Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94573.t1 | XP_003596717.1 | 98.9 | 274 | 3 | 0 | 1 | 274 | 45 | 318 | 1.40E-149 | 538.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94573.t1 | Q9FLC0 | 64.5 | 273 | 94 | 2 | 4 | 274 | 53 | 324 | 6.4e-95 | 348.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94573.t1 | G7IM82 | 98.9 | 274 | 3 | 0 | 1 | 274 | 45 | 318 | 1.0e-149 | 538.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049180 | MS.gene94573 | 0.811406 | 7.11E-51 | -1.69E-46 |
MS.gene050818 | MS.gene94573 | 0.809327 | 2.00E-50 | -1.69E-46 |
MS.gene054585 | MS.gene94573 | 0.809361 | 1.97E-50 | -1.69E-46 |
MS.gene060359 | MS.gene94573 | 0.836774 | 7.68E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94573.t1 | MTR_2g084020 | 98.905 | 274 | 3 | 0 | 1 | 274 | 45 | 318 | 0.0 | 557 |
MS.gene94573.t1 | MTR_2g084010 | 91.606 | 274 | 23 | 0 | 1 | 274 | 45 | 318 | 0.0 | 515 |
MS.gene94573.t1 | MTR_2g084000 | 84.307 | 274 | 43 | 0 | 1 | 274 | 46 | 319 | 4.71e-175 | 485 |
MS.gene94573.t1 | MTR_2g084080 | 84.672 | 274 | 41 | 1 | 1 | 274 | 45 | 317 | 9.61e-172 | 477 |
MS.gene94573.t1 | MTR_2g084110 | 83.577 | 274 | 44 | 1 | 1 | 274 | 45 | 317 | 3.27e-169 | 471 |
MS.gene94573.t1 | MTR_2g084090 | 78.182 | 275 | 58 | 2 | 1 | 274 | 45 | 318 | 1.48e-155 | 436 |
MS.gene94573.t1 | MTR_3g094650 | 70.330 | 273 | 78 | 3 | 4 | 274 | 51 | 322 | 5.23e-133 | 379 |
MS.gene94573.t1 | MTR_3g094670 | 71.429 | 273 | 75 | 3 | 4 | 274 | 51 | 322 | 7.88e-132 | 376 |
MS.gene94573.t1 | MTR_3g094630 | 68.116 | 276 | 85 | 2 | 1 | 274 | 48 | 322 | 2.65e-126 | 362 |
MS.gene94573.t1 | MTR_7g072510 | 62.774 | 274 | 101 | 1 | 1 | 274 | 40 | 312 | 5.75e-126 | 361 |
MS.gene94573.t1 | MTR_5g083860 | 65.201 | 273 | 92 | 3 | 4 | 274 | 54 | 325 | 2.08e-125 | 360 |
MS.gene94573.t1 | MTR_7g072480 | 60.886 | 271 | 105 | 1 | 4 | 274 | 47 | 316 | 6.38e-120 | 345 |
MS.gene94573.t1 | MTR_3g466200 | 59.854 | 274 | 106 | 3 | 4 | 274 | 48 | 320 | 3.17e-118 | 342 |
MS.gene94573.t1 | MTR_1g115900 | 60.073 | 273 | 106 | 2 | 4 | 274 | 50 | 321 | 1.49e-111 | 325 |
MS.gene94573.t1 | MTR_3g072190 | 59.779 | 271 | 108 | 1 | 4 | 274 | 49 | 318 | 1.92e-111 | 324 |
MS.gene94573.t1 | MTR_3g466180 | 62.362 | 271 | 101 | 1 | 4 | 274 | 54 | 323 | 4.61e-111 | 323 |
MS.gene94573.t1 | MTR_4g029170 | 59.341 | 273 | 108 | 3 | 4 | 274 | 50 | 321 | 4.92e-111 | 323 |
MS.gene94573.t1 | MTR_5g074970 | 58.909 | 275 | 108 | 3 | 4 | 274 | 53 | 326 | 1.89e-109 | 319 |
MS.gene94573.t1 | MTR_7g026990 | 57.565 | 271 | 113 | 2 | 4 | 274 | 54 | 322 | 2.59e-109 | 319 |
MS.gene94573.t1 | MTR_4g029180 | 57.509 | 273 | 113 | 3 | 4 | 274 | 50 | 321 | 8.22e-108 | 315 |
MS.gene94573.t1 | MTR_5g074760 | 58.273 | 278 | 111 | 4 | 1 | 274 | 45 | 321 | 9.59e-108 | 315 |
MS.gene94573.t1 | MTR_5g074860 | 58.029 | 274 | 110 | 4 | 4 | 273 | 52 | 324 | 1.59e-107 | 315 |
MS.gene94573.t1 | MTR_5g074740 | 58.273 | 278 | 111 | 4 | 1 | 274 | 45 | 321 | 1.73e-107 | 314 |
MS.gene94573.t1 | MTR_4g029200 | 54.745 | 274 | 123 | 1 | 1 | 274 | 66 | 338 | 4.47e-106 | 311 |
MS.gene94573.t1 | MTR_4g083710 | 56.364 | 275 | 116 | 2 | 4 | 274 | 50 | 324 | 4.87e-106 | 311 |
MS.gene94573.t1 | MTR_5g074710 | 58.273 | 278 | 111 | 5 | 1 | 274 | 45 | 321 | 1.53e-105 | 309 |
MS.gene94573.t1 | MTR_5g021060 | 53.381 | 281 | 124 | 1 | 1 | 274 | 50 | 330 | 2.13e-105 | 309 |
MS.gene94573.t1 | MTR_4g029190 | 55.072 | 276 | 121 | 2 | 1 | 274 | 66 | 340 | 1.07e-104 | 308 |
MS.gene94573.t1 | MTR_3g467600 | 54.348 | 276 | 122 | 3 | 3 | 274 | 49 | 324 | 1.22e-101 | 300 |
MS.gene94573.t1 | MTR_8g076820 | 51.246 | 281 | 130 | 1 | 1 | 274 | 50 | 330 | 7.47e-101 | 298 |
MS.gene94573.t1 | MTR_4g074995 | 54.182 | 275 | 109 | 3 | 4 | 274 | 47 | 308 | 8.05e-99 | 292 |
MS.gene94573.t1 | MTR_3g072190 | 57.371 | 251 | 106 | 1 | 24 | 274 | 2 | 251 | 1.86e-97 | 286 |
MS.gene94573.t1 | MTR_5g017860 | 53.191 | 282 | 122 | 4 | 1 | 274 | 47 | 326 | 1.65e-96 | 286 |
MS.gene94573.t1 | MTR_1g022970 | 52.837 | 282 | 125 | 2 | 1 | 274 | 66 | 347 | 1.70e-96 | 287 |
MS.gene94573.t1 | MTR_5g017850 | 53.763 | 279 | 119 | 4 | 4 | 274 | 50 | 326 | 1.37e-95 | 284 |
MS.gene94573.t1 | MTR_1g054205 | 50.177 | 283 | 132 | 3 | 1 | 274 | 44 | 326 | 5.73e-94 | 280 |
MS.gene94573.t1 | MTR_4g074990 | 52.000 | 275 | 112 | 3 | 4 | 274 | 47 | 305 | 5.45e-92 | 274 |
MS.gene94573.t1 | MTR_4g122640 | 48.387 | 279 | 139 | 1 | 1 | 274 | 58 | 336 | 7.17e-91 | 273 |
MS.gene94573.t1 | MTR_7g093370 | 48.057 | 283 | 138 | 3 | 1 | 274 | 89 | 371 | 3.16e-90 | 272 |
MS.gene94573.t1 | MTR_4g125940 | 50.000 | 284 | 130 | 3 | 1 | 274 | 48 | 329 | 1.03e-89 | 270 |
MS.gene94573.t1 | MTR_2g040000 | 50.000 | 282 | 128 | 3 | 4 | 274 | 52 | 331 | 3.46e-89 | 268 |
MS.gene94573.t1 | MTR_5g014100 | 49.296 | 284 | 130 | 3 | 4 | 274 | 49 | 331 | 7.04e-88 | 265 |
MS.gene94573.t1 | MTR_4g125940 | 50.182 | 275 | 125 | 3 | 10 | 274 | 2 | 274 | 4.12e-87 | 261 |
MS.gene94573.t1 | MTR_2g029860 | 47.518 | 282 | 140 | 2 | 1 | 274 | 49 | 330 | 1.04e-86 | 263 |
MS.gene94573.t1 | MTR_2g029815 | 48.727 | 275 | 133 | 2 | 8 | 274 | 56 | 330 | 5.26e-86 | 261 |
MS.gene94573.t1 | MTR_2g029750 | 47.163 | 282 | 141 | 2 | 1 | 274 | 49 | 330 | 2.24e-85 | 259 |
MS.gene94573.t1 | MTR_2g029830 | 46.809 | 282 | 142 | 2 | 1 | 274 | 48 | 329 | 7.47e-85 | 258 |
MS.gene94573.t1 | MTR_5g049280 | 45.614 | 285 | 144 | 5 | 1 | 274 | 53 | 337 | 2.75e-84 | 256 |
MS.gene94573.t1 | MTR_2g029740 | 46.809 | 282 | 142 | 2 | 1 | 274 | 49 | 330 | 9.78e-84 | 255 |
MS.gene94573.t1 | MTR_2g029850 | 48.000 | 275 | 135 | 2 | 8 | 274 | 56 | 330 | 2.32e-83 | 254 |
MS.gene94573.t1 | MTR_2g028980 | 48.364 | 275 | 134 | 2 | 8 | 274 | 56 | 330 | 2.62e-83 | 254 |
MS.gene94573.t1 | MTR_2g029560 | 46.182 | 275 | 140 | 2 | 8 | 274 | 51 | 325 | 5.16e-83 | 253 |
MS.gene94573.t1 | MTR_5g074860 | 50.000 | 274 | 93 | 6 | 4 | 273 | 52 | 285 | 6.92e-83 | 250 |
MS.gene94573.t1 | MTR_2g029800 | 48.000 | 275 | 135 | 2 | 8 | 274 | 56 | 330 | 7.89e-83 | 253 |
MS.gene94573.t1 | MTR_2g029820 | 46.545 | 275 | 139 | 2 | 8 | 274 | 56 | 330 | 8.73e-82 | 250 |
MS.gene94573.t1 | MTR_4g074980 | 47.794 | 272 | 116 | 3 | 4 | 274 | 48 | 294 | 1.02e-80 | 245 |
MS.gene94573.t1 | MTR_4g030890 | 46.619 | 281 | 139 | 4 | 1 | 274 | 120 | 396 | 3.20e-80 | 248 |
MS.gene94573.t1 | MTR_2g029910 | 47.101 | 276 | 137 | 3 | 8 | 274 | 57 | 332 | 3.95e-80 | 246 |
MS.gene94573.t1 | MTR_3g092990 | 44.286 | 280 | 147 | 3 | 3 | 274 | 48 | 326 | 5.38e-79 | 242 |
MS.gene94573.t1 | MTR_2g029730 | 44.681 | 282 | 148 | 2 | 1 | 274 | 45 | 326 | 2.99e-78 | 241 |
MS.gene94573.t1 | MTR_2g029830 | 46.875 | 256 | 128 | 2 | 27 | 274 | 6 | 261 | 1.29e-75 | 232 |
MS.gene94573.t1 | MTR_4g074980 | 54.854 | 206 | 89 | 2 | 4 | 205 | 48 | 253 | 1.45e-75 | 231 |
MS.gene94573.t1 | MTR_4g031140 | 43.416 | 281 | 148 | 4 | 1 | 274 | 48 | 324 | 2.09e-75 | 233 |
MS.gene94573.t1 | MTR_0155s0040 | 42.182 | 275 | 152 | 6 | 1 | 274 | 47 | 315 | 9.22e-75 | 231 |
MS.gene94573.t1 | MTR_2g088770 | 43.728 | 279 | 145 | 6 | 5 | 274 | 50 | 325 | 5.95e-70 | 219 |
MS.gene94573.t1 | MTR_3g092990 | 44.531 | 256 | 133 | 3 | 27 | 274 | 61 | 315 | 2.59e-69 | 217 |
MS.gene94573.t1 | MTR_4g046713 | 42.446 | 278 | 150 | 4 | 5 | 274 | 51 | 326 | 3.55e-69 | 217 |
MS.gene94573.t1 | MTR_7g086820 | 40.283 | 283 | 150 | 5 | 1 | 274 | 40 | 312 | 2.91e-68 | 214 |
MS.gene94573.t1 | MTR_2g008710 | 42.705 | 281 | 144 | 6 | 5 | 274 | 51 | 325 | 1.11e-67 | 213 |
MS.gene94573.t1 | MTR_1g101830 | 41.304 | 276 | 148 | 7 | 7 | 274 | 53 | 322 | 2.81e-67 | 212 |
MS.gene94573.t1 | MTR_1g009750 | 43.494 | 269 | 140 | 5 | 16 | 274 | 62 | 328 | 1.77e-66 | 210 |
MS.gene94573.t1 | MTR_7g107520 | 42.294 | 279 | 149 | 4 | 3 | 274 | 47 | 320 | 6.73e-66 | 208 |
MS.gene94573.t1 | MTR_4g114210 | 42.199 | 282 | 145 | 6 | 5 | 274 | 45 | 320 | 1.42e-65 | 207 |
MS.gene94573.t1 | MTR_6g027440 | 43.123 | 269 | 143 | 6 | 11 | 274 | 51 | 314 | 1.44e-65 | 207 |
MS.gene94573.t1 | MTR_8g075100 | 40.357 | 280 | 149 | 6 | 4 | 274 | 49 | 319 | 1.64e-65 | 207 |
MS.gene94573.t1 | MTR_5g074700 | 49.339 | 227 | 96 | 5 | 52 | 274 | 3 | 214 | 2.10e-65 | 203 |
MS.gene94573.t1 | MTR_1g077000 | 41.026 | 273 | 154 | 6 | 3 | 274 | 61 | 327 | 2.27e-65 | 207 |
MS.gene94573.t1 | MTR_1g025980 | 41.637 | 281 | 145 | 8 | 3 | 273 | 46 | 317 | 2.92e-65 | 206 |
MS.gene94573.t1 | MTR_5g022870 | 40.636 | 283 | 150 | 6 | 1 | 274 | 43 | 316 | 3.57e-65 | 206 |
MS.gene94573.t1 | MTR_1g086320 | 40.909 | 286 | 155 | 5 | 1 | 274 | 50 | 333 | 1.02e-64 | 206 |
MS.gene94573.t1 | MTR_7g086870 | 39.855 | 276 | 158 | 6 | 1 | 274 | 42 | 311 | 8.14e-64 | 202 |
MS.gene94573.t1 | MTR_1g038680 | 40.767 | 287 | 154 | 6 | 1 | 274 | 49 | 332 | 1.27e-62 | 200 |
MS.gene94573.t1 | MTR_7g029030 | 40.824 | 267 | 152 | 4 | 12 | 274 | 56 | 320 | 7.26e-62 | 198 |
MS.gene94573.t1 | MTR_5g016010 | 41.045 | 268 | 147 | 4 | 16 | 273 | 62 | 328 | 1.52e-61 | 197 |
MS.gene94573.t1 | MTR_3g072210 | 54.595 | 185 | 83 | 1 | 91 | 274 | 54 | 238 | 6.69e-61 | 192 |
MS.gene94573.t1 | MTR_4g087965 | 41.758 | 273 | 146 | 7 | 12 | 272 | 73 | 344 | 1.07e-60 | 196 |
MS.gene94573.t1 | MTR_2g437770 | 38.652 | 282 | 155 | 7 | 1 | 274 | 70 | 341 | 7.36e-60 | 193 |
MS.gene94573.t1 | MTR_4g133800 | 39.209 | 278 | 152 | 7 | 5 | 274 | 65 | 333 | 7.52e-60 | 193 |
MS.gene94573.t1 | MTR_1g086490 | 39.384 | 292 | 158 | 5 | 1 | 274 | 50 | 340 | 1.89e-59 | 192 |
MS.gene94573.t1 | MTR_6g043280 | 40.647 | 278 | 155 | 7 | 1 | 274 | 61 | 332 | 3.56e-59 | 191 |
MS.gene94573.t1 | MTR_4g095450 | 40.304 | 263 | 151 | 4 | 16 | 273 | 62 | 323 | 1.22e-56 | 184 |
MS.gene94573.t1 | MTR_4g127670 | 41.132 | 265 | 142 | 5 | 16 | 270 | 59 | 319 | 2.88e-56 | 184 |
MS.gene94573.t1 | MTR_1g090760 | 38.148 | 270 | 156 | 5 | 15 | 274 | 62 | 330 | 2.58e-55 | 181 |
MS.gene94573.t1 | MTR_7g072490 | 41.079 | 241 | 87 | 3 | 27 | 267 | 2 | 187 | 3.76e-55 | 177 |
MS.gene94573.t1 | MTR_2g008160 | 40.580 | 276 | 144 | 9 | 12 | 274 | 55 | 323 | 9.56e-55 | 179 |
MS.gene94573.t1 | MTR_2g077990 | 36.842 | 304 | 150 | 9 | 11 | 274 | 106 | 407 | 8.28e-54 | 179 |
MS.gene94573.t1 | MTR_2g008730 | 43.210 | 243 | 124 | 5 | 43 | 274 | 62 | 301 | 8.74e-54 | 176 |
MS.gene94573.t1 | MTR_1g066710 | 35.401 | 274 | 170 | 4 | 6 | 274 | 52 | 323 | 1.01e-53 | 177 |
MS.gene94573.t1 | MTR_2g078610 | 35.644 | 303 | 155 | 7 | 11 | 274 | 106 | 407 | 4.04e-53 | 178 |
MS.gene94573.t1 | MTR_2g067440 | 34.839 | 310 | 162 | 7 | 1 | 273 | 80 | 386 | 9.97e-53 | 176 |
MS.gene94573.t1 | MTR_2g099175 | 36.655 | 281 | 160 | 6 | 6 | 274 | 61 | 335 | 2.36e-52 | 174 |
MS.gene94573.t1 | MTR_4g132490 | 34.307 | 274 | 171 | 4 | 8 | 274 | 56 | 327 | 2.42e-52 | 174 |
MS.gene94573.t1 | MTR_6g043240 | 38.267 | 277 | 161 | 7 | 1 | 274 | 62 | 331 | 4.01e-52 | 174 |
MS.gene94573.t1 | MTR_1g066640 | 35.125 | 279 | 174 | 4 | 1 | 274 | 47 | 323 | 1.04e-51 | 172 |
MS.gene94573.t1 | MTR_1g009750 | 37.828 | 267 | 141 | 6 | 16 | 274 | 62 | 311 | 1.60e-51 | 171 |
MS.gene94573.t1 | MTR_0286s0010 | 36.364 | 275 | 158 | 6 | 12 | 274 | 65 | 334 | 1.83e-51 | 171 |
MS.gene94573.t1 | MTR_6g008075 | 36.364 | 275 | 158 | 6 | 12 | 274 | 65 | 334 | 1.83e-51 | 171 |
MS.gene94573.t1 | MTR_6g043460 | 39.147 | 258 | 152 | 5 | 15 | 270 | 70 | 324 | 4.48e-51 | 171 |
MS.gene94573.t1 | MTR_1g066380 | 34.307 | 274 | 173 | 4 | 6 | 274 | 52 | 323 | 3.61e-50 | 168 |
MS.gene94573.t1 | MTR_3g105790 | 37.410 | 278 | 160 | 3 | 6 | 274 | 50 | 322 | 4.13e-50 | 167 |
MS.gene94573.t1 | MTR_1g066680 | 35.273 | 275 | 167 | 5 | 7 | 274 | 52 | 322 | 2.83e-49 | 166 |
MS.gene94573.t1 | MTR_8g062780 | 36.194 | 268 | 161 | 5 | 16 | 274 | 58 | 324 | 5.57e-48 | 162 |
MS.gene94573.t1 | MTR_2g078280 | 35.986 | 289 | 144 | 8 | 11 | 260 | 106 | 392 | 7.17e-48 | 164 |
MS.gene94573.t1 | MTR_5g033470 | 35.587 | 281 | 154 | 7 | 13 | 274 | 105 | 377 | 9.72e-47 | 160 |
MS.gene94573.t1 | MTR_2g067450 | 36.742 | 264 | 154 | 6 | 20 | 273 | 49 | 309 | 6.27e-46 | 156 |
MS.gene94573.t1 | MTR_4g132110 | 34.962 | 266 | 166 | 4 | 14 | 274 | 65 | 328 | 1.26e-45 | 156 |
MS.gene94573.t1 | MTR_1g066380 | 33.725 | 255 | 162 | 4 | 25 | 274 | 3 | 255 | 1.20e-44 | 152 |
MS.gene94573.t1 | MTR_4g132110 | 34.317 | 271 | 166 | 5 | 14 | 274 | 65 | 333 | 1.98e-43 | 150 |
MS.gene94573.t1 | MTR_0147s0010 | 32.180 | 289 | 150 | 6 | 14 | 273 | 110 | 381 | 3.80e-43 | 151 |
MS.gene94573.t1 | MTR_2g008160 | 36.803 | 269 | 127 | 9 | 13 | 274 | 56 | 288 | 2.39e-41 | 144 |
MS.gene94573.t1 | MTR_2g029880 | 38.776 | 196 | 102 | 4 | 87 | 274 | 3 | 188 | 1.30e-39 | 137 |
MS.gene94573.t1 | MTR_3g105790 | 36.667 | 240 | 142 | 2 | 44 | 274 | 8 | 246 | 4.20e-39 | 137 |
MS.gene94573.t1 | MTR_3g072260 | 69.318 | 88 | 27 | 0 | 1 | 88 | 46 | 133 | 4.53e-37 | 128 |
MS.gene94573.t1 | MTR_2g008160 | 48.921 | 139 | 67 | 3 | 12 | 150 | 55 | 189 | 7.02e-36 | 127 |
MS.gene94573.t1 | MTR_2g077980 | 32.014 | 278 | 140 | 11 | 43 | 274 | 11 | 285 | 2.07e-25 | 102 |
MS.gene94573.t1 | MTR_7g086790 | 42.500 | 120 | 65 | 2 | 28 | 147 | 17 | 132 | 3.90e-25 | 99.4 |
MS.gene94573.t1 | MTR_3g462850 | 41.096 | 146 | 73 | 7 | 141 | 274 | 5 | 149 | 1.26e-24 | 96.7 |
MS.gene94573.t1 | MTR_5g074770 | 50.000 | 90 | 43 | 2 | 185 | 273 | 20 | 108 | 1.31e-22 | 90.1 |
MS.gene94573.t1 | MTR_2g078560 | 28.571 | 217 | 116 | 5 | 92 | 270 | 101 | 316 | 1.53e-21 | 92.4 |
MS.gene94573.t1 | MTR_4g114220 | 49.412 | 85 | 33 | 2 | 6 | 90 | 28 | 102 | 1.26e-18 | 80.5 |
MS.gene94573.t1 | MTR_4g031040 | 33.537 | 164 | 72 | 3 | 42 | 205 | 3 | 129 | 1.95e-18 | 79.7 |
MS.gene94573.t1 | MTR_5g058120 | 33.974 | 156 | 94 | 4 | 117 | 270 | 7 | 155 | 1.70e-17 | 80.1 |
MS.gene94573.t1 | MTR_6g048160 | 52.778 | 72 | 30 | 2 | 20 | 91 | 22 | 89 | 3.30e-17 | 75.1 |
MS.gene94573.t1 | MTR_1g089005 | 49.398 | 83 | 35 | 2 | 11 | 87 | 45 | 126 | 6.50e-14 | 68.2 |
MS.gene94573.t1 | MTR_1g098320 | 44.304 | 79 | 43 | 1 | 196 | 274 | 47 | 124 | 9.33e-14 | 67.4 |
MS.gene94573.t1 | MTR_7g107500 | 43.529 | 85 | 46 | 1 | 190 | 274 | 15 | 97 | 3.45e-13 | 64.7 |
MS.gene94573.t1 | MTR_7g086785 | 29.545 | 132 | 92 | 1 | 27 | 158 | 4 | 134 | 1.03e-12 | 64.3 |
MS.gene94573.t1 | MTR_2g029930 | 45.070 | 71 | 25 | 2 | 8 | 64 | 32 | 102 | 1.05e-11 | 60.8 |
MS.gene94573.t1 | MTR_7g086810 | 33.333 | 99 | 40 | 1 | 1 | 99 | 26 | 98 | 1.36e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94573.t1 | AT5G05340 | 63.768 | 276 | 97 | 2 | 1 | 274 | 50 | 324 | 7.22e-126 | 361 |
MS.gene94573.t1 | AT5G58400 | 58.845 | 277 | 110 | 3 | 1 | 274 | 50 | 325 | 3.13e-109 | 319 |
MS.gene94573.t1 | AT5G58390 | 60.741 | 270 | 102 | 4 | 8 | 274 | 48 | 316 | 7.30e-108 | 315 |
MS.gene94573.t1 | AT1G14550 | 53.846 | 273 | 124 | 2 | 4 | 274 | 49 | 321 | 1.48e-101 | 299 |
MS.gene94573.t1 | AT4G36430 | 50.178 | 281 | 133 | 1 | 1 | 274 | 50 | 330 | 1.94e-101 | 299 |
MS.gene94573.t1 | AT5G66390 | 51.601 | 281 | 129 | 1 | 1 | 274 | 53 | 333 | 9.82e-101 | 298 |
MS.gene94573.t1 | AT1G44970 | 54.610 | 282 | 120 | 2 | 1 | 274 | 65 | 346 | 1.05e-99 | 295 |
MS.gene94573.t1 | AT3G50990 | 52.158 | 278 | 126 | 1 | 4 | 274 | 64 | 341 | 8.24e-99 | 293 |
MS.gene94573.t1 | AT2G18150 | 49.466 | 281 | 135 | 1 | 1 | 274 | 56 | 336 | 2.33e-98 | 292 |
MS.gene94573.t1 | AT2G18140 | 49.466 | 281 | 135 | 1 | 1 | 274 | 55 | 335 | 2.71e-98 | 291 |
MS.gene94573.t1 | AT1G14540 | 50.735 | 272 | 133 | 1 | 4 | 274 | 44 | 315 | 8.80e-95 | 282 |
MS.gene94573.t1 | AT5G06720 | 48.936 | 282 | 136 | 2 | 1 | 274 | 52 | 333 | 9.74e-94 | 280 |
MS.gene94573.t1 | AT1G49570 | 51.439 | 278 | 124 | 4 | 3 | 270 | 70 | 346 | 8.74e-92 | 275 |
MS.gene94573.t1 | AT5G06730 | 46.809 | 282 | 142 | 2 | 1 | 274 | 53 | 334 | 2.43e-90 | 272 |
MS.gene94573.t1 | AT4G08780 | 49.474 | 285 | 132 | 5 | 1 | 274 | 44 | 327 | 4.71e-90 | 271 |
MS.gene94573.t1 | AT2G38390 | 47.350 | 283 | 140 | 3 | 1 | 274 | 51 | 333 | 1.60e-88 | 267 |
MS.gene94573.t1 | AT4G08770 | 47.887 | 284 | 138 | 3 | 1 | 274 | 44 | 327 | 8.31e-88 | 265 |
MS.gene94573.t1 | AT4G16270 | 49.091 | 275 | 131 | 3 | 7 | 274 | 76 | 348 | 3.40e-87 | 264 |
MS.gene94573.t1 | AT3G32980 | 47.183 | 284 | 140 | 3 | 1 | 274 | 51 | 334 | 3.20e-86 | 261 |
MS.gene94573.t1 | AT2G38380 | 46.290 | 283 | 143 | 3 | 1 | 274 | 51 | 333 | 7.10e-84 | 255 |
MS.gene94573.t1 | AT2G35380 | 48.239 | 284 | 133 | 4 | 4 | 274 | 53 | 335 | 3.76e-83 | 253 |
MS.gene94573.t1 | AT3G49120 | 46.831 | 284 | 141 | 3 | 1 | 274 | 52 | 335 | 1.42e-82 | 252 |
MS.gene94573.t1 | AT5G19890 | 49.110 | 281 | 127 | 5 | 4 | 274 | 53 | 327 | 4.16e-82 | 250 |
MS.gene94573.t1 | AT3G49110 | 46.127 | 284 | 143 | 3 | 1 | 274 | 53 | 336 | 5.45e-82 | 251 |
MS.gene94573.t1 | AT1G68850 | 42.857 | 287 | 150 | 6 | 1 | 274 | 50 | 335 | 3.44e-81 | 248 |
MS.gene94573.t1 | AT2G22420 | 43.416 | 281 | 148 | 4 | 1 | 274 | 43 | 319 | 1.30e-76 | 236 |
MS.gene94573.t1 | AT5G19880 | 44.755 | 286 | 145 | 5 | 1 | 274 | 45 | 329 | 3.54e-74 | 230 |
MS.gene94573.t1 | AT3G03670 | 43.796 | 274 | 145 | 3 | 8 | 274 | 50 | 321 | 1.63e-71 | 223 |
MS.gene94573.t1 | AT5G15180 | 40.860 | 279 | 155 | 4 | 3 | 274 | 54 | 329 | 6.73e-70 | 219 |
MS.gene94573.t1 | AT5G64120 | 44.765 | 277 | 141 | 5 | 4 | 274 | 58 | 328 | 6.90e-70 | 219 |
MS.gene94573.t1 | AT5G17820 | 43.542 | 271 | 135 | 6 | 11 | 274 | 54 | 313 | 9.58e-70 | 218 |
MS.gene94573.t1 | AT1G05260 | 40.071 | 282 | 159 | 4 | 1 | 274 | 46 | 325 | 2.46e-69 | 217 |
MS.gene94573.t1 | AT5G17820 | 43.542 | 271 | 135 | 6 | 11 | 274 | 107 | 366 | 1.01e-68 | 217 |
MS.gene94573.t1 | AT4G11290 | 39.716 | 282 | 162 | 2 | 1 | 274 | 45 | 326 | 2.90e-68 | 214 |
MS.gene94573.t1 | AT2G35380 | 47.755 | 245 | 114 | 4 | 43 | 274 | 4 | 247 | 7.56e-68 | 211 |
MS.gene94573.t1 | AT5G42180 | 41.071 | 280 | 152 | 5 | 1 | 273 | 43 | 316 | 2.39e-67 | 212 |
MS.gene94573.t1 | AT1G05240 | 40.210 | 286 | 151 | 6 | 2 | 274 | 47 | 325 | 5.00e-67 | 211 |
MS.gene94573.t1 | AT1G05250 | 40.210 | 286 | 151 | 6 | 2 | 274 | 47 | 325 | 5.00e-67 | 211 |
MS.gene94573.t1 | AT3G01190 | 42.500 | 280 | 145 | 7 | 4 | 274 | 49 | 321 | 9.50e-66 | 208 |
MS.gene94573.t1 | AT3G21770 | 38.686 | 274 | 158 | 4 | 5 | 270 | 53 | 324 | 5.06e-64 | 204 |
MS.gene94573.t1 | AT2G41480 | 41.489 | 282 | 147 | 7 | 5 | 274 | 53 | 328 | 6.95e-64 | 203 |
MS.gene94573.t1 | AT5G14130 | 42.066 | 271 | 138 | 6 | 16 | 274 | 67 | 330 | 1.04e-63 | 203 |
MS.gene94573.t1 | AT5G14130 | 42.066 | 271 | 138 | 6 | 16 | 274 | 108 | 371 | 2.65e-63 | 203 |
MS.gene94573.t1 | AT1G71695 | 41.606 | 274 | 154 | 5 | 1 | 270 | 64 | 335 | 6.32e-63 | 202 |
MS.gene94573.t1 | AT5G40150 | 40.824 | 267 | 153 | 4 | 12 | 274 | 63 | 328 | 9.67e-63 | 200 |
MS.gene94573.t1 | AT3G28200 | 40.977 | 266 | 153 | 4 | 12 | 274 | 52 | 316 | 1.30e-62 | 200 |
MS.gene94573.t1 | AT5G64110 | 43.866 | 269 | 136 | 5 | 15 | 274 | 68 | 330 | 7.28e-62 | 198 |
MS.gene94573.t1 | AT4G33420 | 40.441 | 272 | 155 | 6 | 4 | 274 | 60 | 325 | 1.07e-61 | 197 |
MS.gene94573.t1 | AT4G26010 | 41.353 | 266 | 146 | 7 | 11 | 274 | 52 | 309 | 1.39e-61 | 197 |
MS.gene94573.t1 | AT5G51890 | 40.580 | 276 | 149 | 7 | 8 | 274 | 53 | 322 | 1.69e-61 | 197 |
MS.gene94573.t1 | AT4G26010 | 41.353 | 266 | 146 | 7 | 11 | 274 | 80 | 337 | 2.01e-61 | 197 |
MS.gene94573.t1 | AT4G30170 | 41.636 | 269 | 142 | 6 | 16 | 274 | 62 | 325 | 2.69e-61 | 197 |
MS.gene94573.t1 | AT4G33420 | 40.441 | 272 | 155 | 6 | 4 | 274 | 107 | 372 | 4.44e-61 | 197 |
MS.gene94573.t1 | AT4G37530 | 40.149 | 269 | 150 | 4 | 16 | 274 | 62 | 329 | 3.14e-60 | 194 |
MS.gene94573.t1 | AT5G39580 | 41.818 | 275 | 147 | 6 | 7 | 274 | 51 | 319 | 1.51e-59 | 192 |
MS.gene94573.t1 | AT2G18980 | 41.852 | 270 | 140 | 7 | 16 | 274 | 60 | 323 | 2.64e-59 | 191 |
MS.gene94573.t1 | AT5G64100 | 42.007 | 269 | 139 | 6 | 15 | 274 | 71 | 331 | 7.62e-59 | 191 |
MS.gene94573.t1 | AT1G30870 | 38.182 | 275 | 151 | 7 | 6 | 270 | 76 | 341 | 2.70e-58 | 189 |
MS.gene94573.t1 | AT4G33870 | 34.539 | 304 | 151 | 7 | 11 | 270 | 98 | 397 | 7.87e-58 | 190 |
MS.gene94573.t1 | AT4G37520 | 38.491 | 265 | 152 | 4 | 16 | 270 | 62 | 325 | 2.14e-57 | 187 |
MS.gene94573.t1 | AT2G34060 | 40.520 | 269 | 147 | 6 | 16 | 272 | 77 | 344 | 9.84e-57 | 186 |
MS.gene94573.t1 | AT2G39040 | 39.236 | 288 | 158 | 7 | 1 | 274 | 66 | 350 | 2.47e-56 | 184 |
MS.gene94573.t1 | AT5G67400 | 38.491 | 265 | 152 | 4 | 16 | 270 | 62 | 325 | 2.56e-56 | 184 |
MS.gene94573.t1 | AT4G25980 | 39.636 | 275 | 147 | 8 | 13 | 274 | 58 | 326 | 5.13e-56 | 183 |
MS.gene94573.t1 | AT4G17690 | 35.971 | 278 | 173 | 4 | 1 | 274 | 46 | 322 | 1.57e-55 | 182 |
MS.gene94573.t1 | AT1G34510 | 39.245 | 265 | 153 | 6 | 11 | 274 | 52 | 309 | 1.67e-55 | 181 |
MS.gene94573.t1 | AT3G49960 | 39.033 | 269 | 153 | 4 | 16 | 274 | 62 | 329 | 2.61e-55 | 181 |
MS.gene94573.t1 | AT4G37520 | 38.113 | 265 | 150 | 5 | 16 | 270 | 62 | 322 | 3.83e-55 | 181 |
MS.gene94573.t1 | AT1G77100 | 39.858 | 281 | 157 | 9 | 1 | 274 | 44 | 319 | 5.98e-55 | 180 |
MS.gene94573.t1 | AT4G31760 | 35.714 | 280 | 166 | 3 | 4 | 274 | 52 | 326 | 1.04e-53 | 177 |
MS.gene94573.t1 | AT5G24070 | 36.364 | 286 | 163 | 6 | 1 | 274 | 57 | 335 | 9.68e-53 | 175 |
MS.gene94573.t1 | AT2G24800 | 35.664 | 286 | 159 | 5 | 4 | 274 | 54 | 329 | 3.61e-52 | 173 |
MS.gene94573.t1 | AT1G24110 | 37.313 | 268 | 157 | 5 | 16 | 274 | 57 | 322 | 5.40e-52 | 172 |
MS.gene94573.t1 | AT2G43480 | 35.816 | 282 | 160 | 7 | 6 | 274 | 62 | 335 | 3.69e-51 | 171 |
MS.gene94573.t1 | AT5G47000 | 35.821 | 268 | 166 | 4 | 12 | 274 | 64 | 330 | 4.51e-51 | 171 |
MS.gene94573.t1 | AT4G37530 | 42.396 | 217 | 115 | 3 | 16 | 222 | 62 | 278 | 5.20e-51 | 169 |
MS.gene94573.t1 | AT5G22410 | 37.367 | 281 | 156 | 9 | 3 | 271 | 50 | 322 | 5.70e-51 | 170 |
MS.gene94573.t1 | AT3G17070 | 37.050 | 278 | 151 | 9 | 13 | 274 | 70 | 339 | 8.45e-49 | 165 |
MS.gene94573.t1 | AT2G37130 | 35.424 | 271 | 163 | 6 | 12 | 274 | 30 | 296 | 2.63e-48 | 162 |
MS.gene94573.t1 | AT2G37130 | 35.424 | 271 | 163 | 6 | 12 | 274 | 61 | 327 | 6.87e-48 | 162 |
MS.gene94573.t1 | AT4G21960 | 34.211 | 266 | 168 | 4 | 14 | 274 | 64 | 327 | 2.63e-47 | 160 |
MS.gene94573.t1 | AT3G17070 | 35.821 | 268 | 147 | 10 | 23 | 274 | 18 | 276 | 5.43e-42 | 145 |
MS.gene94573.t1 | AT4G25980 | 47.826 | 138 | 68 | 3 | 11 | 148 | 101 | 234 | 9.11e-36 | 129 |
MS.gene94573.t1 | AT5G39580 | 41.143 | 175 | 94 | 4 | 7 | 181 | 51 | 216 | 9.21e-35 | 125 |
MS.gene94573.t1 | AT2G24800 | 39.752 | 161 | 91 | 2 | 4 | 162 | 54 | 210 | 7.16e-33 | 120 |
MS.gene94573.t1 | AT3G42570 | 37.634 | 93 | 57 | 1 | 57 | 148 | 57 | 149 | 5.49e-15 | 70.9 |
MS.gene94573.t1 | AT4G35970 | 26.482 | 253 | 130 | 9 | 15 | 256 | 33 | 240 | 2.83e-13 | 68.6 |
MS.gene94573.t1 | AT4G35970 | 27.727 | 220 | 104 | 8 | 15 | 223 | 33 | 208 | 3.65e-11 | 62.0 |
Find 46 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGACCTTACTGTCCTTTC+TGG | 0.161088 | 2.4:+15531776 | MS.gene94573:CDS |
TTCTGGTGGTGACATAAATT+TGG | 0.222257 | 2.4:+15531907 | MS.gene94573:CDS |
GATGACACTGCTACCTTTAC+CGG | 0.263088 | 2.4:+15530280 | MS.gene94573:CDS |
TGTTGGTTCTCAAGTTTCTT+TGG | 0.288110 | 2.4:+15532033 | MS.gene94573:CDS |
CAGAAGATGGTCCAGGGATT+TGG | 0.307170 | 2.4:-15531706 | None:intergenic |
AGTCCTCTAACTGGGACTAA+TGG | 0.328102 | 2.4:+15532130 | MS.gene94573:CDS |
AATGACCTTGTTGCTAATAA+AGG | 0.329690 | 2.4:+15531977 | MS.gene94573:CDS |
AAATCAAATTGTCCTACTTC+TGG | 0.333770 | 2.4:+15531890 | MS.gene94573:CDS |
TTGTGATGGATCAATCTTAT+TGG | 0.342695 | 2.4:+15530258 | MS.gene94573:CDS |
GTCCTCTAACTGGGACTAAT+GGG | 0.358033 | 2.4:+15532131 | MS.gene94573:CDS |
AGTAGAATTAGTCCTCTAAC+TGG | 0.369986 | 2.4:+15532121 | MS.gene94573:CDS |
GTTCTCAAGTTTCTTTGGTT+AGG | 0.371031 | 2.4:+15532038 | MS.gene94573:CDS |
TCCCCATTAGTCCCAGTTAG+AGG | 0.372964 | 2.4:-15532133 | None:intergenic |
AGCTTCATTATTGATAGCTT+TGG | 0.373071 | 2.4:-15530098 | None:intergenic |
ATCAATAATGAAGCTCGAAT+TGG | 0.383740 | 2.4:+15530106 | MS.gene94573:CDS |
TAATTGTTGTCAAAAGTAAC+TGG | 0.409448 | 2.4:-15531950 | None:intergenic |
GGGAGATTAGAAAGAATTGC+AGG | 0.441402 | 2.4:+15532152 | MS.gene94573:CDS |
TTACATTTACAAAGCAATCA+TGG | 0.442899 | 2.4:-15530153 | None:intergenic |
AAGAGACTTTGCAGCTGCTA+TGG | 0.475794 | 2.4:+15532090 | MS.gene94573:CDS |
GATAGGTCAGAAGATGGTCC+AGG | 0.491263 | 2.4:-15531713 | None:intergenic |
TTGACATTCTGCTTGACCTA+TGG | 0.493071 | 2.4:-15531807 | None:intergenic |
CTAGCACTTGCAACTAGAGA+TGG | 0.521717 | 2.4:+15530415 | MS.gene94573:CDS |
AACTAGAGATGGAATTGCTC+TGG | 0.526745 | 2.4:+15530426 | MS.gene94573:CDS |
GCAGCAAACAGCCAAATCCC+TGG | 0.526990 | 2.4:+15531695 | MS.gene94573:CDS |
CTTGCATCTCTTCTTCCAAG+TGG | 0.553652 | 2.4:-15531656 | None:intergenic |
TGCAAAGTTTGTGTCAATGT+TGG | 0.554512 | 2.4:-15531858 | None:intergenic |
CTTTCTGGTGCACACACCAT+AGG | 0.556404 | 2.4:+15531791 | MS.gene94573:CDS |
TCAAATTGTCCTACTTCTGG+TGG | 0.566583 | 2.4:+15531893 | MS.gene94573:CDS |
CCAAGTGGTACTACCCATGT+TGG | 0.572648 | 2.4:-15531641 | None:intergenic |
CCAACATGGGTAGTACCACT+TGG | 0.573801 | 2.4:+15531641 | MS.gene94573:CDS |
TGTAGCTTGGAGGACCAACA+TGG | 0.577701 | 2.4:+15531627 | MS.gene94573:intron |
TAGACCTTTGTTTCTAAACA+TGG | 0.579085 | 2.4:-15531747 | None:intergenic |
TTTATGTCACCACCAGAAGT+AGG | 0.583827 | 2.4:-15531902 | None:intergenic |
ACATGGTAGTGAGTGTGGAT+AGG | 0.587508 | 2.4:-15531730 | None:intergenic |
ACTACCATGTTTAGAAACAA+AGG | 0.599660 | 2.4:+15531743 | MS.gene94573:CDS |
GTGCACCAGAAAGGACAGTA+AGG | 0.606249 | 2.4:-15531781 | None:intergenic |
AGTGTGGATAGGTCAGAAGA+TGG | 0.621043 | 2.4:-15531719 | None:intergenic |
TCTAAACATGGTAGTGAGTG+TGG | 0.630401 | 2.4:-15531735 | None:intergenic |
GTAGAATTAGTCCTCTAACT+GGG | 0.630567 | 2.4:+15532122 | MS.gene94573:CDS |
GAAGTCCTTTATTAGCAACA+AGG | 0.654884 | 2.4:-15531982 | None:intergenic |
TCCTCTAACTGGGACTAATG+GGG | 0.661630 | 2.4:+15532132 | MS.gene94573:CDS |
CTATGGTGTGTGCACCAGAA+AGG | 0.672627 | 2.4:-15531790 | None:intergenic |
ATAGGTCAGAAGATGGTCCA+GGG | 0.677432 | 2.4:-15531712 | None:intergenic |
AATATCAGCACAAGAGACAG+TGG | 0.690128 | 2.4:-15530392 | None:intergenic |
ACTGGAGAGACAGAATCAAG+AGG | 0.693800 | 2.4:-15531932 | None:intergenic |
GTAGCTTGGAGGACCAACAT+GGG | 0.713947 | 2.4:+15531628 | MS.gene94573:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAATTAGAGAAATTTAT+TGG | - | chr2.4:15531396-15531415 | None:intergenic | 10.0% |
!! | CTACATTAAATAAAATAAAT+CGG | - | chr2.4:15531133-15531152 | None:intergenic | 10.0% |
!! | AAAATACATCACATAATATA+TGG | + | chr2.4:15530917-15530936 | MS.gene94573:intron | 15.0% |
!! | TATATTGTGTTTAATTCATT+CGG | + | chr2.4:15531270-15531289 | MS.gene94573:intron | 15.0% |
!!! | AATTAATTAATTTTGTAGCT+TGG | + | chr2.4:15531614-15531633 | MS.gene94573:intron | 15.0% |
!!! | AATTTATTTGCTTATTTTGT+AGG | + | chr2.4:15530234-15530253 | MS.gene94573:intron | 15.0% |
!!! | ATTTATTTGCTTATTTTGTA+GGG | + | chr2.4:15530235-15530254 | MS.gene94573:intron | 15.0% |
!!! | CGATTTATTTTATTTAATGT+AGG | + | chr2.4:15531131-15531150 | MS.gene94573:intron | 15.0% |
!! | AAATATAAACTATAGTCCTA+TGG | + | chr2.4:15531536-15531555 | MS.gene94573:intron | 20.0% |
!! | AAGAAAAAAGAAGAAAGAAA+TGG | - | chr2.4:15530460-15530479 | None:intergenic | 20.0% |
!! | ACAATATACTAACTAGTTAT+GGG | - | chr2.4:15531258-15531277 | None:intergenic | 20.0% |
!! | ACTTGATACATGAATATAAA+TGG | + | chr2.4:15531205-15531224 | MS.gene94573:intron | 20.0% |
!! | ATAGGACTATAGTTTATATT+TGG | - | chr2.4:15531537-15531556 | None:intergenic | 20.0% |
!! | ATTAAACTATCTACAACATA+AGG | - | chr2.4:15530484-15530503 | None:intergenic | 20.0% |
!! | GATAAAAAATATGTGAGAAA+AGG | - | chr2.4:15530836-15530855 | None:intergenic | 20.0% |
!! | GCTGAAAAATAAAAAATTGT+GGG | + | chr2.4:15530525-15530544 | MS.gene94573:intron | 20.0% |
!! | TGCTGAAAAATAAAAAATTG+TGG | + | chr2.4:15530524-15530543 | MS.gene94573:intron | 20.0% |
!! | TTAAACTATCTACAACATAA+GGG | - | chr2.4:15530483-15530502 | None:intergenic | 20.0% |
!! | TTAATTCATTCGGTTAAAAT+CGG | + | chr2.4:15531280-15531299 | MS.gene94573:intron | 20.0% |
!!! | AAAATATCTATTTTATCTGG+AGG | - | chr2.4:15530892-15530911 | None:intergenic | 20.0% |
!!! | AAATATCTATTTTATCTGGA+GGG | - | chr2.4:15530891-15530910 | None:intergenic | 20.0% |
!!! | AATCAATAACATCTCTAAAA+AGG | - | chr2.4:15530611-15530630 | None:intergenic | 20.0% |
!!! | GTTTCCTATAATTTTGTTTT+TGG | + | chr2.4:15530767-15530786 | MS.gene94573:intron | 20.0% |
!!! | TGCAAAATATCTATTTTATC+TGG | - | chr2.4:15530895-15530914 | None:intergenic | 20.0% |
!!! | TTCTTTATTTCTTTCTTACT+TGG | + | chr2.4:15530675-15530694 | MS.gene94573:intron | 20.0% |
!!! | TTTTCAACATTATCTTAAAG+TGG | - | chr2.4:15530181-15530200 | None:intergenic | 20.0% |
! | CAATATACTAACTAGTTATG+GGG | - | chr2.4:15531257-15531276 | None:intergenic | 25.0% |
! | CACAATATACTAACTAGTTA+TGG | - | chr2.4:15531259-15531278 | None:intergenic | 25.0% |
! | CATGCCAAAAACAAAATTAT+AGG | - | chr2.4:15530774-15530793 | None:intergenic | 25.0% |
! | GCTCAAAAAAAAAAGATGAA+AGG | + | chr2.4:15531085-15531104 | MS.gene94573:intron | 25.0% |
! | TAATTGTTGTCAAAAGTAAC+TGG | - | chr2.4:15531953-15531972 | None:intergenic | 25.0% |
! | TGTATTGAGAAAAAAAAGTC+AGG | - | chr2.4:15531158-15531177 | None:intergenic | 25.0% |
! | TTACATTTACAAAGCAATCA+TGG | - | chr2.4:15530156-15530175 | None:intergenic | 25.0% |
!! | TAATTAATTTTGTAGCTTGG+AGG | + | chr2.4:15531617-15531636 | MS.gene94573:intron | 25.0% |
!!! | AGGACAATTTGATTTTCTTA+AGG | - | chr2.4:15531885-15531904 | None:intergenic | 25.0% |
!!! | CGGTTTTATTATAAGATGAA+AGG | + | chr2.4:15531056-15531075 | MS.gene94573:intron | 25.0% |
!!! | CTATAATTTTGTTTTTGGCA+TGG | + | chr2.4:15530772-15530791 | MS.gene94573:intron | 25.0% |
!!! | GTATTTTGTACTTGCTTTTT+TGG | - | chr2.4:15531509-15531528 | None:intergenic | 25.0% |
!!! | GTCAACTCTTGTTATTTTAT+GGG | + | chr2.4:15530864-15530883 | MS.gene94573:intron | 25.0% |
!!! | TCAACTCTTGTTATTTTATG+GGG | + | chr2.4:15530865-15530884 | MS.gene94573:intron | 25.0% |
!!! | TGTCAACTCTTGTTATTTTA+TGG | + | chr2.4:15530863-15530882 | MS.gene94573:intron | 25.0% |
AAACTAGTATAATGCACCAT+AGG | - | chr2.4:15531555-15531574 | None:intergenic | 30.0% | |
AAATCAAATTGTCCTACTTC+TGG | + | chr2.4:15531890-15531909 | MS.gene94573:CDS | 30.0% | |
AATGACCTTGTTGCTAATAA+AGG | + | chr2.4:15531977-15531996 | MS.gene94573:CDS | 30.0% | |
ACTACCATGTTTAGAAACAA+AGG | + | chr2.4:15531743-15531762 | MS.gene94573:CDS | 30.0% | |
ATCAATAATGAAGCTCGAAT+TGG | + | chr2.4:15530106-15530125 | MS.gene94573:CDS | 30.0% | |
CAGCACTTAATGTGTAAATT+TGG | - | chr2.4:15530509-15530528 | None:intergenic | 30.0% | |
TGATCTTTGATAAAGAGACA+TGG | - | chr2.4:15530995-15531014 | None:intergenic | 30.0% | |
! | AAAAGGTTAAAAGAGAGTGT+GGG | - | chr2.4:15530819-15530838 | None:intergenic | 30.0% |
! | AGCTTCATTATTGATAGCTT+TGG | - | chr2.4:15530101-15530120 | None:intergenic | 30.0% |
!! | AAAATCGGTTTCTAAAACGA+TGG | + | chr2.4:15531295-15531314 | MS.gene94573:intron | 30.0% |
!! | TAGACCTTTGTTTCTAAACA+TGG | - | chr2.4:15531750-15531769 | None:intergenic | 30.0% |
!! | TTGTGATGGATCAATCTTAT+TGG | + | chr2.4:15530258-15530277 | MS.gene94573:CDS | 30.0% |
!!! | AGCTTCAACACTAGTTTTAA+TGG | - | chr2.4:15530362-15530381 | None:intergenic | 30.0% |
!!! | TTGTACTTGCTTTTTTGGAA+TGG | - | chr2.4:15531504-15531523 | None:intergenic | 30.0% |
ACCCAACAAAAATTCAGCTA+GGG | + | chr2.4:15530318-15530337 | MS.gene94573:CDS | 35.0% | |
AGTAGAATTAGTCCTCTAAC+TGG | + | chr2.4:15532121-15532140 | MS.gene94573:CDS | 35.0% | |
GAAAAGGTTAAAAGAGAGTG+TGG | - | chr2.4:15530820-15530839 | None:intergenic | 35.0% | |
GAAGTCCTTTATTAGCAACA+AGG | - | chr2.4:15531985-15532004 | None:intergenic | 35.0% | |
GTAGAATTAGTCCTCTAACT+GGG | + | chr2.4:15532122-15532141 | MS.gene94573:CDS | 35.0% | |
GTTCTCAAGTTTCTTTGGTT+AGG | + | chr2.4:15532038-15532057 | MS.gene94573:CDS | 35.0% | |
TGCAAAGTTTGTGTCAATGT+TGG | - | chr2.4:15531861-15531880 | None:intergenic | 35.0% | |
! | AAAGGTTAAAAGAGAGTGTG+GGG | - | chr2.4:15530818-15530837 | None:intergenic | 35.0% |
! | TCTGATCAAGCTCTTTTCAA+TGG | + | chr2.4:15532010-15532029 | MS.gene94573:CDS | 35.0% |
! | TTCTGGTGGTGACATAAATT+TGG | + | chr2.4:15531907-15531926 | MS.gene94573:CDS | 35.0% |
!! | TGTTGGTTCTCAAGTTTCTT+TGG | + | chr2.4:15532033-15532052 | MS.gene94573:CDS | 35.0% |
!!! | CAAGTCATTTTCAAGTAGCT+AGG | + | chr2.4:15530728-15530747 | MS.gene94573:intron | 35.0% |
!!! | CTTATTTTGTAGGGTTGTGA+TGG | + | chr2.4:15530244-15530263 | MS.gene94573:intron | 35.0% |
AACTAGAGATGGAATTGCTC+TGG | + | chr2.4:15530426-15530445 | MS.gene94573:CDS | 40.0% | |
AATATCAGCACAAGAGACAG+TGG | - | chr2.4:15530395-15530414 | None:intergenic | 40.0% | |
AATGACCTTACTGTCCTTTC+TGG | + | chr2.4:15531776-15531795 | MS.gene94573:CDS | 40.0% | |
AGACATGGCTGACAAAAGAA+TGG | - | chr2.4:15530980-15530999 | None:intergenic | 40.0% | |
CCCAACAAAAATTCAGCTAG+GGG | + | chr2.4:15530319-15530338 | MS.gene94573:CDS | 40.0% | |
GACCCAACAAAAATTCAGCT+AGG | + | chr2.4:15530317-15530336 | MS.gene94573:CDS | 40.0% | |
GGGAGATTAGAAAGAATTGC+AGG | + | chr2.4:15532152-15532171 | MS.gene94573:CDS | 40.0% | |
TCAAATTGTCCTACTTCTGG+TGG | + | chr2.4:15531893-15531912 | MS.gene94573:CDS | 40.0% | |
TGGTAAGTGACACGATTCAT+AGG | + | chr2.4:15531225-15531244 | MS.gene94573:intron | 40.0% | |
TTGACATTCTGCTTGACCTA+TGG | - | chr2.4:15531810-15531829 | None:intergenic | 40.0% | |
TTTACCGGTGAGAAAAATGC+TGG | + | chr2.4:15530295-15530314 | MS.gene94573:CDS | 40.0% | |
TTTATGTCACCACCAGAAGT+AGG | - | chr2.4:15531905-15531924 | None:intergenic | 40.0% | |
! | AAGGTTAAAAGAGAGTGTGG+GGG | - | chr2.4:15530817-15530836 | None:intergenic | 40.0% |
! | ACCCCTAGCTGAATTTTTGT+TGG | - | chr2.4:15530323-15530342 | None:intergenic | 40.0% |
! | AGCATTTTTCTCACCGGTAA+AGG | - | chr2.4:15530296-15530315 | None:intergenic | 40.0% |
! | CAAGCTCTTTTCAATGGTGT+TGG | + | chr2.4:15532016-15532035 | MS.gene94573:CDS | 40.0% |
! | CCCCTAGCTGAATTTTTGTT+GGG | - | chr2.4:15530322-15530341 | None:intergenic | 40.0% |
! | TCTAAACATGGTAGTGAGTG+TGG | - | chr2.4:15531738-15531757 | None:intergenic | 40.0% |
AAGAGACTTTGCAGCTGCTA+TGG | + | chr2.4:15532090-15532109 | MS.gene94573:CDS | 45.0% | |
ACTGGAGAGACAGAATCAAG+AGG | - | chr2.4:15531935-15531954 | None:intergenic | 45.0% | |
AGTCCTCTAACTGGGACTAA+TGG | + | chr2.4:15532130-15532149 | MS.gene94573:CDS | 45.0% | |
AGTGTGGATAGGTCAGAAGA+TGG | - | chr2.4:15531722-15531741 | None:intergenic | 45.0% | |
ATAGGTCAGAAGATGGTCCA+GGG | - | chr2.4:15531715-15531734 | None:intergenic | 45.0% | |
CTAGCACTTGCAACTAGAGA+TGG | + | chr2.4:15530415-15530434 | MS.gene94573:CDS | 45.0% | |
CTTGCATCTCTTCTTCCAAG+TGG | - | chr2.4:15531659-15531678 | None:intergenic | 45.0% | |
GATGACACTGCTACCTTTAC+CGG | + | chr2.4:15530280-15530299 | MS.gene94573:CDS | 45.0% | |
GGGGACATGGTTTGAAAACA+AGG | - | chr2.4:15530798-15530817 | None:intergenic | 45.0% | |
GTCCTCTAACTGGGACTAAT+GGG | + | chr2.4:15532131-15532150 | MS.gene94573:CDS | 45.0% | |
TCCTCTAACTGGGACTAATG+GGG | + | chr2.4:15532132-15532151 | MS.gene94573:CDS | 45.0% | |
! | ACATGGTAGTGAGTGTGGAT+AGG | - | chr2.4:15531733-15531752 | None:intergenic | 45.0% |
!! | TATAAATGAAATTATAAAAA+CGG | + | chr2.4:15531036-15531055 | MS.gene94573:intron | 5.0% |
CAGAAGATGGTCCAGGGATT+TGG | - | chr2.4:15531709-15531728 | None:intergenic | 50.0% | |
CCAACATGGGTAGTACCACT+TGG | + | chr2.4:15531641-15531660 | MS.gene94573:CDS | 50.0% | |
CCAAGTGGTACTACCCATGT+TGG | - | chr2.4:15531644-15531663 | None:intergenic | 50.0% | |
CTATGGTGTGTGCACCAGAA+AGG | - | chr2.4:15531793-15531812 | None:intergenic | 50.0% | |
GATAGGTCAGAAGATGGTCC+AGG | - | chr2.4:15531716-15531735 | None:intergenic | 50.0% | |
GTAGCTTGGAGGACCAACAT+GGG | + | chr2.4:15531628-15531647 | MS.gene94573:intron | 50.0% | |
GTGCACCAGAAAGGACAGTA+AGG | - | chr2.4:15531784-15531803 | None:intergenic | 50.0% | |
TCCCCATTAGTCCCAGTTAG+AGG | - | chr2.4:15532136-15532155 | None:intergenic | 50.0% | |
TGTAGCTTGGAGGACCAACA+TGG | + | chr2.4:15531627-15531646 | MS.gene94573:intron | 50.0% | |
! | AAAAGAGAGTGTGGGGGACA+TGG | - | chr2.4:15530811-15530830 | None:intergenic | 50.0% |
! | CTTTCTGGTGCACACACCAT+AGG | + | chr2.4:15531791-15531810 | MS.gene94573:CDS | 50.0% |
! | GGGTCCAGCATTTTTCTCAC+CGG | - | chr2.4:15530302-15530321 | None:intergenic | 50.0% |
GCAGCAAACAGCCAAATCCC+TGG | + | chr2.4:15531695-15531714 | MS.gene94573:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 15530094 | 15532186 | 15530094 | ID=MS.gene94573 |
chr2.4 | mRNA | 15530094 | 15532186 | 15530094 | ID=MS.gene94573.t1;Parent=MS.gene94573 |
chr2.4 | exon | 15530094 | 15530171 | 15530094 | ID=MS.gene94573.t1.exon1;Parent=MS.gene94573.t1 |
chr2.4 | CDS | 15530094 | 15530171 | 15530094 | ID=cds.MS.gene94573.t1;Parent=MS.gene94573.t1 |
chr2.4 | exon | 15530256 | 15530447 | 15530256 | ID=MS.gene94573.t1.exon2;Parent=MS.gene94573.t1 |
chr2.4 | CDS | 15530256 | 15530447 | 15530256 | ID=cds.MS.gene94573.t1;Parent=MS.gene94573.t1 |
chr2.4 | exon | 15531632 | 15532186 | 15531632 | ID=MS.gene94573.t1.exon3;Parent=MS.gene94573.t1 |
chr2.4 | CDS | 15531632 | 15532186 | 15531632 | ID=cds.MS.gene94573.t1;Parent=MS.gene94573.t1 |
Gene Sequence |
Protein sequence |