Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054801.t1 | XP_003602846.1 | 96.3 | 54 | 2 | 0 | 1 | 54 | 17 | 70 | 2.80E-22 | 113.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054801.t1 | Q41001 | 87.3 | 55 | 6 | 1 | 1 | 54 | 18 | 72 | 6.0e-21 | 100.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054801.t1 | B7FHG1 | 96.3 | 54 | 2 | 0 | 1 | 54 | 17 | 70 | 2.0e-22 | 113.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene054801 | 0.809493 | 1.84E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene054801 | 0.803554 | 3.30E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene054801 | 0.808506 | 3.00E-50 | -1.69E-46 |
| MS.gene051199 | MS.gene054801 | 0.801854 | 7.40E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene054801 | 0.808792 | 2.60E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene054801 | 0.80394 | 2.74E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene054801 | 0.861705 | 8.50E-64 | -1.69E-46 |
| MS.gene051719 | MS.gene054801 | 0.816222 | 6.18E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene054801 | 0.810026 | 1.41E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene054801 | 0.816766 | 4.67E-52 | -1.69E-46 |
| MS.gene052456 | MS.gene054801 | 0.818941 | 1.51E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene054801 | 0.805636 | 1.21E-49 | -1.69E-46 |
| MS.gene053164 | MS.gene054801 | 0.80545 | 1.33E-49 | -1.69E-46 |
| MS.gene053621 | MS.gene054801 | 0.807573 | 4.73E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene054801 | 0.807432 | 5.07E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene054801 | 0.8203 | 7.38E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene054801 | 0.864702 | 1.01E-64 | -1.69E-46 |
| MS.gene054801 | MS.gene055228 | 0.800731 | 1.26E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene055357 | 0.803216 | 3.88E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene055466 | 0.804905 | 1.73E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene055608 | 0.806793 | 6.92E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene055818 | 0.810545 | 1.09E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene055926 | 0.826447 | 2.70E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene056050 | 0.80165 | 8.15E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene056174 | 0.804647 | 1.95E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene056252 | 0.800194 | 1.62E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene057444 | 0.821559 | 3.79E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene058010 | 0.802043 | 6.77E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene058515 | 0.855185 | 7.47E-62 | -1.69E-46 |
| MS.gene054801 | MS.gene059276 | 0.809804 | 1.58E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene060137 | -0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene060503 | 0.803969 | 2.71E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene061485 | 0.813509 | 2.47E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene061872 | 0.807935 | 3.96E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene062042 | 0.807861 | 4.11E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene062100 | 0.810222 | 1.28E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene062743 | 0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene064944 | 0.805433 | 1.34E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene065347 | 0.823255 | 1.53E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene065667 | 0.801834 | 7.47E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene065770 | 0.803415 | 3.52E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene065863 | 0.882788 | 7.77E-71 | -1.69E-46 |
| MS.gene054801 | MS.gene065865 | 0.831247 | 1.86E-55 | -1.69E-46 |
| MS.gene054801 | MS.gene065867 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene066335 | 0.817085 | 3.96E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene066436 | 0.828958 | 6.73E-55 | -1.69E-46 |
| MS.gene054801 | MS.gene066782 | 0.811153 | 8.07E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene066784 | 0.814532 | 1.47E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene06697 | 0.826392 | 2.78E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene067163 | 0.8091 | 2.24E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene06723 | 0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene067485 | 0.80874 | 2.67E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene067636 | 0.800321 | 1.52E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene068010 | 0.820639 | 6.17E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene068012 | 0.832936 | 7.11E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene068183 | 0.800442 | 1.44E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene068924 | 0.831172 | 1.94E-55 | -1.69E-46 |
| MS.gene054801 | MS.gene069956 | 0.812871 | 3.41E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene071033 | 0.811194 | 7.91E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene071061 | 0.806816 | 6.84E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene071247 | 0.800285 | 1.55E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene071314 | 0.806006 | 1.01E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene071444 | 0.805304 | 1.42E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene071445 | 0.827802 | 1.28E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene072283 | 0.801551 | 8.54E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene072397 | -0.808246 | 3.40E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene073083 | 0.824573 | 7.50E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene073260 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene07733 | 0.806902 | 6.57E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene07876 | 0.807714 | 4.42E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene09450 | 0.808103 | 3.65E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene09451 | 0.841285 | 5.21E-58 | -1.69E-46 |
| MS.gene054801 | MS.gene09959 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene20558 | 0.811195 | 7.91E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene21154 | 0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene21613 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene21697 | 0.801607 | 8.31E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene22091 | 0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene22611 | 0.819562 | 1.09E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene22710 | 0.810642 | 1.04E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene24283 | 0.801786 | 7.64E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene24389 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene24651 | 0.807723 | 4.40E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene25777 | 0.811025 | 8.61E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene25778 | 0.804835 | 1.78E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene26098 | 0.817324 | 3.50E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene26610 | 0.83523 | 1.89E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene26659 | 0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene27859 | 0.801215 | 1.00E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene28659 | 0.823761 | 1.16E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene29022 | 0.82308 | 1.68E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene29489 | 0.817583 | 3.06E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene30530 | 0.806445 | 8.20E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene30882 | 0.822074 | 2.88E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene31283 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene31397 | 0.801366 | 9.32E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene31421 | 0.804863 | 1.76E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene31433 | 0.805828 | 1.11E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene31652 | 0.804989 | 1.66E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene31803 | 0.809097 | 2.24E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene34065 | 0.828605 | 8.19E-55 | -1.69E-46 |
| MS.gene054801 | MS.gene34180 | 0.842315 | 2.79E-58 | -1.69E-46 |
| MS.gene054801 | MS.gene35375 | 0.820137 | 8.04E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene35631 | 0.816886 | 4.39E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene36313 | 0.805127 | 1.55E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene37647 | 0.807968 | 3.90E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene38429 | 0.815881 | 7.37E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene38601 | 0.826373 | 2.81E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene39549 | 0.842038 | 3.30E-58 | -1.69E-46 |
| MS.gene054801 | MS.gene41121 | 0.806151 | 9.46E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene41450 | 0.815496 | 8.97E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene43019 | 0.803444 | 3.48E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene43075 | 0.821577 | 3.75E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene44217 | 0.810258 | 1.26E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene44743 | 0.823149 | 1.62E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene45775 | 0.80524 | 1.47E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene45918 | 0.817051 | 4.03E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene46359 | 0.802415 | 5.67E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene47603 | 0.821686 | 3.54E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene47689 | 0.803481 | 3.42E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene48097 | 0.809946 | 1.47E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene48839 | 0.816366 | 5.74E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene51459 | 0.834807 | 2.42E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene51788 | 0.801693 | 7.98E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene51818 | 0.811905 | 5.54E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene52525 | 0.814093 | 1.84E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene53064 | 0.803061 | 4.17E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene53191 | 0.805002 | 1.65E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene53321 | 0.820404 | 6.98E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene53377 | 0.807259 | 5.52E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene53586 | 0.843895 | 1.06E-58 | -1.69E-46 |
| MS.gene054801 | MS.gene55218 | 0.815432 | 9.27E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene55406 | 0.818288 | 2.12E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene56748 | 0.804834 | 1.79E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene57477 | 0.814415 | 1.56E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene58608 | -0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene58992 | 0.826981 | 2.01E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene60171 | 0.809811 | 1.57E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene60903 | 0.800169 | 1.63E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene61207 | 0.810361 | 1.20E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene61522 | 0.815339 | 9.73E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene61742 | 0.814454 | 1.53E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene62843 | 0.803892 | 2.81E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene64249 | 0.85348 | 2.32E-61 | -1.69E-46 |
| MS.gene054801 | MS.gene64567 | 0.806243 | 9.04E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene65172 | 0.855188 | 7.46E-62 | -1.69E-46 |
| MS.gene054801 | MS.gene65718 | 0.80859 | 2.87E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene66682 | 0.822069 | 2.88E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene67194 | 0.808369 | 3.20E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene67738 | 0.802957 | 4.38E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene68993 | 0.800286 | 1.55E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene68999 | 0.807467 | 4.98E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene69741 | 0.824701 | 7.00E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene70534 | 0.822654 | 2.11E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene70895 | 0.820672 | 6.06E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene71203 | 0.805334 | 1.40E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene71468 | 0.804661 | 1.94E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene71704 | 0.803201 | 3.90E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene72011 | 0.810033 | 1.41E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene72268 | 0.861621 | 9.02E-64 | -1.69E-46 |
| MS.gene054801 | MS.gene72400 | 0.807771 | 4.30E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene73043 | 0.81971 | 1.01E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene73332 | 0.806965 | 6.37E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene73520 | 0.829347 | 5.42E-55 | -1.69E-46 |
| MS.gene054801 | MS.gene73522 | 0.854985 | 8.55E-62 | -1.69E-46 |
| MS.gene054801 | MS.gene73527 | 0.813938 | 1.99E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene73528 | 0.824708 | 6.97E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene73555 | 0.834285 | 3.27E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene74025 | 0.826506 | 2.61E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene74380 | 0.855303 | 6.91E-62 | -1.69E-46 |
| MS.gene054801 | MS.gene76063 | 0.806514 | 7.93E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene76389 | 0.841935 | 3.51E-58 | -1.69E-46 |
| MS.gene054801 | MS.gene76701 | 0.816196 | 6.27E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene77149 | 0.801887 | 7.28E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene77188 | 0.828357 | 9.40E-55 | -1.69E-46 |
| MS.gene054801 | MS.gene77370 | 0.827078 | 1.91E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene77781 | 0.803955 | 2.72E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene80853 | 0.842267 | 2.87E-58 | -1.69E-46 |
| MS.gene054801 | MS.gene81256 | 0.805365 | 1.38E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene81329 | 0.805831 | 1.10E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene81370 | 0.80405 | 2.60E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene81575 | 0.838725 | 2.43E-57 | -1.69E-46 |
| MS.gene054801 | MS.gene81576 | 0.815336 | 9.74E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene82321 | 0.805569 | 1.25E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene82684 | 0.814508 | 1.49E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene82685 | 0.803866 | 2.84E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene82699 | 0.818629 | 1.77E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene82793 | 0.805081 | 1.59E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene82929 | 0.810831 | 9.48E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene82962 | 0.843222 | 1.60E-58 | -1.69E-46 |
| MS.gene054801 | MS.gene83529 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene84426 | 0.805292 | 1.43E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene84454 | 0.80429 | 2.32E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene84612 | 0.816477 | 5.42E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene84803 | 0.80913 | 2.20E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene85436 | 0.806609 | 7.57E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene86086 | 0.809528 | 1.81E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene86140 | 0.808751 | 2.65E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene86333 | 0.822139 | 2.78E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene86335 | 0.839868 | 1.23E-57 | -1.69E-46 |
| MS.gene054801 | MS.gene86336 | 0.815921 | 7.21E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene86844 | 0.814818 | 1.27E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene86922 | 0.808167 | 3.54E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene88243 | 0.822681 | 2.08E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene88767 | 0.819262 | 1.27E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene89940 | 0.801171 | 1.02E-48 | -1.69E-46 |
| MS.gene054801 | MS.gene90022 | 0.820897 | 5.38E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene90335 | 0.802689 | 4.98E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene90337 | 0.80451 | 2.09E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene90525 | 0.816668 | 4.91E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene90605 | 0.811478 | 6.86E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene90617 | 0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene93764 | 0.813915 | 2.01E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene94342 | 0.811483 | 6.84E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene94929 | 0.804731 | 1.88E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene95390 | 0.815964 | 7.06E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene95624 | 0.813753 | 2.18E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene95981 | 0.803905 | 2.79E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene97022 | 0.812481 | 4.15E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene97534 | 0.805886 | 1.08E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene97797 | 0.825069 | 5.73E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene98087 | 0.830893 | 2.27E-55 | -1.69E-46 |
| MS.gene054801 | MS.gene98088 | 0.833593 | 4.88E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene98394 | 0.805717 | 1.17E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene98531 | 0.803635 | 3.17E-49 | -1.69E-46 |
| MS.gene054801 | MS.gene98774 | 0.810321 | 1.22E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene99986 | 0.812965 | 3.25E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054801.t1 | MTR_3g099580 | 96.296 | 54 | 2 | 0 | 1 | 54 | 17 | 70 | 3.25e-32 | 109 |
| MS.gene054801.t1 | MTR_3g099570 | 81.481 | 54 | 10 | 0 | 1 | 54 | 17 | 70 | 4.52e-26 | 93.6 |
| MS.gene054801.t1 | MTR_3g099680 | 76.364 | 55 | 12 | 1 | 1 | 54 | 17 | 71 | 3.19e-22 | 84.3 |
| MS.gene054801.t1 | MTR_3g099980 | 76.364 | 55 | 12 | 1 | 1 | 54 | 17 | 71 | 9.84e-22 | 83.2 |
| MS.gene054801.t1 | MTR_3g099540 | 73.077 | 52 | 14 | 0 | 1 | 52 | 18 | 69 | 1.33e-21 | 80.9 |
| MS.gene054801.t1 | MTR_8g007035 | 60.000 | 55 | 21 | 1 | 1 | 54 | 14 | 68 | 1.18e-15 | 67.0 |
| MS.gene054801.t1 | MTR_8g007020 | 58.182 | 55 | 22 | 1 | 1 | 54 | 14 | 68 | 2.84e-14 | 63.2 |
| MS.gene054801.t1 | MTR_1g090190 | 50.000 | 48 | 24 | 0 | 7 | 54 | 20 | 67 | 4.16e-12 | 57.4 |
| MS.gene054801.t1 | MTR_7g086140 | 56.250 | 48 | 20 | 1 | 6 | 52 | 22 | 69 | 3.04e-11 | 54.7 |
| MS.gene054801.t1 | MTR_7g086190 | 56.250 | 48 | 20 | 1 | 6 | 52 | 22 | 69 | 3.04e-11 | 54.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054801.t1 | AT1G72230 | 67.568 | 37 | 12 | 0 | 18 | 54 | 31 | 67 | 9.19e-14 | 61.6 |
| MS.gene054801.t1 | AT1G22480 | 64.865 | 37 | 13 | 0 | 18 | 54 | 27 | 63 | 8.98e-13 | 58.9 |
| MS.gene054801.t1 | AT2G32300 | 54.902 | 51 | 22 | 1 | 5 | 54 | 21 | 71 | 2.73e-12 | 58.9 |
| MS.gene054801.t1 | AT2G32300 | 54.902 | 51 | 22 | 1 | 5 | 54 | 51 | 101 | 3.86e-12 | 58.5 |
| MS.gene054801.t1 | AT3G60270 | 48.980 | 49 | 25 | 0 | 6 | 54 | 22 | 70 | 7.74e-11 | 54.3 |
Find 17 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAATCAGGTTGGGCAAT+TGG | 0.365257 | 3.3:-79502232 | MS.gene054801:CDS |
| CTATGGACAGTGTTCAACTA+TGG | 0.366108 | 3.3:-79501991 | MS.gene054801:intron |
| CACACCGTTGGAGATAAATC+AGG | 0.494660 | 3.3:-79502244 | MS.gene054801:CDS |
| GGCTAGTGACAAAACATTTG+CGG | 0.495560 | 3.3:-79502191 | MS.gene054801:CDS |
| TTTGCGGTTGGTGACAGTCT+TGG | 0.500707 | 3.3:-79502175 | MS.gene054801:intron |
| CGTTGGAGATAAATCAGGTT+GGG | 0.514147 | 3.3:-79502239 | MS.gene054801:CDS |
| CTTGCAACTGTCCACACCGT+TGG | 0.529565 | 3.3:-79502256 | MS.gene054801:CDS |
| CCAACCTGATTTATCTCCAA+CGG | 0.588831 | 3.3:+79502240 | None:intergenic |
| GTGTGGACAGTTGCAAGAGT+TGG | 0.591396 | 3.3:+79502262 | None:intergenic |
| AGTGACAAAACATTTGCGGT+TGG | 0.594495 | 3.3:-79502187 | MS.gene054801:CDS |
| CTTTAACTTCATCCACTGTG+TGG | 0.606822 | 3.3:+79501962 | None:intergenic |
| TTGGTTCTGATTATAACACA+TGG | 0.617869 | 3.3:-79502213 | MS.gene054801:CDS |
| ACAGTGTTCAACTATGGTGC+TGG | 0.627539 | 3.3:-79501985 | MS.gene054801:intron |
| CCGTTGGAGATAAATCAGGT+TGG | 0.633245 | 3.3:-79502240 | MS.gene054801:CDS |
| TGGTTCTGATTATAACACAT+GGG | 0.658992 | 3.3:-79502212 | MS.gene054801:CDS |
| CTGATTTATCTCCAACGGTG+TGG | 0.663800 | 3.3:+79502245 | None:intergenic |
| CTATGGTGCTGGCCACACAG+TGG | 0.772990 | 3.3:-79501974 | MS.gene054801:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATATATAACTTTACTA+TGG | - | chr3.3:79502222-79502241 | MS.gene054801:CDS | 10.0% |
| !! | TATATTAGATTTGTAAATTG+TGG | + | chr3.3:79502209-79502228 | None:intergenic | 15.0% |
| !! | TGGTTCTGATTATAACACAT+GGG | - | chr3.3:79502018-79502037 | MS.gene054801:intron | 30.0% |
| !! | TTGGTTCTGATTATAACACA+TGG | - | chr3.3:79502017-79502036 | MS.gene054801:intron | 30.0% |
| AGTGACAAAACATTTGCGGT+TGG | - | chr3.3:79502043-79502062 | MS.gene054801:intron | 40.0% | |
| CCAACCTGATTTATCTCCAA+CGG | + | chr3.3:79501993-79502012 | None:intergenic | 40.0% | |
| CGTTGGAGATAAATCAGGTT+GGG | - | chr3.3:79501991-79502010 | MS.gene054801:intron | 40.0% | |
| CTATGGACAGTGTTCAACTA+TGG | - | chr3.3:79502239-79502258 | MS.gene054801:CDS | 40.0% | |
| GGCTAGTGACAAAACATTTG+CGG | - | chr3.3:79502039-79502058 | MS.gene054801:intron | 40.0% | |
| ! | CTTTAACTTCATCCACTGTG+TGG | + | chr3.3:79502271-79502290 | None:intergenic | 40.0% |
| !! | GATAAATCAGGTTGGGCAAT+TGG | - | chr3.3:79501998-79502017 | MS.gene054801:intron | 40.0% |
| ACAGTGTTCAACTATGGTGC+TGG | - | chr3.3:79502245-79502264 | MS.gene054801:CDS | 45.0% | |
| CACACCGTTGGAGATAAATC+AGG | - | chr3.3:79501986-79502005 | MS.gene054801:intron | 45.0% | |
| CCGTTGGAGATAAATCAGGT+TGG | - | chr3.3:79501990-79502009 | MS.gene054801:intron | 45.0% | |
| CTGATTTATCTCCAACGGTG+TGG | + | chr3.3:79501988-79502007 | None:intergenic | 45.0% | |
| GTGTGGACAGTTGCAAGAGT+TGG | + | chr3.3:79501971-79501990 | None:intergenic | 50.0% | |
| !! | TTTGCGGTTGGTGACAGTCT+TGG | - | chr3.3:79502055-79502074 | MS.gene054801:intron | 50.0% |
| CTTGCAACTGTCCACACCGT+TGG | - | chr3.3:79501974-79501993 | MS.gene054801:CDS | 55.0% | |
| !! | CTATGGTGCTGGCCACACAG+TGG | - | chr3.3:79502256-79502275 | MS.gene054801:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79501959 | 79502293 | 79501959 | ID=MS.gene054801 |
| chr3.3 | mRNA | 79501959 | 79502293 | 79501959 | ID=MS.gene054801.t1;Parent=MS.gene054801 |
| chr3.3 | exon | 79502176 | 79502293 | 79502176 | ID=MS.gene054801.t1.exon1;Parent=MS.gene054801.t1 |
| chr3.3 | CDS | 79502176 | 79502293 | 79502176 | ID=cds.MS.gene054801.t1;Parent=MS.gene054801.t1 |
| chr3.3 | exon | 79501959 | 79502003 | 79501959 | ID=MS.gene054801.t1.exon2;Parent=MS.gene054801.t1 |
| chr3.3 | CDS | 79501959 | 79502003 | 79501959 | ID=cds.MS.gene054801.t1;Parent=MS.gene054801.t1 |
| Gene Sequence |
| Protein sequence |
