AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94495

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 155 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCCTTCTCCAATCTTAT+TGG 0.132396 2.3:+22467667 None:intergenic
AGTCTTGCTCGTGCTTTATT+TGG 0.201354 2.3:-22467321 MS.gene94495:intron
GACCCAAAGATATCTGATTT+TGG 0.205652 2.3:-22467029 MS.gene94495:CDS
GGACCGTATACTGATCTATT+TGG 0.229266 2.3:+22468296 None:intergenic
GCTGTTATCATTCTAGTATT+TGG 0.238381 2.3:-22468096 MS.gene94495:CDS
TTCCACCACAATTTATATAA+AGG 0.264234 2.3:+22469114 None:intergenic
ATGTCAGTCCAACAGGAAAT+TGG 0.268561 2.3:-22469025 MS.gene94495:CDS
CTTTGGTGGAAAGGATGTTT+TGG 0.276152 2.3:-22468069 MS.gene94495:CDS
TTGATATAAATGTGATATTC+AGG 0.280913 2.3:-22471274 MS.gene94495:CDS
ATACTTACAGTGTTCGAATC+TGG 0.281935 2.3:+22471851 None:intergenic
GTAACGATGACATCTTTAAA+TGG 0.283697 2.3:+22468374 None:intergenic
AAACCAAAATCAGATATCTT+TGG 0.290505 2.3:+22467026 None:intergenic
ATAGTAAGTCTAGCATTATT+TGG 0.306352 2.3:+22468942 None:intergenic
GCATAATAAGTCAACGAAAT+AGG 0.318463 2.3:+22468882 None:intergenic
CTTGGAGATCCGTTTGTATT+GGG 0.321453 2.3:-22468342 MS.gene94495:CDS
TGAGGAACTGCAACATCAAC+GGG 0.335770 2.3:-22471076 MS.gene94495:CDS
TCAAATGTCTGGAAATATTT+CGG 0.341377 2.3:-22471893 MS.gene94495:CDS
AAGATTGGAGAAGGAGGATT+TGG 0.341896 2.3:-22467662 MS.gene94495:CDS
GCTCCTGCAGATATGCTTCC+AGG 0.343714 2.3:+22468147 None:intergenic
TTTGATATTTCCAATAAGAT+TGG 0.347910 2.3:-22467677 MS.gene94495:CDS
TCCACCACAATTTATATAAA+GGG 0.353191 2.3:+22469115 None:intergenic
CACATTAGCACTAGAATTGC+TGG 0.367913 2.3:-22466975 MS.gene94495:CDS
CCTTGGAGATCCGTTTGTAT+TGG 0.372470 2.3:-22468343 MS.gene94495:CDS
AACCAAAATCAGATATCTTT+GGG 0.373149 2.3:+22467027 None:intergenic
AAATAATGCTAGACTTACTA+TGG 0.376104 2.3:-22468940 MS.gene94495:CDS
CGTGAAATTTGAGAAGGAAT+TGG 0.376409 2.3:+22471389 None:intergenic
TTCTAGTATTTGGTATACTT+TGG 0.389801 2.3:-22468086 MS.gene94495:CDS
GTCCAATTCTGAATAAAATC+AGG 0.394637 2.3:+22471567 None:intergenic
CCTTCAGTCTTGATTCTTCG+TGG 0.396951 2.3:+22467102 None:intergenic
AAGGATTGAAATTTCATCAA+TGG 0.400210 2.3:-22471313 MS.gene94495:CDS
AATATTTCCAGACATTTGAT+TGG 0.403462 2.3:+22471897 None:intergenic
CGTTTGTATTGGGCTGGAAA+AGG 0.404484 2.3:-22468332 MS.gene94495:CDS
CTCCCCAGCAATCGAGTAAC+CGG 0.405570 2.3:-22472072 MS.gene94495:CDS
ATCACCGATGATCAAACTTA+TGG 0.407230 2.3:-22468804 MS.gene94495:CDS
AAATTCCATGTCAGTCCAAC+AGG 0.408680 2.3:-22469032 MS.gene94495:CDS
TTCAATATTGCAGAAGAAGC+AGG 0.409988 2.3:-22468422 MS.gene94495:CDS
CGCTGATTTGATTTGTCGTA+AGG 0.414976 2.3:+22467709 None:intergenic
GACCGTATACTGATCTATTT+GGG 0.415994 2.3:+22468297 None:intergenic
GGAAATATTTCGGAGGAGCT+TGG 0.417766 2.3:-22471883 MS.gene94495:CDS
AATTGGGCATTTAGTACAAC+TGG 0.418677 2.3:-22469008 MS.gene94495:CDS
ACTGCTATCAATGTCCCATT+TGG 0.419347 2.3:+22467501 None:intergenic
GAAATATTTCGGAGGAGCTT+GGG 0.420332 2.3:-22471882 MS.gene94495:CDS
GATGATGATTCCGATTCATC+TGG 0.423069 2.3:-22469062 MS.gene94495:CDS
TTCTCCGGTAAAATTGTTAG+AGG 0.425461 2.3:+22471741 None:intergenic
TGAAATGCATAGGGATTTAA+CGG 0.426946 2.3:-22471920 MS.gene94495:intron
TGTCAGTCCAACAGGAAATT+GGG 0.429165 2.3:-22469024 MS.gene94495:CDS
TTAACGGCCAATCAAATGTC+TGG 0.433814 2.3:-22471904 MS.gene94495:CDS
CTCAGCTTTAACAACTTAAG+TGG 0.434782 2.3:-22470907 MS.gene94495:CDS
TACTTACAGTGTTCGAATCT+GGG 0.439569 2.3:+22471852 None:intergenic
CGGAGAACTACCTGCGACAT+TGG 0.439655 2.3:-22471725 MS.gene94495:CDS
TGTTGGTATTGCTAGAGGTT+TGG 0.443690 2.3:-22467132 MS.gene94495:CDS
TCTATTTGATATCTACCTTC+AGG 0.447369 2.3:-22468766 MS.gene94495:intron
GATCAAACTTATGGTAGTCT+TGG 0.450392 2.3:-22468795 MS.gene94495:CDS
ATTGAGGACAACCAATTCTC+TGG 0.462121 2.3:-22471597 MS.gene94495:CDS
GAGATCCGTTTGTATTGGGC+TGG 0.462315 2.3:-22468338 MS.gene94495:CDS
AGAATTGGTTGTCCTCAATT+CGG 0.464462 2.3:+22471601 None:intergenic
GACAGAATCATTCAAGGAAG+TGG 0.468286 2.3:-22471422 MS.gene94495:intron
TAGTATTTGGTATACTTTGG+TGG 0.469586 2.3:-22468083 MS.gene94495:CDS
AACACCAAATAAAATTAGAT+TGG 0.470991 2.3:-22467175 MS.gene94495:CDS
CCTTATCTTGTTAAACTCCA+TGG 0.471309 2.3:-22467399 MS.gene94495:CDS
GTTTGTATTGGGCTGGAAAA+GGG 0.471969 2.3:-22468331 MS.gene94495:CDS
AGGCGAATTAGTGATTTGAA+TGG 0.473156 2.3:-22471254 MS.gene94495:CDS
TGAACCGGTTACTCGATTGC+TGG 0.479225 2.3:+22472068 None:intergenic
ACTGATATAGCTGATATAAG+AGG 0.479651 2.3:+22468275 None:intergenic
TCACCGGACTGGTGCCAGCT+TGG 0.480200 2.3:-22470218 MS.gene94495:CDS
CCATGGAGTTTAACAAGATA+AGG 0.482609 2.3:+22467399 None:intergenic
GCAGGGAAAGCCGGTGCAAA+AGG 0.484005 2.3:-22468447 MS.gene94495:intron
CTCTGTATGCAGCCGAATTG+AGG 0.484488 2.3:-22471613 MS.gene94495:intron
TACTCCCTTTATATAAATTG+TGG 0.485229 2.3:-22469119 MS.gene94495:CDS
TCAGCTATATCAGTGGAATC+TGG 0.486030 2.3:-22468266 MS.gene94495:intron
AATCTCCACTGGTATTGAAC+CGG 0.487893 2.3:+22472053 None:intergenic
GTTGCTAATATATGAATACT+TGG 0.490362 2.3:-22467352 MS.gene94495:CDS
TTTAGCTGCTCCAGATGAAT+CGG 0.493543 2.3:+22469052 None:intergenic
TGCAGGGAAGTTTACCAAAT+GGG 0.493655 2.3:-22467515 MS.gene94495:intron
GAACCGGTTACTCGATTGCT+GGG 0.495994 2.3:+22472069 None:intergenic
TTTGGTATACTTTGGTGGAA+AGG 0.498013 2.3:-22468078 MS.gene94495:CDS
ATGCAGGGAAGTTTACCAAA+TGG 0.498045 2.3:-22467516 MS.gene94495:intron
AAATAGTTTAGATGTACAAA+CGG 0.498835 2.3:-22467741 MS.gene94495:CDS
AGGAGCTGTGGCTGGAATTG+TGG 0.508496 2.3:-22468130 MS.gene94495:CDS
CTAAATGCCCAATTTCCTGT+TGG 0.508509 2.3:+22469017 None:intergenic
CTCCCAAATAGATCAGTATA+CGG 0.509829 2.3:-22468299 MS.gene94495:CDS
TAAGTCTAGCATTATTTGGT+GGG 0.513098 2.3:+22468946 None:intergenic
AATTTCCTGTTGGACTGACA+TGG 0.515167 2.3:+22469027 None:intergenic
CAAGACTGAAGGTTGTTCAC+AGG 0.518567 2.3:-22467091 MS.gene94495:CDS
ATATCTGCAGGAGCTGTGGC+TGG 0.520792 2.3:-22468138 MS.gene94495:CDS
TTTCCAAGCTGGCACCAGTC+CGG 0.522189 2.3:+22470215 None:intergenic
TTTGACATATCTGACTCCCT+TGG 0.522846 2.3:+22469915 None:intergenic
ATCTGTGTTGGTATTGCTAG+AGG 0.523550 2.3:-22467137 MS.gene94495:CDS
GTGAGCTTTGCCAATGTCGC+AGG 0.526552 2.3:+22471715 None:intergenic
CACTTAAGTTGTTAAAGCTG+AGG 0.531888 2.3:+22470908 None:intergenic
TCCAATAAGATTGGAGAAGG+AGG 0.532435 2.3:-22467668 MS.gene94495:CDS
CTCACTTCAGCATAGCTACT+CGG 0.533967 2.3:+22470877 None:intergenic
TCCCTTTATATAAATTGTGG+TGG 0.534026 2.3:-22469116 MS.gene94495:CDS
AGGATTTGGTCCTGTGTACA+AGG 0.536296 2.3:-22467648 MS.gene94495:intron
GTAAGTCTAGCATTATTTGG+TGG 0.537281 2.3:+22468945 None:intergenic
AATAGTTTAGATGTACAAAC+GGG 0.537370 2.3:-22467740 MS.gene94495:CDS
ATTGTCCTCCTCGTCAAGCT+TGG 0.539676 2.3:+22467001 None:intergenic
CTCCATGGTTGTTGTGTGGA+GGG 0.541602 2.3:-22467384 MS.gene94495:CDS
GATATATTTGCAATCTCCAC+TGG 0.542381 2.3:+22472042 None:intergenic
CTCAAACGTGAAATTTGAGA+AGG 0.542568 2.3:+22471383 None:intergenic
TCAATATTGCAGAAGAAGCA+GGG 0.542837 2.3:-22468421 MS.gene94495:CDS
GGTTGTTCACAGGGACATCA+AGG 0.543964 2.3:-22467081 MS.gene94495:CDS
TTTCTTCAAAATCAAAGCAA+GGG 0.549486 2.3:-22467470 MS.gene94495:CDS
CTGGCACCAGTCCGGTGAGA+AGG 0.550390 2.3:+22470223 None:intergenic
CTTTCTTCAAAATCAAAGCA+AGG 0.550666 2.3:-22467471 MS.gene94495:CDS
CCACCTGGAAGCATATCTGC+AGG 0.552544 2.3:-22468150 MS.gene94495:CDS
ACAACTGGTATGTTCATTGA+TGG 0.552919 2.3:-22468993 MS.gene94495:CDS
ATTTATATAAAGGGAGTACA+AGG 0.553525 2.3:+22469124 None:intergenic
TGAAATGTTGCAGGGAAAGC+CGG 0.554111 2.3:-22468456 MS.gene94495:intron
CATCGTTACTAGCAATACCT+TGG 0.556808 2.3:-22468360 MS.gene94495:CDS
TTGAGGAACTGCAACATCAA+CGG 0.558596 2.3:-22471077 MS.gene94495:CDS
ATTTCCAATAAGATTGGAGA+AGG 0.563365 2.3:-22467671 MS.gene94495:CDS
AATCAAACAGACTCTCCACC+TGG 0.569739 2.3:-22468165 MS.gene94495:intron
CAATGTCGCAGGTAGTTCTC+CGG 0.571417 2.3:+22471726 None:intergenic
TAAACTCCATGGTTGTTGTG+TGG 0.583124 2.3:-22467388 MS.gene94495:CDS
ATGCAAAATACCTTGTACAC+AGG 0.587768 2.3:+22467638 None:intergenic
ACAAGGAAGAAGATCTGTGT+TGG 0.588951 2.3:-22467149 MS.gene94495:CDS
GAATGCATATTATCAAGTTG+TGG 0.592206 2.3:+22471212 None:intergenic
TTCATTGATGGTGATCAACT+CGG 0.592807 2.3:-22468981 MS.gene94495:CDS
GGAACAGTTTCGTGTTTGAG+CGG 0.595168 2.3:-22469647 MS.gene94495:CDS
TGGGAACCTTCTCACCGGAC+TGG 0.596647 2.3:-22470229 MS.gene94495:CDS
TAAAATTAGATTGGTCAACA+AGG 0.598706 2.3:-22467166 MS.gene94495:CDS
AATAACTTAAGCATCAGCCA+AGG 0.601077 2.3:-22469932 MS.gene94495:CDS
TTAACTGGGAACCTTCTCAC+CGG 0.601998 2.3:-22470234 MS.gene94495:CDS
ATATTATCAAGTTGTGGCAA+AGG 0.611307 2.3:+22471218 None:intergenic
GGCGGACACTGAATTGTACA+TGG 0.611953 2.3:-22468919 MS.gene94495:CDS
ACATTAGCACTAGAATTGCT+GGG 0.612762 2.3:-22466974 MS.gene94495:CDS
TGGTTTGGCCAAGCTTGACG+AGG 0.619289 2.3:-22467009 MS.gene94495:CDS
AAGCATATCTGCAGGAGCTG+TGG 0.619753 2.3:-22468142 MS.gene94495:CDS
CTCCCTCCACACAACAACCA+TGG 0.619992 2.3:+22467382 None:intergenic
ACTCCATGGTTGTTGTGTGG+AGG 0.621642 2.3:-22467385 MS.gene94495:CDS
CATGTTATTGTGTGCCAATG+AGG 0.621669 2.3:+22469785 None:intergenic
ATAACTTAAGCATCAGCCAA+GGG 0.625256 2.3:-22469931 MS.gene94495:CDS
CCACGAAGAATCAAGACTGA+AGG 0.625309 2.3:-22467102 MS.gene94495:CDS
CCAATACAAACGGATCTCCA+AGG 0.626222 2.3:+22468343 None:intergenic
ATGTTATTGTGTGCCAATGA+GGG 0.626779 2.3:+22469786 None:intergenic
TTTGGCCAAGCTTGACGAGG+AGG 0.626935 2.3:-22467006 MS.gene94495:CDS
ATTCGCATCAAGCAACACAT+TGG 0.633045 2.3:+22467055 None:intergenic
ACTACCATAAGTTTGATCAT+CGG 0.635211 2.3:+22468800 None:intergenic
ATCCACTAATAAAGGTCCAG+AGG 0.638411 2.3:-22467198 MS.gene94495:intron
AAGTCTAGCATTATTTGGTG+GGG 0.640269 2.3:+22468947 None:intergenic
CAATATTGCAGAAGAAGCAG+GGG 0.641072 2.3:-22468420 MS.gene94495:CDS
TCTTATATCAGCTATATCAG+TGG 0.645114 2.3:-22468273 MS.gene94495:CDS
ATTCAAGGAAGTGGATTAAG+CGG 0.646857 2.3:-22471413 MS.gene94495:CDS
TCAGTCTTGATTCTTCGTGG+AGG 0.646977 2.3:+22467105 None:intergenic
AAGACTGAAGGTTGTTCACA+GGG 0.649361 2.3:-22467090 MS.gene94495:CDS
AGTAGCTATGCTGAAGTGAG+CGG 0.656306 2.3:-22470874 MS.gene94495:CDS
AGTAACCGGTTCAATACCAG+TGG 0.659316 2.3:-22472058 MS.gene94495:CDS
AATGTCTGGAAATATTTCGG+AGG 0.669077 2.3:-22471890 MS.gene94495:CDS
AACCGGTTACTCGATTGCTG+GGG 0.676581 2.3:+22472070 None:intergenic
CATGAAGAAACTCACGTTTG+GGG 0.705719 2.3:+22469621 None:intergenic
AATATTGCAGAAGAAGCAGG+GGG 0.706710 2.3:-22468419 MS.gene94495:CDS
TAATGCTAGACTTACTATGG+CGG 0.710764 2.3:-22468937 MS.gene94495:CDS
CCTGCAGATATGCTTCCAGG+TGG 0.735277 2.3:+22468150 None:intergenic
GAGGAACTGCAACATCAACG+GGG 0.761478 2.3:-22471075 MS.gene94495:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACATAACAATAAATTA+TGG + chr2.3:22467262-22467281 None:intergenic 10.0%
!! ATTTCATAAAAAAGAAATTA+AGG - chr2.3:22470339-22470358 MS.gene94495:intron 10.0%
!!! ATAATTTACATATATTTTTC+AGG - chr2.3:22471465-22471484 MS.gene94495:intron 10.0%
!! CAAAAAAACATTTAAATTTC+AGG + chr2.3:22467557-22467576 None:intergenic 15.0%
!! TAAGATTCAAACATAATAAA+AGG + chr2.3:22469339-22469358 None:intergenic 15.0%
!!! GATATTTTTCGTATTTTAAT+TGG + chr2.3:22470423-22470442 None:intergenic 15.0%
!!! TATGTTTTTCAATTAAATAC+AGG - chr2.3:22467273-22467292 MS.gene94495:intron 15.0%
!!! TTTATGATAGATTTTTAACT+GGG - chr2.3:22468796-22468815 MS.gene94495:CDS 15.0%
!!! TTTTATATACTGATAAAGTA+AGG - chr2.3:22467712-22467731 MS.gene94495:CDS 15.0%
!!! TTTTATGATAGATTTTTAAC+TGG - chr2.3:22468795-22468814 MS.gene94495:CDS 15.0%
!! AAATAGTTTAGATGTACAAA+CGG - chr2.3:22471303-22471322 MS.gene94495:CDS 20.0%
!! AACACCAAATAAAATTAGAT+TGG - chr2.3:22471869-22471888 MS.gene94495:CDS 20.0%
!! ATAATAAAAGGAAATTGGAA+AGG + chr2.3:22469327-22469346 None:intergenic 20.0%
!! CAAACATAATAAAAGGAAAT+TGG + chr2.3:22469332-22469351 None:intergenic 20.0%
!! CACAATCATAAAAGAAAAAA+CGG + chr2.3:22468957-22468976 None:intergenic 20.0%
!! CTTATTATATCCACTAATAA+AGG - chr2.3:22471838-22471857 MS.gene94495:intron 20.0%
!! TAACTATCATGTTTATAGTT+TGG + chr2.3:22469784-22469803 None:intergenic 20.0%
!! TAATAAAAGGAAATTGGAAA+GGG + chr2.3:22469326-22469345 None:intergenic 20.0%
!! TTAAATGTTAGAACATTACA+TGG + chr2.3:22470845-22470864 None:intergenic 20.0%
!! TTACAATAAAGAAAAACTGT+TGG - chr2.3:22471025-22471044 MS.gene94495:intron 20.0%
!! TTGATATAAATGTGATATTC+AGG - chr2.3:22467770-22467789 MS.gene94495:intron 20.0%
!! TTTGATATTTCCAATAAGAT+TGG - chr2.3:22471367-22471386 MS.gene94495:intron 20.0%
!!! AATGGATTTTTTTTTCTAAG+TGG + chr2.3:22467057-22467076 None:intergenic 20.0%
!!! ACTTTAAAAAAAATCATCGA+TGG - chr2.3:22467586-22467605 MS.gene94495:intron 20.0%
!!! ATGGATTTTTTTTTCTAAGT+GGG + chr2.3:22467056-22467075 None:intergenic 20.0%
!!! GAGAAACTTTAGAAATATTA+AGG + chr2.3:22469880-22469899 None:intergenic 20.0%
!!! TATTTCACATTTTCTAACTT+AGG - chr2.3:22471787-22471806 MS.gene94495:intron 20.0%
!!! TGTTATTTCATTGTCTTAAT+TGG - chr2.3:22468607-22468626 MS.gene94495:intron 20.0%
!!! TTGACCAATCTAATTTTATT+TGG + chr2.3:22471876-22471895 None:intergenic 20.0%
! AAACCAAAATCAGATATCTT+TGG + chr2.3:22472021-22472040 None:intergenic 25.0%
! AAAGAAAAAAACAGCAAGAA+AGG - chr2.3:22467901-22467920 MS.gene94495:intron 25.0%
! AAATAATGCTAGACTTACTA+TGG - chr2.3:22470104-22470123 MS.gene94495:intron 25.0%
! AACCAAAATCAGATATCTTT+GGG + chr2.3:22472020-22472039 None:intergenic 25.0%
! AAGGATTGAAATTTCATCAA+TGG - chr2.3:22467731-22467750 MS.gene94495:CDS 25.0%
! AATAGTTTAGATGTACAAAC+GGG - chr2.3:22471304-22471323 MS.gene94495:CDS 25.0%
! AATATTTCCAGACATTTGAT+TGG + chr2.3:22467150-22467169 None:intergenic 25.0%
! AATGAGTGATCTATCATATA+TGG + chr2.3:22469625-22469644 None:intergenic 25.0%
! ATAGTAAGTCTAGCATTATT+TGG + chr2.3:22470105-22470124 None:intergenic 25.0%
! CTGAAGATGTTAATATTCAT+AGG - chr2.3:22468987-22469006 MS.gene94495:CDS 25.0%
! GCAAAGCTTAATATTTATCA+AGG + chr2.3:22468755-22468774 None:intergenic 25.0%
! GCAACCATATAATTACTTAA+AGG + chr2.3:22468401-22468420 None:intergenic 25.0%
! GTGACCTTTAAGTAATTATA+TGG - chr2.3:22468394-22468413 MS.gene94495:CDS 25.0%
! GTTGCTAATATATGAATACT+TGG - chr2.3:22471692-22471711 MS.gene94495:intron 25.0%
! TAAAGTACAATTTATTCCAC+TGG - chr2.3:22469594-22469613 MS.gene94495:intron 25.0%
! TACTCCCTTTATATAAATTG+TGG - chr2.3:22469925-22469944 MS.gene94495:CDS 25.0%
! TATCATGTTTATAGTTTGGT+TGG + chr2.3:22469780-22469799 None:intergenic 25.0%
! TCAAACTAATCTTGATTCTA+AGG - chr2.3:22469658-22469677 MS.gene94495:intron 25.0%
! TCAAATGTCTGGAAATATTT+CGG - chr2.3:22467151-22467170 MS.gene94495:CDS 25.0%
! TCCACCACAATTTATATAAA+GGG + chr2.3:22469932-22469951 None:intergenic 25.0%
! TGAATTGAACACAAATGAAA+TGG + chr2.3:22467075-22467094 None:intergenic 25.0%
! TGTATATCTTATTGTTTCAC+AGG - chr2.3:22467941-22467960 MS.gene94495:intron 25.0%
! TGTATCTTATCTTTCTACAT+TGG - chr2.3:22469549-22469568 MS.gene94495:intron 25.0%
! TTCCACCACAATTTATATAA+AGG + chr2.3:22469933-22469952 None:intergenic 25.0%
! TTCTAGTATTTGGTATACTT+TGG - chr2.3:22470958-22470977 MS.gene94495:intron 25.0%
! TTTCTTCAAAATCAAAGCAA+GGG - chr2.3:22471574-22471593 MS.gene94495:CDS 25.0%
!! AAATTATGGTTCTATTCCAT+AGG + chr2.3:22467248-22467267 None:intergenic 25.0%
!! AATCTTTCTTTTACTTCAAC+TGG - chr2.3:22471273-22471292 MS.gene94495:CDS 25.0%
!! AATTATGGTTCTATTCCATA+GGG + chr2.3:22467247-22467266 None:intergenic 25.0%
!! ATTTAGAATTACAAGAGTAG+AGG - chr2.3:22469504-22469523 MS.gene94495:intron 25.0%
!! ATTTATATAAAGGGAGTACA+AGG + chr2.3:22469923-22469942 None:intergenic 25.0%
!! ATTTTTAATCACGTATCTGT+TGG - chr2.3:22468250-22468269 MS.gene94495:intron 25.0%
!! TAAAATTAGATTGGTCAACA+AGG - chr2.3:22471878-22471897 MS.gene94495:CDS 25.0%
!! TACCTGATTTTATTCAGAAT+TGG - chr2.3:22467475-22467494 MS.gene94495:CDS 25.0%
!! TTTAGAATTACAAGAGTAGA+GGG - chr2.3:22469505-22469524 MS.gene94495:intron 25.0%
!! TTTTCCTTTACAGTTTGAAA+GGG + chr2.3:22468527-22468546 None:intergenic 25.0%
!! TTTTTCCTTTACAGTTTGAA+AGG + chr2.3:22468528-22468547 None:intergenic 25.0%
!!! AAAGATATCTGATTTTGGTT+TGG - chr2.3:22472020-22472039 MS.gene94495:intron 25.0%
!!! AAGTTTAACTTGAAATGCAT+AGG - chr2.3:22467114-22467133 MS.gene94495:CDS 25.0%
!!! AGTTTAACTTGAAATGCATA+GGG - chr2.3:22467115-22467134 MS.gene94495:CDS 25.0%
!!! ATTTTATTTGAGTAGTCACT+CGG - chr2.3:22470315-22470334 MS.gene94495:intron 25.0%
!!! ATTTTTCCTTTATGCTACTT+TGG - chr2.3:22471748-22471767 MS.gene94495:CDS 25.0%
!!! GTATCTTAGTGCAATTTTTT+TGG - chr2.3:22468222-22468241 MS.gene94495:intron 25.0%
!!! TGATTAACAGTTCACTTTTT+CGG - chr2.3:22470468-22470487 MS.gene94495:intron 25.0%
!!! TTTTTCCTTTATGCTACTTT+GGG - chr2.3:22471749-22471768 MS.gene94495:CDS 25.0%
AACAAAAACTCATTAGCAAG+AGG - chr2.3:22470999-22471018 MS.gene94495:intron 30.0%
AACAAATGCACAAAAATGCA+AGG + chr2.3:22469173-22469192 None:intergenic 30.0%
AACATGATAGTTAGAAAGAG+AGG - chr2.3:22469791-22469810 MS.gene94495:CDS 30.0%
AACTCAAAGAGTTTACTTCT+AGG - chr2.3:22469709-22469728 MS.gene94495:intron 30.0%
ACATATTCCTGAAACATACT+AGG + chr2.3:22468074-22468093 None:intergenic 30.0%
ACTACCATAAGTTTGATCAT+CGG + chr2.3:22470247-22470266 None:intergenic 30.0%
ACTGATATAGCTGATATAAG+AGG + chr2.3:22470772-22470791 None:intergenic 30.0%
AGGTTCCCTAAATTTACTTT+GGG - chr2.3:22469729-22469748 MS.gene94495:intron 30.0%
AGTGTCAAAGTGATAAGTTT+AGG - chr2.3:22468578-22468597 MS.gene94495:intron 30.0%
AGTTTGCCCAAAGTAAATTT+AGG + chr2.3:22469738-22469757 None:intergenic 30.0%
ATAGGGTGAACATCAATTAA+GGG + chr2.3:22467230-22467249 None:intergenic 30.0%
ATATCATGATATGTAACCTG+AGG - chr2.3:22471164-22471183 MS.gene94495:intron 30.0%
ATATCATTCCTCAAAATGCA+GGG - chr2.3:22471513-22471532 MS.gene94495:intron 30.0%
ATGAAAAAACAGTGAGATCT+TGG + chr2.3:22469468-22469487 None:intergenic 30.0%
ATTTCCAATAAGATTGGAGA+AGG - chr2.3:22471373-22471392 MS.gene94495:intron 30.0%
CACACAATAACATGTAAGTT+TGG - chr2.3:22469268-22469287 MS.gene94495:intron 30.0%
CTGAGACTTAATGAAACATT+TGG + chr2.3:22469027-22469046 None:intergenic 30.0%
CTTTCTTCAAAATCAAAGCA+AGG - chr2.3:22471573-22471592 MS.gene94495:CDS 30.0%
GAAAAAATCAACGAGAAAGA+AGG - chr2.3:22468542-22468561 MS.gene94495:intron 30.0%
GAAGATTAAACTCAACCTAA+TGG - chr2.3:22468348-22468367 MS.gene94495:CDS 30.0%
GCATAATAAGTCAACGAAAT+AGG + chr2.3:22470165-22470184 None:intergenic 30.0%
GCTATATAATGTAACGAGTA+AGG + chr2.3:22468044-22468063 None:intergenic 30.0%
GCTGTTATCATTCTAGTATT+TGG - chr2.3:22470948-22470967 MS.gene94495:intron 30.0%
GTAACGATGACATCTTTAAA+TGG + chr2.3:22470673-22470692 None:intergenic 30.0%
GTCCAATTCTGAATAAAATC+AGG + chr2.3:22467480-22467499 None:intergenic 30.0%
GTTTGCCCAAAGTAAATTTA+GGG + chr2.3:22469737-22469756 None:intergenic 30.0%
TAAGTCTAGCATTATTTGGT+GGG + chr2.3:22470101-22470120 None:intergenic 30.0%
TAGGTTCCCTAAATTTACTT+TGG - chr2.3:22469728-22469747 MS.gene94495:intron 30.0%
TAGTATTTGGTATACTTTGG+TGG - chr2.3:22470961-22470980 MS.gene94495:intron 30.0%
TCCCTTTATATAAATTGTGG+TGG - chr2.3:22469928-22469947 MS.gene94495:CDS 30.0%
TCTATTTGATATCTACCTTC+AGG - chr2.3:22470278-22470297 MS.gene94495:intron 30.0%
TCTTATATCAGCTATATCAG+TGG - chr2.3:22470771-22470790 MS.gene94495:intron 30.0%
TGAAATGCATAGGGATTTAA+CGG - chr2.3:22467124-22467143 MS.gene94495:CDS 30.0%
TGATTGGATTTCGTTTCAAA+AGG - chr2.3:22468493-22468512 MS.gene94495:intron 30.0%
TTCCTACGACATATTAGAAA+AGG + chr2.3:22469228-22469247 None:intergenic 30.0%
TTTCAACTTTCAGTCTGAAA+TGG - chr2.3:22468296-22468315 MS.gene94495:CDS 30.0%
! ACTTTTGACAGAATCATTCA+AGG - chr2.3:22467616-22467635 MS.gene94495:intron 30.0%
! ATATTATCAAGTTGTGGCAA+AGG + chr2.3:22467829-22467848 None:intergenic 30.0%
! ATATTGAAATCCTTTTGCAC+CGG + chr2.3:22470610-22470629 None:intergenic 30.0%
! CTTTCCTCTAACAATTTTAC+CGG - chr2.3:22467299-22467318 MS.gene94495:intron 30.0%
! GAATGCATATTATCAAGTTG+TGG + chr2.3:22467835-22467854 None:intergenic 30.0%
! GTAATCATCATGAAGCATTA+AGG - chr2.3:22470558-22470577 MS.gene94495:intron 30.0%
! TATTGTTTCACAGGATTTTG+AGG - chr2.3:22467950-22467969 MS.gene94495:intron 30.0%
!! TTGCAATACTTTTAAGTGCT+AGG - chr2.3:22468417-22468436 MS.gene94495:CDS 30.0%
!!! AATTTTATTTGGTGTTCCTC+TGG + chr2.3:22471865-22471884 None:intergenic 30.0%
AAAGTTGAAACCAGAGTTGT+TGG + chr2.3:22468286-22468305 None:intergenic 35.0%
AATAACTTAAGCATCAGCCA+AGG - chr2.3:22469112-22469131 MS.gene94495:CDS 35.0%
AATGTCTGGAAATATTTCGG+AGG - chr2.3:22467154-22467173 MS.gene94495:CDS 35.0%
AATTGGGCATTTAGTACAAC+TGG - chr2.3:22470036-22470055 MS.gene94495:intron 35.0%
ACAACTGGTATGTTCATTGA+TGG - chr2.3:22470051-22470070 MS.gene94495:intron 35.0%
ACATTAGCACTAGAATTGCT+GGG - chr2.3:22472070-22472089 MS.gene94495:CDS 35.0%
ACTTATTCCATTCCTTTCAG+AGG - chr2.3:22469376-22469395 MS.gene94495:intron 35.0%
ACTTTGGGCAAACTATAATC+AGG - chr2.3:22469744-22469763 MS.gene94495:intron 35.0%
AGAATTGGTTGTCCTCAATT+CGG + chr2.3:22467446-22467465 None:intergenic 35.0%
AGGCGAATTAGTGATTTGAA+TGG - chr2.3:22467790-22467809 MS.gene94495:intron 35.0%
AGTTGCAAGCTTACAAGAAA+TGG - chr2.3:22471211-22471230 MS.gene94495:CDS 35.0%
ATAACTTAAGCATCAGCCAA+GGG - chr2.3:22469113-22469132 MS.gene94495:CDS 35.0%
ATACTTACAGTGTTCGAATC+TGG + chr2.3:22467196-22467215 None:intergenic 35.0%
ATCACCGATGATCAAACTTA+TGG - chr2.3:22470240-22470259 MS.gene94495:CDS 35.0%
ATGCAAAATACCTTGTACAC+AGG + chr2.3:22471409-22471428 None:intergenic 35.0%
ATGTTATTGTGTGCCAATGA+GGG + chr2.3:22469261-22469280 None:intergenic 35.0%
CATAGGGTGAACATCAATTA+AGG + chr2.3:22467231-22467250 None:intergenic 35.0%
CATATCATTCCTCAAAATGC+AGG - chr2.3:22471512-22471531 MS.gene94495:intron 35.0%
CCATGGAGTTTAACAAGATA+AGG + chr2.3:22471648-22471667 None:intergenic 35.0%
CCTTATCTTGTTAAACTCCA+TGG - chr2.3:22471645-22471664 MS.gene94495:intron 35.0%
CGTGAAATTTGAGAAGGAAT+TGG + chr2.3:22467658-22467677 None:intergenic 35.0%
CTCAAACGTGAAATTTGAGA+AGG + chr2.3:22467664-22467683 None:intergenic 35.0%
CTCCCAAATAGATCAGTATA+CGG - chr2.3:22470745-22470764 MS.gene94495:intron 35.0%
CTTAATTGATGTTCACCCTA+TGG - chr2.3:22467229-22467248 MS.gene94495:intron 35.0%
CTTCACAGTGAAGAGAAAAA+CGG - chr2.3:22468699-22468718 MS.gene94495:intron 35.0%
GACCGTATACTGATCTATTT+GGG + chr2.3:22470750-22470769 None:intergenic 35.0%
GATATATTTGCAATCTCCAC+TGG + chr2.3:22467005-22467024 None:intergenic 35.0%
GATCAAACTTATGGTAGTCT+TGG - chr2.3:22470249-22470268 MS.gene94495:intron 35.0%
GGTACTGTATCAAATGATCT+AGG - chr2.3:22469570-22469589 MS.gene94495:intron 35.0%
GTAAGTCTAGCATTATTTGG+TGG + chr2.3:22470102-22470121 None:intergenic 35.0%
GTTGTGATTGAAATGTTGCA+GGG - chr2.3:22470580-22470599 MS.gene94495:intron 35.0%
TAATGCTAGACTTACTATGG+CGG - chr2.3:22470107-22470126 MS.gene94495:intron 35.0%
TACTTACAGTGTTCGAATCT+GGG + chr2.3:22467195-22467214 None:intergenic 35.0%
TAGAAAGAGAGGACTTTGTA+TGG - chr2.3:22469802-22469821 MS.gene94495:CDS 35.0%
TCAATATTGCAGAAGAAGCA+GGG - chr2.3:22470623-22470642 MS.gene94495:intron 35.0%
TTCAATATTGCAGAAGAAGC+AGG - chr2.3:22470622-22470641 MS.gene94495:intron 35.0%
TTCACAGTGAAGAGAAAAAC+GGG - chr2.3:22468700-22468719 MS.gene94495:intron 35.0%
TTCTCCGGTAAAATTGTTAG+AGG + chr2.3:22467306-22467325 None:intergenic 35.0%
TTGTTAAACCATGTACCTGA+AGG + chr2.3:22470296-22470315 None:intergenic 35.0%
TTTCACACTAGAGTCATAGA+TGG - chr2.3:22469686-22469705 MS.gene94495:intron 35.0%
TTTGGTATACTTTGGTGGAA+AGG - chr2.3:22470966-22470985 MS.gene94495:intron 35.0%
! AAGTCTAGCATTATTTGGTG+GGG + chr2.3:22470100-22470119 None:intergenic 35.0%
! ATCAAGATAAAACTAGCCTC+AGG + chr2.3:22471183-22471202 None:intergenic 35.0%
! CACCTTTTCTAATATGTCGT+AGG - chr2.3:22469223-22469242 MS.gene94495:intron 35.0%
! CACTTAAGTTGTTAAAGCTG+AGG + chr2.3:22468139-22468158 None:intergenic 35.0%
! CAGGTATTTTTCCAGAGAAT+TGG + chr2.3:22467461-22467480 None:intergenic 35.0%
! CGTGAGTTTTTAAACGAGAT+AGG - chr2.3:22471600-22471619 MS.gene94495:CDS 35.0%
! CTCAGCTTTAACAACTTAAG+TGG - chr2.3:22468137-22468156 MS.gene94495:CDS 35.0%
! GACCCAAAGATATCTGATTT+TGG - chr2.3:22472015-22472034 MS.gene94495:intron 35.0%
! GACTTATTATGCGTTTTGTC+TGG - chr2.3:22470173-22470192 MS.gene94495:intron 35.0%
! TATGCGTTTTGTCTGGTAAA+TGG - chr2.3:22470180-22470199 MS.gene94495:intron 35.0%
!! ATTCAAGGAAGTGGATTAAG+CGG - chr2.3:22467631-22467650 MS.gene94495:intron 35.0%
!! CTTAAACTGACTTGTATGTG+CGG - chr2.3:22467687-22467706 MS.gene94495:CDS 35.0%
!! GTGAAGGATTGGATTGATTT+TGG + chr2.3:22468685-22468704 None:intergenic 35.0%
!! TCTATTTCTGAAAGAAGCAG+AGG + chr2.3:22467881-22467900 None:intergenic 35.0%
!! TTCATTGATGGTGATCAACT+CGG - chr2.3:22470063-22470082 MS.gene94495:intron 35.0%
AAATTCCATGTCAGTCCAAC+AGG - chr2.3:22470012-22470031 MS.gene94495:intron 40.0%
AAGACTGAAGGTTGTTCACA+GGG - chr2.3:22471954-22471973 MS.gene94495:intron 40.0%
AAGATTGGAGAAGGAGGATT+TGG - chr2.3:22471382-22471401 MS.gene94495:intron 40.0%
AATATTGCAGAAGAAGCAGG+GGG - chr2.3:22470625-22470644 MS.gene94495:intron 40.0%
AATTTCCTGTTGGACTGACA+TGG + chr2.3:22470020-22470039 None:intergenic 40.0%
ACAAGGAAGAAGATCTGTGT+TGG - chr2.3:22471895-22471914 MS.gene94495:CDS 40.0%
ACTGCACAAACATCTGTGAT+TGG - chr2.3:22468477-22468496 MS.gene94495:intron 40.0%
ACTGCTATCAATGTCCCATT+TGG + chr2.3:22471546-22471565 None:intergenic 40.0%
AGCAACCCAAAGTAGCATAA+AGG + chr2.3:22471757-22471776 None:intergenic 40.0%
ATCATATATGGACACACCAG+TGG + chr2.3:22469613-22469632 None:intergenic 40.0%
ATCCACTAATAAAGGTCCAG+AGG - chr2.3:22471846-22471865 MS.gene94495:intron 40.0%
ATGCAGGGAAGTTTACCAAA+TGG - chr2.3:22471528-22471547 MS.gene94495:intron 40.0%
ATGTCAGTCCAACAGGAAAT+TGG - chr2.3:22470019-22470038 MS.gene94495:intron 40.0%
ATTCCTGAAACATACTAGGC+TGG + chr2.3:22468070-22468089 None:intergenic 40.0%
ATTCGCATCAAGCAACACAT+TGG + chr2.3:22471992-22472011 None:intergenic 40.0%
ATTGAGGACAACCAATTCTC+TGG - chr2.3:22467447-22467466 MS.gene94495:CDS 40.0%
CAATATTGCAGAAGAAGCAG+GGG - chr2.3:22470624-22470643 MS.gene94495:intron 40.0%
CACATTAGCACTAGAATTGC+TGG - chr2.3:22472069-22472088 MS.gene94495:CDS 40.0%
CATCGTTACTAGCAATACCT+TGG - chr2.3:22470684-22470703 MS.gene94495:intron 40.0%
CATGAAGAAACTCACGTTTG+GGG + chr2.3:22469426-22469445 None:intergenic 40.0%
CATGCCCTTTCAAACTGTAA+AGG - chr2.3:22468520-22468539 MS.gene94495:intron 40.0%
CATGTTATTGTGTGCCAATG+AGG + chr2.3:22469262-22469281 None:intergenic 40.0%
CTAAATGCCCAATTTCCTGT+TGG + chr2.3:22470030-22470049 None:intergenic 40.0%
CTATATCAGTGGAATCTGGT+GGG - chr2.3:22470782-22470801 MS.gene94495:intron 40.0%
CTTGGAGATCCGTTTGTATT+GGG - chr2.3:22470702-22470721 MS.gene94495:intron 40.0%
GAAATATTTCGGAGGAGCTT+GGG - chr2.3:22467162-22467181 MS.gene94495:CDS 40.0%
GACAGAATCATTCAAGGAAG+TGG - chr2.3:22467622-22467641 MS.gene94495:intron 40.0%
GATATCTACCTTCAGGTACA+TGG - chr2.3:22470285-22470304 MS.gene94495:intron 40.0%
GATGATGATTCCGATTCATC+TGG - chr2.3:22469982-22470001 MS.gene94495:intron 40.0%
GCATGAAGAAACTCACGTTT+GGG + chr2.3:22469427-22469446 None:intergenic 40.0%
GGACCGTATACTGATCTATT+TGG + chr2.3:22470751-22470770 None:intergenic 40.0%
GGTTGTGATTGAAATGTTGC+AGG - chr2.3:22470579-22470598 MS.gene94495:intron 40.0%
TAAACTCCATGGTTGTTGTG+TGG - chr2.3:22471656-22471675 MS.gene94495:intron 40.0%
TCAGCTATATCAGTGGAATC+TGG - chr2.3:22470778-22470797 MS.gene94495:intron 40.0%
TCCAATAAGATTGGAGAAGG+AGG - chr2.3:22471376-22471395 MS.gene94495:intron 40.0%
TCCTCCTTCTCCAATCTTAT+TGG + chr2.3:22471380-22471399 None:intergenic 40.0%
TGCAGGGAAGTTTACCAAAT+GGG - chr2.3:22471529-22471548 MS.gene94495:intron 40.0%
TGCATGAAGAAACTCACGTT+TGG + chr2.3:22469428-22469447 None:intergenic 40.0%
TGTCAGTCCAACAGGAAATT+GGG - chr2.3:22470020-22470039 MS.gene94495:intron 40.0%
TGTTGGTATTGCTAGAGGTT+TGG - chr2.3:22471912-22471931 MS.gene94495:intron 40.0%
TTAACGGCCAATCAAATGTC+TGG - chr2.3:22467140-22467159 MS.gene94495:CDS 40.0%
TTCCTCTGGACCTTTATTAG+TGG + chr2.3:22471851-22471870 None:intergenic 40.0%
TTCTCTTCACTGTGAAGGAT+TGG + chr2.3:22468696-22468715 None:intergenic 40.0%
TTGACTACTTGAGCTCCATT+AGG + chr2.3:22468366-22468385 None:intergenic 40.0%
TTGAGGAACTGCAACATCAA+CGG - chr2.3:22467967-22467986 MS.gene94495:intron 40.0%
TTTAGCTGCTCCAGATGAAT+CGG + chr2.3:22469995-22470014 None:intergenic 40.0%
TTTGACATATCTGACTCCCT+TGG + chr2.3:22469132-22469151 None:intergenic 40.0%
! AACTGTTCCTCTGAAAGGAA+TGG + chr2.3:22469386-22469405 None:intergenic 40.0%
! AATCTCCACTGGTATTGAAC+CGG + chr2.3:22466994-22467013 None:intergenic 40.0%
! AGTCTTGCTCGTGCTTTATT+TGG - chr2.3:22471723-22471742 MS.gene94495:CDS 40.0%
! ATCTGTGTTGGTATTGCTAG+AGG - chr2.3:22471907-22471926 MS.gene94495:CDS 40.0%
! CGTTTTTCTCTTCACTGTGA+AGG + chr2.3:22468701-22468720 None:intergenic 40.0%
! CTTTGGTGGAAAGGATGTTT+TGG - chr2.3:22470975-22470994 MS.gene94495:intron 40.0%
! CTTTTCCAGCCCAATACAAA+CGG + chr2.3:22470714-22470733 None:intergenic 40.0%
! GTAAACTTCCCTGCATTTTG+AGG + chr2.3:22471524-22471543 None:intergenic 40.0%
! GTTTGTATTGGGCTGGAAAA+GGG - chr2.3:22470713-22470732 MS.gene94495:intron 40.0%
! TCGATGTTCTTTTTCCAAGC+TGG + chr2.3:22468843-22468862 None:intergenic 40.0%
!! CGCTGATTTGATTTGTCGTA+AGG + chr2.3:22471338-22471357 None:intergenic 40.0%
!! GAACTTGTTTTCTCCCTCAT+TGG - chr2.3:22469245-22469264 MS.gene94495:intron 40.0%
!!! TGATTTTGGTAACTGACTCG+AGG + chr2.3:22468671-22468690 None:intergenic 40.0%
AATCAAACAGACTCTCCACC+TGG - chr2.3:22470879-22470898 MS.gene94495:CDS 45.0%
AATTCGGCTGCATACAGAGA+GGG + chr2.3:22467430-22467449 None:intergenic 45.0%
AGTAGCTATGCTGAAGTGAG+CGG - chr2.3:22468170-22468189 MS.gene94495:intron 45.0%
CAAGACTGAAGGTTGTTCAC+AGG - chr2.3:22471953-22471972 MS.gene94495:intron 45.0%
CACGAAACTGTTCCTCTGAA+AGG + chr2.3:22469391-22469410 None:intergenic 45.0%
CCAATACAAACGGATCTCCA+AGG + chr2.3:22470704-22470723 None:intergenic 45.0%
CCACGAAGAATCAAGACTGA+AGG - chr2.3:22471942-22471961 MS.gene94495:intron 45.0%
CCTTCAGTCTTGATTCTTCG+TGG + chr2.3:22471945-22471964 None:intergenic 45.0%
CCTTGGAGATCCGTTTGTAT+TGG - chr2.3:22470701-22470720 MS.gene94495:intron 45.0%
CTACTTCACACCAACAACTC+TGG - chr2.3:22468273-22468292 MS.gene94495:CDS 45.0%
CTCACTTCAGCATAGCTACT+CGG + chr2.3:22468170-22468189 None:intergenic 45.0%
GAGGGTAAGCATGTTCTAGT+AGG - chr2.3:22469523-22469542 MS.gene94495:intron 45.0%
GCTATATCAGTGGAATCTGG+TGG - chr2.3:22470781-22470800 MS.gene94495:intron 45.0%
GGAAATATTTCGGAGGAGCT+TGG - chr2.3:22467161-22467180 MS.gene94495:CDS 45.0%
GGAACAGTTTCGTGTTTGAG+CGG - chr2.3:22469397-22469416 MS.gene94495:intron 45.0%
GGGTGAACATCAATTAAGGG+TGG + chr2.3:22467227-22467246 None:intergenic 45.0%
TCAGTCTTGATTCTTCGTGG+AGG + chr2.3:22471942-22471961 None:intergenic 45.0%
TCTCCAGCCTAGTATGTTTC+AGG - chr2.3:22468064-22468083 MS.gene94495:CDS 45.0%
TGAAATGTTGCAGGGAAAGC+CGG - chr2.3:22470588-22470607 MS.gene94495:intron 45.0%
TGAGGAACTGCAACATCAAC+GGG - chr2.3:22467968-22467987 MS.gene94495:intron 45.0%
TTAACTGGGAACCTTCTCAC+CGG - chr2.3:22468810-22468829 MS.gene94495:CDS 45.0%
! AGGATTTGGTCCTGTGTACA+AGG - chr2.3:22471396-22471415 MS.gene94495:CDS 45.0%
! AGTAACCGGTTCAATACCAG+TGG - chr2.3:22466986-22467005 MS.gene94495:CDS 45.0%
! CGTTTGTATTGGGCTGGAAA+AGG - chr2.3:22470712-22470731 MS.gene94495:intron 45.0%
! GTGAGATCTTGGCTCTCTAT+AGG + chr2.3:22469457-22469476 None:intergenic 45.0%
AACCGGTTACTCGATTGCTG+GGG + chr2.3:22466977-22466996 None:intergenic 50.0%
AAGCATATCTGCAGGAGCTG+TGG - chr2.3:22470902-22470921 MS.gene94495:CDS 50.0%
ACTCCATGGTTGTTGTGTGG+AGG - chr2.3:22471659-22471678 MS.gene94495:intron 50.0%
ATTGTCCTCCTCGTCAAGCT+TGG + chr2.3:22472046-22472065 None:intergenic 50.0%
CAATGTCGCAGGTAGTTCTC+CGG + chr2.3:22467321-22467340 None:intergenic 50.0%
CAATTCGGCTGCATACAGAG+AGG + chr2.3:22467431-22467450 None:intergenic 50.0%
CTCCATGGTTGTTGTGTGGA+GGG - chr2.3:22471660-22471679 MS.gene94495:intron 50.0%
CTCTGTATGCAGCCGAATTG+AGG - chr2.3:22467431-22467450 MS.gene94495:CDS 50.0%
GAACCGGTTACTCGATTGCT+GGG + chr2.3:22466978-22466997 None:intergenic 50.0%
GAGATCCGTTTGTATTGGGC+TGG - chr2.3:22470706-22470725 MS.gene94495:intron 50.0%
GAGGAACTGCAACATCAACG+GGG - chr2.3:22467969-22467988 MS.gene94495:intron 50.0%
GGCGGACACTGAATTGTACA+TGG - chr2.3:22470125-22470144 MS.gene94495:intron 50.0%
GGTTGTTCACAGGGACATCA+AGG - chr2.3:22471963-22471982 MS.gene94495:intron 50.0%
TGAACCGGTTACTCGATTGC+TGG + chr2.3:22466979-22466998 None:intergenic 50.0%
AGGAGCTGTGGCTGGAATTG+TGG - chr2.3:22470914-22470933 MS.gene94495:CDS 55.0%
ATATCTGCAGGAGCTGTGGC+TGG - chr2.3:22470906-22470925 MS.gene94495:CDS 55.0%
CCTGCAGATATGCTTCCAGG+TGG + chr2.3:22470897-22470916 None:intergenic 55.0%
CGGAGAACTACCTGCGACAT+TGG - chr2.3:22467319-22467338 MS.gene94495:intron 55.0%
CTCCCCAGCAATCGAGTAAC+CGG - chr2.3:22466972-22466991 MS.gene94495:CDS 55.0%
CTCCCTCCACACAACAACCA+TGG + chr2.3:22471665-22471684 None:intergenic 55.0%
GCTCCTGCAGATATGCTTCC+AGG + chr2.3:22470900-22470919 None:intergenic 55.0%
GTGAGCTTTGCCAATGTCGC+AGG + chr2.3:22467332-22467351 None:intergenic 55.0%
TTTCCAAGCTGGCACCAGTC+CGG + chr2.3:22468832-22468851 None:intergenic 55.0%
TTTGGCCAAGCTTGACGAGG+AGG - chr2.3:22472038-22472057 MS.gene94495:CDS 55.0%
! CCACCTGGAAGCATATCTGC+AGG - chr2.3:22470894-22470913 MS.gene94495:CDS 55.0%
! TGGTTTGGCCAAGCTTGACG+AGG - chr2.3:22472035-22472054 MS.gene94495:CDS 55.0%
GCAGAAGAAGCAGGGGGAGT+TGG - chr2.3:22470631-22470650 MS.gene94495:intron 60.0%
GCAGGGAAAGCCGGTGCAAA+AGG - chr2.3:22470597-22470616 MS.gene94495:intron 60.0%
TGGGAACCTTCTCACCGGAC+TGG - chr2.3:22468815-22468834 MS.gene94495:CDS 60.0%
CTGGCACCAGTCCGGTGAGA+AGG + chr2.3:22468824-22468843 None:intergenic 65.0%
!! TCACCGGACTGGTGCCAGCT+TGG - chr2.3:22468826-22468845 MS.gene94495:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 22466968 22472098 22466968 ID=MS.gene94495
chr2.3 mRNA 22466968 22472098 22466968 ID=MS.gene94495.t1;Parent=MS.gene94495
chr2.3 exon 22472027 22472098 22472027 ID=MS.gene94495.t1.exon1;Parent=MS.gene94495.t1
chr2.3 CDS 22472027 22472098 22472027 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22471859 22471930 22471859 ID=MS.gene94495.t1.exon2;Parent=MS.gene94495.t1
chr2.3 CDS 22471859 22471930 22471859 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22471700 22471771 22471700 ID=MS.gene94495.t1.exon3;Parent=MS.gene94495.t1
chr2.3 CDS 22471700 22471771 22471700 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22471552 22471623 22471552 ID=MS.gene94495.t1.exon4;Parent=MS.gene94495.t1
chr2.3 CDS 22471552 22471623 22471552 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22471384 22471439 22471384 ID=MS.gene94495.t1.exon5;Parent=MS.gene94495.t1
chr2.3 CDS 22471384 22471439 22471384 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22471200 22471332 22471200 ID=MS.gene94495.t1.exon6;Parent=MS.gene94495.t1
chr2.3 CDS 22471200 22471332 22471200 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22471032 22471103 22471032 ID=MS.gene94495.t1.exon7;Parent=MS.gene94495.t1
chr2.3 CDS 22471032 22471103 22471032 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22470862 22470933 22470862 ID=MS.gene94495.t1.exon8;Parent=MS.gene94495.t1
chr2.3 CDS 22470862 22470933 22470862 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22470201 22470260 22470201 ID=MS.gene94495.t1.exon9;Parent=MS.gene94495.t1
chr2.3 CDS 22470201 22470260 22470201 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22469905 22469967 22469905 ID=MS.gene94495.t1.exon10;Parent=MS.gene94495.t1
chr2.3 CDS 22469905 22469967 22469905 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22469786 22469821 22469786 ID=MS.gene94495.t1.exon11;Parent=MS.gene94495.t1
chr2.3 CDS 22469786 22469821 22469786 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22469636 22469670 22469636 ID=MS.gene94495.t1.exon12;Parent=MS.gene94495.t1
chr2.3 CDS 22469636 22469670 22469636 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22468767 22469146 22468767 ID=MS.gene94495.t1.exon13;Parent=MS.gene94495.t1
chr2.3 CDS 22468767 22469146 22468767 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22468267 22468465 22468267 ID=MS.gene94495.t1.exon14;Parent=MS.gene94495.t1
chr2.3 CDS 22468267 22468465 22468267 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22468046 22468177 22468046 ID=MS.gene94495.t1.exon15;Parent=MS.gene94495.t1
chr2.3 CDS 22468046 22468177 22468046 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22467649 22467767 22467649 ID=MS.gene94495.t1.exon16;Parent=MS.gene94495.t1
chr2.3 CDS 22467649 22467767 22467649 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22467322 22467532 22467322 ID=MS.gene94495.t1.exon17;Parent=MS.gene94495.t1
chr2.3 CDS 22467322 22467532 22467322 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
chr2.3 exon 22466968 22467206 22466968 ID=MS.gene94495.t1.exon18;Parent=MS.gene94495.t1
chr2.3 CDS 22466968 22467206 22466968 ID=cds.MS.gene94495.t1;Parent=MS.gene94495.t1
Gene Sequence

>MS.gene94495

TAGTCTCCCCAGCAATCGAGTAACCGGTTCAATACCAGTGGAGATTGCAAATATATCTACTCTGATACAGTTGTGAGTTACTGATCCCACTTAGAAAAAAAAATCCATTTCATTTGTGTTCAATTCAAAGAGTTTAAGTAGAACTTAAGTTTAACTTGAAATGCATAGGGATTTAACGGCCAATCAAATGTCTGGAAATATTTCGGAGGAGCTTGGGAATCTAACCCAGATTCGAACACTGTAAGTATTTTTTTTTCCACCCTTAATTGATGTTCACCCTATGGAATAGAACCATAATTTATTGTTATGTTTTTCAATTAAATACAGGAAACTTTCCTCTAACAATTTTACCGGAGAACTACCTGCGACATTGGCAAAGCTCACTACATTGCAAGATTTGTAAGCATTAAATTTTTAATATTGATGTTTCAAATATTAGTGATGCTTCAAATATTTATGCCCTCTCTGTATGCAGCCGAATTGAGGACAACCAATTCTCTGGAAAAATACCTGATTTTATTCAGAATTGGACAAATATCAATACATTGTAAGCACTCTGATTTTTTTTTTTTTTATTTTAATTTTTCCTGAAATTTAAATGTTTTTTTGTATTGCTTGACTTTAAAAAAAATCATCGATGGTTACTTTACTTTTGACAGAATCATTCAAGGAAGTGGATTAAGCGGACCAATTCCTTCTCAAATTTCACGTTTGAGTAACTTAAACTGACTTGTATGTGCGGTATTTTATATACTGATAAAGTAAGGATTGAAATTTCATCAATGGTTATGTTTACTTATCTTTGATATAAATGTGATATTCAGGCGAATTAGTGATTTGAATGGATTAGAATATGCACCTTTGCCACAACTTGATAATATGCATTCGTTAAAAAATCTGTGAGTTGAATCCTCTGCTTCTTTCAGAAATAGAAAAGAAAAAAACAGCAAGAAAGGTACTCATAATATATTGTTGTATATCTTATTGTTTCACAGGATTTTGAGGAACTGCAACATCAACGGGGAACTAAATGATTATCTTGCGACTATAACAACATTAAAACACTTGTAATTCCTTACTCGTTACATTATATAGCTCTCCAGCCTAGTATGTTTCAGGAATATGTATCTATGACAACTTATTCTCAATATGATATATGTTTCAGAGACCTCAGCTTTAACAACTTAAGTGGAACTATTCCGAGTAGCTATGCTGAAGTGAGCGGTGCTAAATTCATGTACGAAATTCATCTTAGTATCTTAGTGCAATTTTTTTGGCGTATATTTTTAATCACGTATCTGTTGGCTACTTCACACCAACAACTCTGGTTTCAACTTTCAGTCTGAAATGGTATATCTGAATAATACTACTTAGATTCTTGAAGATTAAACTCAACCTAATGGAGCTCAAGTAGTCAAGACAAGTCGTGACCTTTAAGTAATTATATGGTTGCAATACTTTTAAGTGCTAGGAATATTTCAGCTTATAGTATTTTTATTGTGTATATTGACTGCACAAACATCTGTGATTGGATTTCGTTTCAAAAGGATTGCATGCCCTTTCAAACTGTAAAGGAAAAAATCAACGAGAAAGAAGGTGACAATATATGAAGTGTCAAAGTGATAAGTTTAGGATTTTTTGTTATTTCATTGTCTTAATTGGTTTTTACAAATTAAAAGACTTTTCTGTATAGAAGAGTTCCTCGAGTCAGTTACCAAAATCAATCCAATCCTTCACAGTGAAGAGAAAAACGGGTGTGATTAGCTTATTTCAATTAATGTTCACCTTGATAAATATTAAGCTTTGCATATTAATATCTTGATATACTTTTATGATAGATTTTTAACTGGGAACCTTCTCACCGGACTGGTGCCAGCTTGGAAAAAGAACATCGACGTGTAAGTTTTGTTCTAATACTACTTGTATGATTACTTTGATCGAACAAAGTACTTCATTTATCTTGCGATGATACTATGAACATATCATCCGTTTTTTCTTTTATGATTGTGCAATTGTTTACTGAAGATGTTAATATTCATAGGTTTCTTTGTAGTCACCAAATGTTTCATTAAGTCTCAGATTGTTGAATTATTATCATAATCTGAATCAAATTTTGATGACTTGTATATAGAGATATTTCATACAATAACTTAAGCATCAGCCAAGGGAGTCAGATATGTCAAAGTGATAAACTGTAAGAATCCTTGCATTTTTGTGCATTTGTTTTTGCAAACTTAAAAACATTTATGTGACAACACCTTTTCTAATATGTCGTAGGAACTTGTTTTCTCCCTCATTGGCACACAATAACATGTAAGTTTGGTCTTATAAAATACTAAAGCATGTATATATATACCCTTTCCAATTTCCTTTTATTATGTTTGAATCTTATTATACGAATCATGCTAACTTATTCCATTCCTTTCAGAGGAACAGTTTCGTGTTTGAGCGGCTGCCCCAAACGTGAGTTTCTTCATGCAGACTTTCCTATAGAGAGCCAAGATCTCACTGTTTTTTCATATTTTAAGTAAAAATAATTTAGAATTACAAGAGTAGAGGGTAAGCATGTTCTAGTAGGAGTTGTATCTTATCTTTCTACATTGGTACTGTATCAAATGATCTAGGCTAAAGTACAATTTATTCCACTGGTGTGTCCATATATGATAGATCACTCATTAATTTTTTAATTATCAAACTAATCTTGATTCTAAGGAAATGTTTCACACTAGAGTCATAGATGGAACTCAAAGAGTTTACTTCTAGGTTCCCTAAATTTACTTTGGGCAAACTATAATCAGGCTAGAGTTATCCAACCAAACTATAAACATGATAGTTAGAAAGAGAGGACTTTGTATGGAAAAATAAAATTTCAATGAATATATTTTTTCTTTATTTGATTTTCTTAGTTTCCTTAATATTTCTAAAGTTTCTCACATGATCTGCTCAACACAGCCTTGTACTCCCTTTATATAAATTGTGGTGGAAAGCAAGCAATAGTCAACAAAAAAAGTTATGATGATGATTCCGATTCATCTGGAGCAGCTAAATTCCATGTCAGTCCAACAGGAAATTGGGCATTTAGTACAACTGGTATGTTCATTGATGGTGATCAACTCGGAGAAACTTATTCCCCACCAAATAATGCTAGACTTACTATGGCGGACACTGAATTGTACATGGATGCACGTGTTTCTCCTATTTCGTTGACTTATTATGCGTTTTGTCTGGTAAATGGAAGCTACACAGTAAATCTACATTTTGCTGAAATAATGATCACCGATGATCAAACTTATGGTAGTCTTGGAAGACGTCTATTTGATATCTACCTTCAGGTACATGGTTTAACAATTTTATTTGAGTAGTCACTCGGTATTTCATAAAAAAGAAATTAAGGCTATTGATCAAGTGACACTAGAAACTAAAATACGAAAAATACAGAGAACTATTTTTTTCCAATTAAAATACGAAAAATATCTCACTAACAATTGAATTTTTGTTTCTGATTAACAGTTCACTTTTTCGGCATTATTTATAAAATCAAATTCTACAATATTTGTAAAACAAAATGATGATTAGAATATTTGTATGTTGTAATCATCATGAAGCATTAAGGTTGTGATTGAAATGTTGCAGGGAAAGCCGGTGCAAAAGGATTTCAATATTGCAGAAGAAGCAGGGGGAGTTGGTAAGAAAGTCGTAAAACCATTTAAAGATGTCATCGTTACTAGCAATACCTTGGAGATCCGTTTGTATTGGGCTGGAAAAGGGACACAGTCTCTCCCAAATAGATCAGTATACGGTCCTCTTATATCAGCTATATCAGTGGAATCTGGTGGGTTATGCTTTGTACGTTCTTGATCTTATAATATGATCTCCATGTAATGTTCTAACATTTAAAACTCTTGTATTATAATCAAACAGACTCTCCACCTGGAAGCATATCTGCAGGAGCTGTGGCTGGAATTGTGGTTGCAGCAACAGCTGTTATCATTCTAGTATTTGGTATACTTTGGTGGAAAGGATGTTTTGGAAACAAAAACTCATTAGCAAGAGGTGATTACAATAAAGAAAAACTGTTGGCGTTATTAATTGAAATTTTTGCACACAAATAAATTATTCAAGTGATAAAAAATAAACTTGCACGTGTTGTGTAACTGAGTAAGTTCTCGAGCATGTACTTTTGTTATAATATCATGATATCATGATATGTAACCTGAGGCTAGTTTTATCTTGATAAAAGAAAAGTTGCAAGCTTACAAGAAATGGATTCTTGATGTAGTTTTATCATGATATCATGAGATCTTTAATCTTTCTTTTACTTCAACTGGCAGAGCTAAATAGTTTAGATGTACAAACGGGTATATTTACCTTACGACAAATCAAATCAGCGACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGTATTTTGCATAATATAAAACAACAACTTAAGTGTCATGCTTTTATTATAATTTACATATATTTTTCAGGAAATTCTTTCTCAACTTCTAACAGCATATCATTCCTCAAAATGCAGGGAAGTTTACCAAATGGGACATTGATAGCAGTGAAGCAACTTTCTTCAAAATCAAAGCAAGGGAATCGTGAGTTTTTAAACGAGATAGGCATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTCCATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTAATATATGAATACTTGGAAAACAATAGTCTTGCTCGTGCTTTATTTGGTAATTTTTCCTTTATGCTACTTTGGGTTGCTATTCATGCGTTATTTCACATTTTCTAACTTAGGACATAACTAGTAGTATAATTGTCTGATTCTTATTATATCCACTAATAAAGGTCCAGAGGAACACCAAATAAAATTAGATTGGTCAACAAGGAAGAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCACGAAGAATCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCTACCAATGTGTTGCTTGATGCGAATCTCGACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGACGAGGAGGACAATACTCACATTAGCACTAGAATTGCTGGGACATAG
Protein sequence

>MS.gene94495.t1

USPQQSSNRFNTSGDCKYIYSDTVGFNGQSNVWKYFGGAWESNPDSNTETFLUQFYRRTTCDIGKAHYIARFPNUGQPILWKNTUFYSELDKYQYINHSRKWIKRTNSFSNFTFEIEISSMVMFTYLUYKCDIQANUUFEWIRICTFATTUUYAFVKKSDFEELQHQRGTKULSCDYNNIKTLRPQLUQLKWNYSEULCUSERCUIHIFNWEPSHRTGASLEKEHRRRYFIQULKHQPRESDMSKUUTELVFSLIGTQUHRNSFVFERLPQTLVLPLYKLWWKASNSQQKKLUUUFRFIWSSUIPCQSNRKLGIUYNWYVHUWUSTRRNLFPTKUCUTYYGGHUIVHGCTCFSYFVDLLCVLSGKWKLHSKSTFCUNNDHRUSNLWUSWKTSIUYLPSGKAGAKGFQYCRRSRGSWUESRKTIURCHRYUQYLGDPFVLGWKRDTVSPKUISIRSSYISYISGIULSTWKHICRSCGWNCGCSNSCYHSSIWYTLVERMFWKQKLISKRAKUFRCTNGYIYLTTNQISDKULUYFQUDWRRRIWSCVQGKFTKWDIDSSEATFFKIKARESUVFKRDRHDFCFATSLSCUTPWLLCGGRSVVANIUILGKQUSCSCFIWSRGTPNKIRLVNKEEDLCWYCURFGIPPRRIKTEGCSQGHQGYQCVAUCESRPKDIUFWFGQAURGGQYSHUHUNCWDI