Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059018.t1 | KEH42421.1 | 93.6 | 814 | 49 | 1 | 1 | 814 | 8 | 818 | 0.00E+00 | 1541.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059018.t1 | A0A072VLF2 | 93.6 | 814 | 49 | 1 | 1 | 814 | 8 | 818 | 0.0e+00 | 1541.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050114 | MS.gene059018 | 0.801169 | 1.02E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene059018 | 0.813273 | 2.78E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene059018 | -0.800296 | 1.54E-48 | -1.69E-46 |
| MS.gene059018 | MS.gene061966 | 0.807411 | 5.12E-50 | -1.69E-46 |
| MS.gene059018 | MS.gene07088 | 0.804509 | 2.09E-49 | -1.69E-46 |
| MS.gene059018 | MS.gene072951 | 0.804685 | 1.92E-49 | -1.69E-46 |
| MS.gene059018 | MS.gene26426 | 0.801414 | 9.11E-49 | -1.69E-46 |
| MS.gene059018 | MS.gene53922 | 0.803281 | 3.76E-49 | -1.69E-46 |
| MS.gene059018 | MS.gene67141 | 0.803559 | 3.29E-49 | -1.69E-46 |
| MS.gene059018 | MS.gene75229 | 0.80224 | 6.16E-49 | -1.69E-46 |
| MS.gene059018 | MS.gene81381 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene059018 | MS.gene87972 | 0.803198 | 3.91E-49 | -1.69E-46 |
| MS.gene059018 | MS.gene92186 | 0.813376 | 2.64E-51 | -1.69E-46 |
| MS.gene059018 | MS.gene94802 | 0.819037 | 1.43E-52 | -1.69E-46 |
| MS.gene059018 | MS.gene97411 | 0.813639 | 2.31E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059018.t1 | MTR_1g069195 | 93.612 | 814 | 49 | 1 | 1 | 814 | 8 | 818 | 0.0 | 1559 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 163 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGGGTAGCTGTAAATTTC+TGG | 0.150392 | 1.2:+51998032 | None:intergenic |
| TCGCTGTCATCCAGAGAAAA+TGG | 0.235293 | 1.2:+51997850 | None:intergenic |
| GTCATCAAATTCAGGCTTCT+TGG | 0.244987 | 1.2:+52001351 | None:intergenic |
| TCTGGTTCTTCTTCAAATCT+AGG | 0.251463 | 1.2:+52001664 | None:intergenic |
| ATGTGGTTTGTCAAGTAATA+AGG | 0.251521 | 1.2:+51998389 | None:intergenic |
| CTGATCTCCACCGTTGATCT+TGG | 0.261461 | 1.2:+51997963 | None:intergenic |
| GAACATGGTTTCTCAGTATC+AGG | 0.270812 | 1.2:+51999786 | None:intergenic |
| TGAGTGGAACTCCAAGTTTC+AGG | 0.273294 | 1.2:-51998947 | MS.gene059018:CDS |
| TTGAAACAGTCATCAAATTC+AGG | 0.288887 | 1.2:+52001343 | None:intergenic |
| AGTTCAAGAAGTTTCCTCTT+AGG | 0.290857 | 1.2:+51999116 | None:intergenic |
| AGTTCAAGAAGTTTCCTCTT+AGG | 0.290857 | 1.2:+51999434 | None:intergenic |
| GTCTCCTATGTTTCTCGAAT+CGG | 0.297526 | 1.2:-51999378 | MS.gene059018:CDS |
| ACATGACTTCAATTCAGTTT+TGG | 0.308557 | 1.2:-51998370 | MS.gene059018:CDS |
| GATAATGCAGGCGCCATATA+TGG | 0.309319 | 1.2:+51998480 | None:intergenic |
| ATGGATCGTTCGGGTTAGTT+CGG | 0.312489 | 1.2:+52001743 | None:intergenic |
| AGAACCGATTCCTCTTCTTC+TGG | 0.325587 | 1.2:-51998565 | MS.gene059018:CDS |
| AGAGTCGGATGTTCAATTTA+AGG | 0.327795 | 1.2:-51999471 | MS.gene059018:CDS |
| TAATTATGCAAAACCATATA+TGG | 0.329943 | 1.2:-51998493 | MS.gene059018:CDS |
| GAACAGATGAAGCTTCATTC+TGG | 0.331631 | 1.2:+51998208 | None:intergenic |
| AAACTTCTTGAACTTGAATC+TGG | 0.331714 | 1.2:-51999107 | MS.gene059018:CDS |
| GTCTCCTATGTTTCTCGAAT+CGG | 0.334781 | 1.2:-51999060 | MS.gene059018:CDS |
| TTTCTCAGTATCAGGAAATA+AGG | 0.338149 | 1.2:+51999794 | None:intergenic |
| TGTAAAGATGATCTCCAAAC+TGG | 0.340472 | 1.2:+51998319 | None:intergenic |
| GGTGACAGTGACATTACTTC+TGG | 0.342925 | 1.2:-51999230 | MS.gene059018:CDS |
| TTCAGGCTTCTTGGATGATA+AGG | 0.346263 | 1.2:+52001360 | None:intergenic |
| GCCTGGCTTTCATCTTCACC+TGG | 0.350089 | 1.2:-51998102 | MS.gene059018:CDS |
| AGAATCAAGCAGACTATATC+TGG | 0.351064 | 1.2:+51999178 | None:intergenic |
| CCTAATGAATCATTTGATAT+CGG | 0.351332 | 1.2:+51998435 | None:intergenic |
| ACCTTCATGTGAAAATCCTT+GGG | 0.360869 | 1.2:+52000155 | None:intergenic |
| ACCTTCCACCATACCATCAT+TGG | 0.362925 | 1.2:-51998173 | MS.gene059018:CDS |
| GAATGAAGCTTCATCTGTTC+AGG | 0.363224 | 1.2:-51998205 | MS.gene059018:CDS |
| ATTTGATCGTGAACTGGTTA+AGG | 0.366460 | 1.2:+51998071 | None:intergenic |
| AGAATCAAGTAAATCGTATC+TGG | 0.371972 | 1.2:+51999496 | None:intergenic |
| CAAGATCAACGGTGGAGATC+AGG | 0.376764 | 1.2:-51997962 | MS.gene059018:CDS |
| AAATATCAAAAGCCCCAGTT+TGG | 0.384262 | 1.2:-51998333 | MS.gene059018:CDS |
| TGGATCGTTCGGGTTAGTTC+GGG | 0.384716 | 1.2:+52001744 | None:intergenic |
| AGATGTTTCCATCTTCATAC+TGG | 0.391341 | 1.2:+51999859 | None:intergenic |
| AACCTTCATGTGAAAATCCT+TGG | 0.397530 | 1.2:+52000154 | None:intergenic |
| CTGGTTCTTCTTCAAATCTA+GGG | 0.407833 | 1.2:+52001665 | None:intergenic |
| AGATGATGAGATGGATCGTT+CGG | 0.407953 | 1.2:+52001733 | None:intergenic |
| TGAAAATCCTTGGGGTTTGA+TGG | 0.412885 | 1.2:+52000164 | None:intergenic |
| CATTAGGCGACTTCCACTTT+AGG | 0.414628 | 1.2:-51998419 | MS.gene059018:CDS |
| TTGAAAGTTCTGAGAATGAT+AGG | 0.414987 | 1.2:+51999004 | None:intergenic |
| TGATCTCCACCGTTGATCTT+GGG | 0.425315 | 1.2:+51997964 | None:intergenic |
| TCTCCTATGTTTCTCGAATC+GGG | 0.425654 | 1.2:-51999377 | MS.gene059018:CDS |
| TTACAAGGATGATGAAGAAA+TGG | 0.431696 | 1.2:-51998301 | MS.gene059018:CDS |
| TCGGTAATTTGATCGTGAAC+TGG | 0.436035 | 1.2:+51998065 | None:intergenic |
| CGAGACATGTGAGGATAGAT+TGG | 0.438266 | 1.2:+51998738 | None:intergenic |
| ACTGGATCATTTCAATGAGC+TGG | 0.438597 | 1.2:-51998601 | MS.gene059018:CDS |
| ACTGAAGCTGAAAGCGAACT+TGG | 0.441025 | 1.2:-51998702 | MS.gene059018:CDS |
| AGTCAGCGCTCATCGGAAAC+AGG | 0.442148 | 1.2:+51999656 | None:intergenic |
| TTGACAGAGGTCCTGAAACT+TGG | 0.444709 | 1.2:+51998936 | None:intergenic |
| GTTTCCTCTTAGTTATCTGT+TGG | 0.446193 | 1.2:+51998856 | None:intergenic |
| AGTTCCACTCAGTTTGCACT+TGG | 0.447002 | 1.2:+51999277 | None:intergenic |
| GTTCCACTCAGTTTGCAGTT+GGG | 0.451749 | 1.2:+51998960 | None:intergenic |
| AGTTCCACTCAGTTTGCAGT+TGG | 0.452830 | 1.2:+51998959 | None:intergenic |
| TCTCCTATGTTTCTCGAATC+GGG | 0.452853 | 1.2:-51999059 | MS.gene059018:CDS |
| CGCTGTCATCCAGAGAAAAT+GGG | 0.453700 | 1.2:+51997851 | None:intergenic |
| CATCATTGGGTTAGAAAAGC+AGG | 0.455110 | 1.2:-51998159 | MS.gene059018:CDS |
| ATGAGCTTGGTTCAAGTTCA+AGG | 0.455508 | 1.2:+51998832 | None:intergenic |
| CTAATGAATCATTTGATATC+GGG | 0.456268 | 1.2:+51998436 | None:intergenic |
| TTGACATAGGTGCTAAAACT+TGG | 0.458959 | 1.2:+51999254 | None:intergenic |
| TCATTCCGTTCACCTTCTGT+TGG | 0.460362 | 1.2:-52000639 | MS.gene059018:CDS |
| TTTGCATAATTACAAGTGAC+AGG | 0.468308 | 1.2:+51998504 | None:intergenic |
| TTTCTTTAAGAAATTGAAGA+AGG | 0.469732 | 1.2:-52001431 | MS.gene059018:CDS |
| AGAAGGGCGGCAACTCTTCA+AGG | 0.471423 | 1.2:-52000695 | MS.gene059018:CDS |
| AGAGAGAACTGATGATGTTA+TGG | 0.490339 | 1.2:-52000727 | MS.gene059018:CDS |
| CCGATATCAAATGATTCATT+AGG | 0.494678 | 1.2:-51998435 | MS.gene059018:CDS |
| CCTTCCACCATACCATCATT+GGG | 0.496186 | 1.2:-51998172 | MS.gene059018:CDS |
| AAATACGAGGAACCAAATCC+AGG | 0.496894 | 1.2:-51999536 | MS.gene059018:CDS |
| CTGGATCATTTCAATGAGCT+GGG | 0.498083 | 1.2:-51998600 | MS.gene059018:CDS |
| GCGTCCATTGTCTCTTTGCA+TGG | 0.499717 | 1.2:+51997873 | None:intergenic |
| GATGATGAGATGGATCGTTC+GGG | 0.502684 | 1.2:+52001734 | None:intergenic |
| GTTGGAGCTATGAATAAGTC+AGG | 0.504292 | 1.2:-52000621 | MS.gene059018:intron |
| TCAGGAAACCAGTATGAAGA+TGG | 0.505276 | 1.2:-51999867 | MS.gene059018:intron |
| CTTCCGTATCACGACGATGA+TGG | 0.505616 | 1.2:+51998124 | None:intergenic |
| GTTCGCTTTCAGCTTCAGTT+CGG | 0.508275 | 1.2:+51998706 | None:intergenic |
| CCCAGGTGAAGATGAAAGCC+AGG | 0.510117 | 1.2:+51998101 | None:intergenic |
| AACTCCAACAGATAACTAAG+AGG | 0.512841 | 1.2:-51998860 | MS.gene059018:CDS |
| GTTTCCTCTTAGGTATCTGA+TGG | 0.514870 | 1.2:+51999126 | None:intergenic |
| CTACCATCATCGTCGTGATA+CGG | 0.517064 | 1.2:-51998127 | MS.gene059018:CDS |
| TTCTGACGAAGATGATGAGA+TGG | 0.523413 | 1.2:+52001724 | None:intergenic |
| AAGATCAACGGTGGAGATCA+GGG | 0.525662 | 1.2:-51997961 | MS.gene059018:CDS |
| TTGTCTAACCCTTTCGAACA+TGG | 0.526029 | 1.2:+51999771 | None:intergenic |
| GTTTGGAGATCATCTTTACA+AGG | 0.526410 | 1.2:-51998316 | MS.gene059018:CDS |
| TGTGGTTTGTCAAGTAATAA+GGG | 0.526462 | 1.2:+51998390 | None:intergenic |
| AACTCCATCAGATACCTAAG+AGG | 0.528516 | 1.2:-51999130 | MS.gene059018:CDS |
| CTCATACTTCAATGATCAGA+TGG | 0.533540 | 1.2:-51999084 | MS.gene059018:CDS |
| GAATTTGATGACTGTTTCAA+AGG | 0.534220 | 1.2:-52001340 | MS.gene059018:intron |
| AAGTTTCAGGACCTCTGTCA+AGG | 0.541938 | 1.2:-51998934 | MS.gene059018:CDS |
| GTTCCACTCAGTTTGCACTT+GGG | 0.542296 | 1.2:+51999278 | None:intergenic |
| TGGTCTAAAATTGATAATGC+AGG | 0.542600 | 1.2:+51998468 | None:intergenic |
| TGTTATGGTTGGGACTAAGA+AGG | 0.545123 | 1.2:-52000712 | MS.gene059018:CDS |
| TCACCCGATTCGAGAAACAT+AGG | 0.545217 | 1.2:+51999374 | None:intergenic |
| TTTCTAACCCAATGATGGTA+TGG | 0.546372 | 1.2:+51998165 | None:intergenic |
| TCAACTGATCGGAGGAACAT+AGG | 0.547048 | 1.2:+51998786 | None:intergenic |
| ATCGTCGTGATACGGAAGCC+TGG | 0.549204 | 1.2:-51998119 | MS.gene059018:CDS |
| CTGAGAAACCATGTTCGAAA+GGG | 0.550624 | 1.2:-51999779 | MS.gene059018:intron |
| AAGTTCTGAGAATGATAGGC+TGG | 0.557476 | 1.2:+51999008 | None:intergenic |
| TTTACTTGATTCTCGAGAGT+CGG | 0.559060 | 1.2:-51999486 | MS.gene059018:CDS |
| TGATCATTGAAGTATGAGCT+TGG | 0.559791 | 1.2:+51999407 | None:intergenic |
| GTAGTGTTTATTGTGTGAGA+AGG | 0.560569 | 1.2:+51998251 | None:intergenic |
| TCTGTGCAGTCAGCGCTCAT+CGG | 0.564372 | 1.2:+51999649 | None:intergenic |
| GGAGTTATATATTTGAACAA+AGG | 0.565537 | 1.2:+51997912 | None:intergenic |
| ACTGAGAAACCATGTTCGAA+AGG | 0.568445 | 1.2:-51999780 | MS.gene059018:CDS |
| AAAACTGAATTGAAGTCATG+TGG | 0.571542 | 1.2:+51998372 | None:intergenic |
| GGTTTGATGGTGTCACCACA+AGG | 0.572380 | 1.2:+52000177 | None:intergenic |
| GTAAAGATGATCTCCAAACT+GGG | 0.572413 | 1.2:+51998320 | None:intergenic |
| GTGAGGATAGATTGGAAAGT+CGG | 0.572970 | 1.2:+51998746 | None:intergenic |
| AGAACTGATGATGTTATGGT+TGG | 0.572989 | 1.2:-52000723 | MS.gene059018:CDS |
| CCCAATGATGGTATGGTGGA+AGG | 0.573459 | 1.2:+51998172 | None:intergenic |
| TCAGCTTCAGTTCGGAACAC+AGG | 0.573751 | 1.2:+51998714 | None:intergenic |
| CCTGGCTTTCATCTTCACCT+GGG | 0.574083 | 1.2:-51998101 | MS.gene059018:CDS |
| GGGTGAGAAAATTACTCCAC+AGG | 0.579260 | 1.2:-51999357 | MS.gene059018:CDS |
| TAGATTGGAAAGTCGGTGTG+AGG | 0.580475 | 1.2:+51998753 | None:intergenic |
| TGATCACTGAAGGATGAGCT+TGG | 0.580581 | 1.2:+51998819 | None:intergenic |
| AGCACTGTCTGATACCTAAG+AGG | 0.580939 | 1.2:-51999448 | MS.gene059018:CDS |
| TCTCCCGATTCGAGAAACAT+AGG | 0.582033 | 1.2:+51999056 | None:intergenic |
| TTTGTCAAGTAATAAGGGTG+AGG | 0.582048 | 1.2:+51998395 | None:intergenic |
| AAGTTCTGAGAATGATATGT+TGG | 0.582909 | 1.2:+51999326 | None:intergenic |
| ATAAGGGTGAGGGCCTAAAG+TGG | 0.584494 | 1.2:+51998406 | None:intergenic |
| CCTTCATGTGAAAATCCTTG+GGG | 0.584652 | 1.2:+52000156 | None:intergenic |
| AGTATCAGGAAATAAGGTAT+CGG | 0.584922 | 1.2:+51999800 | None:intergenic |
| GTCAAGGGTGACATAACTCA+TGG | 0.593911 | 1.2:-51998918 | MS.gene059018:CDS |
| AGTTTCAGGACCTCTGTCAA+GGG | 0.594202 | 1.2:-51998933 | MS.gene059018:CDS |
| TTGATATCGGGTCTTCACCA+TGG | 0.594260 | 1.2:+51998448 | None:intergenic |
| GGAATGCGAGAAGAATGATC+TGG | 0.599342 | 1.2:+52001646 | None:intergenic |
| GAACTGATGATGTTATGGTT+GGG | 0.602008 | 1.2:-52000722 | MS.gene059018:CDS |
| ATGTCCATGCAAAGAGACAA+TGG | 0.602706 | 1.2:-51997877 | MS.gene059018:CDS |
| AGAATGATAGGCTGGAAACT+CGG | 0.603792 | 1.2:+51999016 | None:intergenic |
| TTGTCAAGTAATAAGGGTGA+GGG | 0.604929 | 1.2:+51998396 | None:intergenic |
| GTTATGGTTGGGACTAAGAA+GGG | 0.609027 | 1.2:-52000711 | MS.gene059018:CDS |
| GTCACTGTCACCCTTGACAT+AGG | 0.610991 | 1.2:+51999241 | None:intergenic |
| CATTATGAGCCCAAGATCAA+CGG | 0.614329 | 1.2:-51997973 | MS.gene059018:CDS |
| AGGCAACAAATGATCACTGA+AGG | 0.615694 | 1.2:+51998809 | None:intergenic |
| CTGGTTAAGGATAAGCACCC+AGG | 0.615749 | 1.2:+51998084 | None:intergenic |
| CTAACCCAATGATGGTATGG+TGG | 0.617687 | 1.2:+51998168 | None:intergenic |
| AATTTCTGGAAATCGAACTT+CGG | 0.621260 | 1.2:+51998046 | None:intergenic |
| TCTCAAGGTTGTGGACCTTG+TGG | 0.621786 | 1.2:-52000192 | MS.gene059018:CDS |
| AAACAGGCGACTAAGAAGCA+TGG | 0.626587 | 1.2:+51999672 | None:intergenic |
| TTATTCATAGCTCCAACAGA+AGG | 0.626831 | 1.2:+52000627 | None:intergenic |
| TAGCTCCAACAGAAGGTGAA+CGG | 0.632814 | 1.2:+52000634 | None:intergenic |
| ACGACGATGATGGTAGTCAC+AGG | 0.633957 | 1.2:+51998134 | None:intergenic |
| TAGGCTGGAAACTCGGCATG+TGG | 0.634219 | 1.2:+51999023 | None:intergenic |
| AGATCAACGGTGGAGATCAG+GGG | 0.636017 | 1.2:-51997960 | MS.gene059018:CDS |
| CATGGACATATGAAGACATG+AGG | 0.646261 | 1.2:+51997891 | None:intergenic |
| GAGTAATTAAGTCAACTGAT+CGG | 0.652391 | 1.2:+51998775 | None:intergenic |
| GATCAACGGTGGAGATCAGG+GGG | 0.659322 | 1.2:-51997959 | MS.gene059018:CDS |
| GCACCCAACTGCAAACTGAG+TGG | 0.662121 | 1.2:-51998963 | MS.gene059018:CDS |
| GCACCCAAGTGCAAACTGAG+TGG | 0.664604 | 1.2:-51999281 | MS.gene059018:CDS |
| GGTGCTGTTATACTGTACTG+AGG | 0.674111 | 1.2:+51998981 | None:intergenic |
| TATGAGCCCAAGATCAACGG+TGG | 0.678212 | 1.2:-51997970 | MS.gene059018:CDS |
| TGGATCATTTCAATGAGCTG+GGG | 0.679444 | 1.2:-51998599 | MS.gene059018:CDS |
| AGTTATGTCACCCTTGACAG+AGG | 0.687435 | 1.2:+51998923 | None:intergenic |
| ACTGATCGGAGGAACATAGG+AGG | 0.692990 | 1.2:+51998789 | None:intergenic |
| TAATTAAGTCAACTGATCGG+AGG | 0.694905 | 1.2:+51998778 | None:intergenic |
| TAAAGATGATCTCCAAACTG+GGG | 0.703480 | 1.2:+51998321 | None:intergenic |
| TATGTTGGAAACTCAGCCTG+TGG | 0.704608 | 1.2:+51999341 | None:intergenic |
| GGTGACACCATCAAACCCCA+AGG | 0.709681 | 1.2:-52000171 | MS.gene059018:CDS |
| ATGGTTGGGACTAAGAAGGG+CGG | 0.710065 | 1.2:-52000708 | MS.gene059018:CDS |
| AACACAGGTCGAGACATGTG+AGG | 0.715176 | 1.2:+51998729 | None:intergenic |
| ATCTTCTGTTCAGAAATACG+AGG | 0.745830 | 1.2:-51999549 | MS.gene059018:intron |
| GTGAGAAGGACAATGCTGTG+TGG | 0.798297 | 1.2:+51998265 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTAAATTCATAATTTTA+AGG | - | chr1.2:51999584-51999603 | MS.gene059018:intron | 10.0% |
| !!! | AAAATATATCTTTTAAGTGA+TGG | + | chr1.2:51998814-51998833 | None:intergenic | 15.0% |
| !!! | GTATCATATTTTCTATTTAT+TGG | + | chr1.2:51999036-51999055 | None:intergenic | 15.0% |
| !! | AAGATTAATTAACAAATGAG+TGG | + | chr1.2:51999561-51999580 | None:intergenic | 20.0% |
| !! | ACATAATGATCATAAGTATT+AGG | + | chr1.2:51998997-51999016 | None:intergenic | 20.0% |
| !! | ACTTGAATTATGTATTTGTT+TGG | - | chr1.2:51998261-51998280 | MS.gene059018:CDS | 20.0% |
| !! | CATAATGATCATAAGTATTA+GGG | + | chr1.2:51998996-51999015 | None:intergenic | 20.0% |
| !! | CTCAAATATAATCAGTAAAT+GGG | + | chr1.2:51999638-51999657 | None:intergenic | 20.0% |
| !! | GAAACTGAAAATTGAAATTA+TGG | + | chr1.2:51999273-51999292 | None:intergenic | 20.0% |
| !! | GTTACCATTTGAATAAAATA+GGG | - | chr1.2:51999852-51999871 | MS.gene059018:CDS | 20.0% |
| !! | TAATTATGCAAAACCATATA+TGG | - | chr1.2:52001077-52001096 | MS.gene059018:intron | 20.0% |
| !! | TCTCAAATATAATCAGTAAA+TGG | + | chr1.2:51999639-51999658 | None:intergenic | 20.0% |
| !!! | AAATAAGGTTTGTTTCAATT+GGG | - | chr1.2:51998470-51998489 | MS.gene059018:CDS | 20.0% |
| !!! | AAATCCCTATTTTATTCAAA+TGG | + | chr1.2:51999859-51999878 | None:intergenic | 20.0% |
| !!! | AACAAATATTTTGTATTGTG+TGG | - | chr1.2:51999144-51999163 | MS.gene059018:CDS | 20.0% |
| !!! | AATTGAAACAAACCTTATTT+GGG | + | chr1.2:51998470-51998489 | None:intergenic | 20.0% |
| !!! | TTTCTTTAAGAAATTGAAGA+AGG | - | chr1.2:51998139-51998158 | MS.gene059018:CDS | 20.0% |
| ! | AAAATTGAAATTATGGAGGT+GGG | + | chr1.2:51999266-51999285 | None:intergenic | 25.0% |
| ! | ACTGAAAATTGAAATTATGG+AGG | + | chr1.2:51999270-51999289 | None:intergenic | 25.0% |
| ! | CAATTGAAACAAACCTTATT+TGG | + | chr1.2:51998471-51998490 | None:intergenic | 25.0% |
| ! | CCTAATGAATCATTTGATAT+CGG | + | chr1.2:52001138-52001157 | None:intergenic | 25.0% |
| ! | CGTTACCATTTGAATAAAAT+AGG | - | chr1.2:51999851-51999870 | MS.gene059018:CDS | 25.0% |
| ! | CTAATGAATCATTTGATATC+GGG | + | chr1.2:52001137-52001156 | None:intergenic | 25.0% |
| ! | GGAGTTATATATTTGAACAA+AGG | + | chr1.2:52001661-52001680 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATCCAAAT+TGG | - | chr1.2:51998696-51998715 | MS.gene059018:CDS | 25.0% |
| ! | TTATTTATGCTGAGAATTTG+AGG | - | chr1.2:51998071-51998090 | MS.gene059018:CDS | 25.0% |
| ! | TTTCAGTACATCTACAATTA+GGG | + | chr1.2:51998791-51998810 | None:intergenic | 25.0% |
| !! | CAAATAAGGTTTGTTTCAAT+TGG | - | chr1.2:51998469-51998488 | MS.gene059018:CDS | 25.0% |
| !! | GAATAAAATAGGGATTTTTC+AGG | - | chr1.2:51999862-51999881 | MS.gene059018:CDS | 25.0% |
| !! | TGTTTTCATATAAGCTATTC+TGG | - | chr1.2:51998380-51998399 | MS.gene059018:CDS | 25.0% |
| !! | TTTTTGAATAACTAGCAAGT+AGG | + | chr1.2:51999116-51999135 | None:intergenic | 25.0% |
| AAAACTGAATTGAAGTCATG+TGG | + | chr1.2:52001201-52001220 | None:intergenic | 30.0% | |
| AAACTTCTTGAACTTGAATC+TGG | - | chr1.2:52000463-52000482 | MS.gene059018:intron | 30.0% | |
| AATAAGCTGAAAACAACTTG+TGG | - | chr1.2:51998415-51998434 | MS.gene059018:CDS | 30.0% | |
| AATTTACTTCATGGTACTTC+AGG | - | chr1.2:51999685-51999704 | MS.gene059018:CDS | 30.0% | |
| AGAATCAAGTAAATCGTATC+TGG | + | chr1.2:52000077-52000096 | None:intergenic | 30.0% | |
| AGTATCAGGAAATAAGGTAT+CGG | + | chr1.2:51999773-51999792 | None:intergenic | 30.0% | |
| ATCAGCATAAATCCTTTAAG+GGG | + | chr1.2:51998759-51998778 | None:intergenic | 30.0% | |
| ATTGTTAGACCAAAAGTTTC+AGG | + | chr1.2:51998723-51998742 | None:intergenic | 30.0% | |
| CATCAGCATAAATCCTTTAA+GGG | + | chr1.2:51998760-51998779 | None:intergenic | 30.0% | |
| CCGATATCAAATGATTCATT+AGG | - | chr1.2:52001135-52001154 | MS.gene059018:intron | 30.0% | |
| GAAAATTGAAATTATGGAGG+TGG | + | chr1.2:51999267-51999286 | None:intergenic | 30.0% | |
| GAGTAATTAAGTCAACTGAT+CGG | + | chr1.2:52000798-52000817 | None:intergenic | 30.0% | |
| GTTTCAGTACATCTACAATT+AGG | + | chr1.2:51998792-51998811 | None:intergenic | 30.0% | |
| TAAAGTTGTTCATCCAAACA+AGG | - | chr1.2:51998637-51998656 | MS.gene059018:CDS | 30.0% | |
| TTACAAGGATGATGAAGAAA+TGG | - | chr1.2:52001269-52001288 | MS.gene059018:intron | 30.0% | |
| TTGAAACAGTCATCAAATTC+AGG | + | chr1.2:51998230-51998249 | None:intergenic | 30.0% | |
| TTGTTAGACCAAAAGTTTCA+GGG | + | chr1.2:51998722-51998741 | None:intergenic | 30.0% | |
| TTTCTCAGTATCAGGAAATA+AGG | + | chr1.2:51999779-51999798 | None:intergenic | 30.0% | |
| TTTGCATAATTACAAGTGAC+AGG | + | chr1.2:52001069-52001088 | None:intergenic | 30.0% | |
| ! | AAAGCATACTCAGAAGTTTT+CGG | + | chr1.2:51998122-51998141 | None:intergenic | 30.0% |
| ! | AAAGCATGAAACTTTTACAC+TGG | - | chr1.2:52000951-52000970 | MS.gene059018:intron | 30.0% |
| ! | AAGGATTTATAGCTTTACGA+AGG | + | chr1.2:51999972-51999991 | None:intergenic | 30.0% |
| ! | AATTTCTGGAAATCGAACTT+CGG | + | chr1.2:52001527-52001546 | None:intergenic | 30.0% |
| ! | ACATGACTTCAATTCAGTTT+TGG | - | chr1.2:52001200-52001219 | MS.gene059018:intron | 30.0% |
| ! | ACCATAAGTTTTCCCAAATA+AGG | - | chr1.2:51998455-51998474 | MS.gene059018:CDS | 30.0% |
| ! | ACCTTATTTGGGAAAACTTA+TGG | + | chr1.2:51998459-51998478 | None:intergenic | 30.0% |
| ! | ATGTGGTTTGTCAAGTAATA+AGG | + | chr1.2:52001184-52001203 | None:intergenic | 30.0% |
| ! | GAATTTGATGACTGTTTCAA+AGG | - | chr1.2:51998230-51998249 | MS.gene059018:CDS | 30.0% |
| ! | GCATTATCAATTTTAGACCA+TGG | - | chr1.2:52001105-52001124 | MS.gene059018:intron | 30.0% |
| ! | GGTGTGATTTTGAATTATTC+AGG | - | chr1.2:51998092-51998111 | MS.gene059018:CDS | 30.0% |
| ! | GGTTATTTGAGTTTATCTAC+TGG | - | chr1.2:51998491-51998510 | MS.gene059018:CDS | 30.0% |
| ! | TCAAAAGATCTTTTTCCTCT+TGG | - | chr1.2:51999314-51999333 | MS.gene059018:CDS | 30.0% |
| ! | TGTGGTTTGTCAAGTAATAA+GGG | + | chr1.2:52001183-52001202 | None:intergenic | 30.0% |
| ! | TTTCTTCTTATTGACTGCTA+CGG | - | chr1.2:51999443-51999462 | MS.gene059018:CDS | 30.0% |
| !! | AAATGCTTTTGATTGCACAA+AGG | - | chr1.2:52001029-52001048 | MS.gene059018:intron | 30.0% |
| !! | AAGTTCTGAGAATGATATGT+TGG | + | chr1.2:52000247-52000266 | None:intergenic | 30.0% |
| !! | AGACGTATCAACTTTTAAGA+TGG | - | chr1.2:51998906-51998925 | MS.gene059018:CDS | 30.0% |
| !! | GAGTTACATCATTTTTGTCA+AGG | + | chr1.2:52000909-52000928 | None:intergenic | 30.0% |
| !! | TCATTTTTGTCAAGGTAACT+TGG | + | chr1.2:52000901-52000920 | None:intergenic | 30.0% |
| !! | TGGTCTAAAATTGATAATGC+AGG | + | chr1.2:52001105-52001124 | None:intergenic | 30.0% |
| !! | TTGAAAGTTCTGAGAATGAT+AGG | + | chr1.2:52000251-52000270 | None:intergenic | 30.0% |
| !!! | TTCAATTCAGTTTTGGATTC+TGG | - | chr1.2:52001207-52001226 | MS.gene059018:intron | 30.0% |
| AAATATCAAAAGCCCCAGTT+TGG | - | chr1.2:52001237-52001256 | MS.gene059018:intron | 35.0% | |
| AACCTTCATGTGAAAATCCT+TGG | + | chr1.2:51999419-51999438 | None:intergenic | 35.0% | |
| AACTCCAACAGATAACTAAG+AGG | - | chr1.2:52000710-52000729 | MS.gene059018:CDS | 35.0% | |
| AAGGAAGGAAAGTCATTTGA+AGG | + | chr1.2:51999991-52000010 | None:intergenic | 35.0% | |
| ACATGCTTGTGTCATGTATT+AGG | - | chr1.2:51999191-51999210 | MS.gene059018:CDS | 35.0% | |
| ACCTTCATGTGAAAATCCTT+GGG | + | chr1.2:51999418-51999437 | None:intergenic | 35.0% | |
| ACTAGAAGGTGGTGAAATAT+TGG | - | chr1.2:51999232-51999251 | MS.gene059018:CDS | 35.0% | |
| AGAATCAAGCAGACTATATC+TGG | + | chr1.2:52000395-52000414 | None:intergenic | 35.0% | |
| AGAGTCGGATGTTCAATTTA+AGG | - | chr1.2:52000099-52000118 | MS.gene059018:intron | 35.0% | |
| AGATGTTTCCATCTTCATAC+TGG | + | chr1.2:51999714-51999733 | None:intergenic | 35.0% | |
| AGTTCAAGAAGTTTCCTCTT+AGG | + | chr1.2:52000139-52000158 | None:intergenic | 35.0% | |
| ATCTTCTGTTCAGAAATACG+AGG | - | chr1.2:52000021-52000040 | MS.gene059018:intron | 35.0% | |
| ATTTGATCGTGAACTGGTTA+AGG | + | chr1.2:52001502-52001521 | None:intergenic | 35.0% | |
| CCATCAGCATAAATCCTTTA+AGG | + | chr1.2:51998761-51998780 | None:intergenic | 35.0% | |
| CCTTAAAGGATTTATGCTGA+TGG | - | chr1.2:51998758-51998777 | MS.gene059018:CDS | 35.0% | |
| CTCATACTTCAATGATCAGA+TGG | - | chr1.2:52000486-52000505 | MS.gene059018:intron | 35.0% | |
| GACAAAAATGATGTAACTCG+TGG | - | chr1.2:52000910-52000929 | MS.gene059018:intron | 35.0% | |
| GTAAAGATGATCTCCAAACT+GGG | + | chr1.2:52001253-52001272 | None:intergenic | 35.0% | |
| GTAGTGTTTATTGTGTGAGA+AGG | + | chr1.2:52001322-52001341 | None:intergenic | 35.0% | |
| GTGTGAGACAATTTACTTCA+TGG | - | chr1.2:51999676-51999695 | MS.gene059018:CDS | 35.0% | |
| GTTTCCTCTTAGTTATCTGT+TGG | + | chr1.2:52000717-52000736 | None:intergenic | 35.0% | |
| GTTTGGAGATCATCTTTACA+AGG | - | chr1.2:52001254-52001273 | MS.gene059018:intron | 35.0% | |
| TAAAGATGATCTCCAAACTG+GGG | + | chr1.2:52001252-52001271 | None:intergenic | 35.0% | |
| TAATTAAGTCAACTGATCGG+AGG | + | chr1.2:52000795-52000814 | None:intergenic | 35.0% | |
| TGATCATTGAAGTATGAGCT+TGG | + | chr1.2:52000166-52000185 | None:intergenic | 35.0% | |
| TGTAAAGATGATCTCCAAAC+TGG | + | chr1.2:52001254-52001273 | None:intergenic | 35.0% | |
| TTATTCATAGCTCCAACAGA+AGG | + | chr1.2:51998946-51998965 | None:intergenic | 35.0% | |
| TTGACATAGGTGCTAAAACT+TGG | + | chr1.2:52000319-52000338 | None:intergenic | 35.0% | |
| TTGTCAAGTAATAAGGGTGA+GGG | + | chr1.2:52001177-52001196 | None:intergenic | 35.0% | |
| TTTACTTGATTCTCGAGAGT+CGG | - | chr1.2:52000084-52000103 | MS.gene059018:intron | 35.0% | |
| TTTCTAACCCAATGATGGTA+TGG | + | chr1.2:52001408-52001427 | None:intergenic | 35.0% | |
| TTTGTCAAGTAATAAGGGTG+AGG | + | chr1.2:52001178-52001197 | None:intergenic | 35.0% | |
| ! | AAGCTATTCTGGAAAGCTTA+TGG | - | chr1.2:51998391-51998410 | MS.gene059018:CDS | 35.0% |
| ! | AGAACTGATGATGTTATGGT+TGG | - | chr1.2:51998847-51998866 | MS.gene059018:CDS | 35.0% |
| ! | AGAGAGAACTGATGATGTTA+TGG | - | chr1.2:51998843-51998862 | MS.gene059018:CDS | 35.0% |
| ! | CGAAGACATATTTTCGCTTT+CGG | + | chr1.2:52001559-52001578 | None:intergenic | 35.0% |
| ! | CTGGTTCTTCTTCAAATCTA+GGG | + | chr1.2:51997908-51997927 | None:intergenic | 35.0% |
| ! | GAACTGATGATGTTATGGTT+GGG | - | chr1.2:51998848-51998867 | MS.gene059018:CDS | 35.0% |
| ! | GAAGACATATTTTCGCTTTC+GGG | + | chr1.2:52001558-52001577 | None:intergenic | 35.0% |
| ! | GCAACATTTTCTCTCTGTAA+TGG | + | chr1.2:51997948-51997967 | None:intergenic | 35.0% |
| ! | GGAAAAAGATCTTTTGACAC+AGG | + | chr1.2:51999311-51999330 | None:intergenic | 35.0% |
| ! | TCAGCATAAATCCTTTAAGG+GGG | + | chr1.2:51998758-51998777 | None:intergenic | 35.0% |
| ! | TTGATGACTGTTTCAAAGGT+TGG | - | chr1.2:51998234-51998253 | MS.gene059018:CDS | 35.0% |
| ! | TTTTCCAGAAGAAGAGGAAT+CGG | + | chr1.2:52001012-52001031 | None:intergenic | 35.0% |
| !! | AAAGCATTTTCCAGAAGAAG+AGG | + | chr1.2:52001018-52001037 | None:intergenic | 35.0% |
| !! | AAGTTTTAGCACCTATGTCA+AGG | - | chr1.2:52000318-52000337 | MS.gene059018:intron | 35.0% |
| !! | AGTTTTAGCACCTATGTCAA+GGG | - | chr1.2:52000319-52000338 | MS.gene059018:intron | 35.0% |
| !! | CTCTCTATTTTTCCTGGATT+TGG | + | chr1.2:52000049-52000068 | None:intergenic | 35.0% |
| !! | TCTGGTTCTTCTTCAAATCT+AGG | + | chr1.2:51997909-51997928 | None:intergenic | 35.0% |
| !!! | CTAGGGTTTTGTTTTTCATG+AGG | + | chr1.2:51997891-51997910 | None:intergenic | 35.0% |
| !!! | GAATCATCATCCTTTTTTCC+TGG | + | chr1.2:51998191-51998210 | None:intergenic | 35.0% |
| AAATACGAGGAACCAAATCC+AGG | - | chr1.2:52000034-52000053 | MS.gene059018:intron | 40.0% | |
| AACTCCATCAGATACCTAAG+AGG | - | chr1.2:52000440-52000459 | MS.gene059018:intron | 40.0% | |
| AAGGATTTATGCTGATGGCA+AGG | - | chr1.2:51998763-51998782 | MS.gene059018:CDS | 40.0% | |
| ACTGAGAAACCATGTTCGAA+AGG | - | chr1.2:51999790-51999809 | MS.gene059018:CDS | 40.0% | |
| ACTGGATCATTTCAATGAGC+TGG | - | chr1.2:52000969-52000988 | MS.gene059018:intron | 40.0% | |
| AGAATGATAGGCTGGAAACT+CGG | + | chr1.2:52000557-52000576 | None:intergenic | 40.0% | |
| AGATGATGAGATGGATCGTT+CGG | + | chr1.2:51997840-51997859 | None:intergenic | 40.0% | |
| AGCATGCTGAAAAACTCTCA+AGG | - | chr1.2:51999363-51999382 | MS.gene059018:CDS | 40.0% | |
| AGGCAACAAATGATCACTGA+AGG | + | chr1.2:52000764-52000783 | None:intergenic | 40.0% | |
| AGTGGTATCCAGTCAAAGAT+TGG | + | chr1.2:51999543-51999562 | None:intergenic | 40.0% | |
| ATGTCCATGCAAAGAGACAA+TGG | - | chr1.2:52001693-52001712 | MS.gene059018:CDS | 40.0% | |
| CAAAAGTTTCAGGGCCAATT+TGG | + | chr1.2:51998713-51998732 | None:intergenic | 40.0% | |
| CATGGACATATGAAGACATG+AGG | + | chr1.2:52001682-52001701 | None:intergenic | 40.0% | |
| CATTATGAGCCCAAGATCAA+CGG | - | chr1.2:52001597-52001616 | MS.gene059018:intron | 40.0% | |
| CCTTCATGTGAAAATCCTTG+GGG | + | chr1.2:51999417-51999436 | None:intergenic | 40.0% | |
| CTGAAAAACTCTCAAGGTTG+TGG | - | chr1.2:51999369-51999388 | MS.gene059018:CDS | 40.0% | |
| CTGAGAAACCATGTTCGAAA+GGG | - | chr1.2:51999791-51999810 | MS.gene059018:CDS | 40.0% | |
| CTGGATCATTTCAATGAGCT+GGG | - | chr1.2:52000970-52000989 | MS.gene059018:intron | 40.0% | |
| CTTCAGTTGTGTGAACTAGA+AGG | - | chr1.2:51999218-51999237 | MS.gene059018:CDS | 40.0% | |
| GAACAGATGAAGCTTCATTC+TGG | + | chr1.2:52001365-52001384 | None:intergenic | 40.0% | |
| GAACATGGTTTCTCAGTATC+AGG | + | chr1.2:51999787-51999806 | None:intergenic | 40.0% | |
| GAATGAAGCTTCATCTGTTC+AGG | - | chr1.2:52001365-52001384 | MS.gene059018:CDS | 40.0% | |
| GATACTCATGAATCGTTCCT+TGG | - | chr1.2:51999051-51999070 | MS.gene059018:CDS | 40.0% | |
| GGAAAAATGTGTGCAACAGT+TGG | - | chr1.2:51999483-51999502 | MS.gene059018:CDS | 40.0% | |
| GTCATCAAATTCAGGCTTCT+TGG | + | chr1.2:51998222-51998241 | None:intergenic | 40.0% | |
| GTCTCCTATGTTTCTCGAAT+CGG | - | chr1.2:52000192-52000211 | MS.gene059018:CDS | 40.0% | |
| GTGAGGATAGATTGGAAAGT+CGG | + | chr1.2:52000827-52000846 | None:intergenic | 40.0% | |
| GTTATGGTTGGGACTAAGAA+GGG | - | chr1.2:51998859-51998878 | MS.gene059018:CDS | 40.0% | |
| GTTGGAGCTATGAATAAGTC+AGG | - | chr1.2:51998949-51998968 | MS.gene059018:CDS | 40.0% | |
| GTTTCCTCTTAGGTATCTGA+TGG | + | chr1.2:52000447-52000466 | None:intergenic | 40.0% | |
| TAACCTAATGCATGCGTTCA+TGG | - | chr1.2:51997988-51998007 | MS.gene059018:CDS | 40.0% | |
| TCAGGAAACCAGTATGAAGA+TGG | - | chr1.2:51999703-51999722 | MS.gene059018:intron | 40.0% | |
| TCGGTAATTTGATCGTGAAC+TGG | + | chr1.2:52001508-52001527 | None:intergenic | 40.0% | |
| TCTCCTATGTTTCTCGAATC+GGG | - | chr1.2:52000193-52000212 | MS.gene059018:CDS | 40.0% | |
| TGAAAATCCTTGGGGTTTGA+TGG | + | chr1.2:51999409-51999428 | None:intergenic | 40.0% | |
| TGGATCATTTCAATGAGCTG+GGG | - | chr1.2:52000971-52000990 | MS.gene059018:intron | 40.0% | |
| TGTTATGGTTGGGACTAAGA+AGG | - | chr1.2:51998858-51998877 | MS.gene059018:CDS | 40.0% | |
| TTCAGGCTTCTTGGATGATA+AGG | + | chr1.2:51998213-51998232 | None:intergenic | 40.0% | |
| TTCGGGTAGCTGTAAATTTC+TGG | + | chr1.2:52001541-52001560 | None:intergenic | 40.0% | |
| TTCTGACGAAGATGATGAGA+TGG | + | chr1.2:51997849-51997868 | None:intergenic | 40.0% | |
| TTCTTCTGCTCCAGGAAAAA+AGG | - | chr1.2:51998178-51998197 | MS.gene059018:CDS | 40.0% | |
| TTGTCTAACCCTTTCGAACA+TGG | + | chr1.2:51999802-51999821 | None:intergenic | 40.0% | |
| ! | ATGAGCTTGGTTCAAGTTCA+AGG | + | chr1.2:52000153-52000172 | None:intergenic | 40.0% |
| ! | CAAATTGGCCCTGAAACTTT+TGG | - | chr1.2:51998711-51998730 | MS.gene059018:CDS | 40.0% |
| ! | CATCATTGGGTTAGAAAAGC+AGG | - | chr1.2:52001411-52001430 | MS.gene059018:CDS | 40.0% |
| ! | TATTGACTGCTACGGTAGTA+CGG | - | chr1.2:51999451-51999470 | MS.gene059018:CDS | 40.0% |
| !! | AAGTTCTGAGAATGATAGGC+TGG | + | chr1.2:52000565-52000584 | None:intergenic | 40.0% |
| !! | ACACAGGATTGTTGTTTAGC+AGG | + | chr1.2:51999295-51999314 | None:intergenic | 40.0% |
| !! | CTGCTTTTCTAACCCAATGA+TGG | + | chr1.2:52001413-52001432 | None:intergenic | 40.0% |
| !! | GTAGCACTCTCTATTTTTCC+TGG | + | chr1.2:52000055-52000074 | None:intergenic | 40.0% |
| !! | TGTGAGACTATAGCCTTGTT+TGG | + | chr1.2:51998653-51998672 | None:intergenic | 40.0% |
| AAACAGGCGACTAAGAAGCA+TGG | + | chr1.2:51999901-51999920 | None:intergenic | 45.0% | |
| AAGATCAACGGTGGAGATCA+GGG | - | chr1.2:52001609-52001628 | MS.gene059018:intron | 45.0% | |
| AAGATCACGCTTGTCAAGGA+AGG | + | chr1.2:52000006-52000025 | None:intergenic | 45.0% | |
| AAGTTTCAGGACCTCTGTCA+AGG | - | chr1.2:52000636-52000655 | MS.gene059018:CDS | 45.0% | |
| ACAGAAGATCACGCTTGTCA+AGG | + | chr1.2:52000010-52000029 | None:intergenic | 45.0% | |
| ACATGTCTGCATACACCAAG+AGG | + | chr1.2:51999332-51999351 | None:intergenic | 45.0% | |
| ACCTTCCACCATACCATCAT+TGG | - | chr1.2:52001397-52001416 | MS.gene059018:CDS | 45.0% | |
| ACTGAAGCTGAAAGCGAACT+TGG | - | chr1.2:52000868-52000887 | MS.gene059018:intron | 45.0% | |
| AGCACTGTCTGATACCTAAG+AGG | - | chr1.2:52000122-52000141 | MS.gene059018:intron | 45.0% | |
| AGTTATGTCACCCTTGACAG+AGG | + | chr1.2:52000650-52000669 | None:intergenic | 45.0% | |
| AGTTCCACTCAGTTTGCACT+TGG | + | chr1.2:52000296-52000315 | None:intergenic | 45.0% | |
| AGTTCCACTCAGTTTGCAGT+TGG | + | chr1.2:52000614-52000633 | None:intergenic | 45.0% | |
| AGTTTCAGGACCTCTGTCAA+GGG | - | chr1.2:52000637-52000656 | MS.gene059018:CDS | 45.0% | |
| ATTGACTGCTACGGTAGTAC+GGG | - | chr1.2:51999452-51999471 | MS.gene059018:CDS | 45.0% | |
| CAGTTGTGTGAACTAGAAGG+TGG | - | chr1.2:51999221-51999240 | MS.gene059018:CDS | 45.0% | |
| CATTAGGCGACTTCCACTTT+AGG | - | chr1.2:52001151-52001170 | MS.gene059018:intron | 45.0% | |
| CCTTCCACCATACCATCATT+GGG | - | chr1.2:52001398-52001417 | MS.gene059018:CDS | 45.0% | |
| CGAGACATGTGAGGATAGAT+TGG | + | chr1.2:52000835-52000854 | None:intergenic | 45.0% | |
| CGCTGTCATCCAGAGAAAAT+GGG | + | chr1.2:52001722-52001741 | None:intergenic | 45.0% | |
| CTAACCCAATGATGGTATGG+TGG | + | chr1.2:52001405-52001424 | None:intergenic | 45.0% | |
| CTACCATCATCGTCGTGATA+CGG | - | chr1.2:52001443-52001462 | MS.gene059018:CDS | 45.0% | |
| CTTCAGTGCCAATCTTTGAC+TGG | - | chr1.2:51999532-51999551 | MS.gene059018:CDS | 45.0% | |
| GATAATGCAGGCGCCATATA+TGG | + | chr1.2:52001093-52001112 | None:intergenic | 45.0% | |
| GATGATGAGATGGATCGTTC+GGG | + | chr1.2:51997839-51997858 | None:intergenic | 45.0% | |
| GGAATGCGAGAAGAATGATC+TGG | + | chr1.2:51997927-51997946 | None:intergenic | 45.0% | |
| GGGTGAGAAAATTACTCCAC+AGG | - | chr1.2:52000213-52000232 | MS.gene059018:CDS | 45.0% | |
| GGTGACAGTGACATTACTTC+TGG | - | chr1.2:52000340-52000359 | MS.gene059018:intron | 45.0% | |
| GTCAAGGGTGACATAACTCA+TGG | - | chr1.2:52000652-52000671 | MS.gene059018:CDS | 45.0% | |
| GTTCCACTCAGTTTGCACTT+GGG | + | chr1.2:52000295-52000314 | None:intergenic | 45.0% | |
| GTTCCACTCAGTTTGCAGTT+GGG | + | chr1.2:52000613-52000632 | None:intergenic | 45.0% | |
| GTTCGCTTTCAGCTTCAGTT+CGG | + | chr1.2:52000867-52000886 | None:intergenic | 45.0% | |
| TACGGTAGTACGGGGTTATA+GGG | - | chr1.2:51999461-51999480 | MS.gene059018:CDS | 45.0% | |
| TAGATTGGAAAGTCGGTGTG+AGG | + | chr1.2:52000820-52000839 | None:intergenic | 45.0% | |
| TAGCTCCAACAGAAGGTGAA+CGG | + | chr1.2:51998939-51998958 | None:intergenic | 45.0% | |
| TATGTTGGAAACTCAGCCTG+TGG | + | chr1.2:52000232-52000251 | None:intergenic | 45.0% | |
| TCAACTGATCGGAGGAACAT+AGG | + | chr1.2:52000787-52000806 | None:intergenic | 45.0% | |
| TCATCAGCTAACCCCCTTAA+AGG | - | chr1.2:51998744-51998763 | MS.gene059018:CDS | 45.0% | |
| TCATTCCGTTCACCTTCTGT+TGG | - | chr1.2:51998931-51998950 | MS.gene059018:CDS | 45.0% | |
| TCGCTGTCATCCAGAGAAAA+TGG | + | chr1.2:52001723-52001742 | None:intergenic | 45.0% | |
| TGACAGCAACAAACACACCA+AGG | + | chr1.2:51999071-51999090 | None:intergenic | 45.0% | |
| TGAGTGGAACTCCAAGTTTC+AGG | - | chr1.2:52000623-52000642 | MS.gene059018:CDS | 45.0% | |
| TGATCACTGAAGGATGAGCT+TGG | + | chr1.2:52000754-52000773 | None:intergenic | 45.0% | |
| TGATCTCCACCGTTGATCTT+GGG | + | chr1.2:52001609-52001628 | None:intergenic | 45.0% | |
| TTGACAGAGGTCCTGAAACT+TGG | + | chr1.2:52000637-52000656 | None:intergenic | 45.0% | |
| TTGATATCGGGTCTTCACCA+TGG | + | chr1.2:52001125-52001144 | None:intergenic | 45.0% | |
| TTGCCATGAACGCATGCATT+AGG | + | chr1.2:51997994-51998013 | None:intergenic | 45.0% | |
| ! | AGAACCGATTCCTCTTCTTC+TGG | - | chr1.2:52001005-52001024 | MS.gene059018:intron | 45.0% |
| ! | CCCCAAGGATTTTCACATGA+AGG | - | chr1.2:51999414-51999433 | MS.gene059018:CDS | 45.0% |
| ! | CTCAGATTTTCTTCTGCTCC+AGG | - | chr1.2:51998170-51998189 | MS.gene059018:CDS | 45.0% |
| ! | TCACCCGATTCGAGAAACAT+AGG | + | chr1.2:52000199-52000218 | None:intergenic | 45.0% |
| ! | TCTCCCGATTCGAGAAACAT+AGG | + | chr1.2:52000517-52000536 | None:intergenic | 45.0% |
| !! | ATGGATCGTTCGGGTTAGTT+CGG | + | chr1.2:51997830-51997849 | None:intergenic | 45.0% |
| !! | GGTGCTGTTATACTGTACTG+AGG | + | chr1.2:52000274-52000293 | None:intergenic | 45.0% |
| AACACAGGTCGAGACATGTG+AGG | + | chr1.2:52000844-52000863 | None:intergenic | 50.0% | |
| ACGGTAGTACGGGGTTATAG+GGG | - | chr1.2:51999462-51999481 | MS.gene059018:CDS | 50.0% | |
| ACTGATCGGAGGAACATAGG+AGG | + | chr1.2:52000784-52000803 | None:intergenic | 50.0% | |
| AGATCAACGGTGGAGATCAG+GGG | - | chr1.2:52001610-52001629 | MS.gene059018:intron | 50.0% | |
| ATAAGGGTGAGGGCCTAAAG+TGG | + | chr1.2:52001167-52001186 | None:intergenic | 50.0% | |
| ATGGTTGGGACTAAGAAGGG+CGG | - | chr1.2:51998862-51998881 | MS.gene059018:CDS | 50.0% | |
| CAAGATCAACGGTGGAGATC+AGG | - | chr1.2:52001608-52001627 | MS.gene059018:intron | 50.0% | |
| CTACGGTAGTACGGGGTTAT+AGG | - | chr1.2:51999460-51999479 | MS.gene059018:CDS | 50.0% | |
| CTGATCTCCACCGTTGATCT+TGG | + | chr1.2:52001610-52001629 | None:intergenic | 50.0% | |
| CTGGTTAAGGATAAGCACCC+AGG | + | chr1.2:52001489-52001508 | None:intergenic | 50.0% | |
| CTTCCGTATCACGACGATGA+TGG | + | chr1.2:52001449-52001468 | None:intergenic | 50.0% | |
| GCGTCCATTGTCTCTTTGCA+TGG | + | chr1.2:52001700-52001719 | None:intergenic | 50.0% | |
| GTCACTGTCACCCTTGACAT+AGG | + | chr1.2:52000332-52000351 | None:intergenic | 50.0% | |
| GTGAGAAGGACAATGCTGTG+TGG | + | chr1.2:52001308-52001327 | None:intergenic | 50.0% | |
| TATGAGCCCAAGATCAACGG+TGG | - | chr1.2:52001600-52001619 | MS.gene059018:intron | 50.0% | |
| TCAGCTTCAGTTCGGAACAC+AGG | + | chr1.2:52000859-52000878 | None:intergenic | 50.0% | |
| TCTCAAGGTTGTGGACCTTG+TGG | - | chr1.2:51999378-51999397 | MS.gene059018:CDS | 50.0% | |
| TTGACTGCTACGGTAGTACG+GGG | - | chr1.2:51999453-51999472 | MS.gene059018:CDS | 50.0% | |
| ! | ACGACGATGATGGTAGTCAC+AGG | + | chr1.2:52001439-52001458 | None:intergenic | 50.0% |
| ! | CAATGGACGCCCATTTTCTC+TGG | - | chr1.2:52001710-52001729 | MS.gene059018:CDS | 50.0% |
| ! | CCCAATGATGGTATGGTGGA+AGG | + | chr1.2:52001401-52001420 | None:intergenic | 50.0% |
| ! | CCTGGCTTTCATCTTCACCT+GGG | - | chr1.2:52001469-52001488 | MS.gene059018:intron | 50.0% |
| !! | GGTTTGATGGTGTCACCACA+AGG | + | chr1.2:51999396-51999415 | None:intergenic | 50.0% |
| !! | TGGATCGTTCGGGTTAGTTC+GGG | + | chr1.2:51997829-51997848 | None:intergenic | 50.0% |
| AGAAGGGCGGCAACTCTTCA+AGG | - | chr1.2:51998875-51998894 | MS.gene059018:CDS | 55.0% | |
| AGTCAGCGCTCATCGGAAAC+AGG | + | chr1.2:51999917-51999936 | None:intergenic | 55.0% | |
| ATCGTCGTGATACGGAAGCC+TGG | - | chr1.2:52001451-52001470 | MS.gene059018:CDS | 55.0% | |
| CCCAGGTGAAGATGAAAGCC+AGG | + | chr1.2:52001472-52001491 | None:intergenic | 55.0% | |
| GATCAACGGTGGAGATCAGG+GGG | - | chr1.2:52001611-52001630 | MS.gene059018:intron | 55.0% | |
| GCACCCAACTGCAAACTGAG+TGG | - | chr1.2:52000607-52000626 | MS.gene059018:intron | 55.0% | |
| GCACCCAAGTGCAAACTGAG+TGG | - | chr1.2:52000289-52000308 | MS.gene059018:intron | 55.0% | |
| GGTGACACCATCAAACCCCA+AGG | - | chr1.2:51999399-51999418 | MS.gene059018:CDS | 55.0% | |
| TAGGCTGGAAACTCGGCATG+TGG | + | chr1.2:52000550-52000569 | None:intergenic | 55.0% | |
| TCTGTGCAGTCAGCGCTCAT+CGG | + | chr1.2:51999924-51999943 | None:intergenic | 55.0% | |
| ! | GCCTGGCTTTCATCTTCACC+TGG | - | chr1.2:52001468-52001487 | MS.gene059018:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 51997807 | 52001785 | 51997807 | ID=MS.gene059018 |
| chr1.2 | mRNA | 51997807 | 52001785 | 51997807 | ID=MS.gene059018.t1;Parent=MS.gene059018 |
| chr1.2 | exon | 52001620 | 52001785 | 52001620 | ID=MS.gene059018.t1.exon1;Parent=MS.gene059018.t1 |
| chr1.2 | CDS | 52001620 | 52001785 | 52001620 | ID=cds.MS.gene059018.t1;Parent=MS.gene059018.t1 |
| chr1.2 | exon | 52001341 | 52001478 | 52001341 | ID=MS.gene059018.t1.exon2;Parent=MS.gene059018.t1 |
| chr1.2 | CDS | 52001341 | 52001478 | 52001341 | ID=cds.MS.gene059018.t1;Parent=MS.gene059018.t1 |
| chr1.2 | exon | 52000622 | 52000747 | 52000622 | ID=MS.gene059018.t1.exon3;Parent=MS.gene059018.t1 |
| chr1.2 | CDS | 52000622 | 52000747 | 52000622 | ID=cds.MS.gene059018.t1;Parent=MS.gene059018.t1 |
| chr1.2 | exon | 52000157 | 52000246 | 52000157 | ID=MS.gene059018.t1.exon4;Parent=MS.gene059018.t1 |
| chr1.2 | CDS | 52000157 | 52000246 | 52000157 | ID=cds.MS.gene059018.t1;Parent=MS.gene059018.t1 |
| chr1.2 | exon | 51999780 | 51999885 | 51999780 | ID=MS.gene059018.t1.exon5;Parent=MS.gene059018.t1 |
| chr1.2 | CDS | 51999780 | 51999885 | 51999780 | ID=cds.MS.gene059018.t1;Parent=MS.gene059018.t1 |
| chr1.2 | exon | 51999642 | 51999708 | 51999642 | ID=MS.gene059018.t1.exon6;Parent=MS.gene059018.t1 |
| chr1.2 | CDS | 51999642 | 51999708 | 51999642 | ID=cds.MS.gene059018.t1;Parent=MS.gene059018.t1 |
| chr1.2 | exon | 51997807 | 51999558 | 51997807 | ID=MS.gene059018.t1.exon7;Parent=MS.gene059018.t1 |
| chr1.2 | CDS | 51997807 | 51999558 | 51997807 | ID=cds.MS.gene059018.t1;Parent=MS.gene059018.t1 |
| Gene Sequence |
| Protein sequence |
