Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95390.t1 | PNX79674.1 | 70.9 | 398 | 73 | 2 | 8 | 362 | 19 | 416 | 5.90E-148 | 534.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95390.t1 | A0A2K3LMC2 | 70.9 | 398 | 73 | 2 | 8 | 362 | 19 | 416 | 4.3e-148 | 534.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051719 | MS.gene95390 | 0.809684 | 1.68E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene95390 | 0.804734 | 1.87E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene95390 | 0.815964 | 7.06E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95390.t1 | MTR_3g058570 | 69.945 | 366 | 78 | 2 | 40 | 374 | 23 | 387 | 8.08e-176 | 499 |
| MS.gene95390.t1 | MTR_3g051060 | 44.626 | 428 | 166 | 8 | 1 | 362 | 304 | 726 | 1.24e-111 | 346 |
| MS.gene95390.t1 | MTR_5g085350 | 46.043 | 417 | 165 | 7 | 14 | 374 | 314 | 726 | 2.66e-104 | 327 |
| MS.gene95390.t1 | MTR_5g085350 | 44.651 | 430 | 165 | 7 | 14 | 374 | 314 | 739 | 2.64e-102 | 322 |
| MS.gene95390.t1 | MTR_5g085340 | 53.774 | 318 | 138 | 4 | 59 | 374 | 437 | 747 | 3.64e-100 | 317 |
| MS.gene95390.t1 | MTR_5g085360 | 42.188 | 320 | 151 | 3 | 74 | 361 | 409 | 726 | 1.15e-78 | 260 |
| MS.gene95390.t1 | MTR_3g050500 | 45.130 | 308 | 153 | 5 | 59 | 360 | 422 | 719 | 3.10e-75 | 251 |
| MS.gene95390.t1 | MTR_2g020510 | 41.503 | 306 | 171 | 3 | 74 | 378 | 394 | 692 | 5.40e-75 | 249 |
| MS.gene95390.t1 | MTR_2g020450 | 41.503 | 306 | 170 | 4 | 74 | 378 | 397 | 694 | 8.94e-67 | 227 |
| MS.gene95390.t1 | MTR_2g020470 | 37.255 | 306 | 164 | 4 | 74 | 378 | 396 | 674 | 1.69e-63 | 218 |
| MS.gene95390.t1 | MTR_2g438400 | 32.082 | 293 | 188 | 6 | 72 | 361 | 257 | 541 | 4.00e-42 | 157 |
| MS.gene95390.t1 | MTR_3g055310 | 30.435 | 299 | 196 | 5 | 72 | 365 | 59 | 350 | 1.68e-41 | 151 |
| MS.gene95390.t1 | MTR_3g055310 | 30.435 | 299 | 196 | 5 | 72 | 365 | 122 | 413 | 4.11e-41 | 152 |
| MS.gene95390.t1 | MTR_3g055310 | 30.435 | 299 | 196 | 5 | 72 | 365 | 174 | 465 | 7.04e-41 | 152 |
| MS.gene95390.t1 | MTR_3g055310 | 30.435 | 299 | 196 | 5 | 72 | 365 | 202 | 493 | 9.56e-41 | 152 |
| MS.gene95390.t1 | MTR_3g055310 | 30.435 | 299 | 196 | 5 | 72 | 365 | 200 | 491 | 1.05e-40 | 152 |
| MS.gene95390.t1 | MTR_3g055310 | 30.435 | 299 | 196 | 5 | 72 | 365 | 227 | 518 | 1.42e-40 | 152 |
| MS.gene95390.t1 | MTR_2g017930 | 34.815 | 270 | 165 | 4 | 90 | 358 | 379 | 638 | 4.12e-40 | 153 |
| MS.gene95390.t1 | MTR_2g438440 | 32.765 | 293 | 186 | 6 | 72 | 361 | 398 | 682 | 2.25e-39 | 151 |
| MS.gene95390.t1 | MTR_5g091220 | 31.250 | 288 | 188 | 5 | 76 | 361 | 319 | 598 | 1.50e-38 | 148 |
| MS.gene95390.t1 | MTR_2g438740 | 30.034 | 293 | 191 | 3 | 74 | 361 | 280 | 563 | 3.33e-38 | 147 |
| MS.gene95390.t1 | MTR_2g438720 | 29.352 | 293 | 197 | 5 | 72 | 361 | 403 | 688 | 1.24e-36 | 143 |
| MS.gene95390.t1 | MTR_2g438700 | 29.352 | 293 | 197 | 5 | 72 | 361 | 401 | 686 | 1.52e-36 | 143 |
| MS.gene95390.t1 | MTR_5g028190 | 28.758 | 306 | 209 | 5 | 67 | 368 | 235 | 535 | 1.38e-34 | 136 |
| MS.gene95390.t1 | MTR_2g438640 | 29.010 | 293 | 197 | 5 | 72 | 361 | 403 | 687 | 1.16e-33 | 135 |
| MS.gene95390.t1 | MTR_3g455790 | 28.671 | 286 | 194 | 4 | 72 | 355 | 310 | 587 | 1.58e-32 | 130 |
| MS.gene95390.t1 | MTR_2g438760 | 29.352 | 293 | 190 | 6 | 77 | 362 | 277 | 559 | 2.00e-31 | 127 |
| MS.gene95390.t1 | MTR_5g028130 | 25.939 | 293 | 208 | 4 | 74 | 362 | 46 | 333 | 4.74e-30 | 120 |
| MS.gene95390.t1 | MTR_2g438640 | 28.328 | 293 | 173 | 5 | 72 | 361 | 403 | 661 | 1.10e-29 | 123 |
| MS.gene95390.t1 | MTR_5g028450 | 30.097 | 309 | 191 | 7 | 74 | 367 | 5 | 303 | 5.76e-29 | 116 |
| MS.gene95390.t1 | MTR_3g452020 | 26.962 | 293 | 201 | 5 | 72 | 362 | 135 | 416 | 3.70e-27 | 113 |
| MS.gene95390.t1 | MTR_3g452020 | 26.962 | 293 | 201 | 5 | 72 | 362 | 311 | 592 | 4.84e-27 | 114 |
| MS.gene95390.t1 | MTR_6g017215 | 26.984 | 189 | 137 | 1 | 171 | 359 | 2 | 189 | 1.72e-23 | 99.4 |
| MS.gene95390.t1 | MTR_5g028930 | 26.054 | 261 | 183 | 4 | 74 | 331 | 325 | 578 | 1.50e-22 | 101 |
| MS.gene95390.t1 | MTR_2g438640 | 30.435 | 184 | 126 | 2 | 178 | 361 | 403 | 584 | 1.31e-21 | 98.6 |
| MS.gene95390.t1 | MTR_5g028690 | 29.487 | 156 | 106 | 2 | 169 | 322 | 35 | 188 | 2.18e-16 | 79.0 |
| MS.gene95390.t1 | MTR_2g438470 | 38.889 | 126 | 68 | 5 | 131 | 251 | 376 | 497 | 5.10e-16 | 80.9 |
| MS.gene95390.t1 | MTR_5g028110 | 30.464 | 151 | 102 | 3 | 219 | 368 | 28 | 176 | 9.85e-15 | 72.8 |
| MS.gene95390.t1 | MTR_1g113760 | 24.752 | 303 | 204 | 7 | 72 | 357 | 242 | 537 | 7.02e-14 | 74.3 |
| MS.gene95390.t1 | MTR_2g438580 | 39.726 | 73 | 43 | 1 | 196 | 268 | 9 | 80 | 1.45e-11 | 60.8 |
| MS.gene95390.t1 | MTR_5g028840 | 26.712 | 146 | 107 | 0 | 177 | 322 | 4 | 149 | 2.32e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95390.t1 | AT5G35810 | 33.660 | 306 | 187 | 7 | 72 | 368 | 37 | 335 | 1.63e-46 | 165 |
| MS.gene95390.t1 | AT3G18670 | 31.724 | 290 | 188 | 5 | 76 | 362 | 299 | 581 | 4.76e-38 | 147 |
| MS.gene95390.t1 | AT3G18670 | 31.724 | 290 | 188 | 5 | 76 | 362 | 354 | 636 | 5.43e-38 | 147 |
| MS.gene95390.t1 | AT5G04730 | 32.618 | 233 | 148 | 3 | 134 | 361 | 357 | 585 | 2.92e-34 | 136 |
| MS.gene95390.t1 | AT5G04700 | 31.835 | 267 | 163 | 4 | 103 | 361 | 397 | 652 | 1.04e-32 | 132 |
| MS.gene95390.t1 | AT3G54065 | 32.212 | 208 | 135 | 1 | 161 | 362 | 8 | 215 | 6.71e-32 | 122 |
| MS.gene95390.t1 | AT5G04690 | 31.008 | 258 | 167 | 5 | 107 | 361 | 379 | 628 | 7.04e-31 | 126 |
| MS.gene95390.t1 | AT5G04690 | 31.008 | 258 | 167 | 5 | 107 | 361 | 393 | 642 | 8.62e-31 | 126 |
| MS.gene95390.t1 | AT5G04690 | 30.182 | 275 | 181 | 5 | 107 | 378 | 359 | 625 | 9.31e-31 | 125 |
| MS.gene95390.t1 | AT5G04680 | 30.258 | 271 | 170 | 5 | 103 | 361 | 384 | 647 | 3.31e-25 | 109 |
| MS.gene95390.t1 | AT5G04680 | 30.258 | 271 | 170 | 5 | 103 | 361 | 370 | 633 | 3.46e-25 | 109 |
| MS.gene95390.t1 | AT5G04680 | 30.258 | 271 | 170 | 5 | 103 | 361 | 413 | 676 | 3.82e-25 | 109 |
| MS.gene95390.t1 | AT5G04680 | 30.258 | 271 | 170 | 5 | 103 | 361 | 261 | 524 | 4.53e-25 | 108 |
Find 100 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGTATCCTTGGCCTTTC+AGG | 0.133358 | 3.3:+47731293 | MS.gene95390:CDS |
| TTCCATGTTAACTTCGTATA+TGG | 0.199761 | 3.3:-47732382 | None:intergenic |
| AATCCCAAAAGTAGTTTCTT+TGG | 0.225787 | 3.3:-47733377 | None:intergenic |
| ATGAATCAAATACCTTGATT+TGG | 0.243403 | 3.3:-47731732 | None:intergenic |
| TTTGCCAAAGAAACTACTTT+TGG | 0.291810 | 3.3:+47733373 | MS.gene95390:CDS |
| GCTGGATTCATCTTCCTATC+AGG | 0.300186 | 3.3:-47734583 | None:intergenic |
| CTTTACATTGATCTTCTTAG+AGG | 0.300527 | 3.3:+47733551 | MS.gene95390:CDS |
| CCAATGTCGTTGAGGCATTA+AGG | 0.302274 | 3.3:+47732445 | MS.gene95390:CDS |
| AAAACTATGCCACATGTCTT+TGG | 0.311259 | 3.3:+47731252 | MS.gene95390:CDS |
| TGAATCAAATACCTTGATTT+GGG | 0.317459 | 3.3:-47731731 | None:intergenic |
| TTTGCTTTGTCATCCGTAAT+TGG | 0.320194 | 3.3:+47733269 | MS.gene95390:CDS |
| GTAACAATCTCGGTCACTTT+TGG | 0.336310 | 3.3:-47732562 | None:intergenic |
| ACTCATATCTCCTATTGGTT+TGG | 0.338319 | 3.3:-47731682 | None:intergenic |
| GTTCCACTCATATCTCCTAT+TGG | 0.351929 | 3.3:-47731687 | None:intergenic |
| TCTCTTCCTTATCCACTCCT+TGG | 0.366537 | 3.3:-47732515 | None:intergenic |
| GCGCGAGCTGTGCCGAATAC+TGG | 0.382676 | 3.3:-47734482 | None:intergenic |
| ATGTTCACTGGTTTCTGCTC+TGG | 0.383560 | 3.3:+47733428 | MS.gene95390:CDS |
| GACCGAGATTGTTACATATC+TGG | 0.387046 | 3.3:+47732570 | MS.gene95390:CDS |
| GTTGTTCTGAGCGGTGGTTT+TGG | 0.388702 | 3.3:-47734647 | None:intergenic |
| CACCGCCGCTGACCCATTCT+CGG | 0.399000 | 3.3:+47734191 | MS.gene95390:CDS |
| TAATCCTTATGAAACGTACT+TGG | 0.399496 | 3.3:+47731650 | MS.gene95390:CDS |
| CGCATCATCAAGCACTGTGC+CGG | 0.401383 | 3.3:+47733187 | MS.gene95390:CDS |
| AAAAGCTCCTTCTTCTTCTC+AGG | 0.403556 | 3.3:+47734143 | MS.gene95390:CDS |
| TGCTTGTAGCAGTTGAGAAC+AGG | 0.405848 | 3.3:+47732418 | MS.gene95390:CDS |
| ATCCTTGGCCTTTCAGGAGT+TGG | 0.410960 | 3.3:+47731299 | MS.gene95390:CDS |
| TCCATTGTTGCCATGTTCAC+TGG | 0.413454 | 3.3:+47733416 | MS.gene95390:CDS |
| GGTGGCAACGACGGTGAAAC+AGG | 0.416539 | 3.3:+47733209 | MS.gene95390:CDS |
| GTAGTAGCAGCACAACTTGT+TGG | 0.420014 | 3.3:+47733155 | MS.gene95390:CDS |
| TTGGTCTGGATCTTGCTCTC+TGG | 0.421202 | 3.3:-47734628 | None:intergenic |
| CGAGAATGGGTCAGCGGCGG+TGG | 0.425910 | 3.3:-47734190 | None:intergenic |
| GTTCCCAAGTACGTTTCATA+AGG | 0.427781 | 3.3:-47731654 | None:intergenic |
| AGAGAAACAAAGACCAATTA+CGG | 0.448501 | 3.3:-47733282 | None:intergenic |
| CCAGGCTTTCCTTTCAATGT+TGG | 0.448722 | 3.3:-47733236 | None:intergenic |
| ATCTCCTATTGGTTTGGTGC+CGG | 0.451473 | 3.3:-47731676 | None:intergenic |
| TATGAAACGTACTTGGGAAC+CGG | 0.456747 | 3.3:+47731657 | MS.gene95390:CDS |
| TGATATGCCACATCATTTCA+AGG | 0.462301 | 3.3:-47732599 | None:intergenic |
| TCTAATCCAAGGAGTGGATA+AGG | 0.463372 | 3.3:+47732509 | MS.gene95390:CDS |
| AGGTGGACATCACCAGTATT+CGG | 0.468514 | 3.3:+47734470 | MS.gene95390:CDS |
| TTTGCATACATCTGTATCCT+TGG | 0.471401 | 3.3:+47731284 | MS.gene95390:CDS |
| AAATGGCATAGTTGAAATAG+TGG | 0.476650 | 3.3:+47732332 | MS.gene95390:CDS |
| CTAAGAAGATCAATGTAAAG+TGG | 0.485547 | 3.3:-47733548 | None:intergenic |
| GACAGAACGACGCCGAGAAT+GGG | 0.485969 | 3.3:-47734203 | None:intergenic |
| GCTGCCCGCAGCGGCAGTGA+CGG | 0.486071 | 3.3:-47734519 | None:intergenic |
| TCACTTGCTTCCCTGTGACT+TGG | 0.487287 | 3.3:+47733507 | MS.gene95390:CDS |
| GGACAGAACGACGCCGAGAA+TGG | 0.488022 | 3.3:-47734204 | None:intergenic |
| GGAACCGGCACCAAACCAAT+AGG | 0.489046 | 3.3:+47731672 | MS.gene95390:CDS |
| GGTTCCGTCACTGCCGCTGC+GGG | 0.489263 | 3.3:+47734515 | MS.gene95390:CDS |
| GGAGCAGTACATTAAAGAAC+TGG | 0.490640 | 3.3:+47733004 | MS.gene95390:intron |
| AAAGCAAATGCTTCAAATCC+AGG | 0.494221 | 3.3:-47733254 | None:intergenic |
| TTCGAGAAGTGACTATAGAA+AGG | 0.505745 | 3.3:-47733325 | None:intergenic |
| ACAGCTCGCGCCATCGTGAC+CGG | 0.509930 | 3.3:+47734494 | MS.gene95390:CDS |
| CCAACATTGAAAGGAAAGCC+TGG | 0.513866 | 3.3:+47733236 | MS.gene95390:CDS |
| CACGAACTTCAGAACCTGAT+AGG | 0.519287 | 3.3:+47734569 | MS.gene95390:CDS |
| GATTCTCGCGCTGCCCGCAG+CGG | 0.519629 | 3.3:-47734528 | None:intergenic |
| CCTTAATGCCTCAACGACAT+TGG | 0.524122 | 3.3:-47732445 | None:intergenic |
| TTAACTTCGTATATGGAACT+TGG | 0.525499 | 3.3:-47732375 | None:intergenic |
| CGCAGCGGCAGTGACGGAAC+CGG | 0.526695 | 3.3:-47734513 | None:intergenic |
| AAATGATGTGGCATATCAAA+TGG | 0.530290 | 3.3:+47732604 | MS.gene95390:CDS |
| TCTGCTTACAACCCAAATCA+AGG | 0.531106 | 3.3:+47731720 | MS.gene95390:CDS |
| ACCAGTGAACATGGCAACAA+TGG | 0.532260 | 3.3:-47733417 | None:intergenic |
| GGAAGAAGCTTGCGTTCAGA+TGG | 0.532689 | 3.3:-47731227 | None:intergenic |
| TTTCTAACTGTGAAATGCGC+TGG | 0.538087 | 3.3:-47733029 | None:intergenic |
| ACAGGTGAACCAACATTGAA+AGG | 0.538162 | 3.3:+47733227 | MS.gene95390:CDS |
| GCATCATCAAGCACTGTGCC+GGG | 0.538954 | 3.3:+47733188 | MS.gene95390:CDS |
| TGATGCTAGTGCGTGGCTCA+AGG | 0.544483 | 3.3:+47733112 | MS.gene95390:CDS |
| TTTCCGATCAGTGCACTTGG+TGG | 0.561145 | 3.3:-47734225 | None:intergenic |
| GTTCGTGCTTCATGATGCCT+TGG | 0.561434 | 3.3:-47734553 | None:intergenic |
| GATATGCCACATCATTTCAA+GGG | 0.564986 | 3.3:-47732598 | None:intergenic |
| CACCAGATATGTAACAATCT+CGG | 0.565594 | 3.3:-47732572 | None:intergenic |
| CGGTTCCGTCACTGCCGCTG+CGG | 0.567962 | 3.3:+47734514 | MS.gene95390:CDS |
| GTTTCACCGTCGTTGCCACC+CGG | 0.570188 | 3.3:-47733206 | None:intergenic |
| GCTACTGCATACCAAGTCAC+AGG | 0.572239 | 3.3:-47733518 | None:intergenic |
| AGCAAGTGACTATATAAATG+AGG | 0.575846 | 3.3:-47733493 | None:intergenic |
| CACAGTGCTTGATGATGCGA+AGG | 0.578147 | 3.3:-47733183 | None:intergenic |
| GTGCTGCCCTTGAAATGATG+TGG | 0.580242 | 3.3:+47732592 | MS.gene95390:CDS |
| TTCCATATACGAAGTTAACA+TGG | 0.586336 | 3.3:+47732380 | MS.gene95390:CDS |
| GACACTTACCAACTCCTGAA+AGG | 0.593684 | 3.3:-47731307 | None:intergenic |
| AGAGCAGAAACCAGTGAACA+TGG | 0.594503 | 3.3:-47733426 | None:intergenic |
| ATATTTGATACTCTAATCCA+AGG | 0.600743 | 3.3:+47732498 | MS.gene95390:CDS |
| GTGGCATATCAAATGGTTTG+AGG | 0.600907 | 3.3:+47732611 | MS.gene95390:CDS |
| AATCCTTATGAAACGTACTT+GGG | 0.601141 | 3.3:+47731651 | MS.gene95390:CDS |
| TACCAACTCCTGAAAGGCCA+AGG | 0.605042 | 3.3:-47731301 | None:intergenic |
| TCAAACGTTGTTCTGAGCGG+TGG | 0.610000 | 3.3:-47734653 | None:intergenic |
| CGCCGAGAATGGGTCAGCGG+CGG | 0.610061 | 3.3:-47734193 | None:intergenic |
| AAGGACGCCTGAGAAGAAGA+AGG | 0.610907 | 3.3:-47734150 | None:intergenic |
| TGTCCACCAAGTGCACTGAT+CGG | 0.616717 | 3.3:+47734222 | MS.gene95390:CDS |
| TGATACTCTAATCCAAGGAG+TGG | 0.622082 | 3.3:+47732503 | MS.gene95390:CDS |
| CATTCAAACGTTGTTCTGAG+CGG | 0.627339 | 3.3:-47734656 | None:intergenic |
| ACTGTGCCGGGTGGCAACGA+CGG | 0.629053 | 3.3:+47733200 | MS.gene95390:CDS |
| GGCAGCGCGAGAATCTTCCA+AGG | 0.631120 | 3.3:+47734536 | MS.gene95390:CDS |
| CAGGAGAACCAATGTCGTTG+AGG | 0.637648 | 3.3:+47732437 | MS.gene95390:CDS |
| CGACGCCGAGAATGGGTCAG+CGG | 0.652577 | 3.3:-47734196 | None:intergenic |
| CTACTGCATACCAAGTCACA+GGG | 0.653286 | 3.3:-47733517 | None:intergenic |
| TCATCAAGCACTGTGCCGGG+TGG | 0.678616 | 3.3:+47733191 | MS.gene95390:CDS |
| AGCGTGGTGGAAGTTGATTG+AGG | 0.681535 | 3.3:+47734450 | MS.gene95390:intron |
| AGTGACGGAACCGGTCACGA+TGG | 0.688023 | 3.3:-47734504 | None:intergenic |
| AAACCAATAGGAGATATGAG+TGG | 0.704499 | 3.3:+47731684 | MS.gene95390:CDS |
| GTGGTGGAAGTTGATTGAGG+TGG | 0.717172 | 3.3:+47734453 | MS.gene95390:CDS |
| TGATAAATGATGCTAGTGCG+TGG | 0.730360 | 3.3:+47733105 | MS.gene95390:CDS |
| AAATGGAAGAGAAACACACA+TGG | 0.733060 | 3.3:+47731201 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGTTATGAAAATACAA+GGG | - | chr3.3:47733900-47733919 | None:intergenic | 15.0% |
| !! | TAATGTTTGTAATAATACAT+TGG | + | chr3.3:47733710-47733729 | MS.gene95390:intron | 15.0% |
| !!! | ATTGATCCTTTATTTTTTTT+TGG | + | chr3.3:47733776-47733795 | MS.gene95390:intron | 15.0% |
| !!! | TTTTATTTTAAATCAAGGAA+GGG | + | chr3.3:47731917-47731936 | MS.gene95390:intron | 15.0% |
| !!! | TTTTTATTTTAAATCAAGGA+AGG | + | chr3.3:47731916-47731935 | MS.gene95390:intron | 15.0% |
| !! | AAGCCATAAATAAACTAAAT+GGG | - | chr3.3:47733803-47733822 | None:intergenic | 20.0% |
| !! | CAAAAAGTTATGAAAATACA+AGG | - | chr3.3:47733901-47733920 | None:intergenic | 20.0% |
| !! | GTCTTAAATATAAGTGAAAT+TGG | - | chr3.3:47731796-47731815 | None:intergenic | 20.0% |
| !! | TAAGCCATAAATAAACTAAA+TGG | - | chr3.3:47733804-47733823 | None:intergenic | 20.0% |
| !!! | AGATCAAACATTCTAAAATA+AGG | + | chr3.3:47732719-47732738 | MS.gene95390:intron | 20.0% |
| !!! | ATAATTTTCGTTTTTGGATT+TGG | - | chr3.3:47734055-47734074 | None:intergenic | 20.0% |
| !!! | ATTTCACTTATATTTAAGAC+CGG | + | chr3.3:47731796-47731815 | MS.gene95390:intron | 20.0% |
| !!! | CTTTGATTGTTATTGTTTTA+TGG | + | chr3.3:47731503-47731522 | MS.gene95390:intron | 20.0% |
| !!! | TTGAAGTGTCTTTAATTAAA+AGG | - | chr3.3:47732019-47732038 | None:intergenic | 20.0% |
| ! | AATTATACTGCTTCAAACAT+AGG | - | chr3.3:47733683-47733702 | None:intergenic | 25.0% |
| ! | ATAACATAAATGAAACTTGC+AGG | + | chr3.3:47732191-47732210 | MS.gene95390:intron | 25.0% |
| ! | ATAGGTAGTACTGTTATTAT+TGG | - | chr3.3:47733665-47733684 | None:intergenic | 25.0% |
| ! | ATATTTGATACTCTAATCCA+AGG | + | chr3.3:47732498-47732517 | MS.gene95390:CDS | 25.0% |
| ! | ATGAATCAAATACCTTGATT+TGG | - | chr3.3:47731735-47731754 | None:intergenic | 25.0% |
| ! | ATGGGACCAAAAAAAAATAA+AGG | - | chr3.3:47733785-47733804 | None:intergenic | 25.0% |
| ! | CAAAAACGAAAATTATGAGA+GGG | + | chr3.3:47734059-47734078 | MS.gene95390:intron | 25.0% |
| ! | CATTGGCAAAATTACATTAA+AGG | + | chr3.3:47733727-47733746 | MS.gene95390:intron | 25.0% |
| ! | GAAGGAATTATAAAGGTTTA+CGG | + | chr3.3:47733613-47733632 | MS.gene95390:intron | 25.0% |
| ! | GTCAATCAATCAATATTAGA+GGG | - | chr3.3:47732776-47732795 | None:intergenic | 25.0% |
| ! | TAGGTAGTACTGTTATTATT+GGG | - | chr3.3:47733664-47733683 | None:intergenic | 25.0% |
| ! | TCAACTCTTGAACATATTTA+TGG | + | chr3.3:47731599-47731618 | MS.gene95390:intron | 25.0% |
| ! | TGAATCAAATACCTTGATTT+GGG | - | chr3.3:47731734-47731753 | None:intergenic | 25.0% |
| !! | AAAACGTAAGAAAGCAATTT+TGG | + | chr3.3:47732278-47732297 | MS.gene95390:intron | 25.0% |
| !! | AGGTATTTGATTCATTTTAG+TGG | + | chr3.3:47731740-47731759 | MS.gene95390:intron | 25.0% |
| !! | CATTTCGATTTGATCATAAT+GGG | + | chr3.3:47731826-47731845 | MS.gene95390:intron | 25.0% |
| !! | CCAAAAACAATTGTTTGTTA+TGG | - | chr3.3:47732867-47732886 | None:intergenic | 25.0% |
| !! | CCATAACAAACAATTGTTTT+TGG | + | chr3.3:47732864-47732883 | MS.gene95390:intron | 25.0% |
| !! | GTGTTCAAAATTTGCTTAAA+GGG | + | chr3.3:47731532-47731551 | MS.gene95390:intron | 25.0% |
| !! | TGTGTTCAAAATTTGCTTAA+AGG | + | chr3.3:47731531-47731550 | MS.gene95390:intron | 25.0% |
| !! | TGTTCAAAATTTGCTTAAAG+GGG | + | chr3.3:47731533-47731552 | MS.gene95390:intron | 25.0% |
| !! | TTTAGAATGTTTGATCTTGA+TGG | - | chr3.3:47732716-47732735 | None:intergenic | 25.0% |
| !!! | ACAAACAATTGTTTTTGGTT+TGG | + | chr3.3:47732869-47732888 | MS.gene95390:intron | 25.0% |
| !!! | ATGGTGAATCATTTTTTTGA+AGG | + | chr3.3:47731618-47731637 | MS.gene95390:intron | 25.0% |
| !!! | ATTAAGGAAACGTTTTGAAA+AGG | + | chr3.3:47732461-47732480 | MS.gene95390:CDS | 25.0% |
| !!! | CAAACAATTGTTTTTGGTTT+GGG | + | chr3.3:47732870-47732889 | MS.gene95390:intron | 25.0% |
| !!! | GATCATAATGGGTTATATAT+GGG | + | chr3.3:47731837-47731856 | MS.gene95390:intron | 25.0% |
| !!! | GATTGTTATTGTTTTATGGA+TGG | + | chr3.3:47731507-47731526 | MS.gene95390:intron | 25.0% |
| !!! | GCTCAAATATTTTTTATCTG+AGG | - | chr3.3:47731381-47731400 | None:intergenic | 25.0% |
| !!! | GTAATTTTCGTTTTTGGATT+TGG | - | chr3.3:47734086-47734105 | None:intergenic | 25.0% |
| !!! | TGATCATAATGGGTTATATA+TGG | + | chr3.3:47731836-47731855 | MS.gene95390:intron | 25.0% |
| !!! | TGTCCAGACATTTTTTATTT+GGG | + | chr3.3:47731473-47731492 | MS.gene95390:intron | 25.0% |
| !!! | TTAAGGAAACGTTTTGAAAA+GGG | + | chr3.3:47732462-47732481 | MS.gene95390:CDS | 25.0% |
| !!! | TTGTCCAGACATTTTTTATT+TGG | + | chr3.3:47731472-47731491 | MS.gene95390:intron | 25.0% |
| !!! | TTTTGAAAAGGGCAATAAAA+TGG | + | chr3.3:47732473-47732492 | MS.gene95390:CDS | 25.0% |
| AAATGATGTGGCATATCAAA+TGG | + | chr3.3:47732604-47732623 | MS.gene95390:CDS | 30.0% | |
| AAATGGCATAGTTGAAATAG+TGG | + | chr3.3:47732332-47732351 | MS.gene95390:CDS | 30.0% | |
| AACGGTTGTAAAACAATCAT+TGG | - | chr3.3:47731971-47731990 | None:intergenic | 30.0% | |
| AATCCCAAAAGTAGTTTCTT+TGG | - | chr3.3:47733380-47733399 | None:intergenic | 30.0% | |
| AATCCTTATGAAACGTACTT+GGG | + | chr3.3:47731651-47731670 | MS.gene95390:CDS | 30.0% | |
| AGAGAAACAAAGACCAATTA+CGG | - | chr3.3:47733285-47733304 | None:intergenic | 30.0% | |
| AGATGAAGCAAAAACACATA+TGG | + | chr3.3:47731571-47731590 | MS.gene95390:intron | 30.0% | |
| AGCAAGTGACTATATAAATG+AGG | - | chr3.3:47733496-47733515 | None:intergenic | 30.0% | |
| AGCACAAATTTATTCAACAG+TGG | + | chr3.3:47732229-47732248 | MS.gene95390:intron | 30.0% | |
| CAAAAACGAAAATTACGAGA+GGG | + | chr3.3:47734090-47734109 | MS.gene95390:intron | 30.0% | |
| CCAAAAACGAAAATTATGAG+AGG | + | chr3.3:47734058-47734077 | MS.gene95390:intron | 30.0% | |
| CCATTATGATCAAATCGAAA+TGG | - | chr3.3:47731828-47731847 | None:intergenic | 30.0% | |
| CTAAGAAGATCAATGTAAAG+TGG | - | chr3.3:47733551-47733570 | None:intergenic | 30.0% | |
| CTTTACATTGATCTTCTTAG+AGG | + | chr3.3:47733551-47733570 | MS.gene95390:CDS | 30.0% | |
| GGACTAAATCCAAAAAAAGA+CGG | + | chr3.3:47734111-47734130 | MS.gene95390:intron | 30.0% | |
| GGTCAATCAATCAATATTAG+AGG | - | chr3.3:47732777-47732796 | None:intergenic | 30.0% | |
| TAATCCTTATGAAACGTACT+TGG | + | chr3.3:47731650-47731669 | MS.gene95390:CDS | 30.0% | |
| TCACACAATCAAAATATCAG+TGG | - | chr3.3:47732798-47732817 | None:intergenic | 30.0% | |
| TCGCAACAAAAAAACTTACA+GGG | - | chr3.3:47733872-47733891 | None:intergenic | 30.0% | |
| TGTGAATGAGTTAGTAAGTT+AGG | + | chr3.3:47732813-47732832 | MS.gene95390:intron | 30.0% | |
| TTAACTTCGTATATGGAACT+TGG | - | chr3.3:47732378-47732397 | None:intergenic | 30.0% | |
| TTAGTGTTCATAGTTCGAAT+TGG | - | chr3.3:47732904-47732923 | None:intergenic | 30.0% | |
| TTCCATATACGAAGTTAACA+TGG | + | chr3.3:47732380-47732399 | MS.gene95390:CDS | 30.0% | |
| TTCCATGTTAACTTCGTATA+TGG | - | chr3.3:47732385-47732404 | None:intergenic | 30.0% | |
| TTCGCAACAAAAAAACTTAC+AGG | - | chr3.3:47733873-47733892 | None:intergenic | 30.0% | |
| TTGAACCATTTGTCCAAATA+TGG | - | chr3.3:47734373-47734392 | None:intergenic | 30.0% | |
| TTTAGATAACGAGATCAACT+AGG | - | chr3.3:47731337-47731356 | None:intergenic | 30.0% | |
| ! | CCATTTCGATTTGATCATAA+TGG | + | chr3.3:47731825-47731844 | MS.gene95390:intron | 30.0% |
| ! | CCTCTCATAATTTTCGTTTT+TGG | - | chr3.3:47734061-47734080 | None:intergenic | 30.0% |
| ! | GGTCCCATTTAGTTTATTTA+TGG | + | chr3.3:47733797-47733816 | MS.gene95390:intron | 30.0% |
| ! | TTTGCCAAAGAAACTACTTT+TGG | + | chr3.3:47733373-47733392 | MS.gene95390:CDS | 30.0% |
| !! | CAATTGTTTGTTATGGTCAA+TGG | - | chr3.3:47732860-47732879 | None:intergenic | 30.0% |
| !! | GATTGTTTTACAACCGTTTT+TGG | + | chr3.3:47731973-47731992 | MS.gene95390:intron | 30.0% |
| !! | TTGCCAAAGAAACTACTTTT+GGG | + | chr3.3:47733374-47733393 | MS.gene95390:CDS | 30.0% |
| !! | TTTGTTATGGTCAATGGTTT+TGG | - | chr3.3:47732854-47732873 | None:intergenic | 30.0% |
| !!! | AATTGTTTTTGGTTTGGGTT+GGG | + | chr3.3:47732875-47732894 | MS.gene95390:intron | 30.0% |
| !!! | ATTTTAACTGCAGCAAGAAA+TGG | + | chr3.3:47732315-47732334 | MS.gene95390:intron | 30.0% |
| !!! | GTCCAGACATTTTTTATTTG+GGG | + | chr3.3:47731474-47731493 | MS.gene95390:intron | 30.0% |
| !!! | TTGAGATTACCGTCTTTTTT+TGG | - | chr3.3:47734123-47734142 | None:intergenic | 30.0% |
| AAAACTATGCCACATGTCTT+TGG | + | chr3.3:47731252-47731271 | MS.gene95390:CDS | 35.0% | |
| AAACCAATAGGAGATATGAG+TGG | + | chr3.3:47731684-47731703 | MS.gene95390:CDS | 35.0% | |
| AAAGCAAATGCTTCAAATCC+AGG | - | chr3.3:47733257-47733276 | None:intergenic | 35.0% | |
| AAGCAAAAACACATATGGAG+TGG | + | chr3.3:47731576-47731595 | MS.gene95390:intron | 35.0% | |
| ACCATTTGTCCAAATATGGT+CGG | - | chr3.3:47734369-47734388 | None:intergenic | 35.0% | |
| CACCAGATATGTAACAATCT+CGG | - | chr3.3:47732575-47732594 | None:intergenic | 35.0% | |
| CCAAAAACGAAAATTACGAG+AGG | + | chr3.3:47734089-47734108 | MS.gene95390:intron | 35.0% | |
| CGGTGAATTGAAAATGTGAT+TGG | + | chr3.3:47733633-47733652 | MS.gene95390:intron | 35.0% | |
| CTTCAAAAACCAAAGACATG+TGG | - | chr3.3:47731264-47731283 | None:intergenic | 35.0% | |
| GACCCCAAATAAAAAATGTC+TGG | - | chr3.3:47731479-47731498 | None:intergenic | 35.0% | |
| GATATGCCACATCATTTCAA+GGG | - | chr3.3:47732601-47732620 | None:intergenic | 35.0% | |
| GTTCCTTTCGTGAAATTAGT+TGG | - | chr3.3:47734298-47734317 | None:intergenic | 35.0% | |
| TGATATGCCACATCATTTCA+AGG | - | chr3.3:47732602-47732621 | None:intergenic | 35.0% | |
| TTCGAGAAGTGACTATAGAA+AGG | - | chr3.3:47733328-47733347 | None:intergenic | 35.0% | |
| TTCTTTAATGTACTGCTCCA+TGG | - | chr3.3:47733003-47733022 | None:intergenic | 35.0% | |
| TTTGCATACATCTGTATCCT+TGG | + | chr3.3:47731284-47731303 | MS.gene95390:CDS | 35.0% | |
| TTTGCTTTGTCATCCGTAAT+TGG | + | chr3.3:47733269-47733288 | MS.gene95390:CDS | 35.0% | |
| ! | ACACAACGTGCTTGTATTTT+TGG | - | chr3.3:47733472-47733491 | None:intergenic | 35.0% |
| ! | ACTCATATCTCCTATTGGTT+TGG | - | chr3.3:47731685-47731704 | None:intergenic | 35.0% |
| ! | CCTCTCGTAATTTTCGTTTT+TGG | - | chr3.3:47734092-47734111 | None:intergenic | 35.0% |
| ! | CTTATCCTTCTGATTTTCGA+GGG | - | chr3.3:47732133-47732152 | None:intergenic | 35.0% |
| ! | TCTTATCCTTCTGATTTTCG+AGG | - | chr3.3:47732134-47732153 | None:intergenic | 35.0% |
| !! | GGTGATTTTAAGAGAGAAGA+AGG | - | chr3.3:47734172-47734191 | None:intergenic | 35.0% |
| !!! | ATGTGCGTTTTTTTAACGGA+TGG | - | chr3.3:47733943-47733962 | None:intergenic | 35.0% |
| !!! | CAATTGTTTTTGGTTTGGGT+TGG | + | chr3.3:47732874-47732893 | MS.gene95390:intron | 35.0% |
| !!! | CCACATGTGCGTTTTTTTAA+CGG | - | chr3.3:47733947-47733966 | None:intergenic | 35.0% |
| !!! | CTCTGGTATTTTGTTTTTGC+AGG | - | chr3.3:47734614-47734633 | None:intergenic | 35.0% |
| !!! | GTTTTTTTAACGGATGGTGA+CGG | - | chr3.3:47733937-47733956 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGCAGGTTTTAGC+TGG | - | chr3.3:47734604-47734623 | None:intergenic | 35.0% |
| AAAAACGCACATGTGGCTAA+CGG | + | chr3.3:47733951-47733970 | MS.gene95390:intron | 40.0% | |
| AAAAGCTCCTTCTTCTTCTC+AGG | + | chr3.3:47734143-47734162 | MS.gene95390:CDS | 40.0% | |
| ACAGGTGAACCAACATTGAA+AGG | + | chr3.3:47733227-47733246 | MS.gene95390:CDS | 40.0% | |
| AGTGCCAAAGACAAGTGATA+AGG | + | chr3.3:47733586-47733605 | MS.gene95390:intron | 40.0% | |
| ATCACTTGTCTTTGGCACTT+TGG | - | chr3.3:47733585-47733604 | None:intergenic | 40.0% | |
| ATGGTGCGAAAGTAGTAAGA+AGG | - | chr3.3:47732984-47733003 | None:intergenic | 40.0% | |
| ATTCGGATTCACAGCAATCA+AGG | + | chr3.3:47732652-47732671 | MS.gene95390:intron | 40.0% | |
| CCGTTAAAAAAACGCACATG+TGG | + | chr3.3:47733944-47733963 | MS.gene95390:intron | 40.0% | |
| CGTGAAATTAGTTGGACCAA+TGG | - | chr3.3:47734290-47734309 | None:intergenic | 40.0% | |
| GAAAAGGGTCGACAAAAAAG+TGG | - | chr3.3:47734320-47734339 | None:intergenic | 40.0% | |
| GACCGAGATTGTTACATATC+TGG | + | chr3.3:47732570-47732589 | MS.gene95390:CDS | 40.0% | |
| GGAGCAGTACATTAAAGAAC+TGG | + | chr3.3:47733004-47733023 | MS.gene95390:intron | 40.0% | |
| GGTCCAACTAATTTCACGAA+AGG | + | chr3.3:47734292-47734311 | MS.gene95390:intron | 40.0% | |
| GTGCCAAAGACAAGTGATAA+GGG | + | chr3.3:47733587-47733606 | MS.gene95390:intron | 40.0% | |
| GTGGCATATCAAATGGTTTG+AGG | + | chr3.3:47732611-47732630 | MS.gene95390:CDS | 40.0% | |
| GTTCCACTCATATCTCCTAT+TGG | - | chr3.3:47731690-47731709 | None:intergenic | 40.0% | |
| GTTCCCAAGTACGTTTCATA+AGG | - | chr3.3:47731657-47731676 | None:intergenic | 40.0% | |
| TATGAAACGTACTTGGGAAC+CGG | + | chr3.3:47731657-47731676 | MS.gene95390:CDS | 40.0% | |
| TCCGACCATATTTGGACAAA+TGG | + | chr3.3:47734365-47734384 | MS.gene95390:intron | 40.0% | |
| TCGCTTGAGTTCTCCAAAAA+CGG | - | chr3.3:47731989-47732008 | None:intergenic | 40.0% | |
| TCTAATCCAAGGAGTGGATA+AGG | + | chr3.3:47732509-47732528 | MS.gene95390:CDS | 40.0% | |
| TCTGCTTACAACCCAAATCA+AGG | + | chr3.3:47731720-47731739 | MS.gene95390:CDS | 40.0% | |
| TGATAAATGATGCTAGTGCG+TGG | + | chr3.3:47733105-47733124 | MS.gene95390:CDS | 40.0% | |
| TGATACTCTAATCCAAGGAG+TGG | + | chr3.3:47732503-47732522 | MS.gene95390:CDS | 40.0% | |
| TGCCAAAGACAAGTGATAAG+GGG | + | chr3.3:47733588-47733607 | MS.gene95390:intron | 40.0% | |
| TGGTGCGAAAGTAGTAAGAA+GGG | - | chr3.3:47732983-47733002 | None:intergenic | 40.0% | |
| TTCGGATTCACAGCAATCAA+GGG | + | chr3.3:47732653-47732672 | MS.gene95390:intron | 40.0% | |
| TTCTTACTACTTTCGCACCA+TGG | + | chr3.3:47732983-47733002 | MS.gene95390:intron | 40.0% | |
| TTTCTAACTGTGAAATGCGC+TGG | - | chr3.3:47733032-47733051 | None:intergenic | 40.0% | |
| ! | AGACATGTGGCATAGTTTTC+TGG | - | chr3.3:47731251-47731270 | None:intergenic | 40.0% |
| !! | GTAACAATCTCGGTCACTTT+TGG | - | chr3.3:47732565-47732584 | None:intergenic | 40.0% |
| ACAAACATTGTCCCCCTTGA+TGG | + | chr3.3:47734427-47734446 | MS.gene95390:intron | 45.0% | |
| ACCAGTGAACATGGCAACAA+TGG | - | chr3.3:47733420-47733439 | None:intergenic | 45.0% | |
| AGAGCAGAAACCAGTGAACA+TGG | - | chr3.3:47733429-47733448 | None:intergenic | 45.0% | |
| AGAGGGTCTAGATTCAAGCT+CGG | - | chr3.3:47732759-47732778 | None:intergenic | 45.0% | |
| AGGGGCGGAAGGAATTATAA+AGG | + | chr3.3:47733606-47733625 | MS.gene95390:intron | 45.0% | |
| AGGTGGACATCACCAGTATT+CGG | + | chr3.3:47734470-47734489 | MS.gene95390:CDS | 45.0% | |
| CAAAGACAAGTGATAAGGGG+CGG | + | chr3.3:47733591-47733610 | MS.gene95390:intron | 45.0% | |
| CAAATCGAAATGGCTCTCTC+CGG | - | chr3.3:47731818-47731837 | None:intergenic | 45.0% | |
| CACGAACTTCAGAACCTGAT+AGG | + | chr3.3:47734569-47734588 | MS.gene95390:CDS | 45.0% | |
| CCAAAAACACGCGAACTTAC+AGG | - | chr3.3:47733842-47733861 | None:intergenic | 45.0% | |
| CCAACATTGAAAGGAAAGCC+TGG | + | chr3.3:47733236-47733255 | MS.gene95390:CDS | 45.0% | |
| CCAGGCTTTCCTTTCAATGT+TGG | - | chr3.3:47733239-47733258 | None:intergenic | 45.0% | |
| CCTTAATGCCTCAACGACAT+TGG | - | chr3.3:47732448-47732467 | None:intergenic | 45.0% | |
| CGTCGAGAGGATAAGGAAAA+TGG | - | chr3.3:47734259-47734278 | None:intergenic | 45.0% | |
| CTACTGCATACCAAGTCACA+GGG | - | chr3.3:47733520-47733539 | None:intergenic | 45.0% | |
| GACACTTACCAACTCCTGAA+AGG | - | chr3.3:47731310-47731329 | None:intergenic | 45.0% | |
| GCTGGATTCATCTTCCTATC+AGG | - | chr3.3:47734586-47734605 | None:intergenic | 45.0% | |
| GTAGTAGCAGCACAACTTGT+TGG | + | chr3.3:47733155-47733174 | MS.gene95390:CDS | 45.0% | |
| TCCATTGTTGCCATGTTCAC+TGG | + | chr3.3:47733416-47733435 | MS.gene95390:CDS | 45.0% | |
| TCCTTCCCTCGAAAATCAGA+AGG | + | chr3.3:47732125-47732144 | MS.gene95390:intron | 45.0% | |
| TCTCTTCCTTATCCACTCCT+TGG | - | chr3.3:47732518-47732537 | None:intergenic | 45.0% | |
| TGCTTGTAGCAGTTGAGAAC+AGG | + | chr3.3:47732418-47732437 | MS.gene95390:CDS | 45.0% | |
| TGGTAACACGGAGATCAATC+TGG | - | chr3.3:47732100-47732119 | None:intergenic | 45.0% | |
| TTGTATCCGAATTTCGCAGC+AGG | - | chr3.3:47734411-47734430 | None:intergenic | 45.0% | |
| TTTCCTTATCCTCTCGACGA+GGG | + | chr3.3:47734260-47734279 | MS.gene95390:intron | 45.0% | |
| ! | ATCTGTATCCTTGGCCTTTC+AGG | + | chr3.3:47731293-47731312 | MS.gene95390:CDS | 45.0% |
| ! | CCAATGTCGTTGAGGCATTA+AGG | + | chr3.3:47732445-47732464 | MS.gene95390:CDS | 45.0% |
| ! | CCTGTAAGTTCGCGTGTTTT+TGG | + | chr3.3:47733839-47733858 | MS.gene95390:intron | 45.0% |
| ! | CTTTTTCCGATCAGTGCACT+TGG | - | chr3.3:47734231-47734250 | None:intergenic | 45.0% |
| ! | TGGATTTGGTCCCTGAAACT+TGG | - | chr3.3:47734041-47734060 | None:intergenic | 45.0% |
| ! | TTTTCCTTATCCTCTCGACG+AGG | + | chr3.3:47734259-47734278 | MS.gene95390:intron | 45.0% |
| !! | ATCTCCTATTGGTTTGGTGC+CGG | - | chr3.3:47731679-47731698 | None:intergenic | 45.0% |
| !! | ATGTTCACTGGTTTCTGCTC+TGG | + | chr3.3:47733428-47733447 | MS.gene95390:CDS | 45.0% |
| !! | TCCTTCTGATTTTCGAGGGA+AGG | - | chr3.3:47732129-47732148 | None:intergenic | 45.0% |
| !!! | ATTTATTTTATTTTTTCATT+CGG | + | chr3.3:47732635-47732654 | MS.gene95390:intron | 5.0% |
| !!! | TTTATTTTTATTTTAAATCA+AGG | + | chr3.3:47731912-47731931 | MS.gene95390:intron | 5.0% |
| AACCAATTTCGCCACGTCAC+AGG | - | chr3.3:47733992-47734011 | None:intergenic | 50.0% | |
| AAGGACGCCTGAGAAGAAGA+AGG | - | chr3.3:47734153-47734172 | None:intergenic | 50.0% | |
| CACACTCCTGCTGCGAAATT+CGG | + | chr3.3:47734402-47734421 | MS.gene95390:intron | 50.0% | |
| CAGGAGAACCAATGTCGTTG+AGG | + | chr3.3:47732437-47732456 | MS.gene95390:CDS | 50.0% | |
| CGCCCCTTATCACTTGTCTT+TGG | - | chr3.3:47733593-47733612 | None:intergenic | 50.0% | |
| GCTACTGCATACCAAGTCAC+AGG | - | chr3.3:47733521-47733540 | None:intergenic | 50.0% | |
| GGAAGAAGCTTGCGTTCAGA+TGG | - | chr3.3:47731230-47731249 | None:intergenic | 50.0% | |
| GGAAGGAAGTCGTGGTAACA+CGG | - | chr3.3:47732112-47732131 | None:intergenic | 50.0% | |
| GTGCTGCCCTTGAAATGATG+TGG | + | chr3.3:47732592-47732611 | MS.gene95390:CDS | 50.0% | |
| GTTCGTGCTTCATGATGCCT+TGG | - | chr3.3:47734556-47734575 | None:intergenic | 50.0% | |
| TACCAACTCCTGAAAGGCCA+AGG | - | chr3.3:47731304-47731323 | None:intergenic | 50.0% | |
| TCACTTGCTTCCCTGTGACT+TGG | + | chr3.3:47733507-47733526 | MS.gene95390:CDS | 50.0% | |
| TGGCCAGTCACCAAGTTTCA+GGG | + | chr3.3:47734028-47734047 | MS.gene95390:intron | 50.0% | |
| TTGGTCTGGATCTTGCTCTC+TGG | - | chr3.3:47734631-47734650 | None:intergenic | 50.0% | |
| TTTCCGATCAGTGCACTTGG+TGG | - | chr3.3:47734228-47734247 | None:intergenic | 50.0% | |
| ! | AAACTTGGTGACTGGCCACA+TGG | - | chr3.3:47734026-47734045 | None:intergenic | 50.0% |
| ! | AGCGTGGTGGAAGTTGATTG+AGG | + | chr3.3:47734450-47734469 | MS.gene95390:intron | 50.0% |
| ! | ATCCTTGGCCTTTCAGGAGT+TGG | + | chr3.3:47731299-47731318 | MS.gene95390:CDS | 50.0% |
| ! | GGGGCTTTTCCGACCATATT+TGG | + | chr3.3:47734357-47734376 | MS.gene95390:intron | 50.0% |
| ! | GGTTGATGTGTCCATCCATG+TGG | + | chr3.3:47734008-47734027 | MS.gene95390:intron | 50.0% |
| ! | GTGGTGGAAGTTGATTGAGG+TGG | + | chr3.3:47734453-47734472 | MS.gene95390:CDS | 50.0% |
| ! | TCAAACGTTGTTCTGAGCGG+TGG | - | chr3.3:47734656-47734675 | None:intergenic | 50.0% |
| ! | TGTCCACCAAGTGCACTGAT+CGG | + | chr3.3:47734222-47734241 | MS.gene95390:CDS | 50.0% |
| !! | CACAGTGCTTGATGATGCGA+AGG | - | chr3.3:47733186-47733205 | None:intergenic | 50.0% |
| !! | GTTGTTCTGAGCGGTGGTTT+TGG | - | chr3.3:47734650-47734669 | None:intergenic | 50.0% |
| !! | TTTAACGGATGGTGACGGCA+GGG | - | chr3.3:47733932-47733951 | None:intergenic | 50.0% |
| !! | TTTTCGAGGGAAGGAAGTCG+TGG | - | chr3.3:47732120-47732139 | None:intergenic | 50.0% |
| !!! | TTTTAACGGATGGTGACGGC+AGG | - | chr3.3:47733933-47733952 | None:intergenic | 50.0% |
| AACGCACATGTGGCTAACGG+AGG | + | chr3.3:47733954-47733973 | MS.gene95390:intron | 55.0% | |
| AAGCCCTCGTCGAGAGGATA+AGG | - | chr3.3:47734266-47734285 | None:intergenic | 55.0% | |
| AATGGAAAGCCCTCGTCGAG+AGG | - | chr3.3:47734272-47734291 | None:intergenic | 55.0% | |
| ACTTCCACCACGCTCCATCA+AGG | - | chr3.3:47734444-47734463 | None:intergenic | 55.0% | |
| CTTCCACCACGCTCCATCAA+GGG | - | chr3.3:47734443-47734462 | None:intergenic | 55.0% | |
| GACAAGTGATAAGGGGCGGA+AGG | + | chr3.3:47733595-47733614 | MS.gene95390:intron | 55.0% | |
| GACAGAACGACGCCGAGAAT+GGG | - | chr3.3:47734206-47734225 | None:intergenic | 55.0% | |
| GACCTGTGACGTGGCGAAAT+TGG | + | chr3.3:47733987-47734006 | MS.gene95390:intron | 55.0% | |
| GGAACCGGCACCAAACCAAT+AGG | + | chr3.3:47731672-47731691 | MS.gene95390:CDS | 55.0% | |
| GTGGCCAGTCACCAAGTTTC+AGG | + | chr3.3:47734027-47734046 | MS.gene95390:intron | 55.0% | |
| GTGGCTAACGGAGGCTGATA+TGG | + | chr3.3:47733963-47733982 | MS.gene95390:intron | 55.0% | |
| TCTCGACGAGGGCTTTCCAT+TGG | + | chr3.3:47734271-47734290 | MS.gene95390:intron | 55.0% | |
| TGATATGGCGACCTGTGACG+TGG | + | chr3.3:47733978-47733997 | MS.gene95390:intron | 55.0% | |
| TGATGCTAGTGCGTGGCTCA+AGG | + | chr3.3:47733112-47733131 | MS.gene95390:CDS | 55.0% | |
| TTCCACCACGCTCCATCAAG+GGG | - | chr3.3:47734442-47734461 | None:intergenic | 55.0% | |
| ! | ACCCTTTTCTTCCTCCACCG+CGG | + | chr3.3:47734331-47734350 | MS.gene95390:intron | 55.0% |
| ! | CGCAGCAGGAGTGTGAGTTA+GGG | - | chr3.3:47734397-47734416 | None:intergenic | 55.0% |
| ! | CGCATCATCAAGCACTGTGC+CGG | + | chr3.3:47733187-47733206 | MS.gene95390:CDS | 55.0% |
| ! | GCATCATCAAGCACTGTGCC+GGG | + | chr3.3:47733188-47733207 | MS.gene95390:CDS | 55.0% |
| ! | GGTCCCTGAAACTTGGTGAC+TGG | - | chr3.3:47734034-47734053 | None:intergenic | 55.0% |
| ! | TCGCAGCAGGAGTGTGAGTT+AGG | - | chr3.3:47734398-47734417 | None:intergenic | 55.0% |
| ! | TTGGTGACTGGCCACATGGA+TGG | - | chr3.3:47734022-47734041 | None:intergenic | 55.0% |
| !!! | TCTGAGCGGTGGTTTTGGTC+TGG | - | chr3.3:47734645-47734664 | None:intergenic | 55.0% |
| ACCCGCGGTGGAGGAAGAAA+AGG | - | chr3.3:47734336-47734355 | None:intergenic | 60.0% | |
| CCCGCGGTGGAGGAAGAAAA+GGG | - | chr3.3:47734335-47734354 | None:intergenic | 60.0% | |
| GGACAGAACGACGCCGAGAA+TGG | - | chr3.3:47734207-47734226 | None:intergenic | 60.0% | |
| GGCAGCGCGAGAATCTTCCA+AGG | + | chr3.3:47734536-47734555 | MS.gene95390:CDS | 60.0% | |
| GGTGGCAACGACGGTGAAAC+AGG | + | chr3.3:47733209-47733228 | MS.gene95390:CDS | 60.0% | |
| GTTTCACCGTCGTTGCCACC+CGG | - | chr3.3:47733209-47733228 | None:intergenic | 60.0% | |
| TCCACCACGCTCCATCAAGG+GGG | - | chr3.3:47734441-47734460 | None:intergenic | 60.0% | |
| TTCTTCCTCCACCGCGGGTA+GGG | + | chr3.3:47734337-47734356 | MS.gene95390:intron | 60.0% | |
| TTGTCCCCCTTGATGGAGCG+TGG | + | chr3.3:47734434-47734453 | MS.gene95390:intron | 60.0% | |
| TTTCTTCCTCCACCGCGGGT+AGG | + | chr3.3:47734336-47734355 | MS.gene95390:intron | 60.0% | |
| ! | AGTGACGGAACCGGTCACGA+TGG | - | chr3.3:47734507-47734526 | None:intergenic | 60.0% |
| ! | CCCTTTTCTTCCTCCACCGC+GGG | + | chr3.3:47734332-47734351 | MS.gene95390:intron | 60.0% |
| ! | TCATCAAGCACTGTGCCGGG+TGG | + | chr3.3:47733191-47733210 | MS.gene95390:CDS | 60.0% |
| ACAGCTCGCGCCATCGTGAC+CGG | + | chr3.3:47734494-47734513 | MS.gene95390:CDS | 65.0% | |
| ACTGTGCCGGGTGGCAACGA+CGG | + | chr3.3:47733200-47733219 | MS.gene95390:CDS | 65.0% | |
| CACCGCCGCTGACCCATTCT+CGG | + | chr3.3:47734191-47734210 | MS.gene95390:CDS | 65.0% | |
| CGACGCCGAGAATGGGTCAG+CGG | - | chr3.3:47734199-47734218 | None:intergenic | 65.0% | |
| GCGCGAGCTGTGCCGAATAC+TGG | - | chr3.3:47734485-47734504 | None:intergenic | 65.0% | |
| GTCGGAAAAGCCCCTACCCG+CGG | - | chr3.3:47734351-47734370 | None:intergenic | 65.0% | |
| TCCCCCTTGATGGAGCGTGG+TGG | + | chr3.3:47734437-47734456 | MS.gene95390:intron | 65.0% | |
| TCTTCCTCCACCGCGGGTAG+GGG | + | chr3.3:47734338-47734357 | MS.gene95390:intron | 65.0% | |
| AAAGCCCCTACCCGCGGTGG+AGG | - | chr3.3:47734345-47734364 | None:intergenic | 70.0% | |
| CGAGAATGGGTCAGCGGCGG+TGG | - | chr3.3:47734193-47734212 | None:intergenic | 70.0% | |
| CGCCGAGAATGGGTCAGCGG+CGG | - | chr3.3:47734196-47734215 | None:intergenic | 70.0% | |
| CGGTTCCGTCACTGCCGCTG+CGG | + | chr3.3:47734514-47734533 | MS.gene95390:CDS | 70.0% | |
| GATTCTCGCGCTGCCCGCAG+CGG | - | chr3.3:47734531-47734550 | None:intergenic | 70.0% | |
| GGAAAAGCCCCTACCCGCGG+TGG | - | chr3.3:47734348-47734367 | None:intergenic | 70.0% | |
| GGTTCCGTCACTGCCGCTGC+GGG | + | chr3.3:47734515-47734534 | MS.gene95390:CDS | 70.0% | |
| ! | CGCAGCGGCAGTGACGGAAC+CGG | - | chr3.3:47734516-47734535 | None:intergenic | 70.0% |
| GCTGCCCGCAGCGGCAGTGA+CGG | - | chr3.3:47734522-47734541 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 47731203 | 47734675 | 47731203 | ID=MS.gene95390 |
| chr3.3 | mRNA | 47731203 | 47734675 | 47731203 | ID=MS.gene95390.t1;Parent=MS.gene95390 |
| chr3.3 | exon | 47731203 | 47731320 | 47731203 | ID=MS.gene95390.t1.exon1;Parent=MS.gene95390.t1 |
| chr3.3 | CDS | 47731203 | 47731320 | 47731203 | ID=cds.MS.gene95390.t1;Parent=MS.gene95390.t1 |
| chr3.3 | exon | 47731640 | 47731741 | 47731640 | ID=MS.gene95390.t1.exon2;Parent=MS.gene95390.t1 |
| chr3.3 | CDS | 47731640 | 47731741 | 47731640 | ID=cds.MS.gene95390.t1;Parent=MS.gene95390.t1 |
| chr3.3 | exon | 47732328 | 47732632 | 47732328 | ID=MS.gene95390.t1.exon3;Parent=MS.gene95390.t1 |
| chr3.3 | CDS | 47732328 | 47732632 | 47732328 | ID=cds.MS.gene95390.t1;Parent=MS.gene95390.t1 |
| chr3.3 | exon | 47733011 | 47733572 | 47733011 | ID=MS.gene95390.t1.exon4;Parent=MS.gene95390.t1 |
| chr3.3 | CDS | 47733011 | 47733572 | 47733011 | ID=cds.MS.gene95390.t1;Parent=MS.gene95390.t1 |
| chr3.3 | exon | 47734130 | 47734249 | 47734130 | ID=MS.gene95390.t1.exon5;Parent=MS.gene95390.t1 |
| chr3.3 | CDS | 47734130 | 47734249 | 47734130 | ID=cds.MS.gene95390.t1;Parent=MS.gene95390.t1 |
| chr3.3 | exon | 47734452 | 47734675 | 47734452 | ID=MS.gene95390.t1.exon6;Parent=MS.gene95390.t1 |
| chr3.3 | CDS | 47734452 | 47734675 | 47734452 | ID=cds.MS.gene95390.t1;Parent=MS.gene95390.t1 |
| Gene Sequence |
| Protein sequence |
