACTAGAAAGAA+AGG - chr6.4:34999522-34999541 None:intergenic 20.0%
!! ATATGTTAGATATATTTCAC+AGG + chr6.4:35003103-35003122 MS.gene94144:intron 20.0%
!! ATTTATGCTTAGATTTAACA+AGG - chr6.4:35002160-35002179 None:intergenic 20.0%
!! ATTTCCATTGCTTAATTAAA+TGG - chr6.4:35003313-35003332 None:intergenic 20.0%
!! TAAAATCAACTAGAAAGAAA+GGG - chr6.4:34999521-34999540 None:intergenic 20.0%
!! TATTAAAAAATAAGAGGGAT+TGG - chr6.4:35001586-35001605 None:intergenic 20.0%
!! TTAAATCTAAGCATAAATGT+AGG + chr6.4:35002162-35002181 MS.gene94144:intron 20.0%
!! TTTCCATTGCTTAATTAAAT+GGG - chr6.4:35003312-35003331 None:intergenic 20.0%
!!! AGCTTATTTTTAGTTATTGT+TGG + chr6.4:34999476-34999495 MS.gene94144:intron 20.0%
!!! TAAATTGGCTTCTTTAAAAA+TGG + chr6.4:35001487-35001506 MS.gene94144:intron 20.0%
!!! TTCATAATGTTTCACATTTT+AGG + chr6.4:34999586-34999605 MS.gene94144:intron 20.0%
!!! TTCTATACTTTACTTTTTCA+TGG + chr6.4:34999851-34999870 MS.gene94144:intron 20.0%
! AAAGTTGTAACTGATAAAGA+AGG + chr6.4:35002831-35002850 MS.gene94144:intron 25.0%
! AAGCAATGGAAATCAAATAA+GGG + chr6.4:35003320-35003339 MS.gene94144:CDS 25.0%
! AAGCTATAATTTCTGTGAAA+AGG + chr6.4:35002628-35002647 MS.gene94144:intron 25.0%
! AATAAGCTCAAAGTAAAATG+TGG - chr6.4:34999464-34999483 None:intergenic 25.0%
! AATTTACAGGAGAACTAAAT+TGG + chr6.4:35001472-35001491 MS.gene94144:intron 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG + chr6.4:35002633-35002652 MS.gene94144:intron 25.0%
! ATGCTTGAACATTTCAATAA+GGG + chr6.4:35000938-35000957 MS.gene94144:CDS 25.0%
! ATTCCTTAGATATAGAAACT+AGG - chr6.4:35002360-35002379 None:intergenic 25.0%
! ATTTCATTGTTTGTTCATAG+TGG + chr6.4:35002580-35002599 MS.gene94144:intron 25.0%
! GAAATGTATATTGAAAGCTA+CGG + chr6.4:35000191-35000210 MS.gene94144:CDS 25.0%
! GATTTGAATGTTTGCAAAAT+AGG - chr6.4:35002245-35002264 None:intergenic 25.0%
! TAAGCAATGGAAATCAAATA+AGG + chr6.4:35003319-35003338 MS.gene94144:CDS 25.0%
! TATAATTTCTGTGAAAAGGA+TGG + chr6.4:35002632-35002651 MS.gene94144:intron 25.0%
! TATGATATCAAGGATATAGT+TGG + chr6.4:35000722-35000741 MS.gene94144:CDS 25.0%
! TATGTGAAAATTGGTAGAAT+CGG + chr6.4:35002501-35002520 MS.gene94144:intron 25.0%
! TCGTGAAAAAATGATGTATT+TGG + chr6.4:35001681-35001700 MS.gene94144:intron 25.0%
! TCTAGATGAGAAGAAAAAAT+TGG + chr6.4:35001941-35001960 MS.gene94144:CDS 25.0%
! TTATCAGTTACAACTTTGAA+CGG - chr6.4:35002828-35002847 None:intergenic 25.0%
! TTTCCCATTTAATTAAGCAA+TGG + chr6.4:35003306-35003325 MS.gene94144:CDS 25.0%
! TTTGAAAGTGATCAATTTAC+AGG + chr6.4:35001459-35001478 MS.gene94144:intron 25.0%
!! AAACATTCAAATCATGCTTT+TGG + chr6.4:35002252-35002271 MS.gene94144:intron 25.0%
!! ATGTATATACTTGAGTTTTG+AGG + chr6.4:35001764-35001783 MS.gene94144:intron 25.0%
!! ATTTCACAGGAAATTTTAGA+CGG + chr6.4:35003116-35003135 MS.gene94144:intron 25.0%
!! ATTTTATGCAGTTCATAGAA+GGG - chr6.4:35003073-35003092 None:intergenic 25.0%
!! CACGAGTATATTCTAAATTT+TGG - chr6.4:34999959-34999978 None:intergenic 25.0%
!! CTTTGTAAAAACATTGGTTA+CGG - chr6.4:35002107-35002126 None:intergenic 25.0%
!! TATTTTATGCAGTTCATAGA+AGG - chr6.4:35003074-35003093 None:intergenic 25.0%
!!! AACCAATGTTTTTACAAAGT+AGG + chr6.4:35002108-35002127 MS.gene94144:intron 25.0%
!!! ACCAATGTTTTTACAAAGTA+GGG + chr6.4:35002109-35002128 MS.gene94144:intron 25.0%
!!! ATACACTTATTAGCTTTTTG+CGG - chr6.4:35002079-35002098 None:intergenic 25.0%
!!! ATTCCTTCTCATTGATTTAA+AGG + chr6.4:35000998-35001017 MS.gene94144:intron 25.0%
!!! CAACATACTTTCTACTTTTT+GGG - chr6.4:35000445-35000464 None:intergenic 25.0%
!!! TTCACATTTTAGGTAAGAAT+CGG + chr6.4:34999596-34999615 MS.gene94144:intron 25.0%
AAAAGTTTGAAGGATGAGTT+CGG + chr6.4:35003155-35003174 MS.gene94144:CDS 30.0%
AAAATTGGAAGCAATCAGAA+TGG + chr6.4:35001956-35001975 MS.gene94144:CDS 30.0%
AATAGTAATTGGTACTGTGT+AGG + chr6.4:35002994-35003013 MS.gene94144:intron 30.0%
AATGCTGCATTATATGCTTT+AGG - chr6.4:35002957-35002976 None:intergenic 30.0%
ACAATGCTATGAAGTTAGAA+AGG + chr6.4:35000600-35000619 MS.gene94144:CDS 30.0%
ACTTGATATTAAGCCATTTC+TGG + chr6.4:35002659-35002678 MS.gene94144:intron 30.0%
AGAAAATAAAAGCAATCGAG+TGG + chr6.4:35002760-35002779 MS.gene94144:intron 30.0%
ATAGTAATTGGTACTGTGTA+GGG + chr6.4:35002995-35003014 MS.gene94144:intron 30.0%
ATATACTCGTGAATCTGATT+TGG + chr6.4:34999968-34999987 MS.gene94144:CDS 30.0%
ATGAGAAGGAATACCAATAT+TGG - chr6.4:35000990-35001009 None:intergenic 30.0%
ATGAGTTGTTTGTATATCCA+TGG + chr6.4:35000384-35000403 MS.gene94144:CDS 30.0%
ATGCTGCATTATATGCTTTA+GGG - chr6.4:35002956-35002975 None:intergenic 30.0%
ATGTGAAAATTGGTAGAATC+GGG + chr6.4:35002502-35002521 MS.gene94144:intron 30.0%
CAGTTCTATTAAGACAATGT+TGG + chr6.4:35002919-35002938 MS.gene94144:intron 30.0%
CATCCTAGTTTCTATATCTA+AGG + chr6.4:35002354-35002373 MS.gene94144:intron 30.0%
CATTAGAAATTAGCAAGATG+CGG + chr6.4:35001151-35001170 MS.gene94144:intron 30.0%
CCAAATTCAACAATTGCAAA+GGG - chr6.4:35000560-35000579 None:intergenic 30.0%
CTATTGTTTAGCAACTTCTT+TGG + chr6.4:34999901-34999920 MS.gene94144:intron 30.0%
CTTCTTCTCAAAATATAGCT+TGG - chr6.4:35001316-35001335 None:intergenic 30.0%
CTTGAAAGATGATTACTACA+AGG + chr6.4:35000019-35000038 MS.gene94144:CDS 30.0%
CTTGTTAAGAATGTTGCTAA+GGG + chr6.4:35000326-35000345 MS.gene94144:CDS 30.0%
GATGCTTGAACATTTCAATA+AGG + chr6.4:35000937-35000956 MS.gene94144:CDS 30.0%
GGATCCAACAAAAATTAAAG+AGG + chr6.4:35000469-35000488 MS.gene94144:CDS 30.0%
GTGTCTGAACAAAAATCATA+AGG + chr6.4:34999775-34999794 MS.gene94144:intron 30.0%
GTTTCATTCTTTATTCTGCT+TGG + chr6.4:34999357-34999376 MS.gene94144:CDS 30.0%
TCACCTTTAAATCAATGAGA+AGG - chr6.4:35001004-35001023 None:intergenic 30.0%
TCCAAATTCAACAATTGCAA+AGG - chr6.4:35000561-35000580 None:intergenic 30.0%
TCCCTACTTTGTAAAAACAT+TGG - chr6.4:35002113-35002132 None:intergenic 30.0%
TGAAAAGCTGAAAAGTTTGA+AGG + chr6.4:35003145-35003164 MS.gene94144:CDS 30.0%
TTTCTAACTTCATAGCATTG+TGG - chr6.4:35000601-35000620 None:intergenic 30.0%
TTTCTCATATCGTTTCATAC+TGG + chr6.4:34999664-34999683 MS.gene94144:intron 30.0%
! AAGAAGCAGGTAATGTATTT+TGG + chr6.4:35001330-35001349 MS.gene94144:intron 30.0%
! ACTTGTTAAGAATGTTGCTA+AGG + chr6.4:35000325-35000344 MS.gene94144:CDS 30.0%
! TCGTTGGTTAATGTGAATTT+GGG + chr6.4:35000350-35000369 MS.gene94144:CDS 30.0%
! TTCGTTGGTTAATGTGAATT+TGG + chr6.4:35000349-35000368 MS.gene94144:CDS 30.0%
!! AGCTCCTCTTTAATTTTTGT+TGG - chr6.4:35000476-35000495 None:intergenic 30.0%
!! ATTGTTTGTTCATAGTGGAT+TGG + chr6.4:35002585-35002604 MS.gene94144:intron 30.0%
!! GAATTTTAAAGAAGGAAGGA+AGG + chr6.4:35003265-35003284 MS.gene94144:CDS 30.0%
!! GCAACATACTTTCTACTTTT+TGG - chr6.4:35000446-35000465 None:intergenic 30.0%
!! GGAATCTTATTTAAGTTGCT+TGG + chr6.4:35002273-35002292 MS.gene94144:intron 30.0%
!! TCTGGAATTTTAAAGAAGGA+AGG + chr6.4:35003261-35003280 MS.gene94144:CDS 30.0%
!! TCTTTAAAATTCCAGAGTTC+CGG - chr6.4:35003257-35003276 None:intergenic 30.0%
!! TGTTTTTACAAAGTAGGGAT+AGG + chr6.4:35002114-35002133 MS.gene94144:intron 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG + chr6.4:35001636-35001655 MS.gene94144:intron 30.0%
!! TTTTTCAAAATGACCATCCA+TGG - chr6.4:35000404-35000423 None:intergenic 30.0%
!!! GAACTCTGGAATTTTAAAGA+AGG + chr6.4:35003257-35003276 MS.gene94144:CDS 30.0%
!!! TACACTTATTAGCTTTTTGC+GGG - chr6.4:35002078-35002097 None:intergenic 30.0%
AAAAGGAAGAGGAATTAGAG+GGG + chr6.4:35001988-35002007 MS.gene94144:CDS 35.0%
AAAGAGGAGCTGATTATGAA+AGG + chr6.4:35000485-35000504 MS.gene94144:CDS 35.0%
AAAGCTGAAGACCAATGAAT+TGG + chr6.4:35000847-35000866 MS.gene94144:CDS 35.0%
AAAGTTTGAAGGATGAGTTC+GGG + chr6.4:35003156-35003175 MS.gene94144:CDS 35.0%
AACCACTTGATTCAGGTAAA+AGG - chr6.4:35002403-35002422 None:intergenic 35.0%
AAGAGGAGCTGATTATGAAA+GGG + chr6.4:35000486-35000505 MS.gene94144:CDS 35.0%
ACTGTGTTAAAGATCCAAGT+TGG + chr6.4:35002799-35002818 MS.gene94144:intron 35.0%
AGATAGACTATTTGGTTGGA+TGG + chr6.4:35000685-35000704 MS.gene94144:CDS 35.0%
ATTTGATACAGAAGACCGAA+TGG - chr6.4:35001555-35001574 None:intergenic 35.0%
CAAACTTATATCCCGTGAAA+AGG + chr6.4:35001251-35001270 MS.gene94144:CDS 35.0%
CCCTTTGCAATTGTTGAATT+TGG + chr6.4:35000557-35000576 MS.gene94144:CDS 35.0%
CGCATCTTGCTAATTTCTAA+TGG - chr6.4:35001153-35001172 None:intergenic 35.0%
CTAACAACACTCTTTGTGAT+TGG - chr6.4:35001514-35001533 None:intergenic 35.0%
CTCTAATGTGATTCATTACC+TGG - chr6.4:35001914-35001933 None:intergenic 35.0%
GAAAAGGAAGAGGAATTAGA+GGG + chr6.4:35001987-35002006 MS.gene94144:CDS 35.0%
GACTAAGAGAAAACTTTCAG+AGG + chr6.4:35002734-35002753 MS.gene94144:intron 35.0%
GACTTATCATTACGAACAAC+AGG - chr6.4:35000245-35000264 None:intergenic 35.0%
GGAAAAAGGGGATTTGAAAA+CGG + chr6.4:35000757-35000776 MS.gene94144:CDS 35.0%
GTATTTGGCAGAAGAACATA+AGG + chr6.4:35001696-35001715 MS.gene94144:intron 35.0%
GTTGTTTGTATATCCATGGA+TGG + chr6.4:35000388-35000407 MS.gene94144:CDS 35.0%
TCACAAGAAAATTCATGACC+TGG + chr6.4:35001827-35001846 MS.gene94144:CDS 35.0%
TCGTGATGACTATGATATCA+AGG + chr6.4:35000712-35000731 MS.gene94144:CDS 35.0%
TGATAAAGAAGGAAACTCCA+AGG + chr6.4:35002842-35002861 MS.gene94144:intron 35.0%
TGCTGCATTATATGCTTTAG+GGG - chr6.4:35002955-35002974 None:intergenic 35.0%
TGCTGTTGTTAGCACTTATT+TGG + chr6.4:35003035-35003054 MS.gene94144:intron 35.0%
TGTTAGCATTCCTTACTCTA+TGG + chr6.4:35001528-35001547 MS.gene94144:intron 35.0%
TGTTGTCTGTTCCAATTCAT+TGG - chr6.4:35000861-35000880 None:intergenic 35.0%
TTAAATGAGTACAACCCTAG+TGG + chr6.4:35003218-35003237 MS.gene94144:CDS 35.0%
TTCACGAAGTTATTGTACCT+TGG - chr6.4:35002862-35002881 None:intergenic 35.0%
TTGGATGTTGCAGAAAGAAA+AGG + chr6.4:35001797-35001816 MS.gene94144:intron 35.0%
! AAGTAGAAAGTATGTTGCGA+AGG + chr6.4:35000448-35000467 MS.gene94144:CDS 35.0%
! AGTCCTTGTTGTAGCAAAAT+GGG - chr6.4:35000079-35000098 None:intergenic 35.0%
! ATAGCTTGAGTGTTGTTCTT+TGG - chr6.4:35002615-35002634 None:intergenic 35.0%
! ATCCTTTTACCTGAATCAAG+TGG + chr6.4:35002398-35002417 MS.gene94144:intron 35.0%
! TAGCTTGAGTGTTGTTCTTT+GGG - chr6.4:35002614-35002633 None:intergenic 35.0%
! TAGTCCTTGTTGTAGCAAAA+TGG - chr6.4:35000080-35000099 None:intergenic 35.0%
! TTTTCAAATCCCCTTTTTCC+TGG - chr6.4:35000757-35000776 None:intergenic 35.0%
!! GCTATATTTTGAGAAGAAGC+AGG + chr6.4:35001317-35001336 MS.gene94144:CDS 35.0%
!! TGCAAAACAAGCATTGGAAT+TGG + chr6.4:35001863-35001882 MS.gene94144:CDS 35.0%
!! TTCATTGGTCTTCAGCTTTA+AGG - chr6.4:35000846-35000865 None:intergenic 35.0%
!!! TTGAGTTTTGAGGACTCTTT+TGG + chr6.4:35001774-35001793 MS.gene94144:intron 35.0%
AAAATTCATGACCTGGAGAG+AGG + chr6.4:35001834-35001853 MS.gene94144:CDS 40.0%
AAACAAGCTTGTCTCTGGTT+TGG + chr6.4:35000814-35000833 MS.gene94144:CDS 40.0%
AAAGCAAACAAGCTTGTCTC+TGG + chr6.4:35000809-35000828 MS.gene94144:CDS 40.0%
AAAGGAAGAGGAATTAGAGG+GGG + chr6.4:35001989-35002008 MS.gene94144:CDS 40.0%
AAATTCCAGAGTTCCGGTAT+TGG - chr6.4:35003251-35003270 None:intergenic 40.0%
AACAAGCAACCACTTGATTC+AGG - chr6.4:35002410-35002429 None:intergenic 40.0%
AACAGCCAATGCAAAACGTT+CGG + chr6.4:35002325-35002344 MS.gene94144:intron 40.0%
AAGTTTGAAGGATGAGTTCG+GGG + chr6.4:35003157-35003176 MS.gene94144:CDS 40.0%
AATTCCAGAGTTCCGGTATT+GGG - chr6.4:35003250-35003269 None:intergenic 40.0%
ACTGGATGCAAAACAAGCAT+TGG + chr6.4:35001857-35001876 MS.gene94144:CDS 40.0%
AGCTACGGTGATGTTAAAGT+TGG + chr6.4:35000206-35000225 MS.gene94144:CDS 40.0%
AGGTAAGAATCGGTAGAATC+AGG + chr6.4:34999606-34999625 MS.gene94144:intron 40.0%
CAAAGGGTAATTGTCCATGA+AGG - chr6.4:35000544-35000563 None:intergenic 40.0%
CACAGTGCAGTAACTTTCAT+CGG - chr6.4:35000518-35000537 None:intergenic 40.0%
CAGGTAAAAGGATGTTGCAT+TGG - chr6.4:35002391-35002410 None:intergenic 40.0%
CTGTTTGCATTCAAAGACGA+TGG + chr6.4:34999557-34999576 MS.gene94144:intron 40.0%
GACAACAAGCAAACATCATG+AGG + chr6.4:35000874-35000893 MS.gene94144:CDS 40.0%
GAGGAGATAGACTATTTGGT+TGG + chr6.4:35000681-35000700 MS.gene94144:CDS 40.0%
GGAAAAGGAAGAGGAATTAG+AGG + chr6.4:35001986-35002005 MS.gene94144:CDS 40.0%
GGAAGATCTTCAACAAACAC+TGG + chr6.4:35002013-35002032 MS.gene94144:CDS 40.0%
GTTTGCTTTCCTATTGTCCT+CGG - chr6.4:35000798-35000817 None:intergenic 40.0%
TCCTTACTCTATGGACCATT+CGG + chr6.4:35001537-35001556 MS.gene94144:intron 40.0%
TGTTGAATTTGGACGACAGT+GGG + chr6.4:35000568-35000587 MS.gene94144:CDS 40.0%
TTGCTCCATCACTTTCCTTA+GGG - chr6.4:35000909-35000928 None:intergenic 40.0%
TTGGAGATTGAACAGCTGAA+AGG + chr6.4:35001882-35001901 MS.gene94144:CDS 40.0%
TTGTTGAATTTGGACGACAG+TGG + chr6.4:35000567-35000586 MS.gene94144:CDS 40.0%
TTTGCTCCATCACTTTCCTT+AGG - chr6.4:35000910-35000929 None:intergenic 40.0%
! AAACACCGAACGTTTTGCAT+TGG - chr6.4:35002333-35002352 None:intergenic 40.0%
! ACTGGCATTTTCATGATCCT+TGG - chr6.4:35001208-35001227 None:intergenic 40.0%
! CTTTTGCAGATCCTTTTCAC+GGG - chr6.4:35001265-35001284 None:intergenic 40.0%
! GCTTTTGCAGATCCTTTTCA+CGG - chr6.4:35001266-35001285 None:intergenic 40.0%
! TCAACAAACACTGGTTGTTC+AGG + chr6.4:35002022-35002041 MS.gene94144:CDS 40.0%
! TTGCCCATTTTGCTACAACA+AGG + chr6.4:35000073-35000092 MS.gene94144:CDS 40.0%
!! GTATCAGGAGAAAGTATCCA+AGG + chr6.4:35001188-35001207 MS.gene94144:CDS 40.0%
!!! GTTTTGAGGACTCTTTTGGT+TGG + chr6.4:35001778-35001797 MS.gene94144:intron 40.0%
AATCAGGCGAGGTCTATGAA+AGG + chr6.4:34999622-34999641 MS.gene94144:intron 45.0%
ACCGAATGGTCCATAGAGTA+AGG - chr6.4:35001541-35001560 None:intergenic 45.0%
ACTTTGAACGGATGCCAACT+TGG - chr6.4:35002816-35002835 None:intergenic 45.0%
AGAAATTAGCAAGATGCGGC+AGG + chr6.4:35001155-35001174 MS.gene94144:intron 45.0%
AGACACACGTCCACAATTGT+GGG + chr6.4:35000122-35000141 MS.gene94144:CDS 45.0%
AGCGGGATTACTTGGGTTTA+CGG + chr6.4:35000648-35000667 MS.gene94144:CDS 45.0%
AGTGTCCCTAAGGAAAGTGA+TGG + chr6.4:35000901-35000920 MS.gene94144:CDS 45.0%
ATGAGTACAACCCTAGTGGT+CGG + chr6.4:35003222-35003241 MS.gene94144:CDS 45.0%
ATGCAAGTCACCCACAATTG+TGG - chr6.4:35000135-35000154 None:intergenic 45.0%
CAAACACCTCCAGGAAAAAG+GGG + chr6.4:35000745-35000764 MS.gene94144:CDS 45.0%
CGATGAAAGTTACTGCACTG+TGG + chr6.4:35000516-35000535 MS.gene94144:CDS 45.0%
CTCTTAGCTGCTTCCAGAAA+TGG - chr6.4:35002675-35002694 None:intergenic 45.0%
GAAAAGAAGCCGAGGACAAT+AGG + chr6.4:35000786-35000805 MS.gene94144:CDS 45.0%
GAATGTTGCTAAGGGTTCGT+TGG + chr6.4:35000334-35000353 MS.gene94144:CDS 45.0%
GAGCGAGGAGATAGACTATT+TGG + chr6.4:35000677-35000696 MS.gene94144:CDS 45.0%
GCAAACACCTCCAGGAAAAA+GGG + chr6.4:35000744-35000763 MS.gene94144:CDS 45.0%
GGATCATGAAAATGCCAGTC+TGG + chr6.4:35001209-35001228 MS.gene94144:CDS 45.0%
GGCAATAGCAGAGCAACAAA+AGG + chr6.4:35001657-35001676 MS.gene94144:intron 45.0%
GGGGATTTGAAAACGGTTTC+TGG + chr6.4:35000764-35000783 MS.gene94144:CDS 45.0%
TATAGTTGGCAAACACCTCC+AGG + chr6.4:35000736-35000755 MS.gene94144:CDS 45.0%
TCACTAGCAGTACTAACAGC+AGG - chr6.4:35000269-35000288 None:intergenic 45.0%
TGCAGTAGCTACAACTCTGA+AGG + chr6.4:35003193-35003212 MS.gene94144:CDS 45.0%
TGTGGTAAGCGGGATTACTT+GGG + chr6.4:35000641-35000660 MS.gene94144:CDS 45.0%
TTACTTGGGTTTACGGAAGC+AGG + chr6.4:35000655-35000674 MS.gene94144:CDS 45.0%
! TCAAATCCCCTTTTTCCTGG+AGG - chr6.4:35000754-35000773 None:intergenic 45.0%
AAGGAAGGCTTCGTTGAAGG+AGG + chr6.4:35003280-35003299 MS.gene94144:CDS 50.0%
AATCGAGTGGTGCTCGAAGT+GGG + chr6.4:35002773-35002792 MS.gene94144:intron 50.0%
ACAGCTGAAAGGAGCTTTCC+AGG + chr6.4:35001893-35001912 MS.gene94144:CDS 50.0%
ACTGCACTGTGGAACCTTCA+TGG + chr6.4:35000527-35000546 MS.gene94144:CDS 50.0%
AGAATCGGTAGAATCAGGCG+AGG + chr6.4:34999611-34999630 MS.gene94144:intron 50.0%
AGCAATCAGAATGGAGCTGC+AGG + chr6.4:35001965-35001984 MS.gene94144:CDS 50.0%
AGGAAGGAAGGCTTCGTTGA+AGG + chr6.4:35003277-35003296 MS.gene94144:CDS 50.0%
AGGAAGGCTTCGTTGAAGGA+GGG + chr6.4:35003281-35003300 MS.gene94144:CDS 50.0%
CAGAATGGAGCTGCAGGAAA+AGG + chr6.4:35001971-35001990 MS.gene94144:CDS 50.0%
CTGTGGTAAGCGGGATTACT+TGG + chr6.4:35000640-35000659 MS.gene94144:CDS 50.0%
GAATTTGGACGACAGTGGGA+TGG + chr6.4:35000572-35000591 MS.gene94144:CDS 50.0%
GAGACACACGTCCACAATTG+TGG + chr6.4:35000121-35000140 MS.gene94144:CDS 50.0%
GGCAAACACCTCCAGGAAAA+AGG + chr6.4:35000743-35000762 MS.gene94144:CDS 50.0%
TAGTGGTCGGTACCCAATAC+CGG + chr6.4:35003235-35003254 MS.gene94144:CDS 50.0%
! GGTTTCTGGAAAAGAAGCCG+AGG + chr6.4:35000778-35000797 MS.gene94144:CDS 50.0%
! TGAAAATGCCAGTCTGGAGC+TGG + chr6.4:35001215-35001234 MS.gene94144:CDS 50.0%
! TGTGGGTGACTTGCATGAGA+CGG + chr6.4:35000139-35000158 MS.gene94144:CDS 50.0%
!! AGCTTTCTAGCAGAGCACTG+TGG + chr6.4:35000623-35000642 MS.gene94144:CDS 50.0%
!! ATGAGGCGAAAGTGTCCCTA+AGG + chr6.4:35000891-35000910 MS.gene94144:CDS 50.0%
!! GTATTGGGTACCGACCACTA+GGG - chr6.4:35003235-35003254 None:intergenic 50.0%
!! TAGCAGAGCACTGTGGTAAG+CGG + chr6.4:35000630-35000649 MS.gene94144:CDS 50.0%
CAATCGAGTGGTGCTCGAAG+TGG + chr6.4:35002772-35002791 MS.gene94144:intron 55.0%
GAAGGATGAGTTCGGGGATG+AGG + chr6.4:35003163-35003182 MS.gene94144:CDS 55.0%
GCAGGCTGAACGCAAGTATC+AGG + chr6.4:35001173-35001192 MS.gene94144:CDS 55.0%
GGAAGAGGAATTAGAGGGGG+TGG + chr6.4:35001992-35002011 MS.gene94144:CDS 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG + chr6.4:35001977-35001996 MS.gene94144:CDS 55.0%
GGTACCCAATACCGGAACTC+TGG + chr6.4:35003243-35003262 MS.gene94144:CDS 55.0%
TCATGACCTGGAGAGAGGAC+TGG + chr6.4:35001839-35001858 MS.gene94144:CDS 55.0%
TTGCATCCAGTCCTCTCTCC+AGG - chr6.4:35001848-35001867 None:intergenic 55.0%
! CCAGTCTGGAGCTGGAAGTT+CGG + chr6.4:35001223-35001242 MS.gene94144:CDS 55.0%
!! AGCAGAGCACTGTGGTAAGC+GGG + chr6.4:35000631-35000650 MS.gene94144:CDS 55.0%
!! GGTATTGGGTACCGACCACT+AGG - chr6.4:35003236-35003255 None:intergenic 55.0%
CCGAACTTCCAGCTCCAGAC+TGG - chr6.4:35001226-35001245 None:intergenic 60.0%
GGTTTACGGAAGCAGGAGCG+AGG + chr6.4:35000662-35000681 MS.gene94144:CDS 60.0%
! GTCTGGAGCTGGAAGTTCGG+AGG + chr6.4:35001226-35001245 MS.gene94144:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 34999355 35003358 34999355 ID=MS.gene94144
chr6.4 mRNA 34999355 35003358 34999355 ID=MS.gene94144.t1;Parent=MS.gene94144
chr6.4 exon 34999355 34999378 34999355 ID=MS.gene94144.t1.exon1;Parent=MS.gene94144.t1
chr6.4 CDS 34999355 34999378 34999355 ID=cds.MS.gene94144.t1;Parent=MS.gene94144.t1
chr6.4 exon 34999951 35000959 34999951 ID=MS.gene94144.t1.exon2;Parent=MS.gene94144.t1
chr6.4 CDS 34999951 35000959 34999951 ID=cds.MS.gene94144.t1;Parent=MS.gene94144.t1
chr6.4 exon 35001157 35001338 35001157 ID=MS.gene94144.t1.exon3;Parent=MS.gene94144.t1
chr6.4 CDS 35001157 35001338 35001157 ID=cds.MS.gene94144.t1;Parent=MS.gene94144.t1
chr6.4 exon 35001810 35002094 35001810 ID=MS.gene94144.t1.exon4;Parent=MS.gene94144.t1
chr6.4 CDS 35001810 35002094 35001810 ID=cds.MS.gene94144.t1;Parent=MS.gene94144.t1
chr6.4 exon 35003125 35003358 35003125 ID=MS.gene94144.t1.exon5;Parent=MS.gene94144.t1
chr6.4 CDS 35003125 35003358 35003125 ID=cds.MS.gene94144.t1;Parent=MS.gene94144.t1
Gene Sequence

>MS.gene94144

ATGTTTCATTCTTTATTCTGCTTGGTAATAGCTTTTTCTCTTCAACTTAATAATCATCTATTTCAAAATCACTTATTTCATAGTAAGATTTTCGTCTAAATAATATCCACATTTTACTTTGAGCTTATTTTTAGTTATTGTTGGTATCTCTTTGTTAGTGTATCCCTTTCTTTCTAGTTGATTTTATGATTCTCATTATTTACTGTTTGCATTCAAAGACGATGGTTTTAATTCATAATGTTTCACATTTTAGGTAAGAATCGGTAGAATCAGGCGAGGTCTATGAAAGGAATAGATTTTCTTTGTTAATTTCTCATATCGTTTCATACTGGTTCATAATTTATACTGATTATTGTGTACTTAATTATTTATGTTCTGATTTTTTCATAATCGATTTATTTCTTTTTAGTATAGTTTTGAGTGTCTGAACAAAAATCATAAGGACAATGATATTATTATCGTTGTAATCATAAACTCATAATAATTAAATCATCTATTCTATACTTTACTTTTTCATGGCTTCATTTTAGTCGATTTATGTAGCAGCTATTGTTTAGCAACTTCTTTGGAATTGATTTTATGATTTTCATTTTCAGATGTACCAAAATTTAGAATATACTCGTGAATCTGATTTGGAGTACTACAAACGCATATATTACAAAGACTTGAAAGATGATTACTACAAGGACAAACTCAAAATATCTGATTCAACATATCGTTGCCCATTTTGCTACAACAAGGACTACTACTCTTTGAGTGAGCTATTGAGACACACGTCCACAATTGTGGGTGACTTGCATGAGACGGTTAAAGATATTGCTAAGCATTCAGCTCTTGAAATGTATATTGAAAGCTACGGTGATGTTAAAGTTGGTAAAGATAAGTCTCCTGTTGTTCGTAATGATAAGTCACCTGCTGTTAGTACTGCTAGTGATAAGTCAATTAATTTTAGTATCACTAACGAGAAGTCACTTGTTAAGAATGTTGCTAAGGGTTCGTTGGTTAATGTGAATTTGGGTGATGATGATGATGAGTTGTTTGTATATCCATGGATGGTCATTTTGAAAAATATTGTTACTGGTTTTAACCCAAAAAGTAGAAAGTATGTTGCGAAGGATCCAACAAAAATTAAAGAGGAGCTGATTATGAAAGGGTTTCATCCGATGAAAGTTACTGCACTGTGGAACCTTCATGGACAATTACCCTTTGCAATTGTTGAATTTGGACGACAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAAAGGAGCTTTCTAGCAGAGCACTGTGGTAAGCGGGATTACTTGGGTTTACGGAAGCAGGAGCGAGGAGATAGACTATTTGGTTGGATGGCACGTCGTGATGACTATGATATCAAGGATATAGTTGGCAAACACCTCCAGGAAAAAGGGGATTTGAAAACGGTTTCTGGAAAAGAAGCCGAGGACAATAGGAAAGCAAACAAGCTTGTCTCTGGTTTGGAAAATACCTTAAAGCTGAAGACCAATGAATTGGAACAGACAACAAGCAAACATCATGAGGCGAAAGTGTCCCTAAGGAAAGTGATGGAGCAAAAAGAGAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAATTAAATTGAATTGATCCAATATTGGTATTCCTTCTCATTGATTTAAAGGTGAAACATTATCATTTTTACTAATATATCTATGATTTTGGTTAGCTTACATTCTATTGCATTTTCGAATGATTTATAGTTGATATGATATTTTAATATTTCATGGTAGCTGAGTCTGTTTCATATTGTTCCATTAGAAATTAGCAAGATGCGGCAGGCTGAACGCAAGTATCAGGAGAAAGTATCCAAGGATCATGAAAATGCCAGTCTGGAGCTGGAAGTTCGGAGGAACAAACTTATATCCCGTGAAAAGGATCTGCAAAAGCGTCAAGAAGATAATCATAATGAGAGAACCAAGCTATATTTTGAGAAGAAGCAGGTAATGTATTTTGGCTCTTTGAATTTATCGTAGCAAAGCTAGATAAATAATTCTAACTTTTTAACTCTCTCATGAACACATTTTTTCTGATAGTGTGTTTCTAAAATTGTAACACATTTCTTTGAAAGTGATCAATTTACAGGAGAACTAAATTGGCTTCTTTAAAAATGGACCAATCACAAAGAGTGTTGTTAGCATTCCTTACTCTATGGACCATTCGGTCTTCTGTATCAAATTACGTACACCAATCCCTCTTATTTTTTAATAACTTATGACGAATTAAATTCGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCAATAGCAGAGCAACAAAAGGCTCGTGAAAAAATGATGTATTTGGCAGAAGAACATAAGGCACGTAGTTCATTTTCCTATTATCTACAGTTTTTAATTAAGTTACATGTATATACTTGAGTTTTGAGGACTCTTTTGGTTGGATGTTGCAGAAAGAAAAGGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTGGATGCAAAACAAGCATTGGAATTGGAGATTGAACAGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTAGAGATACTGATCTAGATGAGAAGAAAAAATTGGAAGCAATCAGAATGGAGCTGCAGGAAAAGGAAGAGGAATTAGAGGGGGTGGAAGATCTTCAACAAACACTGGTTGTTCAGGAGCTCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGCTAATAAGTGTATGTCTTCCGTAACCAATGTTTTTACAAAGTAGGGATAGGTTTTTTATTTGTAAAAATTTCCTTGTTAAATCTAAGCATAAATGTAGGATAATTTATATTTTTTAATTGACATAAAATTGTTTTATAATAATTATAGAAGAGTGTCCTATTTTGCAAACATTCAAATCATGCTTTTGGAATCTTATTTAAGTTGCTTGGAAGACAGTGTCTTGTTCACATGTATTTACAACAGCCAATGCAAAACGTTCGGTGTTTTCATCCTAGTTTCTATATCTAAGGAATTAAATTTTCCAATGCAACATCCTTTTACCTGAATCAAGTGGTTGCTTGTTTAAACTATATATTAGCTATCTAGTTGTTTGTCTCTAAAGATGATGATTTTAATACATAAAGTTTTACATTTTATGTGAAAATTGGTAGAATCGGGTCAAGTTTATGAGAAGAGCATATTTTCTTCATACATTTTTAGTTAATATGTCATGATTTCATTGTTTGTTCATAGTGGATTGGCTGCCCAAAGAACAACACTCAAGCTATAATTTCTGTGAAAAGGATGGGTGAACTTGATATTAAGCCATTTCTGGAAGCAGCTAAGAGAAAATTTTCTAATGAAATGAATGAGAAAGCAGCAACTAAGACTAAGAGAAAACTTTCAGAGGCTTAGAAAATAAAAGCAATCGAGTGGTGCTCGAAGTGGGAAGACTGTGTTAAAGATCCAAGTTGGCATCCGTTCAAAGTTGTAACTGATAAAGAAGGAAACTCCAAGGTACAATAACTTCGTGAATTATGTTTTTTCGTTAAAGTTAATATTTTTTTCTCAACAGTTCTATTAAGACAATGTTGGATATATTTATCCCCTAAAGCATATAATGCAGCATTTCTTATTAATTAGAAAGAATAGTAATTGGTACTGTGTAGGGATCTATTTACTGAAGCTTGCTGTTGTTAGCACTTATTTGGTTTTATTTGTTTCCCTTCTATGAACTGCATAAAATATGATCTAATATATGTTAGATATATTTCACAGGAAATTTTAGACGGAGAAGATGAAAAGCTGAAAAGTTTGAAGGATGAGTTCGGGGATGAGGTGCATGATGCAGTAGCTACAACTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTCGGTACCCAATACCGGAACTCTGGAATTTTAAAGAAGGAAGGAAGGCTTCGTTGAAGGAGGGTGTTTCCCATTTAATTAAGCAATGGAAATCAAATAAGGGAAAGAAAACTTATTGA
Protein sequence

>MS.gene94144.t1

MFHSLFCLMYQNLEYTRESDLEYYKRIYYKDLKDDYYKDKLKISDSTYRCPFCYNKDYYSLSELLRHTSTIVGDLHETVKDIAKHSALEMYIESYGDVKVGKDKSPVVRNDKSPAVSTASDKSINFSITNEKSLVKNVAKGSLVNVNLGDDDDELFVYPWMVILKNIVTGFNPKSRKYVAKDPTKIKEELIMKGFHPMKVTALWNLHGQLPFAIVEFGRQWDGFHNAMKLERSFLAEHCGKRDYLGLRKQERGDRLFGWMARRDDYDIKDIVGKHLQEKGDLKTVSGKEAEDNRKANKLVSGLENTLKLKTNELEQTTSKHHEAKVSLRKVMEQKEKMLEHFNKEISKMRQAERKYQEKVSKDHENASLELEVRRNKLISREKDLQKRQEDNHNERTKLYFEKKQKEKEKLHKKIHDLERGLDAKQALELEIEQLKGAFQVMNHIRDTDLDEKKKLEAIRMELQEKEEELEGVEDLQQTLVVQELKTNDELQDARKKLISEILDGEDEKLKSLKDEFGDEVHDAVATTLKELNEYNPSGRYPIPELWNFKEGRKASLKEGVSHLIKQWKSNKGKKTY