Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94802.t1 | KEH42421.1 | 93.4 | 814 | 51 | 1 | 1 | 814 | 8 | 818 | 0.00E+00 | 1533.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94802.t1 | A0A072VLF2 | 93.4 | 814 | 51 | 1 | 1 | 814 | 8 | 818 | 0.0e+00 | 1533.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049821 | MS.gene94802 | 0.810555 | 1.09E-50 | -1.69E-46 |
| MS.gene059018 | MS.gene94802 | 0.819037 | 1.43E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94802.t1 | MTR_1g069195 | 93.366 | 814 | 51 | 1 | 1 | 814 | 8 | 818 | 0.0 | 1553 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 165 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGGGTAGCTGTAAATTTC+TGG | 0.150392 | 1.4:+55626051 | None:intergenic |
| TCGCTGTCATCCAGAGAAAA+TGG | 0.235293 | 1.4:+55625869 | None:intergenic |
| GTCATCAAATTCAGGCTTCT+TGG | 0.244987 | 1.4:+55629368 | None:intergenic |
| TCTGGTTCTTCTTCAAATCT+AGG | 0.251463 | 1.4:+55629681 | None:intergenic |
| ATGTGGTTTGTCAAGTAATA+AGG | 0.251521 | 1.4:+55626408 | None:intergenic |
| CTGATCTCCACCGTTGATCT+TGG | 0.261461 | 1.4:+55625982 | None:intergenic |
| GAACATGGTTTCTCAGTATC+AGG | 0.262797 | 1.4:+55627805 | None:intergenic |
| ACTGAAGCTGAAAGCGAATT+TGG | 0.266535 | 1.4:-55626721 | MS.gene94802:CDS |
| TGAGTGGAACTCAAAGTTTC+AGG | 0.276567 | 1.4:-55626966 | MS.gene94802:CDS |
| TTGAAACAGTCATCAAATTC+AGG | 0.288887 | 1.4:+55629360 | None:intergenic |
| AGTTCAAGAAGTTTCCTCTT+AGG | 0.290857 | 1.4:+55627135 | None:intergenic |
| AGTTCAAGAAGTTTCCTCTT+AGG | 0.290857 | 1.4:+55627453 | None:intergenic |
| GTCTCCTATGTTTCTCGAAT+CGG | 0.297526 | 1.4:-55627397 | MS.gene94802:CDS |
| ACATGACTTCAATTCAGTTT+TGG | 0.308557 | 1.4:-55626389 | MS.gene94802:CDS |
| GATAATGCAGGCGCCATATA+TGG | 0.321690 | 1.4:+55626499 | None:intergenic |
| AGAACCGATTCCTCTTCTTC+TGG | 0.325587 | 1.4:-55626584 | MS.gene94802:CDS |
| AGAGTCGGATGTTCAATTTA+AGG | 0.327795 | 1.4:-55627490 | MS.gene94802:CDS |
| TAATTATGCAAAACCATATA+TGG | 0.329943 | 1.4:-55626512 | MS.gene94802:CDS |
| GAACAGATGAAGCTTCATTC+TGG | 0.331631 | 1.4:+55626227 | None:intergenic |
| AAACTTCTTGAACTTGAATC+TGG | 0.331714 | 1.4:-55627126 | MS.gene94802:CDS |
| GTCTCCTATGTTTCTCGAAT+CGG | 0.334781 | 1.4:-55627079 | MS.gene94802:CDS |
| TTTCTCAGTATCAGGAAATA+AGG | 0.338149 | 1.4:+55627813 | None:intergenic |
| TGTAAAGATGATCTCCAAAC+TGG | 0.340472 | 1.4:+55626338 | None:intergenic |
| GGTGACAGTGACATTACTTC+TGG | 0.342925 | 1.4:-55627249 | MS.gene94802:CDS |
| TTCAGGCTTCTTGGATGATA+AGG | 0.346263 | 1.4:+55629377 | None:intergenic |
| AGAATCAAGCAGACTATATC+TGG | 0.351064 | 1.4:+55627197 | None:intergenic |
| CCTAATGAATCATTTGATAT+CGG | 0.351332 | 1.4:+55626454 | None:intergenic |
| ATGGATCGTTGGGGTTAGTT+CGG | 0.354457 | 1.4:+55629760 | None:intergenic |
| ACCTTCATGTGAAAATCCTT+GGG | 0.360869 | 1.4:+55628174 | None:intergenic |
| ACCTTCCACCATACCATCAT+TGG | 0.362925 | 1.4:-55626192 | MS.gene94802:CDS |
| GAATGAAGCTTCATCTGTTC+AGG | 0.363224 | 1.4:-55626224 | MS.gene94802:CDS |
| ATTTGATCGTGAACTGGTTA+AGG | 0.366460 | 1.4:+55626090 | None:intergenic |
| AGAATCAAGTAAATCGTATC+TGG | 0.371972 | 1.4:+55627515 | None:intergenic |
| CAAGATCAACGGTGGAGATC+AGG | 0.376764 | 1.4:-55625981 | MS.gene94802:CDS |
| AAATATCAAAAGCCCCAGTT+TGG | 0.384262 | 1.4:-55626352 | MS.gene94802:CDS |
| AGATGATGAGATGGATCGTT+GGG | 0.388292 | 1.4:+55629750 | None:intergenic |
| AGATGTTTCCATCTTCATAC+TGG | 0.391341 | 1.4:+55627878 | None:intergenic |
| AACCTTCATGTGAAAATCCT+TGG | 0.397530 | 1.4:+55628173 | None:intergenic |
| TGGATCGTTGGGGTTAGTTC+GGG | 0.403402 | 1.4:+55629761 | None:intergenic |
| CTGGTTCTTCTTCAAATCTA+GGG | 0.407833 | 1.4:+55629682 | None:intergenic |
| TGAAAATCCTTGGGGTTTGA+TGG | 0.412885 | 1.4:+55628183 | None:intergenic |
| CATTAGGCGACTTCCACTTT+AGG | 0.414628 | 1.4:-55626438 | MS.gene94802:CDS |
| TTGAAAGTTCTGAGAATGAT+AGG | 0.414987 | 1.4:+55627023 | None:intergenic |
| TGATCTCCACCGTTGATCTT+GGG | 0.425315 | 1.4:+55625983 | None:intergenic |
| TCTCCTATGTTTCTCGAATC+GGG | 0.425654 | 1.4:-55627396 | MS.gene94802:CDS |
| TCATTCTTGTCAAGGTAACT+TGG | 0.430707 | 1.4:+55626691 | None:intergenic |
| TTACAAGGATGATGAAGAAA+TGG | 0.431696 | 1.4:-55626320 | MS.gene94802:CDS |
| ACTGAGAAACCATGTTCAAA+AGG | 0.432201 | 1.4:-55627799 | MS.gene94802:CDS |
| TCGGTAATTTGATCGTGAAC+TGG | 0.436035 | 1.4:+55626084 | None:intergenic |
| AGTTCCACTCAGTTTGCAGT+TGG | 0.436817 | 1.4:+55626978 | None:intergenic |
| CGAGACATGTGAGGATAGAT+TGG | 0.438266 | 1.4:+55626757 | None:intergenic |
| ACTGGATCATTTCAATGAGC+TGG | 0.438597 | 1.4:-55626620 | MS.gene94802:CDS |
| AGTCAGCGCTCATCGGAAAC+AGG | 0.442148 | 1.4:+55627675 | None:intergenic |
| GTTTCCTCTTAGTTATCTGT+TGG | 0.446193 | 1.4:+55626875 | None:intergenic |
| AGTTCCACTCAGTTTGCACT+TGG | 0.447002 | 1.4:+55627296 | None:intergenic |
| TCTCCTATGTTTCTCGAATC+GGG | 0.452853 | 1.4:-55627078 | MS.gene94802:CDS |
| CGCTGTCATCCAGAGAAAAT+GGG | 0.453700 | 1.4:+55625870 | None:intergenic |
| CATCATTGGGTTAGAAAAGC+AGG | 0.455110 | 1.4:-55626178 | MS.gene94802:CDS |
| ATGAGCTTGGTTCAAGTTCA+AGG | 0.455508 | 1.4:+55626851 | None:intergenic |
| CTAATGAATCATTTGATATC+GGG | 0.456268 | 1.4:+55626455 | None:intergenic |
| TTGACATAGGTGCTAAAACT+TGG | 0.458959 | 1.4:+55627273 | None:intergenic |
| TCATTCCGTTCACCTTCTGT+TGG | 0.460362 | 1.4:-55628656 | MS.gene94802:CDS |
| GTTCCACTCAGTTTGCAGTT+GGG | 0.463122 | 1.4:+55626979 | None:intergenic |
| TTTGCATAATTACAAGTGAC+AGG | 0.468308 | 1.4:+55626523 | None:intergenic |
| TTTCTTTAAGAAATTGAAGA+AGG | 0.469732 | 1.4:-55629448 | MS.gene94802:CDS |
| AGAAGGGCGGCAACTCTTCA+AGG | 0.471423 | 1.4:-55628712 | MS.gene94802:CDS |
| AGAGAGAACTGATGATGTTA+TGG | 0.490339 | 1.4:-55628744 | MS.gene94802:CDS |
| CCGATATCAAATGATTCATT+AGG | 0.494678 | 1.4:-55626454 | MS.gene94802:CDS |
| CCTTCCACCATACCATCATT+GGG | 0.496186 | 1.4:-55626191 | MS.gene94802:CDS |
| AAATACGAGGAACCAAATCC+AGG | 0.496894 | 1.4:-55627555 | MS.gene94802:CDS |
| CTGGATCATTTCAATGAGCT+GGG | 0.498083 | 1.4:-55626619 | MS.gene94802:CDS |
| GCGTCCATTGTCTCTTTGCA+TGG | 0.499717 | 1.4:+55625892 | None:intergenic |
| GTTGGAGCTATGAATAAGTC+AGG | 0.504292 | 1.4:-55628638 | MS.gene94802:intron |
| TCAGGAAACCAGTATGAAGA+TGG | 0.505276 | 1.4:-55627886 | MS.gene94802:intron |
| CTTCCGTATCACGACGATGA+TGG | 0.505616 | 1.4:+55626143 | None:intergenic |
| ATTCGCTTTCAGCTTCAGTT+CGG | 0.510295 | 1.4:+55626725 | None:intergenic |
| AACTCCAACAGATAACTAAG+AGG | 0.512841 | 1.4:-55626879 | MS.gene94802:CDS |
| GTTTCCTCTTAGGTATCTGA+TGG | 0.514870 | 1.4:+55627145 | None:intergenic |
| CTACCATCATCGTCGTGATA+CGG | 0.517064 | 1.4:-55626146 | MS.gene94802:CDS |
| AAGATGATGAGATGGATCGT+TGG | 0.518751 | 1.4:+55629749 | None:intergenic |
| TTCTGACGAAGATGATGAGA+TGG | 0.523413 | 1.4:+55629741 | None:intergenic |
| AAGATCAACGGTGGAGATCA+GGG | 0.525662 | 1.4:-55625980 | MS.gene94802:CDS |
| GTTTGGAGATCATCTTTACA+AGG | 0.526410 | 1.4:-55626335 | MS.gene94802:CDS |
| TGTGGTTTGTCAAGTAATAA+GGG | 0.526462 | 1.4:+55626409 | None:intergenic |
| AACTCCATCAGATACCTAAG+AGG | 0.528516 | 1.4:-55627149 | MS.gene94802:CDS |
| CTCATACTTCAATGATCAGA+TGG | 0.533540 | 1.4:-55627103 | MS.gene94802:CDS |
| GAATTTGATGACTGTTTCAA+AGG | 0.534220 | 1.4:-55629357 | MS.gene94802:intron |
| CTGAGAAACCATGTTCAAAA+GGG | 0.535441 | 1.4:-55627798 | MS.gene94802:intron |
| CCTAGGTGAAGATGAAAGCC+AGG | 0.540912 | 1.4:+55626120 | None:intergenic |
| GTTCCACTCAGTTTGCACTT+GGG | 0.542296 | 1.4:+55627297 | None:intergenic |
| AAGTTTCAGGACCTCTGTCA+AGG | 0.544737 | 1.4:-55626953 | MS.gene94802:CDS |
| TGTTATGGTTGGGACTAAGA+AGG | 0.545123 | 1.4:-55628729 | MS.gene94802:CDS |
| TCACCCGATTCGAGAAACAT+AGG | 0.545217 | 1.4:+55627393 | None:intergenic |
| TTTCTAACCCAATGATGGTA+TGG | 0.546372 | 1.4:+55626184 | None:intergenic |
| TCAACTGATCGGAGGAACAT+AGG | 0.547048 | 1.4:+55626805 | None:intergenic |
| ATCGTCGTGATACGGAAGCC+TGG | 0.549204 | 1.4:-55626138 | MS.gene94802:CDS |
| AAGTTCTGAGAATGATAGGC+TGG | 0.557476 | 1.4:+55627027 | None:intergenic |
| TTTACTTGATTCTCGAGAGT+CGG | 0.559060 | 1.4:-55627505 | MS.gene94802:CDS |
| TGATCATTGAAGTATGAGCT+TGG | 0.559791 | 1.4:+55627426 | None:intergenic |
| GTAGTGTTTATTGTGTGAGA+AGG | 0.560569 | 1.4:+55626270 | None:intergenic |
| GGAGTTATATATTTGAACAA+AGG | 0.565537 | 1.4:+55625931 | None:intergenic |
| TCAGTGCAGTCAGCGCTCAT+CGG | 0.565548 | 1.4:+55627668 | None:intergenic |
| CCTGGCTTTCATCTTCACCT+AGG | 0.570059 | 1.4:-55626120 | MS.gene94802:CDS |
| AAAACTGAATTGAAGTCATG+TGG | 0.571542 | 1.4:+55626391 | None:intergenic |
| GGTTTGATGGTGTCACCACA+AGG | 0.572380 | 1.4:+55628196 | None:intergenic |
| GTAAAGATGATCTCCAAACT+GGG | 0.572413 | 1.4:+55626339 | None:intergenic |
| GTGAGGATAGATTGGAAAGT+CGG | 0.572970 | 1.4:+55626765 | None:intergenic |
| AGAACTGATGATGTTATGGT+TGG | 0.572989 | 1.4:-55628740 | MS.gene94802:CDS |
| GTGAGAAGGACAATGCTGTC+TGG | 0.573265 | 1.4:+55626284 | None:intergenic |
| CCCAATGATGGTATGGTGGA+AGG | 0.573459 | 1.4:+55626191 | None:intergenic |
| TCAGCTTCAGTTCGGAACAC+AGG | 0.573751 | 1.4:+55626733 | None:intergenic |
| GGGTGAGAAAATTACTCCAC+AGG | 0.579260 | 1.4:-55627376 | MS.gene94802:CDS |
| GCATTATCAATCTTAGACCA+TGG | 0.580035 | 1.4:-55626484 | MS.gene94802:CDS |
| TAGATTGGAAAGTCGGTGTG+AGG | 0.580475 | 1.4:+55626772 | None:intergenic |
| TGATCACTGAAGGATGAGCT+TGG | 0.580581 | 1.4:+55626838 | None:intergenic |
| AGCACTGTCTGATACCTAAG+AGG | 0.580939 | 1.4:-55627467 | MS.gene94802:CDS |
| TCTCCCGATTCGAGAAACAT+AGG | 0.582033 | 1.4:+55627075 | None:intergenic |
| TTTGTCAAGTAATAAGGGTG+AGG | 0.582048 | 1.4:+55626414 | None:intergenic |
| AAGTTCTGAGAATGATATGT+TGG | 0.582909 | 1.4:+55627345 | None:intergenic |
| ATAAGGGTGAGGGCCTAAAG+TGG | 0.584494 | 1.4:+55626425 | None:intergenic |
| CCTTCATGTGAAAATCCTTG+GGG | 0.584652 | 1.4:+55628175 | None:intergenic |
| AGTATCAGGAAATAAGGTAT+CGG | 0.584922 | 1.4:+55627819 | None:intergenic |
| GTCAAGGGTGACATAACTCA+TGG | 0.593911 | 1.4:-55626937 | MS.gene94802:CDS |
| TTGATATCGGGTCTTCACCA+TGG | 0.594260 | 1.4:+55626467 | None:intergenic |
| TGGTCTAAGATTGATAATGC+AGG | 0.596597 | 1.4:+55626487 | None:intergenic |
| GAGTTACATCATTCTTGTCA+AGG | 0.598010 | 1.4:+55626683 | None:intergenic |
| GGAATGCGAGAAGAATGATC+TGG | 0.599342 | 1.4:+55629663 | None:intergenic |
| GAACTGATGATGTTATGGTT+GGG | 0.602008 | 1.4:-55628739 | MS.gene94802:CDS |
| AGTTTCAGGACCTCTGTCAA+GGG | 0.602362 | 1.4:-55626952 | MS.gene94802:CDS |
| ATGTCCATGCAAAGAGACAA+TGG | 0.602706 | 1.4:-55625896 | MS.gene94802:CDS |
| AGAATGATAGGCTGGAAACT+CGG | 0.603792 | 1.4:+55627035 | None:intergenic |
| TTGTCAAGTAATAAGGGTGA+GGG | 0.604929 | 1.4:+55626415 | None:intergenic |
| GTTATGGTTGGGACTAAGAA+GGG | 0.609027 | 1.4:-55628728 | MS.gene94802:CDS |
| GTCACTGTCACCCTTGACAT+AGG | 0.610991 | 1.4:+55627260 | None:intergenic |
| CATTATGAGCCCAAGATCAA+CGG | 0.614329 | 1.4:-55625992 | MS.gene94802:CDS |
| AGGCAACAAATGATCACTGA+AGG | 0.615694 | 1.4:+55626828 | None:intergenic |
| CTAACCCAATGATGGTATGG+TGG | 0.617687 | 1.4:+55626187 | None:intergenic |
| AATTTCTGGAAATCGAACTT+CGG | 0.621260 | 1.4:+55626065 | None:intergenic |
| GACAAGAATGATGTAACTCG+TGG | 0.621475 | 1.4:-55626679 | MS.gene94802:CDS |
| TCTCAAGGTTGTGGACCTTG+TGG | 0.621786 | 1.4:-55628211 | MS.gene94802:CDS |
| AAACAGGCGACTAAGAAGCA+TGG | 0.626587 | 1.4:+55627691 | None:intergenic |
| TTATTCATAGCTCCAACAGA+AGG | 0.626831 | 1.4:+55628644 | None:intergenic |
| TAGCTCCAACAGAAGGTGAA+CGG | 0.632814 | 1.4:+55628651 | None:intergenic |
| ACGACGATGATGGTAGTCAC+AGG | 0.633957 | 1.4:+55626153 | None:intergenic |
| TAGGCTGGAAACTCGGCATG+TGG | 0.634219 | 1.4:+55627042 | None:intergenic |
| AGATCAACGGTGGAGATCAG+GGG | 0.636017 | 1.4:-55625979 | MS.gene94802:CDS |
| CATGGACATATGAAGACATG+AGG | 0.646261 | 1.4:+55625910 | None:intergenic |
| GAGTAATTAAGTCAACTGAT+CGG | 0.652391 | 1.4:+55626794 | None:intergenic |
| GATCAACGGTGGAGATCAGG+GGG | 0.659322 | 1.4:-55625978 | MS.gene94802:CDS |
| CTGGTTAAGGATAAGCACCT+AGG | 0.662007 | 1.4:+55626103 | None:intergenic |
| GCACCCAACTGCAAACTGAG+TGG | 0.662121 | 1.4:-55626982 | MS.gene94802:CDS |
| GCACCCAAGTGCAAACTGAG+TGG | 0.664604 | 1.4:-55627300 | MS.gene94802:CDS |
| GGTGCTGTTATACTGTACTG+AGG | 0.674111 | 1.4:+55627000 | None:intergenic |
| TATGAGCCCAAGATCAACGG+TGG | 0.678212 | 1.4:-55625989 | MS.gene94802:CDS |
| TGGATCATTTCAATGAGCTG+GGG | 0.679444 | 1.4:-55626618 | MS.gene94802:CDS |
| AGTTATGTCACCCTTGACAG+AGG | 0.687435 | 1.4:+55626942 | None:intergenic |
| ACTGATCGGAGGAACATAGG+AGG | 0.692990 | 1.4:+55626808 | None:intergenic |
| TAATTAAGTCAACTGATCGG+AGG | 0.694905 | 1.4:+55626797 | None:intergenic |
| TAAAGATGATCTCCAAACTG+GGG | 0.703480 | 1.4:+55626340 | None:intergenic |
| TATGTTGGAAACTCAGCCTG+TGG | 0.704608 | 1.4:+55627360 | None:intergenic |
| GGTGACACCATCAAACCCCA+AGG | 0.709681 | 1.4:-55628190 | MS.gene94802:CDS |
| ATGGTTGGGACTAAGAAGGG+CGG | 0.710065 | 1.4:-55628725 | MS.gene94802:CDS |
| AACACAGGTCGAGACATGTG+AGG | 0.715176 | 1.4:+55626748 | None:intergenic |
| GATGATGAGATGGATCGTTG+GGG | 0.720684 | 1.4:+55629751 | None:intergenic |
| ATCTTCTGCTCAGAAATACG+AGG | 0.721655 | 1.4:-55627568 | MS.gene94802:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTAAATTCATAATTTTA+AGG | - | chr1.4:55627601-55627620 | MS.gene94802:intron | 10.0% |
| !! | ATTACCATTTGAATAAAATA+GGG | - | chr1.4:55627869-55627888 | MS.gene94802:CDS | 15.0% |
| !!! | AAAATATATCTTTTAAGTGA+TGG | + | chr1.4:55626833-55626852 | None:intergenic | 15.0% |
| !!! | GTATCATATTTTCTATTTAT+TGG | + | chr1.4:55627055-55627074 | None:intergenic | 15.0% |
| !! | AAGATTAATTAACAAATGAG+TGG | + | chr1.4:55627578-55627597 | None:intergenic | 20.0% |
| !! | ACATAATGATCATAAGTATT+AGG | + | chr1.4:55627016-55627035 | None:intergenic | 20.0% |
| !! | ACTTGAATTATGTATTTGTT+TGG | - | chr1.4:55626280-55626299 | MS.gene94802:CDS | 20.0% |
| !! | CATAATGATCATAAGTATTA+GGG | + | chr1.4:55627015-55627034 | None:intergenic | 20.0% |
| !! | CATTACCATTTGAATAAAAT+AGG | - | chr1.4:55627868-55627887 | MS.gene94802:CDS | 20.0% |
| !! | CTCAAATATAATCAGTAAAT+GGG | + | chr1.4:55627655-55627674 | None:intergenic | 20.0% |
| !! | GAAACTGAAAATTGAAATTA+TGG | + | chr1.4:55627290-55627309 | None:intergenic | 20.0% |
| !! | TAATTATGCAAAACCATATA+TGG | - | chr1.4:55629094-55629113 | MS.gene94802:intron | 20.0% |
| !! | TCTCAAATATAATCAGTAAA+TGG | + | chr1.4:55627656-55627675 | None:intergenic | 20.0% |
| !!! | AAATAAGGTTTGTTTCAATT+GGG | - | chr1.4:55626489-55626508 | MS.gene94802:CDS | 20.0% |
| !!! | AAATCCCTATTTTATTCAAA+TGG | + | chr1.4:55627876-55627895 | None:intergenic | 20.0% |
| !!! | AACAAATATTTTGTATTGTG+TGG | - | chr1.4:55627161-55627180 | MS.gene94802:CDS | 20.0% |
| !!! | AATTGAAACAAACCTTATTT+GGG | + | chr1.4:55626489-55626508 | None:intergenic | 20.0% |
| !!! | TTTCTTTAAGAAATTGAAGA+AGG | - | chr1.4:55626158-55626177 | MS.gene94802:CDS | 20.0% |
| ! | AAAATTGAAATTATGGAGGT+GGG | + | chr1.4:55627283-55627302 | None:intergenic | 25.0% |
| ! | ACTGAAAATTGAAATTATGG+AGG | + | chr1.4:55627287-55627306 | None:intergenic | 25.0% |
| ! | CAATTGAAACAAACCTTATT+TGG | + | chr1.4:55626490-55626509 | None:intergenic | 25.0% |
| ! | CCTAATGAATCATTTGATAT+CGG | + | chr1.4:55629155-55629174 | None:intergenic | 25.0% |
| ! | CTAATGAATCATTTGATATC+GGG | + | chr1.4:55629154-55629173 | None:intergenic | 25.0% |
| ! | GGAGTTATATATTTGAACAA+AGG | + | chr1.4:55629678-55629697 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATCCAAAT+TGG | - | chr1.4:55626715-55626734 | MS.gene94802:CDS | 25.0% |
| ! | TTATTTATGCTGAGAATTTG+AGG | - | chr1.4:55626090-55626109 | MS.gene94802:CDS | 25.0% |
| ! | TTTCAGTACATCTACAATTA+GGG | + | chr1.4:55626810-55626829 | None:intergenic | 25.0% |
| !! | CAAATAAGGTTTGTTTCAAT+TGG | - | chr1.4:55626488-55626507 | MS.gene94802:CDS | 25.0% |
| !! | GAATAAAATAGGGATTTTTC+AGG | - | chr1.4:55627879-55627898 | MS.gene94802:CDS | 25.0% |
| !! | TGTTTTCATATAAGCTATTC+TGG | - | chr1.4:55626399-55626418 | MS.gene94802:CDS | 25.0% |
| !! | TTTTTGAATAACTAGCAAGT+AGG | + | chr1.4:55627135-55627154 | None:intergenic | 25.0% |
| AAAACTGAATTGAAGTCATG+TGG | + | chr1.4:55629218-55629237 | None:intergenic | 30.0% | |
| AAACTTCTTGAACTTGAATC+TGG | - | chr1.4:55628480-55628499 | MS.gene94802:intron | 30.0% | |
| AAGGAAGGAAAATCATTTGA+AGG | + | chr1.4:55628008-55628027 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAACTTG+TGG | - | chr1.4:55626434-55626453 | MS.gene94802:CDS | 30.0% | |
| AATTTACTTCATGGTACTTC+AGG | - | chr1.4:55627702-55627721 | MS.gene94802:CDS | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | + | chr1.4:55626705-55626724 | None:intergenic | 30.0% | |
| AGAATCAAGTAAATCGTATC+TGG | + | chr1.4:55628094-55628113 | None:intergenic | 30.0% | |
| AGTATCAGGAAATAAGGTAT+CGG | + | chr1.4:55627790-55627809 | None:intergenic | 30.0% | |
| ATCAGCATAAATCCTTTAAG+GGG | + | chr1.4:55626778-55626797 | None:intergenic | 30.0% | |
| ATTGTTAGACCAAAAGTTTC+AGG | + | chr1.4:55626742-55626761 | None:intergenic | 30.0% | |
| CATCAGCATAAATCCTTTAA+GGG | + | chr1.4:55626779-55626798 | None:intergenic | 30.0% | |
| CCGATATCAAATGATTCATT+AGG | - | chr1.4:55629152-55629171 | MS.gene94802:intron | 30.0% | |
| GAAAATTGAAATTATGGAGG+TGG | + | chr1.4:55627284-55627303 | None:intergenic | 30.0% | |
| GAGTAATTAAGTCAACTGAT+CGG | + | chr1.4:55628815-55628834 | None:intergenic | 30.0% | |
| GTTTCAGTACATCTACAATT+AGG | + | chr1.4:55626811-55626830 | None:intergenic | 30.0% | |
| TTACAAGGATGATGAAGAAA+TGG | - | chr1.4:55629286-55629305 | MS.gene94802:intron | 30.0% | |
| TTGAAACAGTCATCAAATTC+AGG | + | chr1.4:55626249-55626268 | None:intergenic | 30.0% | |
| TTGTTAGACCAAAAGTTTCA+GGG | + | chr1.4:55626741-55626760 | None:intergenic | 30.0% | |
| TTTCTCAGTATCAGGAAATA+AGG | + | chr1.4:55627796-55627815 | None:intergenic | 30.0% | |
| TTTGCATAATTACAAGTGAC+AGG | + | chr1.4:55629086-55629105 | None:intergenic | 30.0% | |
| ! | AAAGCATACTCAGAAGTTTT+CGG | + | chr1.4:55626141-55626160 | None:intergenic | 30.0% |
| ! | AAAGCATGAAACTTTTACAC+TGG | - | chr1.4:55628968-55628987 | MS.gene94802:intron | 30.0% |
| ! | AAGGATTTATAGCTTTACGA+AGG | + | chr1.4:55627989-55628008 | None:intergenic | 30.0% |
| ! | AATTTCTGGAAATCGAACTT+CGG | + | chr1.4:55629544-55629563 | None:intergenic | 30.0% |
| ! | ACATGACTTCAATTCAGTTT+TGG | - | chr1.4:55629217-55629236 | MS.gene94802:intron | 30.0% |
| ! | ACCATAAGTTTTCCCAAATA+AGG | - | chr1.4:55626474-55626493 | MS.gene94802:CDS | 30.0% |
| ! | ACCTTATTTGGGAAAACTTA+TGG | + | chr1.4:55626478-55626497 | None:intergenic | 30.0% |
| ! | ATGTGGTTTGTCAAGTAATA+AGG | + | chr1.4:55629201-55629220 | None:intergenic | 30.0% |
| ! | GAATTTGATGACTGTTTCAA+AGG | - | chr1.4:55626249-55626268 | MS.gene94802:CDS | 30.0% |
| ! | GGTGTGATTTTGAATTATTC+AGG | - | chr1.4:55626111-55626130 | MS.gene94802:CDS | 30.0% |
| ! | GGTTATTTGAGTTTATCTAC+TGG | - | chr1.4:55626510-55626529 | MS.gene94802:CDS | 30.0% |
| ! | TCAAAAGATCTTTTTCCTCT+TGG | - | chr1.4:55627331-55627350 | MS.gene94802:CDS | 30.0% |
| ! | TGTGGTTTGTCAAGTAATAA+GGG | + | chr1.4:55629200-55629219 | None:intergenic | 30.0% |
| ! | TTAAGTTGTTCATCCAAACA+AGG | - | chr1.4:55626656-55626675 | MS.gene94802:CDS | 30.0% |
| ! | TTTCTTCTTATTGACTGCTA+CGG | - | chr1.4:55627460-55627479 | MS.gene94802:CDS | 30.0% |
| !! | AAATGCTTTTGATTGCACAA+AGG | - | chr1.4:55629046-55629065 | MS.gene94802:intron | 30.0% |
| !! | AAGTTCTGAGAATGATATGT+TGG | + | chr1.4:55628264-55628283 | None:intergenic | 30.0% |
| !! | AGACGTATCAACTTTTAAGA+TGG | - | chr1.4:55626925-55626944 | MS.gene94802:CDS | 30.0% |
| !! | TTGAAAGTTCTGAGAATGAT+AGG | + | chr1.4:55628268-55628287 | None:intergenic | 30.0% |
| !!! | TTCAATTCAGTTTTGGATTC+TGG | - | chr1.4:55629224-55629243 | MS.gene94802:intron | 30.0% |
| AAATATCAAAAGCCCCAGTT+TGG | - | chr1.4:55629254-55629273 | MS.gene94802:intron | 35.0% | |
| AACCTTCATGTGAAAATCCT+TGG | + | chr1.4:55627436-55627455 | None:intergenic | 35.0% | |
| AACTCCAACAGATAACTAAG+AGG | - | chr1.4:55628727-55628746 | MS.gene94802:CDS | 35.0% | |
| ACATGCTTGTGTCATGTATT+AGG | - | chr1.4:55627208-55627227 | MS.gene94802:CDS | 35.0% | |
| ACCTTCATGTGAAAATCCTT+GGG | + | chr1.4:55627435-55627454 | None:intergenic | 35.0% | |
| ACTAGAAGGTGGTGAAATAT+TGG | - | chr1.4:55627249-55627268 | MS.gene94802:CDS | 35.0% | |
| ACTGAGAAACCATGTTCAAA+AGG | - | chr1.4:55627807-55627826 | MS.gene94802:CDS | 35.0% | |
| AGAATCAAGCAGACTATATC+TGG | + | chr1.4:55628412-55628431 | None:intergenic | 35.0% | |
| AGAGTCGGATGTTCAATTTA+AGG | - | chr1.4:55628116-55628135 | MS.gene94802:intron | 35.0% | |
| AGATGTTTCCATCTTCATAC+TGG | + | chr1.4:55627731-55627750 | None:intergenic | 35.0% | |
| AGTTCAAGAAGTTTCCTCTT+AGG | + | chr1.4:55628156-55628175 | None:intergenic | 35.0% | |
| ATTTGATCGTGAACTGGTTA+AGG | + | chr1.4:55629519-55629538 | None:intergenic | 35.0% | |
| CCATCAGCATAAATCCTTTA+AGG | + | chr1.4:55626780-55626799 | None:intergenic | 35.0% | |
| CCTTAAAGGATTTATGCTGA+TGG | - | chr1.4:55626777-55626796 | MS.gene94802:CDS | 35.0% | |
| CTCATACTTCAATGATCAGA+TGG | - | chr1.4:55628503-55628522 | MS.gene94802:intron | 35.0% | |
| CTGAGAAACCATGTTCAAAA+GGG | - | chr1.4:55627808-55627827 | MS.gene94802:CDS | 35.0% | |
| GAGTTACATCATTCTTGTCA+AGG | + | chr1.4:55628926-55628945 | None:intergenic | 35.0% | |
| GCATTATCAATCTTAGACCA+TGG | - | chr1.4:55629122-55629141 | MS.gene94802:intron | 35.0% | |
| GTAAAGATGATCTCCAAACT+GGG | + | chr1.4:55629270-55629289 | None:intergenic | 35.0% | |
| GTAGTGTTTATTGTGTGAGA+AGG | + | chr1.4:55629339-55629358 | None:intergenic | 35.0% | |
| GTGTGAGACAATTTACTTCA+TGG | - | chr1.4:55627693-55627712 | MS.gene94802:CDS | 35.0% | |
| GTTTCCTCTTAGTTATCTGT+TGG | + | chr1.4:55628734-55628753 | None:intergenic | 35.0% | |
| GTTTGGAGATCATCTTTACA+AGG | - | chr1.4:55629271-55629290 | MS.gene94802:intron | 35.0% | |
| TAAAGATGATCTCCAAACTG+GGG | + | chr1.4:55629269-55629288 | None:intergenic | 35.0% | |
| TAATTAAGTCAACTGATCGG+AGG | + | chr1.4:55628812-55628831 | None:intergenic | 35.0% | |
| TCATTCTTGTCAAGGTAACT+TGG | + | chr1.4:55628918-55628937 | None:intergenic | 35.0% | |
| TGATCATTGAAGTATGAGCT+TGG | + | chr1.4:55628183-55628202 | None:intergenic | 35.0% | |
| TGTAAAGATGATCTCCAAAC+TGG | + | chr1.4:55629271-55629290 | None:intergenic | 35.0% | |
| TTATTCATAGCTCCAACAGA+AGG | + | chr1.4:55626965-55626984 | None:intergenic | 35.0% | |
| TTGACATAGGTGCTAAAACT+TGG | + | chr1.4:55628336-55628355 | None:intergenic | 35.0% | |
| TTGTCAAGTAATAAGGGTGA+GGG | + | chr1.4:55629194-55629213 | None:intergenic | 35.0% | |
| TTTACTTGATTCTCGAGAGT+CGG | - | chr1.4:55628101-55628120 | MS.gene94802:intron | 35.0% | |
| TTTCTAACCCAATGATGGTA+TGG | + | chr1.4:55629425-55629444 | None:intergenic | 35.0% | |
| TTTGTCAAGTAATAAGGGTG+AGG | + | chr1.4:55629195-55629214 | None:intergenic | 35.0% | |
| ! | AAGCTATTCTGGAAAGCTTA+TGG | - | chr1.4:55626410-55626429 | MS.gene94802:CDS | 35.0% |
| ! | AGAACTGATGATGTTATGGT+TGG | - | chr1.4:55626866-55626885 | MS.gene94802:CDS | 35.0% |
| ! | AGAGAGAACTGATGATGTTA+TGG | - | chr1.4:55626862-55626881 | MS.gene94802:CDS | 35.0% |
| ! | CGAAGACATATTTTCGCTTT+CGG | + | chr1.4:55629576-55629595 | None:intergenic | 35.0% |
| ! | CTGGTTCTTCTTCAAATCTA+GGG | + | chr1.4:55625927-55625946 | None:intergenic | 35.0% |
| ! | GAACTGATGATGTTATGGTT+GGG | - | chr1.4:55626867-55626886 | MS.gene94802:CDS | 35.0% |
| ! | GAAGACATATTTTCGCTTTC+GGG | + | chr1.4:55629575-55629594 | None:intergenic | 35.0% |
| ! | GCAACATTTTCTCTCTGTAA+TGG | + | chr1.4:55625967-55625986 | None:intergenic | 35.0% |
| ! | GGAAAAAGATCTTTTGACAC+AGG | + | chr1.4:55627328-55627347 | None:intergenic | 35.0% |
| ! | TCAGCATAAATCCTTTAAGG+GGG | + | chr1.4:55626777-55626796 | None:intergenic | 35.0% |
| ! | TTGATGACTGTTTCAAAGGT+TGG | - | chr1.4:55626253-55626272 | MS.gene94802:CDS | 35.0% |
| ! | TTGTCTAACCCTTTTGAACA+TGG | + | chr1.4:55627819-55627838 | None:intergenic | 35.0% |
| ! | TTTTCCAGAAGAAGAGGAAT+CGG | + | chr1.4:55629029-55629048 | None:intergenic | 35.0% |
| !! | AAAGCATTTTCCAGAAGAAG+AGG | + | chr1.4:55629035-55629054 | None:intergenic | 35.0% |
| !! | AAGTTTTAGCACCTATGTCA+AGG | - | chr1.4:55628335-55628354 | MS.gene94802:intron | 35.0% |
| !! | AGTTTTAGCACCTATGTCAA+GGG | - | chr1.4:55628336-55628355 | MS.gene94802:intron | 35.0% |
| !! | CTCTCTATTTTTCCTGGATT+TGG | + | chr1.4:55628066-55628085 | None:intergenic | 35.0% |
| !! | TCTGGTTCTTCTTCAAATCT+AGG | + | chr1.4:55625928-55625947 | None:intergenic | 35.0% |
| !! | TGGTCTAAGATTGATAATGC+AGG | + | chr1.4:55629122-55629141 | None:intergenic | 35.0% |
| !!! | CTAGGGTTTTGTTTTTCATG+AGG | + | chr1.4:55625910-55625929 | None:intergenic | 35.0% |
| !!! | GAATCATCATCCTTTTTTCC+TGG | + | chr1.4:55626210-55626229 | None:intergenic | 35.0% |
| AAATACGAGGAACCAAATCC+AGG | - | chr1.4:55628051-55628070 | MS.gene94802:intron | 40.0% | |
| AACTCCATCAGATACCTAAG+AGG | - | chr1.4:55628457-55628476 | MS.gene94802:intron | 40.0% | |
| AAGATGATGAGATGGATCGT+TGG | + | chr1.4:55625860-55625879 | None:intergenic | 40.0% | |
| AAGGATTTATGCTGATGGCA+AGG | - | chr1.4:55626782-55626801 | MS.gene94802:CDS | 40.0% | |
| ACTGAAGCTGAAAGCGAATT+TGG | - | chr1.4:55628885-55628904 | MS.gene94802:intron | 40.0% | |
| ACTGGATCATTTCAATGAGC+TGG | - | chr1.4:55628986-55629005 | MS.gene94802:intron | 40.0% | |
| AGAATGATAGGCTGGAAACT+CGG | + | chr1.4:55628574-55628593 | None:intergenic | 40.0% | |
| AGATGATGAGATGGATCGTT+GGG | + | chr1.4:55625859-55625878 | None:intergenic | 40.0% | |
| AGCATGCTGAAAAACTCTCA+AGG | - | chr1.4:55627380-55627399 | MS.gene94802:CDS | 40.0% | |
| AGGCAACAAATGATCACTGA+AGG | + | chr1.4:55628781-55628800 | None:intergenic | 40.0% | |
| AGTGGTATCCAGTCAAAGAT+TGG | + | chr1.4:55627560-55627579 | None:intergenic | 40.0% | |
| ATCTTCTGCTCAGAAATACG+AGG | - | chr1.4:55628038-55628057 | MS.gene94802:intron | 40.0% | |
| ATGTCCATGCAAAGAGACAA+TGG | - | chr1.4:55629710-55629729 | MS.gene94802:CDS | 40.0% | |
| ATTCGCTTTCAGCTTCAGTT+CGG | + | chr1.4:55628884-55628903 | None:intergenic | 40.0% | |
| CAAAAGTTTCAGGGCCAATT+TGG | + | chr1.4:55626732-55626751 | None:intergenic | 40.0% | |
| CATGGACATATGAAGACATG+AGG | + | chr1.4:55629699-55629718 | None:intergenic | 40.0% | |
| CATTATGAGCCCAAGATCAA+CGG | - | chr1.4:55629614-55629633 | MS.gene94802:intron | 40.0% | |
| CCTTCATGTGAAAATCCTTG+GGG | + | chr1.4:55627434-55627453 | None:intergenic | 40.0% | |
| CTGAAAAACTCTCAAGGTTG+TGG | - | chr1.4:55627386-55627405 | MS.gene94802:CDS | 40.0% | |
| CTGGATCATTTCAATGAGCT+GGG | - | chr1.4:55628987-55629006 | MS.gene94802:intron | 40.0% | |
| CTTCAGTTGTGTGAACTAGA+AGG | - | chr1.4:55627235-55627254 | MS.gene94802:CDS | 40.0% | |
| GAACAGATGAAGCTTCATTC+TGG | + | chr1.4:55629382-55629401 | None:intergenic | 40.0% | |
| GAACATGGTTTCTCAGTATC+AGG | + | chr1.4:55627804-55627823 | None:intergenic | 40.0% | |
| GAATGAAGCTTCATCTGTTC+AGG | - | chr1.4:55629382-55629401 | MS.gene94802:CDS | 40.0% | |
| GACAAGAATGATGTAACTCG+TGG | - | chr1.4:55628927-55628946 | MS.gene94802:intron | 40.0% | |
| GATACTCATGAATCGTTCCT+TGG | - | chr1.4:55627070-55627089 | MS.gene94802:CDS | 40.0% | |
| GGAAAAATGTGTGCAACAGT+TGG | - | chr1.4:55627500-55627519 | MS.gene94802:CDS | 40.0% | |
| GTCATCAAATTCAGGCTTCT+TGG | + | chr1.4:55626241-55626260 | None:intergenic | 40.0% | |
| GTCTCCTATGTTTCTCGAAT+CGG | - | chr1.4:55628209-55628228 | MS.gene94802:CDS | 40.0% | |
| GTGAGGATAGATTGGAAAGT+CGG | + | chr1.4:55628844-55628863 | None:intergenic | 40.0% | |
| GTTATGGTTGGGACTAAGAA+GGG | - | chr1.4:55626878-55626897 | MS.gene94802:CDS | 40.0% | |
| GTTGGAGCTATGAATAAGTC+AGG | - | chr1.4:55626968-55626987 | MS.gene94802:CDS | 40.0% | |
| GTTTCCTCTTAGGTATCTGA+TGG | + | chr1.4:55628464-55628483 | None:intergenic | 40.0% | |
| TAACCTAATGCATGCGTTCA+TGG | - | chr1.4:55626007-55626026 | MS.gene94802:CDS | 40.0% | |
| TCAGGAAACCAGTATGAAGA+TGG | - | chr1.4:55627720-55627739 | MS.gene94802:intron | 40.0% | |
| TCGGTAATTTGATCGTGAAC+TGG | + | chr1.4:55629525-55629544 | None:intergenic | 40.0% | |
| TCTCCTATGTTTCTCGAATC+GGG | - | chr1.4:55628210-55628229 | MS.gene94802:CDS | 40.0% | |
| TGAAAATCCTTGGGGTTTGA+TGG | + | chr1.4:55627426-55627445 | None:intergenic | 40.0% | |
| TGAGTGGAACTCAAAGTTTC+AGG | - | chr1.4:55628640-55628659 | MS.gene94802:CDS | 40.0% | |
| TGGATCATTTCAATGAGCTG+GGG | - | chr1.4:55628988-55629007 | MS.gene94802:intron | 40.0% | |
| TGTTATGGTTGGGACTAAGA+AGG | - | chr1.4:55626877-55626896 | MS.gene94802:CDS | 40.0% | |
| TTCAGGCTTCTTGGATGATA+AGG | + | chr1.4:55626232-55626251 | None:intergenic | 40.0% | |
| TTCGGGTAGCTGTAAATTTC+TGG | + | chr1.4:55629558-55629577 | None:intergenic | 40.0% | |
| TTCTGACGAAGATGATGAGA+TGG | + | chr1.4:55625868-55625887 | None:intergenic | 40.0% | |
| TTCTTCTGCTCCAGGAAAAA+AGG | - | chr1.4:55626197-55626216 | MS.gene94802:CDS | 40.0% | |
| ! | ATGAGCTTGGTTCAAGTTCA+AGG | + | chr1.4:55628170-55628189 | None:intergenic | 40.0% |
| ! | CAAATTGGCCCTGAAACTTT+TGG | - | chr1.4:55626730-55626749 | MS.gene94802:CDS | 40.0% |
| ! | CATCATTGGGTTAGAAAAGC+AGG | - | chr1.4:55629428-55629447 | MS.gene94802:CDS | 40.0% |
| ! | TATTGACTGCTACGGTAGTA+CGG | - | chr1.4:55627468-55627487 | MS.gene94802:CDS | 40.0% |
| !! | AAGTTCTGAGAATGATAGGC+TGG | + | chr1.4:55628582-55628601 | None:intergenic | 40.0% |
| !! | ACACAGGATTGTTGTTTAGC+AGG | + | chr1.4:55627312-55627331 | None:intergenic | 40.0% |
| !! | CTGCTTTTCTAACCCAATGA+TGG | + | chr1.4:55629430-55629449 | None:intergenic | 40.0% |
| !! | GTAGCACTCTCTATTTTTCC+TGG | + | chr1.4:55628072-55628091 | None:intergenic | 40.0% |
| !! | TGTGAGACTATAGCCTTGTT+TGG | + | chr1.4:55626672-55626691 | None:intergenic | 40.0% |
| AAACAGGCGACTAAGAAGCA+TGG | + | chr1.4:55627918-55627937 | None:intergenic | 45.0% | |
| AAGATCAACGGTGGAGATCA+GGG | - | chr1.4:55629626-55629645 | MS.gene94802:intron | 45.0% | |
| AAGATCACGCTTGTCAAGGA+AGG | + | chr1.4:55628023-55628042 | None:intergenic | 45.0% | |
| AAGTTTCAGGACCTCTGTCA+AGG | - | chr1.4:55628653-55628672 | MS.gene94802:CDS | 45.0% | |
| ACATGTCTGCATACACCAAG+AGG | + | chr1.4:55627349-55627368 | None:intergenic | 45.0% | |
| ACCTTCCACCATACCATCAT+TGG | - | chr1.4:55629414-55629433 | MS.gene94802:CDS | 45.0% | |
| AGCACTGTCTGATACCTAAG+AGG | - | chr1.4:55628139-55628158 | MS.gene94802:intron | 45.0% | |
| AGTTATGTCACCCTTGACAG+AGG | + | chr1.4:55628667-55628686 | None:intergenic | 45.0% | |
| AGTTCCACTCAGTTTGCACT+TGG | + | chr1.4:55628313-55628332 | None:intergenic | 45.0% | |
| AGTTCCACTCAGTTTGCAGT+TGG | + | chr1.4:55628631-55628650 | None:intergenic | 45.0% | |
| AGTTTCAGGACCTCTGTCAA+GGG | - | chr1.4:55628654-55628673 | MS.gene94802:CDS | 45.0% | |
| ATTGACTGCTACGGTAGTAC+GGG | - | chr1.4:55627469-55627488 | MS.gene94802:CDS | 45.0% | |
| CAGTTGTGTGAACTAGAAGG+TGG | - | chr1.4:55627238-55627257 | MS.gene94802:CDS | 45.0% | |
| CATTAGGCGACTTCCACTTT+AGG | - | chr1.4:55629168-55629187 | MS.gene94802:intron | 45.0% | |
| CCTTCCACCATACCATCATT+GGG | - | chr1.4:55629415-55629434 | MS.gene94802:CDS | 45.0% | |
| CGAGACATGTGAGGATAGAT+TGG | + | chr1.4:55628852-55628871 | None:intergenic | 45.0% | |
| CGCTGTCATCCAGAGAAAAT+GGG | + | chr1.4:55629739-55629758 | None:intergenic | 45.0% | |
| CTAACCCAATGATGGTATGG+TGG | + | chr1.4:55629422-55629441 | None:intergenic | 45.0% | |
| CTACCATCATCGTCGTGATA+CGG | - | chr1.4:55629460-55629479 | MS.gene94802:CDS | 45.0% | |
| CTGGTTAAGGATAAGCACCT+AGG | + | chr1.4:55629506-55629525 | None:intergenic | 45.0% | |
| CTTCAGTGCCAATCTTTGAC+TGG | - | chr1.4:55627549-55627568 | MS.gene94802:CDS | 45.0% | |
| GATAATGCAGGCGCCATATA+TGG | + | chr1.4:55629110-55629129 | None:intergenic | 45.0% | |
| GATGATGAGATGGATCGTTG+GGG | + | chr1.4:55625858-55625877 | None:intergenic | 45.0% | |
| GGAATGCGAGAAGAATGATC+TGG | + | chr1.4:55625946-55625965 | None:intergenic | 45.0% | |
| GGGTGAGAAAATTACTCCAC+AGG | - | chr1.4:55628230-55628249 | MS.gene94802:CDS | 45.0% | |
| GGTGACAGTGACATTACTTC+TGG | - | chr1.4:55628357-55628376 | MS.gene94802:intron | 45.0% | |
| GTCAAGGGTGACATAACTCA+TGG | - | chr1.4:55628669-55628688 | MS.gene94802:CDS | 45.0% | |
| GTTCCACTCAGTTTGCACTT+GGG | + | chr1.4:55628312-55628331 | None:intergenic | 45.0% | |
| GTTCCACTCAGTTTGCAGTT+GGG | + | chr1.4:55628630-55628649 | None:intergenic | 45.0% | |
| TACGGTAGTACGGGGTTATA+GGG | - | chr1.4:55627478-55627497 | MS.gene94802:CDS | 45.0% | |
| TAGATTGGAAAGTCGGTGTG+AGG | + | chr1.4:55628837-55628856 | None:intergenic | 45.0% | |
| TAGCTCCAACAGAAGGTGAA+CGG | + | chr1.4:55626958-55626977 | None:intergenic | 45.0% | |
| TATGTTGGAAACTCAGCCTG+TGG | + | chr1.4:55628249-55628268 | None:intergenic | 45.0% | |
| TCAACTGATCGGAGGAACAT+AGG | + | chr1.4:55628804-55628823 | None:intergenic | 45.0% | |
| TCATCAGCTAACCCCCTTAA+AGG | - | chr1.4:55626763-55626782 | MS.gene94802:CDS | 45.0% | |
| TCATTCCGTTCACCTTCTGT+TGG | - | chr1.4:55626950-55626969 | MS.gene94802:CDS | 45.0% | |
| TCGCTGTCATCCAGAGAAAA+TGG | + | chr1.4:55629740-55629759 | None:intergenic | 45.0% | |
| TGACAGCAACAAACACACCA+AGG | + | chr1.4:55627090-55627109 | None:intergenic | 45.0% | |
| TGATCACTGAAGGATGAGCT+TGG | + | chr1.4:55628771-55628790 | None:intergenic | 45.0% | |
| TGATCTCCACCGTTGATCTT+GGG | + | chr1.4:55629626-55629645 | None:intergenic | 45.0% | |
| TTGATATCGGGTCTTCACCA+TGG | + | chr1.4:55629142-55629161 | None:intergenic | 45.0% | |
| TTGCCATGAACGCATGCATT+AGG | + | chr1.4:55626013-55626032 | None:intergenic | 45.0% | |
| ! | AGAACCGATTCCTCTTCTTC+TGG | - | chr1.4:55629022-55629041 | MS.gene94802:intron | 45.0% |
| ! | CCCCAAGGATTTTCACATGA+AGG | - | chr1.4:55627431-55627450 | MS.gene94802:CDS | 45.0% |
| ! | CTCAGATTTTCTTCTGCTCC+AGG | - | chr1.4:55626189-55626208 | MS.gene94802:CDS | 45.0% |
| ! | TCACCCGATTCGAGAAACAT+AGG | + | chr1.4:55628216-55628235 | None:intergenic | 45.0% |
| ! | TCTCCCGATTCGAGAAACAT+AGG | + | chr1.4:55628534-55628553 | None:intergenic | 45.0% |
| !! | ATGGATCGTTGGGGTTAGTT+CGG | + | chr1.4:55625849-55625868 | None:intergenic | 45.0% |
| !! | GGTGCTGTTATACTGTACTG+AGG | + | chr1.4:55628291-55628310 | None:intergenic | 45.0% |
| AACACAGGTCGAGACATGTG+AGG | + | chr1.4:55628861-55628880 | None:intergenic | 50.0% | |
| ACGGTAGTACGGGGTTATAG+GGG | - | chr1.4:55627479-55627498 | MS.gene94802:CDS | 50.0% | |
| ACTGATCGGAGGAACATAGG+AGG | + | chr1.4:55628801-55628820 | None:intergenic | 50.0% | |
| AGATCAACGGTGGAGATCAG+GGG | - | chr1.4:55629627-55629646 | MS.gene94802:intron | 50.0% | |
| ATAAGGGTGAGGGCCTAAAG+TGG | + | chr1.4:55629184-55629203 | None:intergenic | 50.0% | |
| ATGGTTGGGACTAAGAAGGG+CGG | - | chr1.4:55626881-55626900 | MS.gene94802:CDS | 50.0% | |
| CAAGATCAACGGTGGAGATC+AGG | - | chr1.4:55629625-55629644 | MS.gene94802:intron | 50.0% | |
| CCTAGGTGAAGATGAAAGCC+AGG | + | chr1.4:55629489-55629508 | None:intergenic | 50.0% | |
| CTACGGTAGTACGGGGTTAT+AGG | - | chr1.4:55627477-55627496 | MS.gene94802:CDS | 50.0% | |
| CTGATCTCCACCGTTGATCT+TGG | + | chr1.4:55629627-55629646 | None:intergenic | 50.0% | |
| CTTCCGTATCACGACGATGA+TGG | + | chr1.4:55629466-55629485 | None:intergenic | 50.0% | |
| GCAGAAGATCACGCTTGTCA+AGG | + | chr1.4:55628027-55628046 | None:intergenic | 50.0% | |
| GCGTCCATTGTCTCTTTGCA+TGG | + | chr1.4:55629717-55629736 | None:intergenic | 50.0% | |
| GTCACTGTCACCCTTGACAT+AGG | + | chr1.4:55628349-55628368 | None:intergenic | 50.0% | |
| GTGAGAAGGACAATGCTGTC+TGG | + | chr1.4:55629325-55629344 | None:intergenic | 50.0% | |
| TATGAGCCCAAGATCAACGG+TGG | - | chr1.4:55629617-55629636 | MS.gene94802:intron | 50.0% | |
| TCAGCTTCAGTTCGGAACAC+AGG | + | chr1.4:55628876-55628895 | None:intergenic | 50.0% | |
| TCTCAAGGTTGTGGACCTTG+TGG | - | chr1.4:55627395-55627414 | MS.gene94802:CDS | 50.0% | |
| TTGACTGCTACGGTAGTACG+GGG | - | chr1.4:55627470-55627489 | MS.gene94802:CDS | 50.0% | |
| ! | ACGACGATGATGGTAGTCAC+AGG | + | chr1.4:55629456-55629475 | None:intergenic | 50.0% |
| ! | CAATGGACGCCCATTTTCTC+TGG | - | chr1.4:55629727-55629746 | MS.gene94802:CDS | 50.0% |
| ! | CCCAATGATGGTATGGTGGA+AGG | + | chr1.4:55629418-55629437 | None:intergenic | 50.0% |
| ! | CCTGGCTTTCATCTTCACCT+AGG | - | chr1.4:55629486-55629505 | MS.gene94802:intron | 50.0% |
| !! | GGTTTGATGGTGTCACCACA+AGG | + | chr1.4:55627413-55627432 | None:intergenic | 50.0% |
| !! | TGGATCGTTGGGGTTAGTTC+GGG | + | chr1.4:55625848-55625867 | None:intergenic | 50.0% |
| AGAAGGGCGGCAACTCTTCA+AGG | - | chr1.4:55626894-55626913 | MS.gene94802:CDS | 55.0% | |
| AGTCAGCGCTCATCGGAAAC+AGG | + | chr1.4:55627934-55627953 | None:intergenic | 55.0% | |
| ATCGTCGTGATACGGAAGCC+TGG | - | chr1.4:55629468-55629487 | MS.gene94802:CDS | 55.0% | |
| GATCAACGGTGGAGATCAGG+GGG | - | chr1.4:55629628-55629647 | MS.gene94802:intron | 55.0% | |
| GCACCCAACTGCAAACTGAG+TGG | - | chr1.4:55628624-55628643 | MS.gene94802:intron | 55.0% | |
| GCACCCAAGTGCAAACTGAG+TGG | - | chr1.4:55628306-55628325 | MS.gene94802:intron | 55.0% | |
| GGTGACACCATCAAACCCCA+AGG | - | chr1.4:55627416-55627435 | MS.gene94802:CDS | 55.0% | |
| TAGGCTGGAAACTCGGCATG+TGG | + | chr1.4:55628567-55628586 | None:intergenic | 55.0% | |
| TCAGTGCAGTCAGCGCTCAT+CGG | + | chr1.4:55627941-55627960 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 55625826 | 55629802 | 55625826 | ID=MS.gene94802 |
| chr1.4 | mRNA | 55625826 | 55629802 | 55625826 | ID=MS.gene94802.t1;Parent=MS.gene94802 |
| chr1.4 | exon | 55629637 | 55629802 | 55629637 | ID=MS.gene94802.t1.exon1;Parent=MS.gene94802.t1 |
| chr1.4 | CDS | 55629637 | 55629802 | 55629637 | ID=cds.MS.gene94802.t1;Parent=MS.gene94802.t1 |
| chr1.4 | exon | 55629358 | 55629495 | 55629358 | ID=MS.gene94802.t1.exon2;Parent=MS.gene94802.t1 |
| chr1.4 | CDS | 55629358 | 55629495 | 55629358 | ID=cds.MS.gene94802.t1;Parent=MS.gene94802.t1 |
| chr1.4 | exon | 55628639 | 55628764 | 55628639 | ID=MS.gene94802.t1.exon3;Parent=MS.gene94802.t1 |
| chr1.4 | CDS | 55628639 | 55628764 | 55628639 | ID=cds.MS.gene94802.t1;Parent=MS.gene94802.t1 |
| chr1.4 | exon | 55628176 | 55628265 | 55628176 | ID=MS.gene94802.t1.exon4;Parent=MS.gene94802.t1 |
| chr1.4 | CDS | 55628176 | 55628265 | 55628176 | ID=cds.MS.gene94802.t1;Parent=MS.gene94802.t1 |
| chr1.4 | exon | 55627799 | 55627904 | 55627799 | ID=MS.gene94802.t1.exon5;Parent=MS.gene94802.t1 |
| chr1.4 | CDS | 55627799 | 55627904 | 55627799 | ID=cds.MS.gene94802.t1;Parent=MS.gene94802.t1 |
| chr1.4 | exon | 55627661 | 55627727 | 55627661 | ID=MS.gene94802.t1.exon6;Parent=MS.gene94802.t1 |
| chr1.4 | CDS | 55627661 | 55627727 | 55627661 | ID=cds.MS.gene94802.t1;Parent=MS.gene94802.t1 |
| chr1.4 | exon | 55625826 | 55627577 | 55625826 | ID=MS.gene94802.t1.exon7;Parent=MS.gene94802.t1 |
| chr1.4 | CDS | 55625826 | 55627577 | 55625826 | ID=cds.MS.gene94802.t1;Parent=MS.gene94802.t1 |
| Gene Sequence |
| Protein sequence |
