Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95515.t1 | XP_013442640.1 | 67.5 | 231 | 34 | 1 | 1 | 190 | 1 | 231 | 7.10E-76 | 293.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95515.t1 | Q9FKK2 | 38.4 | 190 | 65 | 5 | 5 | 149 | 3 | 185 | 4.7e-20 | 99.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95515.t1 | A0A072TSY1 | 67.5 | 231 | 34 | 1 | 1 | 190 | 1 | 231 | 5.1e-76 | 293.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene95515.t1 | TF | MADS-M-type |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene95515 | MS.gene22094 | PPI |
MS.gene95515 | MS.gene068836 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95515.t1 | MTR_0121s0080 | 67.532 | 231 | 34 | 1 | 1 | 190 | 1 | 231 | 1.06e-104 | 300 |
MS.gene95515.t1 | MTR_7g062350 | 65.385 | 208 | 31 | 1 | 24 | 190 | 36 | 243 | 1.08e-88 | 260 |
MS.gene95515.t1 | MTR_8g043650 | 59.052 | 232 | 53 | 2 | 1 | 190 | 1 | 232 | 1.10e-87 | 258 |
MS.gene95515.t1 | MTR_2g030740 | 58.108 | 222 | 52 | 1 | 1 | 181 | 1 | 222 | 1.87e-81 | 242 |
MS.gene95515.t1 | MTR_1g105910 | 56.444 | 225 | 57 | 1 | 1 | 184 | 1 | 225 | 5.94e-81 | 240 |
MS.gene95515.t1 | MTR_1g012570 | 56.757 | 222 | 55 | 1 | 1 | 181 | 1 | 222 | 1.87e-80 | 239 |
MS.gene95515.t1 | MTR_1g105920 | 57.078 | 219 | 53 | 1 | 1 | 178 | 1 | 219 | 4.20e-80 | 238 |
MS.gene95515.t1 | MTR_3g052920 | 55.708 | 219 | 56 | 1 | 1 | 178 | 1 | 219 | 7.81e-77 | 230 |
MS.gene95515.t1 | MTR_1g108510 | 53.617 | 235 | 50 | 4 | 1 | 184 | 1 | 227 | 2.06e-74 | 223 |
MS.gene95515.t1 | MTR_3g030770 | 53.617 | 235 | 50 | 4 | 1 | 184 | 1 | 227 | 3.92e-73 | 220 |
MS.gene95515.t1 | MTR_2g093190 | 54.468 | 235 | 48 | 4 | 1 | 184 | 1 | 227 | 5.15e-73 | 220 |
MS.gene95515.t1 | MTR_1g108580 | 54.237 | 236 | 47 | 4 | 1 | 184 | 1 | 227 | 1.12e-72 | 219 |
MS.gene95515.t1 | MTR_5g053390 | 52.000 | 225 | 67 | 1 | 1 | 184 | 1 | 225 | 2.63e-72 | 218 |
MS.gene95515.t1 | MTR_1g077360 | 50.667 | 225 | 70 | 1 | 1 | 184 | 1 | 225 | 8.64e-70 | 212 |
MS.gene95515.t1 | MTR_1g075600 | 49.778 | 225 | 72 | 1 | 1 | 184 | 1 | 225 | 1.46e-69 | 211 |
MS.gene95515.t1 | MTR_2g085280 | 49.138 | 232 | 76 | 3 | 1 | 190 | 1 | 232 | 7.49e-69 | 209 |
MS.gene95515.t1 | MTR_1g105905 | 52.558 | 215 | 60 | 2 | 18 | 190 | 1 | 215 | 1.99e-68 | 208 |
MS.gene95515.t1 | MTR_2g085250 | 49.138 | 232 | 76 | 3 | 1 | 190 | 1 | 232 | 2.48e-68 | 208 |
MS.gene95515.t1 | MTR_5g055100 | 48.305 | 236 | 77 | 3 | 1 | 191 | 1 | 236 | 1.95e-67 | 206 |
MS.gene95515.t1 | MTR_5g045560 | 48.444 | 225 | 75 | 2 | 1 | 184 | 1 | 225 | 2.87e-64 | 198 |
MS.gene95515.t1 | MTR_1g106070 | 53.297 | 182 | 44 | 1 | 1 | 141 | 1 | 182 | 3.35e-59 | 183 |
MS.gene95515.t1 | MTR_3g052870 | 49.099 | 222 | 53 | 3 | 1 | 181 | 1 | 203 | 3.87e-57 | 179 |
MS.gene95515.t1 | MTR_3g030780 | 56.818 | 132 | 16 | 1 | 1 | 91 | 1 | 132 | 4.35e-39 | 130 |
MS.gene95515.t1 | MTR_1g075570 | 48.171 | 164 | 58 | 1 | 18 | 154 | 1 | 164 | 8.92e-38 | 128 |
MS.gene95515.t1 | MTR_0121s0100 | 48.485 | 132 | 27 | 1 | 1 | 91 | 1 | 132 | 4.19e-29 | 105 |
MS.gene95515.t1 | MTR_3g080940 | 36.184 | 152 | 56 | 1 | 9 | 119 | 9 | 160 | 2.36e-24 | 95.1 |
MS.gene95515.t1 | MTR_1g108500 | 66.667 | 75 | 5 | 1 | 22 | 76 | 110 | 184 | 2.03e-22 | 92.4 |
MS.gene95515.t1 | MTR_2g105290 | 36.478 | 159 | 64 | 3 | 5 | 126 | 8 | 166 | 2.61e-22 | 89.0 |
MS.gene95515.t1 | MTR_8g086290 | 36.905 | 168 | 69 | 4 | 5 | 135 | 8 | 175 | 7.92e-22 | 87.8 |
MS.gene95515.t1 | MTR_3g067875 | 72.727 | 44 | 12 | 0 | 18 | 61 | 1 | 44 | 1.12e-16 | 71.2 |
MS.gene95515.t1 | MTR_7g028448 | 39.683 | 126 | 47 | 5 | 22 | 118 | 25 | 150 | 8.76e-15 | 68.9 |
MS.gene95515.t1 | MTR_4g036915 | 39.683 | 126 | 47 | 5 | 22 | 118 | 25 | 150 | 8.76e-15 | 68.9 |
MS.gene95515.t1 | MTR_4g084740 | 45.000 | 80 | 35 | 2 | 9 | 79 | 2 | 81 | 1.39e-14 | 70.9 |
MS.gene95515.t1 | MTR_4g093970 | 59.615 | 52 | 21 | 0 | 10 | 61 | 29 | 80 | 7.72e-14 | 67.8 |
MS.gene95515.t1 | MTR_2g461710 | 56.604 | 53 | 23 | 0 | 9 | 61 | 2 | 54 | 9.64e-14 | 63.5 |
MS.gene95515.t1 | MTR_1g054265 | 57.143 | 49 | 21 | 0 | 9 | 57 | 2 | 50 | 1.08e-13 | 66.2 |
MS.gene95515.t1 | MTR_4g102530 | 40.909 | 110 | 61 | 3 | 10 | 115 | 3 | 112 | 2.13e-13 | 66.2 |
MS.gene95515.t1 | MTR_1g047550 | 53.846 | 52 | 24 | 0 | 9 | 60 | 2 | 53 | 2.47e-13 | 65.5 |
MS.gene95515.t1 | MTR_8g079502 | 53.846 | 52 | 24 | 0 | 9 | 60 | 2 | 53 | 3.17e-13 | 65.1 |
MS.gene95515.t1 | MTR_4g131030 | 57.143 | 49 | 21 | 0 | 9 | 57 | 2 | 50 | 4.12e-13 | 65.5 |
MS.gene95515.t1 | MTR_3g067870 | 63.043 | 46 | 17 | 0 | 16 | 61 | 83 | 128 | 5.96e-13 | 63.9 |
MS.gene95515.t1 | MTR_3g452380 | 54.237 | 59 | 27 | 0 | 3 | 61 | 11 | 69 | 1.11e-12 | 64.7 |
MS.gene95515.t1 | MTR_3g102570 | 60.000 | 50 | 20 | 0 | 9 | 58 | 2 | 51 | 1.13e-12 | 65.5 |
MS.gene95515.t1 | MTR_5g032150 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 1.31e-12 | 64.3 |
MS.gene95515.t1 | MTR_5g032520 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 1.40e-12 | 64.3 |
MS.gene95515.t1 | MTR_5g066960 | 47.170 | 53 | 28 | 0 | 9 | 61 | 2 | 54 | 3.08e-12 | 59.7 |
MS.gene95515.t1 | MTR_5g066180 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 3.84e-12 | 63.2 |
MS.gene95515.t1 | MTR_4g127140 | 63.158 | 57 | 21 | 0 | 5 | 61 | 8 | 64 | 4.00e-12 | 62.4 |
MS.gene95515.t1 | MTR_1g063160 | 51.020 | 49 | 24 | 0 | 9 | 57 | 2 | 50 | 4.33e-12 | 62.0 |
MS.gene95515.t1 | MTR_4g109830 | 54.545 | 55 | 23 | 1 | 7 | 61 | 2 | 54 | 4.71e-12 | 62.8 |
MS.gene95515.t1 | MTR_1g053070 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 5.58e-12 | 62.8 |
MS.gene95515.t1 | MTR_1g038300 | 51.852 | 54 | 26 | 0 | 9 | 62 | 2 | 55 | 5.64e-12 | 62.8 |
MS.gene95515.t1 | MTR_3g005530 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 5.67e-12 | 62.4 |
MS.gene95515.t1 | MTR_6g464720 | 49.254 | 67 | 28 | 2 | 7 | 73 | 2 | 62 | 6.35e-12 | 62.8 |
MS.gene95515.t1 | MTR_8g051580 | 51.923 | 52 | 25 | 0 | 9 | 60 | 2 | 53 | 6.41e-12 | 61.6 |
MS.gene95515.t1 | MTR_5g046790 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 7.29e-12 | 62.0 |
MS.gene95515.t1 | MTR_2g017865 | 54.717 | 53 | 24 | 0 | 9 | 61 | 17 | 69 | 8.16e-12 | 62.4 |
MS.gene95515.t1 | MTR_8g033270 | 54.545 | 55 | 23 | 1 | 7 | 61 | 2 | 54 | 1.03e-11 | 62.0 |
MS.gene95515.t1 | MTR_8g066260 | 52.830 | 53 | 25 | 0 | 9 | 61 | 2 | 54 | 1.04e-11 | 62.0 |
MS.gene95515.t1 | MTR_8g033220 | 32.836 | 134 | 60 | 4 | 10 | 113 | 3 | 136 | 1.05e-11 | 62.0 |
MS.gene95515.t1 | MTR_0003s0590 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 1.18e-11 | 62.0 |
MS.gene95515.t1 | MTR_8g033220 | 32.836 | 134 | 60 | 4 | 10 | 113 | 3 | 136 | 1.19e-11 | 61.6 |
MS.gene95515.t1 | MTR_8g087860 | 54.717 | 53 | 24 | 0 | 9 | 61 | 18 | 70 | 1.20e-11 | 62.0 |
MS.gene95515.t1 | MTR_7g075850 | 50.000 | 54 | 27 | 0 | 9 | 62 | 2 | 55 | 1.30e-11 | 62.0 |
MS.gene95515.t1 | MTR_1g029670 | 49.057 | 53 | 27 | 0 | 9 | 61 | 2 | 54 | 1.46e-11 | 60.8 |
MS.gene95515.t1 | MTR_5g046870 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 1.65e-11 | 58.9 |
MS.gene95515.t1 | MTR_7g016600 | 52.727 | 55 | 24 | 1 | 7 | 61 | 2 | 54 | 1.88e-11 | 61.6 |
MS.gene95515.t1 | MTR_3g084980 | 52.830 | 53 | 25 | 0 | 9 | 61 | 2 | 54 | 1.94e-11 | 61.2 |
MS.gene95515.t1 | MTR_7g075870 | 53.846 | 52 | 24 | 0 | 10 | 61 | 3 | 54 | 2.32e-11 | 60.8 |
MS.gene95515.t1 | MTR_7g075870 | 53.846 | 52 | 24 | 0 | 10 | 61 | 3 | 54 | 2.47e-11 | 60.5 |
MS.gene95515.t1 | MTR_3g088615 | 48.148 | 54 | 28 | 0 | 9 | 62 | 2 | 55 | 2.98e-11 | 59.7 |
MS.gene95515.t1 | MTR_3g113030 | 49.057 | 53 | 27 | 0 | 9 | 61 | 2 | 54 | 3.10e-11 | 60.5 |
MS.gene95515.t1 | MTR_4g109810 | 49.057 | 53 | 27 | 0 | 9 | 61 | 2 | 54 | 3.54e-11 | 60.5 |
MS.gene95515.t1 | MTR_6g015975 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.66e-11 | 60.5 |
MS.gene95515.t1 | MTR_8g046350 | 51.923 | 52 | 25 | 0 | 9 | 60 | 2 | 53 | 4.25e-11 | 58.9 |
MS.gene95515.t1 | MTR_8g097090 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 4.32e-11 | 60.5 |
MS.gene95515.t1 | MTR_5g021270 | 50.000 | 54 | 27 | 0 | 9 | 62 | 2 | 55 | 4.40e-11 | 60.1 |
MS.gene95515.t1 | MTR_5g021270 | 50.000 | 54 | 27 | 0 | 9 | 62 | 2 | 55 | 4.58e-11 | 60.1 |
MS.gene95515.t1 | MTR_1g101970 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 8.48e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95515.t1 | AT5G60440 | 39.130 | 184 | 62 | 6 | 5 | 143 | 3 | 181 | 7.05e-26 | 101 |
MS.gene95515.t1 | AT2G24840 | 34.615 | 156 | 60 | 2 | 9 | 122 | 63 | 218 | 5.05e-21 | 87.8 |
MS.gene95515.t1 | AT1G65360 | 33.511 | 188 | 79 | 7 | 5 | 151 | 3 | 185 | 1.21e-20 | 85.9 |
MS.gene95515.t1 | AT1G01530 | 66.667 | 57 | 19 | 0 | 4 | 60 | 2 | 58 | 5.63e-20 | 84.7 |
MS.gene95515.t1 | AT4G36590 | 66.667 | 57 | 19 | 0 | 5 | 61 | 3 | 59 | 1.12e-19 | 84.0 |
MS.gene95515.t1 | AT1G22130 | 54.545 | 55 | 25 | 0 | 9 | 63 | 2 | 56 | 8.35e-15 | 71.6 |
MS.gene95515.t1 | AT1G77980 | 54.545 | 55 | 25 | 0 | 9 | 63 | 2 | 56 | 9.51e-15 | 71.6 |
MS.gene95515.t1 | AT3G04100 | 47.458 | 59 | 31 | 0 | 2 | 60 | 7 | 65 | 3.74e-14 | 68.2 |
MS.gene95515.t1 | AT3G54340 | 34.127 | 126 | 72 | 3 | 9 | 131 | 2 | 119 | 2.24e-13 | 66.6 |
MS.gene95515.t1 | AT1G77950 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.64e-13 | 66.6 |
MS.gene95515.t1 | AT1G77950 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.64e-13 | 66.6 |
MS.gene95515.t1 | AT1G77950 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.64e-13 | 66.6 |
MS.gene95515.t1 | AT1G77950 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.64e-13 | 66.6 |
MS.gene95515.t1 | AT2G22540 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 3.12e-13 | 66.2 |
MS.gene95515.t1 | AT2G22540 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 4.53e-13 | 65.9 |
MS.gene95515.t1 | AT2G22540 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 4.53e-13 | 65.9 |
MS.gene95515.t1 | AT3G66656 | 55.769 | 52 | 23 | 0 | 9 | 60 | 2 | 53 | 5.34e-13 | 64.7 |
MS.gene95515.t1 | AT4G22950 | 57.692 | 52 | 22 | 0 | 10 | 61 | 3 | 54 | 1.23e-12 | 63.5 |
MS.gene95515.t1 | AT1G72350 | 52.830 | 53 | 25 | 0 | 9 | 61 | 43 | 95 | 1.28e-12 | 64.3 |
MS.gene95515.t1 | AT5G13790 | 58.491 | 53 | 22 | 0 | 9 | 61 | 2 | 54 | 1.43e-12 | 64.7 |
MS.gene95515.t1 | AT5G13790 | 58.491 | 53 | 22 | 0 | 9 | 61 | 2 | 54 | 1.46e-12 | 64.7 |
MS.gene95515.t1 | AT4G22950 | 57.692 | 52 | 22 | 0 | 10 | 61 | 3 | 54 | 2.25e-12 | 63.5 |
MS.gene95515.t1 | AT4G22950 | 57.692 | 52 | 22 | 0 | 10 | 61 | 3 | 54 | 2.25e-12 | 63.5 |
MS.gene95515.t1 | AT4G24540 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 2.60e-12 | 63.5 |
MS.gene95515.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 3 | 55 | 2.61e-12 | 62.8 |
MS.gene95515.t1 | AT4G09960 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 3.78e-12 | 63.2 |
MS.gene95515.t1 | AT2G34440 | 53.061 | 49 | 23 | 0 | 9 | 57 | 2 | 50 | 4.10e-12 | 62.0 |
MS.gene95515.t1 | AT4G09960 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 4.36e-12 | 63.2 |
MS.gene95515.t1 | AT4G09960 | 54.717 | 53 | 24 | 0 | 9 | 61 | 3 | 55 | 4.41e-12 | 63.2 |
MS.gene95515.t1 | AT5G23260 | 50.794 | 63 | 29 | 1 | 2 | 62 | 9 | 71 | 4.42e-12 | 63.5 |
MS.gene95515.t1 | AT5G23260 | 50.794 | 63 | 29 | 1 | 2 | 62 | 9 | 71 | 4.47e-12 | 63.5 |
MS.gene95515.t1 | AT4G11880 | 55.769 | 52 | 23 | 0 | 10 | 61 | 3 | 54 | 4.82e-12 | 62.0 |
MS.gene95515.t1 | AT4G11880 | 55.769 | 52 | 23 | 0 | 10 | 61 | 3 | 54 | 4.82e-12 | 62.0 |
MS.gene95515.t1 | AT2G45650 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 5.03e-12 | 63.2 |
MS.gene95515.t1 | AT4G09960 | 54.717 | 53 | 24 | 0 | 9 | 61 | 12 | 64 | 5.12e-12 | 62.8 |
MS.gene95515.t1 | AT1G69120 | 56.364 | 55 | 22 | 1 | 7 | 61 | 2 | 54 | 5.25e-12 | 62.8 |
MS.gene95515.t1 | AT2G42830 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 5.34e-12 | 63.2 |
MS.gene95515.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 3 | 55 | 5.39e-12 | 62.4 |
MS.gene95515.t1 | AT5G23260 | 48.438 | 64 | 33 | 0 | 9 | 72 | 2 | 65 | 5.65e-12 | 62.8 |
MS.gene95515.t1 | AT2G42830 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 5.67e-12 | 62.8 |
MS.gene95515.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 5.95e-12 | 62.8 |
MS.gene95515.t1 | AT4G18960 | 51.667 | 60 | 29 | 0 | 2 | 61 | 11 | 70 | 6.26e-12 | 62.8 |
MS.gene95515.t1 | AT5G23260 | 53.704 | 54 | 25 | 0 | 9 | 62 | 2 | 55 | 6.58e-12 | 62.8 |
MS.gene95515.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 6.93e-12 | 62.8 |
MS.gene95515.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 26 | 78 | 7.17e-12 | 62.0 |
MS.gene95515.t1 | AT4G09960 | 54.386 | 57 | 24 | 1 | 5 | 61 | 26 | 80 | 7.18e-12 | 62.8 |
MS.gene95515.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 7.34e-12 | 62.8 |
MS.gene95515.t1 | AT5G10140 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 7.41e-12 | 61.6 |
MS.gene95515.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 18 | 75 | 7.48e-12 | 62.8 |
MS.gene95515.t1 | AT5G60910 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 7.50e-12 | 62.4 |
MS.gene95515.t1 | AT5G10140 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 7.81e-12 | 61.2 |
MS.gene95515.t1 | AT1G26310 | 54.545 | 55 | 23 | 1 | 7 | 61 | 2 | 54 | 7.93e-12 | 62.8 |
MS.gene95515.t1 | AT5G10140 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 8.14e-12 | 61.6 |
MS.gene95515.t1 | AT4G11880 | 55.769 | 52 | 23 | 0 | 10 | 61 | 3 | 54 | 8.42e-12 | 62.0 |
MS.gene95515.t1 | AT4G11880 | 55.769 | 52 | 23 | 0 | 10 | 61 | 3 | 54 | 8.42e-12 | 62.0 |
MS.gene95515.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 13 | 65 | 8.71e-12 | 62.0 |
MS.gene95515.t1 | AT3G58780 | 53.333 | 60 | 26 | 1 | 2 | 61 | 12 | 69 | 9.11e-12 | 62.8 |
MS.gene95515.t1 | AT5G51870 | 58.491 | 53 | 22 | 0 | 10 | 62 | 3 | 55 | 9.27e-12 | 62.0 |
MS.gene95515.t1 | AT1G69120 | 56.364 | 55 | 22 | 1 | 7 | 61 | 2 | 54 | 1.02e-11 | 62.4 |
MS.gene95515.t1 | AT3G30260 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 1.19e-11 | 62.0 |
MS.gene95515.t1 | AT4G09960 | 54.386 | 57 | 24 | 1 | 5 | 61 | 95 | 149 | 1.29e-11 | 62.4 |
MS.gene95515.t1 | AT5G10140 | 54.717 | 53 | 24 | 0 | 9 | 61 | 2 | 54 | 1.53e-11 | 60.8 |
MS.gene95515.t1 | AT3G57390 | 52.830 | 53 | 25 | 0 | 9 | 61 | 2 | 54 | 2.08e-11 | 61.2 |
MS.gene95515.t1 | AT5G15800 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.60e-11 | 61.2 |
MS.gene95515.t1 | AT2G03710 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 2.73e-11 | 60.1 |
MS.gene95515.t1 | AT1G24260 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.01e-11 | 60.8 |
MS.gene95515.t1 | AT1G24260 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.47e-11 | 60.8 |
MS.gene95515.t1 | AT1G24260 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.64e-11 | 60.8 |
MS.gene95515.t1 | AT5G62165 | 37.647 | 85 | 43 | 1 | 10 | 84 | 3 | 87 | 3.68e-11 | 58.2 |
MS.gene95515.t1 | AT3G57390 | 52.830 | 53 | 25 | 0 | 9 | 61 | 2 | 54 | 3.88e-11 | 60.8 |
MS.gene95515.t1 | AT2G03710 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 3.95e-11 | 60.8 |
MS.gene95515.t1 | AT5G20240 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 4.01e-11 | 58.9 |
MS.gene95515.t1 | AT2G03710 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 4.14e-11 | 60.5 |
MS.gene95515.t1 | AT5G15800 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 4.32e-11 | 60.5 |
MS.gene95515.t1 | AT2G45660 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 4.46e-11 | 58.9 |
MS.gene95515.t1 | AT3G02310 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 5.59e-11 | 60.1 |
MS.gene95515.t1 | AT3G02310 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 6.50e-11 | 59.3 |
MS.gene95515.t1 | AT3G57230 | 47.170 | 53 | 28 | 0 | 9 | 61 | 2 | 54 | 6.77e-11 | 58.2 |
MS.gene95515.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95515.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95515.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95515.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95515.t1 | AT5G62165 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 7.71e-11 | 58.2 |
MS.gene95515.t1 | AT5G20240 | 50.943 | 53 | 26 | 0 | 9 | 61 | 2 | 54 | 7.98e-11 | 59.3 |
MS.gene95515.t1 | AT2G45660 | 51.923 | 52 | 25 | 0 | 10 | 61 | 3 | 54 | 9.21e-11 | 59.3 |
Find 44 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAATTGGCTTCAACAATA+TGG | 0.202381 | 3.4:-24329790 | MS.gene95515:CDS |
TGAATTATTCAAGAAGATTT+TGG | 0.235888 | 3.4:-24330000 | MS.gene95515:CDS |
ATCTCAGTTTGTTGAGGATT+TGG | 0.255732 | 3.4:+24329855 | None:intergenic |
ATGTTGCAACCTCATTTAAT+TGG | 0.256996 | 3.4:-24329804 | MS.gene95515:CDS |
TGTTGATAGGAGTGCAATTC+AGG | 0.259070 | 3.4:-24329949 | MS.gene95515:CDS |
TGGTGGGCTTGTCCGATTAA+TGG | 0.300675 | 3.4:-24330041 | MS.gene95515:CDS |
AGCGTCGTAGTGGGCTCTTC+AGG | 0.306350 | 3.4:-24331576 | MS.gene95515:CDS |
AGGCGTTCAAGGCTCAATTT+TGG | 0.334747 | 3.4:-24330061 | MS.gene95515:CDS |
GGTGGGCTTGTCCGATTAAT+GGG | 0.369852 | 3.4:-24330040 | MS.gene95515:CDS |
AATATGGGAGGAGGAGGATA+TGG | 0.370544 | 3.4:-24329774 | MS.gene95515:CDS |
GTCCGATTAATGGGATGAAT+AGG | 0.377904 | 3.4:-24330031 | MS.gene95515:CDS |
GTTGAGGATTTGGCTGATAA+TGG | 0.382243 | 3.4:+24329865 | None:intergenic |
TTAATTGGCTTCAACAATAT+GGG | 0.383325 | 3.4:-24329789 | MS.gene95515:CDS |
TTGTTGCTCATCATGTTGAT+AGG | 0.402553 | 3.4:-24329962 | MS.gene95515:CDS |
TCCGATTAATGGGATGAATA+GGG | 0.426477 | 3.4:-24330030 | MS.gene95515:CDS |
ATTAAATGAGGTTGCAACAT+AGG | 0.428043 | 3.4:+24329807 | None:intergenic |
GCCCTATTCATCCCATTAAT+CGG | 0.434362 | 3.4:+24330029 | None:intergenic |
ATAATGGAGAGGGATGTTAG+AGG | 0.448969 | 3.4:+24329881 | None:intergenic |
ATAGGGTTATGTAAAATTTG+TGG | 0.488073 | 3.4:+24329825 | None:intergenic |
TTAAATGAGGTTGCAACATA+GGG | 0.493554 | 3.4:+24329808 | None:intergenic |
ACCTTTCCTTCCGCTTGACA+TGG | 0.495891 | 3.4:+24331666 | None:intergenic |
AGCAACATCTACACCACAAA+GGG | 0.498436 | 3.4:+24331534 | None:intergenic |
TGTATTCTCACCTAGTGAAA+AGG | 0.518205 | 3.4:-24331506 | MS.gene95515:intron |
GTTGATAGGAGTGCAATTCA+GGG | 0.537321 | 3.4:-24329948 | MS.gene95515:CDS |
TTCAACAATATGGGAGGAGG+AGG | 0.541923 | 3.4:-24329780 | MS.gene95515:CDS |
GCTTTGAGAAAGTCACTTGG+AGG | 0.544594 | 3.4:+24331596 | None:intergenic |
TTGTTGAAGCCAATTAAATG+AGG | 0.551491 | 3.4:+24329795 | None:intergenic |
AATCAACAACACACCGGATG+AGG | 0.554114 | 3.4:-24330120 | MS.gene95515:CDS |
GAAAACATCTCAGTTTGTTG+AGG | 0.554882 | 3.4:+24329849 | None:intergenic |
GGCTTCAACAATATGGGAGG+AGG | 0.561767 | 3.4:-24329783 | MS.gene95515:CDS |
CCGGATGAGGAGGAAAATCA+TGG | 0.584209 | 3.4:-24330107 | MS.gene95515:CDS |
CTTTCTCAAAGCGTCGTAGT+GGG | 0.584950 | 3.4:-24331585 | MS.gene95515:CDS |
ACCATGTCAAGCGGAAGGAA+AGG | 0.588345 | 3.4:-24331667 | MS.gene95515:CDS |
ACTTTCTCAAAGCGTCGTAG+TGG | 0.602122 | 3.4:-24331586 | MS.gene95515:CDS |
CAACAACACACCGGATGAGG+AGG | 0.602372 | 3.4:-24330117 | MS.gene95515:CDS |
ATTGGCTTCAACAATATGGG+AGG | 0.605743 | 3.4:-24329786 | MS.gene95515:CDS |
GACGCTTTGAGAAAGTCACT+TGG | 0.608413 | 3.4:+24331593 | None:intergenic |
TGTACTTCAACCATGTCAAG+CGG | 0.628063 | 3.4:-24331676 | None:intergenic |
CTTCAACCATGTCAAGCGGA+AGG | 0.628927 | 3.4:-24331672 | None:intergenic |
TCAAGCGGAAGGAAAGGTCG+TGG | 0.632671 | 3.4:-24331661 | MS.gene95515:CDS |
GGATTTGGCTGATAATGGAG+AGG | 0.633381 | 3.4:+24329870 | None:intergenic |
GAGCAACATCTACACCACAA+AGG | 0.657703 | 3.4:+24331533 | None:intergenic |
GATTTGGCTGATAATGGAGA+GGG | 0.685158 | 3.4:+24329871 | None:intergenic |
GATTCAAATCAACAACACAC+CGG | 0.728877 | 3.4:-24330126 | MS.gene95515:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAAAAACAATAATAATAAA+GGG | + | chr3.4:24331103-24331122 | None:intergenic | 10.0% |
!! | TTAAAGTAAAATATTCTAAA+AGG | + | chr3.4:24330142-24330161 | None:intergenic | 10.0% |
!! | ATAATACTTGAAATAAACAA+AGG | + | chr3.4:24330486-24330505 | None:intergenic | 15.0% |
!! | GGTAAAAACAATAATAATAA+AGG | + | chr3.4:24331104-24331123 | None:intergenic | 15.0% |
!!! | ATTGTCTTTTATGTTATTTT+AGG | - | chr3.4:24330162-24330181 | MS.gene95515:intron | 15.0% |
!!! | TTATTTTAGGAATGAATATA+TGG | - | chr3.4:24330175-24330194 | MS.gene95515:intron | 15.0% |
!! | AAATCATTACCAACAAAAAA+TGG | + | chr3.4:24331528-24331547 | None:intergenic | 20.0% |
!! | TAAATTGCAAAGAAAGTAAA+AGG | + | chr3.4:24330530-24330549 | None:intergenic | 20.0% |
!! | TGAATCTAGATTAGAAATTA+GGG | + | chr3.4:24330688-24330707 | None:intergenic | 20.0% |
!!! | AACTTTTAATGAATGATTAG+AGG | + | chr3.4:24331162-24331181 | None:intergenic | 20.0% |
!!! | TGAATTATTCAAGAAGATTT+TGG | - | chr3.4:24331431-24331450 | MS.gene95515:intron | 20.0% |
! | AACCATGAAATTAGAAGTTT+AGG | - | chr3.4:24331028-24331047 | MS.gene95515:intron | 25.0% |
! | AACCTAAACTTCTAATTTCA+TGG | + | chr3.4:24331033-24331052 | None:intergenic | 25.0% |
! | ATAGGGTTATGTAAAATTTG+TGG | + | chr3.4:24331609-24331628 | None:intergenic | 25.0% |
! | CTTGAAATAAACAAAGGTAA+AGG | + | chr3.4:24330480-24330499 | None:intergenic | 25.0% |
! | GATTAACAATTATCAAACTG+TGG | - | chr3.4:24330721-24330740 | MS.gene95515:intron | 25.0% |
! | GTGAATCTAGATTAGAAATT+AGG | + | chr3.4:24330689-24330708 | None:intergenic | 25.0% |
! | TTAGAAACTAAGCAACTAAA+GGG | + | chr3.4:24330407-24330426 | None:intergenic | 25.0% |
!! | AAAGAAAATACCTTTTCACT+AGG | + | chr3.4:24329938-24329957 | None:intergenic | 25.0% |
!! | ATTATTCAAGAAGATTTTGG+TGG | - | chr3.4:24331434-24331453 | MS.gene95515:intron | 25.0% |
!! | TTAATTGGCTTCAACAATAT+GGG | - | chr3.4:24331642-24331661 | MS.gene95515:CDS | 25.0% |
!! | TTTAATTGGCTTCAACAATA+TGG | - | chr3.4:24331641-24331660 | MS.gene95515:CDS | 25.0% |
!!! | AGTGAAAAGGTATTTTCTTT+CGG | - | chr3.4:24329938-24329957 | MS.gene95515:CDS | 25.0% |
!!! | CAAACTTTTCCATTTTTTGT+TGG | - | chr3.4:24331516-24331535 | MS.gene95515:CDS | 25.0% |
!!! | TCTTTTTCATCTCAATCTTT+TGG | + | chr3.4:24329799-24329818 | None:intergenic | 25.0% |
!!! | TTCTTAGTCTTAGGATTATT+GGG | - | chr3.4:24330607-24330626 | MS.gene95515:intron | 25.0% |
!!! | TTTTAGGAATGAATATATGG+TGG | - | chr3.4:24330178-24330197 | MS.gene95515:intron | 25.0% |
AAGCAACTAAAGGGATAAAA+CGG | + | chr3.4:24330398-24330417 | None:intergenic | 30.0% | |
AGTAATCATGTCAGTGAAAT+AGG | - | chr3.4:24330919-24330938 | MS.gene95515:intron | 30.0% | |
ATGTTGCAACCTCATTTAAT+TGG | - | chr3.4:24331627-24331646 | MS.gene95515:CDS | 30.0% | |
ATTAAATGAGGTTGCAACAT+AGG | + | chr3.4:24331627-24331646 | None:intergenic | 30.0% | |
ATTAGGGTTACATGGAAATT+AGG | + | chr3.4:24330672-24330691 | None:intergenic | 30.0% | |
ATTGTTAATCCACGTTAAGA+CGG | + | chr3.4:24330711-24330730 | None:intergenic | 30.0% | |
CAATAATAATAAAGGGCCTT+AGG | + | chr3.4:24331096-24331115 | None:intergenic | 30.0% | |
CGCTTTATGAATTGATGTTT+GGG | + | chr3.4:24330786-24330805 | None:intergenic | 30.0% | |
CTTACTACTATTACTTCGAT+AGG | - | chr3.4:24331220-24331239 | MS.gene95515:intron | 30.0% | |
CTTAGAAACTAAGCAACTAA+AGG | + | chr3.4:24330408-24330427 | None:intergenic | 30.0% | |
GATTAGAAATTAGGGTTACA+TGG | + | chr3.4:24330680-24330699 | None:intergenic | 30.0% | |
TAATCTATGACTCATCACTA+CGG | + | chr3.4:24330051-24330070 | None:intergenic | 30.0% | |
TCATAGATTGCTATCTCTTT+GGG | - | chr3.4:24329981-24330000 | MS.gene95515:CDS | 30.0% | |
TCGCTTTATGAATTGATGTT+TGG | + | chr3.4:24330787-24330806 | None:intergenic | 30.0% | |
TTAAATGAGGTTGCAACATA+GGG | + | chr3.4:24331626-24331645 | None:intergenic | 30.0% | |
TTAGGGTTACATGGAAATTA+GGG | + | chr3.4:24330671-24330690 | None:intergenic | 30.0% | |
TTGTTGAAGCCAATTAAATG+AGG | + | chr3.4:24331639-24331658 | None:intergenic | 30.0% | |
! | ACACACTAATTTCTAAAGAC+CGG | + | chr3.4:24331007-24331026 | None:intergenic | 30.0% |
! | GAGAGAAAGTTGATTAGAAA+GGG | + | chr3.4:24331140-24331159 | None:intergenic | 30.0% |
!! | AAAGGATGATTGTTTTATGG+TGG | + | chr3.4:24330462-24330481 | None:intergenic | 30.0% |
!! | CTTCTTAGTCTTAGGATTAT+TGG | - | chr3.4:24330606-24330625 | MS.gene95515:intron | 30.0% |
!! | GGTAAAGGATGATTGTTTTA+TGG | + | chr3.4:24330465-24330484 | None:intergenic | 30.0% |
!! | TCTTAGTCTTAGGATTATTG+GGG | - | chr3.4:24330608-24330627 | MS.gene95515:intron | 30.0% |
!!! | GGTTTAGACATGTTTTGTTT+AGG | + | chr3.4:24330650-24330669 | None:intergenic | 30.0% |
AAGATGAACCAATGATCCTA+AGG | - | chr3.4:24331077-24331096 | MS.gene95515:intron | 35.0% | |
ATCAATTCATAAAGCGAGAG+CGG | - | chr3.4:24330790-24330809 | MS.gene95515:intron | 35.0% | |
CATAGATTGCTATCTCTTTG+GGG | - | chr3.4:24329982-24330001 | MS.gene95515:CDS | 35.0% | |
GATTACTAGAAGATGCATAG+AGG | + | chr3.4:24330906-24330925 | None:intergenic | 35.0% | |
GATTCAAATCAACAACACAC+CGG | - | chr3.4:24331305-24331324 | MS.gene95515:intron | 35.0% | |
GTCATAGATTGCTATCTCTT+TGG | - | chr3.4:24329980-24329999 | MS.gene95515:CDS | 35.0% | |
TAGCACCATAGAATTCATTG+AGG | - | chr3.4:24330021-24330040 | MS.gene95515:CDS | 35.0% | |
TCCGATTAATGGGATGAATA+GGG | - | chr3.4:24331401-24331420 | MS.gene95515:intron | 35.0% | |
TCTATGACCGTATCAACATT+TGG | + | chr3.4:24329968-24329987 | None:intergenic | 35.0% | |
TGTATTCTCACCTAGTGAAA+AGG | - | chr3.4:24329925-24329944 | MS.gene95515:CDS | 35.0% | |
TTGTTGCTCATCATGTTGAT+AGG | - | chr3.4:24331469-24331488 | MS.gene95515:intron | 35.0% | |
! | AGGAATGAATATATGGTGGA+AGG | - | chr3.4:24330182-24330201 | MS.gene95515:intron | 35.0% |
! | GGAGAGAAAGTTGATTAGAA+AGG | + | chr3.4:24331141-24331160 | None:intergenic | 35.0% |
! | TGAATTGAGTCTTTTGTGCA+AGG | - | chr3.4:24331350-24331369 | MS.gene95515:intron | 35.0% |
! | TGAATTGATGTTTGGGATGA+TGG | + | chr3.4:24330779-24330798 | None:intergenic | 35.0% |
! | TGAGTAGACTTCTTAGTCTT+AGG | - | chr3.4:24330598-24330617 | MS.gene95515:intron | 35.0% |
!! | ATCTCAGTTTGTTGAGGATT+TGG | + | chr3.4:24331579-24331598 | None:intergenic | 35.0% |
!! | GAAAACATCTCAGTTTGTTG+AGG | + | chr3.4:24331585-24331604 | None:intergenic | 35.0% |
!! | GTTTAGGTTTTGTCAAGTGA+AGG | - | chr3.4:24331044-24331063 | MS.gene95515:intron | 35.0% |
!!! | ACTCTTTTGCTGCTTTTCTT+CGG | - | chr3.4:24330346-24330365 | MS.gene95515:intron | 35.0% |
!!! | TCTATGGTGCTATTGTTTTG+CGG | + | chr3.4:24330013-24330032 | None:intergenic | 35.0% |
AAAACGGTAAAGCTGCAACA+GGG | + | chr3.4:24330382-24330401 | None:intergenic | 40.0% | |
AACATTGAGCTCACTCACTT+TGG | + | chr3.4:24331280-24331299 | None:intergenic | 40.0% | |
ACTCATGTTCATCGTAGACA+TGG | + | chr3.4:24330579-24330598 | None:intergenic | 40.0% | |
AGAAAGGGTTTGATTGCTGA+AGG | + | chr3.4:24331125-24331144 | None:intergenic | 40.0% | |
AGCAACATCTACACCACAAA+GGG | + | chr3.4:24329900-24329919 | None:intergenic | 40.0% | |
AGCGCAAGAATACGAAGATA+CGG | - | chr3.4:24330243-24330262 | MS.gene95515:intron | 40.0% | |
ATAAAGGGCCTTAGGATCAT+TGG | + | chr3.4:24331088-24331107 | None:intergenic | 40.0% | |
CGGTCATCCAAATGTTGATA+CGG | - | chr3.4:24329958-24329977 | MS.gene95515:CDS | 40.0% | |
GCCCTATTCATCCCATTAAT+CGG | + | chr3.4:24331405-24331424 | None:intergenic | 40.0% | |
GGAGGAAGAAGAGAGAAATA+CGG | + | chr3.4:24330558-24330577 | None:intergenic | 40.0% | |
GTCCGATTAATGGGATGAAT+AGG | - | chr3.4:24331400-24331419 | MS.gene95515:intron | 40.0% | |
GTGAGCCTCAATGAATTCTA+TGG | + | chr3.4:24330029-24330048 | None:intergenic | 40.0% | |
GTTGAGGATTTGGCTGATAA+TGG | + | chr3.4:24331569-24331588 | None:intergenic | 40.0% | |
TAAAACGGTAAAGCTGCAAC+AGG | + | chr3.4:24330383-24330402 | None:intergenic | 40.0% | |
TAAATTGACCAACTCCCTAG+CGG | - | chr3.4:24331185-24331204 | MS.gene95515:intron | 40.0% | |
TCATGTCAGTGAAATAGGCT+TGG | - | chr3.4:24330924-24330943 | MS.gene95515:intron | 40.0% | |
TGCTAGAAGTAAACTCTCAC+CGG | - | chr3.4:24330948-24330967 | MS.gene95515:intron | 40.0% | |
! | ATAATGGAGAGGGATGTTAG+AGG | + | chr3.4:24331553-24331572 | None:intergenic | 40.0% |
! | ATTGGCTTCAACAATATGGG+AGG | - | chr3.4:24331645-24331664 | MS.gene95515:CDS | 40.0% |
! | GTTGATAGGAGTGCAATTCA+GGG | - | chr3.4:24331483-24331502 | MS.gene95515:intron | 40.0% |
! | TGTTGATAGGAGTGCAATTC+AGG | - | chr3.4:24331482-24331501 | MS.gene95515:intron | 40.0% |
!! | AAAGCAGCAAAAGAGTGTTC+TGG | + | chr3.4:24330342-24330361 | None:intergenic | 40.0% |
!! | AAGCAGCAAAAGAGTGTTCT+GGG | + | chr3.4:24330341-24330360 | None:intergenic | 40.0% |
!! | GATTTGGCTGATAATGGAGA+GGG | + | chr3.4:24331563-24331582 | None:intergenic | 40.0% |
!! | GTTCAAGGCTCAATTTTGGT+GGG | - | chr3.4:24331374-24331393 | MS.gene95515:intron | 40.0% |
!!! | CTCTTTTGCTGCTTTTCTTC+GGG | - | chr3.4:24330347-24330366 | MS.gene95515:intron | 40.0% |
AAAGCTGCAACAGGGTAACT+TGG | + | chr3.4:24330374-24330393 | None:intergenic | 45.0% | |
AACTCTCACCGGACTTTCAT+CGG | - | chr3.4:24330959-24330978 | MS.gene95515:intron | 45.0% | |
AAGCTGCAACAGGGTAACTT+GGG | + | chr3.4:24330373-24330392 | None:intergenic | 45.0% | |
AATATGGGAGGAGGAGGATA+TGG | - | chr3.4:24331657-24331676 | MS.gene95515:CDS | 45.0% | |
AATCAACAACACACCGGATG+AGG | - | chr3.4:24331311-24331330 | MS.gene95515:intron | 45.0% | |
ACTTTCATCGGAAAGGTGAG+GGG | - | chr3.4:24330971-24330990 | MS.gene95515:intron | 45.0% | |
CATGTTCATCGTAGACATGG+AGG | + | chr3.4:24330576-24330595 | None:intergenic | 45.0% | |
CGCAAGAATACGAAGATACG+GGG | - | chr3.4:24330245-24330264 | MS.gene95515:intron | 45.0% | |
CTAGATTCACCGTCTTAACG+TGG | - | chr3.4:24330699-24330718 | MS.gene95515:intron | 45.0% | |
GACTTTCATCGGAAAGGTGA+GGG | - | chr3.4:24330970-24330989 | MS.gene95515:intron | 45.0% | |
GAGCAACATCTACACCACAA+AGG | + | chr3.4:24329901-24329920 | None:intergenic | 45.0% | |
GCGCAAGAATACGAAGATAC+GGG | - | chr3.4:24330244-24330263 | MS.gene95515:intron | 45.0% | |
TCAAACTGTGGAAGCGAAAG+CGG | - | chr3.4:24330733-24330752 | MS.gene95515:intron | 45.0% | |
TCACCTTTCCGATGAAAGTC+CGG | + | chr3.4:24330970-24330989 | None:intergenic | 45.0% | |
TGCCTTGGAGCAAAAGAAAG+AGG | - | chr3.4:24330205-24330224 | MS.gene95515:intron | 45.0% | |
TGGAGCAAAAGAAAGAGGAC+TGG | - | chr3.4:24330210-24330229 | MS.gene95515:intron | 45.0% | |
TTCAACAATATGGGAGGAGG+AGG | - | chr3.4:24331651-24331670 | MS.gene95515:CDS | 45.0% | |
! | AGGCGTTCAAGGCTCAATTT+TGG | - | chr3.4:24331370-24331389 | MS.gene95515:intron | 45.0% |
! | AGTGAGTTTTGCTCCCTTTG+TGG | - | chr3.4:24329884-24329903 | MS.gene95515:CDS | 45.0% |
! | CCATGATTTTCCTCCTCATC+CGG | + | chr3.4:24331327-24331346 | None:intergenic | 45.0% |
! | CGTTCAAGGCTCAATTTTGG+TGG | - | chr3.4:24331373-24331392 | MS.gene95515:intron | 45.0% |
! | GTCCTCTTTCTTTTGCTCCA+AGG | + | chr3.4:24330210-24330229 | None:intergenic | 45.0% |
!! | AAGTAGAGTATCGTTCCGCT+AGG | + | chr3.4:24331203-24331222 | None:intergenic | 45.0% |
!! | ACTTTCTCAAAGCGTCGTAG+TGG | - | chr3.4:24329845-24329864 | MS.gene95515:CDS | 45.0% |
!! | AGCAGCAAAAGAGTGTTCTG+GGG | + | chr3.4:24330340-24330359 | None:intergenic | 45.0% |
!! | AGTAGAGTATCGTTCCGCTA+GGG | + | chr3.4:24331202-24331221 | None:intergenic | 45.0% |
!! | ATATATGGTGGAAGGTGCCT+TGG | - | chr3.4:24330190-24330209 | MS.gene95515:intron | 45.0% |
!! | CTTTCTCAAAGCGTCGTAGT+GGG | - | chr3.4:24329846-24329865 | MS.gene95515:CDS | 45.0% |
!! | GACGCTTTGAGAAAGTCACT+TGG | + | chr3.4:24329841-24329860 | None:intergenic | 45.0% |
!! | GCTTTGAGAAAGTCACTTGG+AGG | + | chr3.4:24329838-24329857 | None:intergenic | 45.0% |
!! | GGATTTGGCTGATAATGGAG+AGG | + | chr3.4:24331564-24331583 | None:intergenic | 45.0% |
!! | TCTTTTGTGCAAGGCGTTCA+AGG | - | chr3.4:24331359-24331378 | MS.gene95515:intron | 45.0% |
!!! | ATGGTGCTATTGTTTTGCGG+TGG | + | chr3.4:24330010-24330029 | None:intergenic | 45.0% |
!!! | TGGTGCTATTGTTTTGCGGT+GGG | + | chr3.4:24330009-24330028 | None:intergenic | 45.0% |
ATTCCCCCAACTCAGAAGCT+TGG | - | chr3.4:24330277-24330296 | MS.gene95515:intron | 50.0% | |
CCGGATGAGGAGGAAAATCA+TGG | - | chr3.4:24331324-24331343 | MS.gene95515:intron | 50.0% | |
GGACTTTCATCGGAAAGGTG+AGG | - | chr3.4:24330969-24330988 | MS.gene95515:intron | 50.0% | |
GGCTTCAACAATATGGGAGG+AGG | - | chr3.4:24331648-24331667 | MS.gene95515:CDS | 50.0% | |
TCACCGGACTTTCATCGGAA+AGG | - | chr3.4:24330964-24330983 | MS.gene95515:intron | 50.0% | |
TCACTTTGGCGCTACGTGAT+AGG | + | chr3.4:24331266-24331285 | None:intergenic | 50.0% | |
! | GGTGGGCTTGTCCGATTAAT+GGG | - | chr3.4:24331391-24331410 | MS.gene95515:intron | 50.0% |
!! | CAAAAGAGTGTTCTGGGGAC+GGG | + | chr3.4:24330335-24330354 | None:intergenic | 50.0% |
!! | GCAAAAGAGTGTTCTGGGGA+CGG | + | chr3.4:24330336-24330355 | None:intergenic | 50.0% |
!! | TGGTGGGCTTGTCCGATTAA+TGG | - | chr3.4:24331390-24331409 | MS.gene95515:intron | 50.0% |
AACTGTGGAAGCGAAAGCGG+AGG | - | chr3.4:24330736-24330755 | MS.gene95515:intron | 55.0% | |
ACTGTGGAAGCGAAAGCGGA+GGG | - | chr3.4:24330737-24330756 | MS.gene95515:intron | 55.0% | |
ATCGGAAAGGTGAGGGGCTA+AGG | - | chr3.4:24330977-24330996 | MS.gene95515:intron | 55.0% | |
CAACAACACACCGGATGAGG+AGG | - | chr3.4:24331314-24331333 | MS.gene95515:intron | 55.0% | |
CCCAACTCAGAAGCTTGGCA+CGG | - | chr3.4:24330282-24330301 | MS.gene95515:intron | 55.0% | |
CCGTGCCAAGCTTCTGAGTT+GGG | + | chr3.4:24330285-24330304 | None:intergenic | 55.0% | |
CGAGAGCGGAGTCTTGATGT+TGG | - | chr3.4:24330804-24330823 | MS.gene95515:intron | 55.0% | |
CGTGCCAAGCTTCTGAGTTG+GGG | + | chr3.4:24330284-24330303 | None:intergenic | 55.0% | |
GTATCGTTCCGCTAGGGAGT+TGG | + | chr3.4:24331196-24331215 | None:intergenic | 55.0% | |
TCAAGCGGAAGGAAAGGTCG+TGG | - | chr3.4:24329770-24329789 | MS.gene95515:CDS | 55.0% | |
TCGGAAAGGTGAGGGGCTAA+GGG | - | chr3.4:24330978-24330997 | MS.gene95515:intron | 55.0% | |
! | GTGCCAAGCTTCTGAGTTGG+GGG | + | chr3.4:24330283-24330302 | None:intergenic | 55.0% |
AGGACCAAACCGCAAGCGCA+CGG | + | chr3.4:24331246-24331265 | None:intergenic | 60.0% | |
GCCGTGCCAAGCTTCTGAGT+TGG | + | chr3.4:24330286-24330305 | None:intergenic | 60.0% | |
GGTGAGGGGCTAAGGGAAAC+CGG | - | chr3.4:24330985-24331004 | MS.gene95515:intron | 60.0% | |
TTCGATAGGCCGTGCGCTTG+CGG | - | chr3.4:24331234-24331253 | MS.gene95515:intron | 60.0% | |
!! | AGCGTCGTAGTGGGCTCTTC+AGG | - | chr3.4:24329855-24329874 | MS.gene95515:CDS | 60.0% |
GCCCGTGCCAACATGTGGCA+CGG | - | chr3.4:24330304-24330323 | MS.gene95515:intron | 65.0% | |
GCCGTGCCACATGTTGGCAC+GGG | + | chr3.4:24330308-24330327 | None:intergenic | 65.0% | |
GGCCGTGCCACATGTTGGCA+CGG | + | chr3.4:24330309-24330328 | None:intergenic | 65.0% | |
TAGGCCGTGCGCTTGCGGTT+TGG | - | chr3.4:24331239-24331258 | MS.gene95515:intron | 65.0% | |
!! | GAGTGTTCTGGGGACGGGCA+CGG | + | chr3.4:24330330-24330349 | None:intergenic | 65.0% |
GCACGGCCCGTGCCAACATG+TGG | - | chr3.4:24330299-24330318 | MS.gene95515:intron | 70.0% | |
GGCACGGCCGTGCCACATGT+TGG | + | chr3.4:24330314-24330333 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 24329767 | 24331686 | 24329767 | ID=MS.gene95515 |
chr3.4 | mRNA | 24329767 | 24331686 | 24329767 | ID=MS.gene95515.t1;Parent=MS.gene95515 |
chr3.4 | exon | 24331507 | 24331686 | 24331507 | ID=MS.gene95515.t1.exon1;Parent=MS.gene95515.t1 |
chr3.4 | CDS | 24331507 | 24331686 | 24331507 | ID=cds.MS.gene95515.t1;Parent=MS.gene95515.t1 |
chr3.4 | exon | 24329767 | 24330162 | 24329767 | ID=MS.gene95515.t1.exon2;Parent=MS.gene95515.t1 |
chr3.4 | CDS | 24329767 | 24330162 | 24329767 | ID=cds.MS.gene95515.t1;Parent=MS.gene95515.t1 |
Gene Sequence |
Protein sequence |